BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012800
         (456 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 487

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/456 (66%), Positives = 376/456 (82%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  +LSTRLLNI + + CKA  L KAE++IIDGIRLGVLPDVVTYN LIDAY +FVSF+A
Sbjct: 31  MVRRLSTRLLNISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNA 90

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++LNRMREA ISPDVVTYNSLIAGA RN LL  SL+L DEML MGI PDVWSYN+LMH
Sbjct: 91  AYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMH 150

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C F+LGK +EAN V + +    L+PC  TFNIM+NGLCKN +T NAL +FR L++HGFVP
Sbjct: 151 CFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVP 210

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +L+TYNILI GLCK  RLR AR +LKEL  SG+ PNAITYTT+MK CFR+R++K GLEIL
Sbjct: 211 QLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEIL 270

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  KGYTFDGF YCTV+   +K GRL+EAT+YM QM+ +G++ D+ SYNTLINLYCK+
Sbjct: 271 QEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQ 330

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G LEAAY LLDE+EK+G +CD+YTHTILI+ +CKAGNI GAR H+++MN +GFDS L A 
Sbjct: 331 GNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVAL 390

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC+VD L K+G+IDHA+ +FESM+++DSFTYSS+VHNLCK  R   ASKLLLSCL+SG++
Sbjct: 391 NCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGMK 450

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           IL SAQ+ V+ GLR+SG ++EA+K++SKI++A++ H
Sbjct: 451 ILPSAQRVVISGLRYSGFQKEARKLKSKIKLARMLH 486


>gi|225454807|ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/456 (65%), Positives = 371/456 (81%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + ST+LLNIC+ + CK  +LEKAEA++IDGIRLG+LPDVVTYN L+ AY +FV  DA
Sbjct: 1   MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++++RM+EAGISPDV+TYNSLIA AT+  LLS SLDL +EML  GI PDVWSYNSLMH
Sbjct: 61  AYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMH 120

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C F+LGKPDEANRVFQD+I  +L P ++TFNIM+NGLC N YT  AL ++R LQ+ GFVP
Sbjct: 121 CFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVP 180

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ELVTYNILI GLCK+ +L  AR IL+ELG+SG+ P+AITYTT+MKCCFR+R+++ G EI 
Sbjct: 181 ELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIF 240

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S MK KGY FD F YC VIAA  K GRL+EA D MEQM    + LDIVSYNT++NLYC+ 
Sbjct: 241 SEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRN 300

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GKLEA Y LLDE+E+ G ECD+YTHTILIDGLCKAGN++GA  HL+ M K+GFDS L A 
Sbjct: 301 GKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQ 360

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC++D L K G++DHAI +F SMEVKDSFTYSSMVHNLCKA+R   AS+LLL+CL+ G++
Sbjct: 361 NCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMK 420

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           IL++ Q++V+DGL +SG   EA++++SKIR+A+I H
Sbjct: 421 ILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILH 456


>gi|147832566|emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
          Length = 457

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 286/432 (66%), Positives = 352/432 (81%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + ST+LLNIC+ + CK  +LEKAEA++IDGIRLG+LPDVVTYN L+ AY +FV  DA
Sbjct: 1   MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++++RM+EAGISPDV+TYNSLIA AT+  LLS SLDL +EML  GI PDVWSYNSLMH
Sbjct: 61  AYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMH 120

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C F+LGKPDEANRVFQD+I  +L P ++TFNIM+NGLC N YT  AL ++R LQ+ GFVP
Sbjct: 121 CFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVP 180

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ELVTYNILI GLCK+ +L  AR IL+ELG+SG+ P+AITYTT+MKCCFR+R+++ G EI 
Sbjct: 181 ELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIF 240

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S MK KGY FD F YC VIAA  K GRL+EA D MEQM    + LDIVSYNT++NLYC+ 
Sbjct: 241 SEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRN 300

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GKLEA Y LLDE+E+ G ECD+YTHTILIDGLCKAGN++GA  HL+ M K+GFDS L A 
Sbjct: 301 GKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQ 360

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC++D L K G++DHAI +F SMEVKDSFTYSSMVHNLCKA+R   AS+LLL+CL+ G++
Sbjct: 361 NCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMK 420

Query: 421 ILKSAQKAVVDG 432
           IL++ Q++V+DG
Sbjct: 421 ILRANQRSVIDG 432



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 4/273 (1%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NI I  LCK G+L  A  ++ +    G  P+ +TY T++    R         ++  MK 
Sbjct: 11  NICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIHRMKE 70

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + D   Y ++IAA  K   L  + D  E+M+  G++ D+ SYN+L++ + K GK + 
Sbjct: 71  AGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDE 130

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +  ++          T  I+I+GLC  G    A     Y+ + GF   L  YN +++
Sbjct: 131 ANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILIN 190

Query: 366 RLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L K  K++ A  +     ES  V D+ TY++++    ++++     ++       G   
Sbjct: 191 GLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAF 250

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              +  AV+  L  +G   EA  I  ++  + I
Sbjct: 251 DAFSYCAVIAALTKTGRLEEANDIMEQMARSDI 283



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 39/330 (11%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           T   NI +  LCK    + A  +     + G +P++VTYN L+    +   +  A  ++ 
Sbjct: 7   TKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDAAYSVIH 66

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            + ++G +P+ ITY +++    +       L++   M R G   D + Y +++  F K+G
Sbjct: 67  RMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHCFFKLG 126

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +  EA    + ++   +     ++N +IN  C  G    A  L   +++QGF  +  T+ 
Sbjct: 127 KPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYN 186

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIG--------------------FDSNLE-------- 358
           ILI+GLCK+  +  AR  L  + + G                    F+   E        
Sbjct: 187 ILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSK 246

Query: 359 -------AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSA 407
                  +Y  ++  L K G+++ A ++ E M   D      +Y+++++  C+  +L + 
Sbjct: 247 GYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEAT 306

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            KLL    + G+   +     ++DGL  +G
Sbjct: 307 YKLLDEIEEHGLECDEYTHTILIDGLCKAG 336


>gi|449467965|ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449468117|ref|XP_004151768.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449532400|ref|XP_004173169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 286/453 (63%), Positives = 355/453 (78%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  K ST+ LNICV +FCK+ +++KAEA+IIDGIR+GVLPDVVTYN LID YC+F   DA
Sbjct: 1   MVCKYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++L RMREAGISPDV+TYNSLIAGATRN  L  SLDL +EML+ GI PD+WSYN+LMH
Sbjct: 61  AYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C F LGKPDEA RVF+D+I  DL+P   TFN M+NGLCK+ YT NA+ +FR LQ+HGF+P
Sbjct: 121 CFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIP 180

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +LVTYNILI GLCK  RLR A  +L E  DSG  PNA+TYTT+MK CFR+R+Y+ G EI 
Sbjct: 181 QLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIF 240

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S MK KGY FDGF YCTV  AF+K+GR +EA   MEQM+ + V +DI  YNT INLYCKE
Sbjct: 241 SKMKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKE 300

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GKLEAAY L DE+E +G ECD YTH+I+ +GLC+ GNI+GA  HL  +   GF SNL A 
Sbjct: 301 GKLEAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVAL 360

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC++DRL K G+ID AI +FESME +DSFTY+S+VHNLCKA+R   ASKLL+SC + G++
Sbjct: 361 NCLIDRLCKAGQIDRAIRLFESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGMK 420

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           +LK+ ++AV+DGL  SG   EA+K++ K+R+A+
Sbjct: 421 VLKATRRAVIDGLCSSGFTSEARKLKFKLRLAR 453


>gi|224089585|ref|XP_002308767.1| predicted protein [Populus trichocarpa]
 gi|222854743|gb|EEE92290.1| predicted protein [Populus trichocarpa]
          Length = 454

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 282/452 (62%), Positives = 364/452 (80%), Gaps = 3/452 (0%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + STR LNIC+ +FCKA  L++AE +IIDG+RLGVLPDVVTYN LI+AY +FVSFDA
Sbjct: 1   MVSRSSTRFLNICIASFCKAKHLQRAETVIIDGVRLGVLPDVVTYNTLINAYSRFVSFDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++L+RM+EA I PD+VTYNSLIAGA R+ LLS  +DL +EMLE+GI PD+WSYN+LMH
Sbjct: 61  AYSVLDRMKEASIKPDIVTYNSLIAGAMRHCLLSNCMDLFEEMLELGIKPDIWSYNTLMH 120

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C F+L +PD+A RVF D+I   L+P  AT+N MLNGLCK  + +NAL +FR L++HGFVP
Sbjct: 121 CFFKLERPDDAYRVFTDIILCYLSPSQATYNTMLNGLCKCGFVENALMLFRKLKRHGFVP 180

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            LVTYNILI GLCKA +L+TARW+LKELG SG  PN ITYTT+M+CCFR+R+++ GLEI 
Sbjct: 181 SLVTYNILINGLCKAWKLKTARWMLKELGASGLVPNVITYTTVMRCCFRSRRFEQGLEIF 240

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  KGYTFDGF YCTV+ A VK  R++EA+ YME+MV   + LD+ SYNTLINLYCK 
Sbjct: 241 EEMIDKGYTFDGFAYCTVVGALVKTCRIEEASHYMERMVNTDIGLDMASYNTLINLYCKG 300

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GKLE A+ +LD+MEK+GFE D+YT+TIL++GLC+ G+++GA   +EYMN  GF+SNL A 
Sbjct: 301 GKLEMAHGVLDKMEKEGFERDEYTNTILMNGLCEEGDVEGA---MEYMNVAGFNSNLVAL 357

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           N +VDR  K  +ID+A  +F+SM+++DSFTYSS++HNLCK  R   ASKLLLSC++S  R
Sbjct: 358 NTMVDRWCKADQIDYAFKIFDSMDMRDSFTYSSLIHNLCKVGRFRCASKLLLSCVRSRTR 417

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           IL SA++AV D LRHSG +REAK+++S+I++A
Sbjct: 418 ILPSAKRAVFDCLRHSGHQREAKRLKSEIKLA 449


>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/451 (61%), Positives = 359/451 (79%), Gaps = 3/451 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LST+LLNI V + CKA ++  AE  I+DGIRLGVLPDVVTYN LIDAYC+F + D  Y++
Sbjct: 11  LSTKLLNITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSV 70

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L RM +AGI PDVV++N+LI+GA R SL S SLDL DEML+ GI PD WS+N LM+CLFQ
Sbjct: 71  LARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQ 130

Query: 125 LGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           LGKPDEANRVF++++  D + P  AT+NIM+NGLCKN Y  NAL +FR LQ+HGFVP+++
Sbjct: 131 LGKPDEANRVFKEIVLRDEVHP--ATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVL 188

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI GLCKA RL+ AR +LKE G++G+ PNA+TYTT+M CCFR R ++ GLEILS M
Sbjct: 189 TYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEM 248

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +  G+TFDGF YCTVIAA +K GR++EA + +E MV+ GV+ D+VSYNTLINLYC++G+L
Sbjct: 249 RSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRL 308

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LLDE+E +G ECD+YTHTI++DGLCKAGN  GA+ HL YMN +GF SNL A+NC 
Sbjct: 309 DDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCF 368

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
           +D LGK G IDHA+ +FE MEVKDSFTY+ +VHNLC+A+R   ASK+L+SCLK G ++L+
Sbjct: 369 LDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCRARRFLCASKVLVSCLKCGYQVLR 428

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           + Q+AV+ GLR  G   EA+K++  IR+A+ 
Sbjct: 429 ATQRAVIVGLRSIGYANEARKVKLTIRLAQF 459


>gi|297737331|emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 283/456 (62%), Positives = 355/456 (77%), Gaps = 16/456 (3%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + ST+LLNIC+ + CK  +LEKAEA++IDGIRLG+LPDVVTYN L+ AY +FV  DA
Sbjct: 1   MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGIDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++++RM+EAGISPDV+TYNSLIA AT+  LLS SLDL +EML  GI PDVWSYNSLMH
Sbjct: 61  AYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMH 120

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            +                I  +L P ++TFNIM+NGLC N YT  AL ++R LQ+ GFVP
Sbjct: 121 YI----------------ILTNLLPSSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVP 164

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ELVTYNILI GLCK+ +L  AR IL+ELG+SG+ P+AITYTT+MKCCFR+R+++ G EI 
Sbjct: 165 ELVTYNILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIF 224

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S MK KGY FD F YC VIAA  K GRL+EA D MEQM    + LDIVSYNT++NLYC+ 
Sbjct: 225 SEMKSKGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRN 284

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GKLEA Y LLDE+E+ G ECD+YTHTILIDGLCKAGN++GA  HL+ M K+GFDS L A 
Sbjct: 285 GKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLVAQ 344

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC++D L K G++DHAI +F SMEVKDSFTYSSMVHNLCKA+R   AS+LLL+CL+ G++
Sbjct: 345 NCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGGMK 404

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           IL++ Q++V+DGL +SG   EA++++SKIR+A+I H
Sbjct: 405 ILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILH 440


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 268/457 (58%), Positives = 358/457 (78%), Gaps = 1/457 (0%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  +LST+ +NI + T CK+N++ KAE ++IDGI+LG+ PD++TYN LID YC+FV  DA
Sbjct: 1   MITRLSTKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y ILNRM+EAGI+PDVV+YNSL +GA R  LL  SLDL DEML+ GI PDVWSYN LMH
Sbjct: 61  AYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMH 120

Query: 121 CLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           C F+LGKP+EAN VF+D+   G++ P  A++N+M+NGLCKN Y +NAL +FR L++ GFV
Sbjct: 121 CYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFV 180

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           PE++TYN +I GLCKA RL  AR +L E  D G  PNAITYTT+MKCCFR  + + GLEI
Sbjct: 181 PEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEI 240

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           LS M+RKG+TFDGF YCTV+AA VK GR++EA +  E+M+++G+  D+ SYNT+INL+C+
Sbjct: 241 LSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCR 300

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G+ + A  L+DE+EKQG +CD+YTHTI+I GLCK GN +GA  HL+YMN +GF  NL A
Sbjct: 301 QGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVA 360

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +N I+D LGK G ID A+ VF+SMEVKDSFTY+S++HNLC+AK+   ASKLL++ ++ G 
Sbjct: 361 FNSILDCLGKAGDIDKAVKVFDSMEVKDSFTYTSLLHNLCRAKKFRIASKLLVASIEDGF 420

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           +IL++ Q+AV+DGL  SG   EA+K++ KI+ A++ H
Sbjct: 421 QILRATQRAVIDGLTTSGLVYEARKVKLKIQRARLVH 457


>gi|449451938|ref|XP_004143717.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 460

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 236/460 (51%), Positives = 325/460 (70%), Gaps = 8/460 (1%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  K ST+LL ICV +FCK+++ +KAE  I D IRLGV+PD++TYN+LI+ YCQF   DA
Sbjct: 1   MVSKYSTKLLTICVASFCKSHQFQKAEIAIKDAIRLGVVPDILTYNILINGYCQFSDMDA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++ ++MR+AGI+P+V  Y SL+A A+RNS L   L+L  EML++GI PDVWSY +L H
Sbjct: 61  AYSVFHKMRDAGITPNVFIYTSLMAAASRNSSLEQCLNLFHEMLQLGITPDVWSYTTLTH 120

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C  ++GKPDEAN +F D I  D +P  ATF++M+ G C   YT NA+ +FR LQ HG VP
Sbjct: 121 CFLKVGKPDEANSIFLDFILKDHSPNPATFDVMIFGFCSCGYTSNAITLFRNLQSHGLVP 180

Query: 181 ELVTYNILIKGLCKAGRLRT-------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           + VTY+IL+ GLCKA RL         A  +  E  DSG  P++ TY  +MKCCF+ R+Y
Sbjct: 181 KFVTYDILLTGLCKAARLNVSVSMFNEAMSMFNEAIDSGFEPDSTTYIALMKCCFKFREY 240

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           + G EI   MK KG  F+GFGY T I A +++GRL+EA  +M +M+ +GV  ++V YNT+
Sbjct: 241 QHGFEIFFEMKNKGLAFNGFGYYTAIGALLRLGRLEEAKFFMVEMIKNGVVFNLVFYNTV 300

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +NLYCK GKLEAA+ +LD++E +G +C+ YTH I+ DGLCK GN +GAR HL Y+   GF
Sbjct: 301 VNLYCKHGKLEAAHKMLDKIESRGLQCNDYTHAIITDGLCKVGNFEGARRHLNYIYPTGF 360

Query: 354 -DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
            +SN+ A +C++DRL K G+ID A+ +FE ME KD + Y+S++HNLCKA+R   ASKLLL
Sbjct: 361 TNSNVVASSCLIDRLCKAGQIDQAMQLFELMETKDPYVYTSLMHNLCKARRFLCASKLLL 420

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            CL+SG+ + +S Q AV+ GL   G   EA+K++  I ++
Sbjct: 421 DCLRSGISVFRSTQCAVIFGLCSFGFTSEARKLKPFIHLS 460


>gi|297800292|ref|XP_002868030.1| hypothetical protein ARALYDRAFT_914908 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313866|gb|EFH44289.1| hypothetical protein ARALYDRAFT_914908 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/456 (53%), Positives = 327/456 (71%), Gaps = 2/456 (0%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  LSTRLLNICV + CK  +LEKAE +IIDGIRLGV PDVVTYN LI  YC+FV  + G
Sbjct: 8   FTGLSTRLLNICVDSLCKFRKLEKAETLIIDGIRLGVAPDVVTYNTLISGYCRFVGIEEG 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMR+AGI PDV TYNSLIAGA R  +L   L L DEMLE GI PD+WSYN+LM C
Sbjct: 68  YAVTLRMRDAGIRPDVATYNSLIAGAARRLMLDRVLYLFDEMLEWGIYPDLWSYNTLMCC 127

Query: 122 LFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LGK +EA RV ++D+    L+P   T+N++L+ LCK  Y DNAL +F+ +Q   F P
Sbjct: 128 YFKLGKHEEAFRVLYKDLQLAGLSPGPDTYNVLLDALCKCGYIDNALELFKEMQSK-FKP 186

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ TA+W+L EL  SG+ PNA+TYTTI+K   + R+ + GL++ 
Sbjct: 187 ELMTYNILINGLCKSRRVGTAKWMLTELKRSGYTPNAVTYTTILKLYIKTRRIRRGLQLF 246

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             MKR+GYT+DG+ Y  V++A +K GR KEA +YM+++V  G + DIVSYNTL+NLY K+
Sbjct: 247 LEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKD 306

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G L+A   LL E+E++G + D+YTHTI+++GL + G  + A  H   M ++G   NL   
Sbjct: 307 GNLDAVDDLLGEIERKGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTC 366

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC+VD L K G +D A+  FESMEVKD +TY+S+VHNLCK  R   ASKLLLSC   G++
Sbjct: 367 NCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIK 426

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           I  SA++AV+ GLR SGC  EA+K ++K+++  + +
Sbjct: 427 IPTSARRAVLSGLRMSGCYGEARKAKAKMKLTLVGN 462


>gi|68566156|sp|P0C043.1|PP318_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At4g17915
          Length = 463

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 245/456 (53%), Positives = 327/456 (71%), Gaps = 2/456 (0%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  LSTRLLNICV + CK  +LEKAE++IIDGIRLGV PDVVTYN LI  YC+FV  +  
Sbjct: 8   FTGLSTRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEA 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMR+AGI PDV TYNSLIAGA R  +L   L L DEMLE GI PD+WSYN+LM C
Sbjct: 68  YAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCC 127

Query: 122 LFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LGK +EA RV ++D+    L P   T+N++L+ LCK  Y DNAL +F+ +Q   F P
Sbjct: 128 YFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKP 186

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ TA+W+L EL  SG+ PNA+TYTTI+K  F+ R+ + GL++ 
Sbjct: 187 ELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLF 246

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             MKR+GYT+DG+ Y  V++A +K GR KEA +YM+++V  G + DIVSYNTL+NLY K+
Sbjct: 247 LEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKD 306

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G L+A   LL E+E++G + D+YTHTI+++GL + G  + A  H   M ++G   NL   
Sbjct: 307 GNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTC 366

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC+VD L K G +D A+  FESMEVKD +TY+S+VHNLCK  R   ASKLLLSC   G++
Sbjct: 367 NCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIK 426

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           I  SA++AV+ GLR SGC  EA+K ++++++  + +
Sbjct: 427 IPTSARRAVLSGLRMSGCYGEARKAKAEMKLTLVGN 462


>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 460

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 227/451 (50%), Positives = 315/451 (69%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LSTRL+N+C+   C+   + +AE++++D IRLG+ PDVVTYN L+ A+C+    DAG+ 
Sbjct: 7   QLSTRLMNVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFA 66

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+RMREAG+SPD +TYNSLIAGA R  L   +LDL DEML+ G+ PD WSYN+LMHCLF
Sbjct: 67  VLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLF 126

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G P++A RVF DM    + PC  T+N +L+GL +  +  NA RMFR LQ+ G    +V
Sbjct: 127 RSGHPEDAYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAYRMFRYLQRTGLPVGIV 186

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN +I GLCK+G++  AR +L+ELG + HAPN +TYTT+MKCCF+  ++  GLE   ++
Sbjct: 187 TYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFLSL 246

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              GY  D F YCTVI+A VK GR++EA  Y E M+  G +LD   YNTLI L CKEGKL
Sbjct: 247 LEGGYIPDLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDSACYNTLIYLRCKEGKL 306

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A+ LL  ME+ G E D+YT +IL++GLCK G+ + A   L YM     +SN+ AYNC+
Sbjct: 307 DDAFELLSMMEEGGLESDEYTFSILVNGLCKMGHFEAAHKQLCYMEIRDMESNVIAYNCL 366

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
           VD L K  ++D AI +  +M++KD FTY+S+VH LCK  R   ASK L  CL+ G  IL 
Sbjct: 367 VDALCKSDEVDAAIKLLHNMKLKDDFTYTSLVHGLCKVGRYHMASKFLRICLREGNSILA 426

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           SA++AV+ GLR +G + + +K+++ +RMA++
Sbjct: 427 SAKRAVIAGLRSAGFQNDVRKVRAALRMARL 457


>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Brachypodium distachyon]
          Length = 460

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/452 (50%), Positives = 313/452 (69%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            +LSTRL+N+C+   C++  LE+AE+++ID I LG+ PDVVTYN L+ A+C+    DAG+
Sbjct: 6   AQLSTRLMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGF 65

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L RMREAG+ P+ VTYNSLI  A+R  L   +LDL DEML  GI PD WSYN LMHCL
Sbjct: 66  AVLRRMREAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCL 125

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           F+ G P++A RVF DM    +TPCT T+N +L+GL K  +  NA RMFR LQ+ G    +
Sbjct: 126 FRSGHPEDAYRVFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAYRMFRYLQRVGLPVGI 185

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN +I GLC++G++  AR IL+ELG + H PNA+TYTT+MKCCFR  ++  GLE   +
Sbjct: 186 VTYNTMINGLCRSGKVGYARMILRELGRTEHTPNAVTYTTVMKCCFRYGRFDQGLETFLS 245

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   G+  D F YCTVI+A VK GR++EA  Y E M+  G +LD   YNTLI+L C+EGK
Sbjct: 246 LLEGGHIPDVFPYCTVISALVKKGRVEEANAYSELMIQSGSRLDTACYNTLIHLRCQEGK 305

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+ A+ LL  ME+ G E D+YT +IL++GLCK G+I+ A   L YM     +SN+ AYNC
Sbjct: 306 LDDAFELLSMMEEGGLESDEYTFSILVNGLCKLGHIEAAEKQLCYMEMRDMESNVVAYNC 365

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           +VD L K  ++D AI +   M++KD FTY+S+VH LC+  R   ASK L  CL+ G  +L
Sbjct: 366 LVDALCKSDQVDAAIRLLHDMKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLREGNNVL 425

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            SA++AV+ GLR +G + + +K++S + MA++
Sbjct: 426 ASAKRAVIAGLRSAGFKNDVRKVRSALYMARL 457


>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
 gi|238006488|gb|ACR34279.1| unknown [Zea mays]
 gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
          Length = 462

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/450 (50%), Positives = 310/450 (68%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LSTRL+N+ + + C+   L++AE++++D IRLG+ PDVVTYN L+ AYC+    DAG  +
Sbjct: 10  LSTRLMNVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAV 69

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++RMREAG+ PD VTYNSLI GA R+ L   +LDL DEML  G+ PD WSYN+LMHCLF+
Sbjct: 70  VHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFR 129

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G P+ A RVF DM    + PC  T+N +L+GL K  +  NA RMFR LQ+ G    +VT
Sbjct: 130 SGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVT 189

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I GLCK+G++  AR +LKELG + HAPNA+TYTT+MKCCFR  +++ GLE   ++ 
Sbjct: 190 YNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLL 249

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             GY  D F Y TVI+A VK GR++EA  Y E M+  G  LD   YNTLI+L C+EGK+ 
Sbjct: 250 EGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIN 309

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LL+ ME+ G E D+YT +IL++GLCK G I+ A   +  M  +G  SN+ AYNC++
Sbjct: 310 DAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCLI 369

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           D L K  ++D AI +  SM++KD F+Y+S+VH LCK  R   ASK L  CL  G  +L S
Sbjct: 370 DALCKCHEVDAAIKILHSMKLKDDFSYTSLVHGLCKVGRYHMASKFLRICLHEGNNVLAS 429

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           A++AV+ GLR +G + + +K++S + MA++
Sbjct: 430 AKRAVISGLRSAGFKNDLRKVRSALYMARL 459



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 4/282 (1%)

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G L   T   N+ L  LC+  + D A  +     + G  P++VTYN L+   C+   L  
Sbjct: 6   GHLALSTRLMNVGLASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDA 65

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              ++  + ++G  P+A+TY +++    R+      L++   M R G   D + Y  ++ 
Sbjct: 66  GLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMH 125

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              + G  + A      M   GV     +YNTL++   K G +  A+ +   +++ G   
Sbjct: 126 CLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPV 185

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
              T+  +I+GLCK+G +  AR+ L+ + +     N   Y  ++    + G+ +  +  F
Sbjct: 186 GIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETF 245

Query: 381 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            S+     + D+F Y++++  L K  R+  A+      ++SG
Sbjct: 246 LSLLEGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSG 287


>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
 gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
          Length = 462

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/450 (49%), Positives = 308/450 (68%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LSTRL+N+ +   C+   L++AE++++D IRLG+ PDVVTYN L+ A+C+    DAG  +
Sbjct: 10  LSTRLMNVGLAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAV 69

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++RMREAG+ PD VTYNSLI GA R+ L   +LDL DEML  G+ PD WSYN+LMHCLF+
Sbjct: 70  VHRMREAGVRPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFR 129

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G P+ A RVF DM    + PC  T+N +L+GL K  +  NA RMFR LQ+ G    +VT
Sbjct: 130 SGHPEHAYRVFADMADKGVAPCATTYNTLLDGLFKAGHATNAYRMFRYLQRAGLPVGIVT 189

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I GLCK+G++  AR +LKELG + HAPNA+TYTT+MKCCFR  +++ GLE   ++ 
Sbjct: 190 YNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLL 249

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             GY  D F Y TVI+A VK GR++EA  Y E M+  G  LD   YNTLI+L C+EGK++
Sbjct: 250 EGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKID 309

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LL+ ME+ G E D+YT +IL++GLCK G I+ A   +  M  +   SN+ AYNC++
Sbjct: 310 DAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMDMQSNVVAYNCLI 369

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           D L K  ++D AI +  SM +KD FTY+S+VH LCK  R   ASK L  CL  G  +L S
Sbjct: 370 DALCKCHEVDAAIKILHSMRLKDDFTYTSLVHGLCKVGRYHMASKFLRICLHEGNNVLAS 429

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           A++AV+ GLR +G + + +K++S + MA++
Sbjct: 430 AKRAVISGLRSAGFKNDLRKVRSALYMARL 459


>gi|115449175|ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
 gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa Japonica Group]
 gi|215704904|dbj|BAG94932.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 473

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/450 (49%), Positives = 306/450 (68%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TRLLN+C+   C+   L  AE++++D IRLG+ PDVVTYN L+ A+C+    +AG  +
Sbjct: 21  LPTRLLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVV 80

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           + RMREAG+ PD VTYNSLIAGA R  L   +LDL DEML  GI PD WSYN LMHCLF+
Sbjct: 81  MGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFR 140

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G P++A RVF DM    + PC  T+N +L+G+ +  Y  NA RMFR LQ+ G    +VT
Sbjct: 141 SGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVT 200

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I GLC +G++  AR +L+ELG + HAPN ITYT +MKCCF+  +++ GL+   ++ 
Sbjct: 201 YNTMINGLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLL 260

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +GY  D + YCTVI+A VK GRL EA +Y + M+ +G +LD V YNTLI++ C+EGKL+
Sbjct: 261 DRGYISDVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLD 320

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L+  ME  G E D+YT  IL++GLCK G+I+ A   L YM   G  SN+ AYNC+V
Sbjct: 321 DAFELVSMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLV 380

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           D L K  ++D AI + + M++KD FTY+S+VH LC+  R   ASK L  CL  G  +L S
Sbjct: 381 DALCKFQEVDAAIRLLQCMKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLHEGNNVLAS 440

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           A++AV+ GLR SG + + +K++  + MAK+
Sbjct: 441 AKRAVIAGLRSSGFKNDLRKVRVALNMAKL 470


>gi|47497141|dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
 gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
          Length = 462

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/450 (49%), Positives = 306/450 (68%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TRLLN+C+   C+   L  AE++++D IRLG+ PDVVTYN L+ A+C+    +AG  +
Sbjct: 10  LPTRLLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVV 69

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           + RMREAG+ PD VTYNSLIAGA R  L   +LDL DEML  GI PD WSYN LMHCLF+
Sbjct: 70  MGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFR 129

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G P++A RVF DM    + PC  T+N +L+G+ +  Y  NA RMFR LQ+ G    +VT
Sbjct: 130 SGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVT 189

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I GLC +G++  AR +L+ELG + HAPN ITYT +MKCCF+  +++ GL+   ++ 
Sbjct: 190 YNTMINGLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLL 249

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +GY  D + YCTVI+A VK GRL EA +Y + M+ +G +LD V YNTLI++ C+EGKL+
Sbjct: 250 DRGYISDVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLD 309

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L+  ME  G E D+YT  IL++GLCK G+I+ A   L YM   G  SN+ AYNC+V
Sbjct: 310 DAFELVSMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLV 369

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           D L K  ++D AI + + M++KD FTY+S+VH LC+  R   ASK L  CL  G  +L S
Sbjct: 370 DALCKFQEVDAAIRLLQCMKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLHEGNNVLAS 429

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           A++AV+ GLR SG + + +K++  + MAK+
Sbjct: 430 AKRAVIAGLRSSGFKNDLRKVRVALNMAKL 459


>gi|125541439|gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
          Length = 502

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/453 (49%), Positives = 308/453 (67%), Gaps = 1/453 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TRLLN+C+   C+   L  AE++++D IRLG+ PDVVTYN L+ A+C+    +AG  +
Sbjct: 10  LPTRLLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAV 69

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           + RMREAG+ PD VTYNSLIAGA R  L   +LDL DEML  GI PD WSYN LMHCLF+
Sbjct: 70  MGRMREAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLMHCLFR 129

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G P++A RVF DM    + PC  T+N +L+G+ +  Y  NA RMFR LQ+ G    +VT
Sbjct: 130 SGHPEDAYRVFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAYRMFRYLQRAGLPVSIVT 189

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I GLC +G++  AR +L+ELG + HAPN ITYT +MKCCF+  +++ GL+   ++ 
Sbjct: 190 YNTMINGLCSSGKVGYARMVLRELGRTDHAPNIITYTAVMKCCFKYGRFEQGLDTFLSLL 249

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +GY  D + YCTVI+A VK GRL EA +Y + M+ +G +LD V YNTLI++ C+EGKL+
Sbjct: 250 DRGYISDVYPYCTVISALVKKGRLGEANNYCDLMLQNGSRLDSVCYNTLIHMRCQEGKLD 309

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L+  ME  G E D+YT  IL++GLCK G+I+ A   L YM   G  SN+ AYNC+V
Sbjct: 310 DAFELVSMMEDGGLESDEYTFAILVNGLCKMGHIEAAEKQLFYMEIKGMQSNVVAYNCLV 369

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           D L K  ++D AI + + M++KD FTY+S+VH LC+  R   ASK L  CL+ G  +L S
Sbjct: 370 DALCKFQEVDAAIRLLQCMKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLREGNNVLAS 429

Query: 425 AQKAVVDGLRHSGCRREAKKIQS-KIRMAKISH 456
           A++AV+ GLR SG + + +K++S K +  KI H
Sbjct: 430 AKRAVIAGLRSSGFKNDLRKVRSVKPKRNKIKH 462


>gi|297794571|ref|XP_002865170.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311005|gb|EFH41429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 468

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/453 (50%), Positives = 316/453 (69%), Gaps = 3/453 (0%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  +ST+LLNI V + CK   LEKAE ++IDGIRLGVLPDV+TYN LI  Y +F+  D  
Sbjct: 8   FPGISTKLLNISVDSLCKFRNLEKAETLLIDGIRLGVLPDVITYNTLIKGYSRFIGIDEA 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMREAGI PDV TYNSLI+GA +N +L+  L L DEML  G+ PD+WSYN+LM C
Sbjct: 68  YAVTRRMREAGIEPDVATYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127

Query: 122 LFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LGK  EA R+  +D+    L P   T+NI+L+ LCK+ +TDNA+ +F+ L K    P
Sbjct: 128 YFRLGKHGEAFRILHEDIRLAGLVPGVDTYNILLDALCKSGHTDNAIELFKHL-KSRVKP 186

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ +  W+L+EL  +G+ PNA+TYTT++K  F+ ++ + GLE+ 
Sbjct: 187 ELMTYNILINGLCKSRRVGSVNWMLRELRKAGYTPNAVTYTTMLKMYFKTKRIEKGLELF 246

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-LDIVSYNTLINLYCK 299
             MK++GYTFDG+  C V++A +K GR +EA   M ++V  G +  DIVSYNTL+N+Y K
Sbjct: 247 LKMKKEGYTFDGYANCAVVSALIKTGRAEEAYGCMNELVRSGTRSQDIVSYNTLLNMYFK 306

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G L+A   LL+E+E +G + D YTHTI+++GL K G+  GA  HL  + ++G   ++  
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLKIGHTGGAEKHLARIGEMGMQPSIAT 366

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK  RL  ASKLLLSC   G+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +I  SA++AV+ GLR +   + A+K   KI+ A
Sbjct: 427 KIPSSARRAVLSGLRETVSHQAARKTHFKIKAA 459


>gi|18422700|ref|NP_568665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635755|sp|Q56XR6.2|PP421_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46680
 gi|332008030|gb|AED95413.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 468

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/453 (49%), Positives = 316/453 (69%), Gaps = 3/453 (0%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  +ST+LLNI V + CK   LE+AE ++IDGIRLGVLPDV+TYN LI  Y +F+  D  
Sbjct: 8   FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMREAGI PDV TYNSLI+GA +N +L+  L L DEML  G+ PD+WSYN+LM C
Sbjct: 68  YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127

Query: 122 LFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LG+  EA ++  +D+    L P   T+NI+L+ LCK+ +TDNA+ +F+ L K    P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKP 186

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ +  W+++EL  SG+ PNA+TYTT++K  F+ ++ + GL++ 
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-LDIVSYNTLINLYCK 299
             MK++GYTFDGF  C V++A +K GR +EA + M ++V  G +  DIVSYNTL+NLY K
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G L+A   LL+E+E +G + D YTHTI+++GL   GN  GA  HL  + ++G   ++  
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK  RL  ASKLLLSC   G+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +I  SA++AV+ G+R +   + A+K   KI+ A
Sbjct: 427 KIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459


>gi|21618238|gb|AAM67288.1| unknown [Arabidopsis thaliana]
          Length = 463

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/453 (49%), Positives = 316/453 (69%), Gaps = 3/453 (0%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  +ST+LLNI V + CK   LE+AE ++IDGIRLGVLPDV+TYN LI  Y +F+  D  
Sbjct: 3   FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 62

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMREAGI PDV TYNSLI+GA +N +L+  L L DEML  G+ PD+WSYN+LM C
Sbjct: 63  YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 122

Query: 122 LFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LG+  EA ++  +D+    L P   T+NI+L+ LCK+ +TDNA+ +F+ L K    P
Sbjct: 123 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKP 181

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ +  W+++EL  SG+ PNA+TYTT++K  F+ ++ + GL++ 
Sbjct: 182 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 241

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-LDIVSYNTLINLYCK 299
             MK++GYTFDGF  C V++A +K GR +EA + M ++V  G +  DIVSYNTL+NLY K
Sbjct: 242 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 301

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G L+A   LL+E+E +G + D YTHTI+++GL   GN  GA  HL  + ++G   ++  
Sbjct: 302 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 361

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK  RL  ASKLLLSC   G+
Sbjct: 362 CNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 421

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +I  SA++AV+ G+R +   + A+K   KI+ A
Sbjct: 422 KIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 454


>gi|62320562|dbj|BAD95174.1| hypothetical protein [Arabidopsis thaliana]
          Length = 468

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/453 (49%), Positives = 316/453 (69%), Gaps = 3/453 (0%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  +ST+LLNI V + CK   LE+AE ++IDGIRLGVLPDV+TYN LI  Y +F+  D  
Sbjct: 8   FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMREAGI PDV TYNSLI+GA +N +L+  L L DEML  G+ PD+WSYN+LM C
Sbjct: 68  YAVTRRMREAGIEPDVTTYNSLISGAAKNLVLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127

Query: 122 LFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LG+  EA ++  +D+    L P   T+NI+L+ LCK+ +TDNA+ +F+ L K    P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKP 186

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ +  W+++EL  SG+ PNA+TYTT++K  F+ ++ + GL++ 
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-LDIVSYNTLINLYCK 299
             MK++GYTFDGF  C V++A +K GR +EA + M ++V  G +  DIVSYNTL+NLY K
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G L+A   LL+E+E +G + D YTHTI+++GL   GN  GA  HL  + ++G   ++  
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK  RL  ASKLLLSC   G+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +I  SA++AV+ G+R +   + A+K   KI+ A
Sbjct: 427 KIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459


>gi|2894600|emb|CAA17134.1| putative protein [Arabidopsis thaliana]
 gi|7268543|emb|CAB78793.1| putative protein [Arabidopsis thaliana]
          Length = 1208

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/454 (49%), Positives = 301/454 (66%), Gaps = 38/454 (8%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  LSTRLLNICV + CK  +LEKAE++IIDGIRLGV PDVVTYN LI  YC+FV  +  
Sbjct: 8   FTGLSTRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEA 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMR+AGI PDV TYNSLIAGA R  +L   L L DEMLE GI PD+WSYN+LM C
Sbjct: 68  YAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCC 127

Query: 122 LFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+LGK +EA RV ++D+    L P                  DNAL +F+ +Q   F P
Sbjct: 128 YFKLGKHEEAFRVLYKDLQLAGLNP------------------DNALELFKEMQSR-FKP 168

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           EL+TYNILI GLCK+ R+ TA+W+L EL  SG+ PNA+TYTTI+K  F+ R+ + GL++ 
Sbjct: 169 ELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLF 228

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             MKR+GYT+DG+ Y  V++A +K GR KEA +YM+++V                   K+
Sbjct: 229 LEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVR------------------KD 270

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G L+A   LL E+E++G + D+YTHTI+++GL + G  + A  H   M ++G   NL   
Sbjct: 271 GNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTC 330

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           NC+VD L K G +D A+  FESMEVKD +TY+S+VHNLCK  R   ASKLLLSC   G++
Sbjct: 331 NCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIK 390

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           I  SA++AV+ GLR SGC  EA+K ++++++  +
Sbjct: 391 IPTSARRAVLSGLRMSGCYGEARKAKAEMKLTLV 424


>gi|9758504|dbj|BAB08912.1| unnamed protein product [Arabidopsis thaliana]
          Length = 431

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/451 (45%), Positives = 290/451 (64%), Gaps = 36/451 (7%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  +ST+LLNI V + CK   LE+AE ++IDGIRLGVLPDV+TYN LI  Y +F+  D  
Sbjct: 8   FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           Y +  RMREAGI PDV TYNSLI+GA +N +L+  L L DEML  G+ PD+WSYN+LM C
Sbjct: 68  YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
            F+LG+  EA ++  +             +I L G     +TDNA+ +F+ L K    PE
Sbjct: 128 YFKLGRHGEAFKILHE-------------DIHLAG----GHTDNAIELFKHL-KSRVKPE 169

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYNILI GLCK+ R+ +  W+++EL  SG+ PNA+TYTT++K  F+ ++ + GL++  
Sbjct: 170 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 229

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            MK++GYTFDGF  C V++A +K GR +EA + M ++V                    +G
Sbjct: 230 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS------------------DG 271

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+A   LL+E+E +G + D YTHTI+++GL   GN  GA  HL  + ++G   ++   N
Sbjct: 272 NLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCN 331

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           C++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK  RL  ASKLLLSC   G++I
Sbjct: 332 CLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 391

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
             SA++AV+ G+R +   + A+K   KI+ A
Sbjct: 392 PSSARRAVLSGIRETVSYQAARKTHIKIKAA 422


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 234/457 (51%), Gaps = 40/457 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L++A  I    ++ G +PDVVTYN LI+ +C+    D    IL RM    + PD
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 77  VVTYNSLIAGATRNSL---------------------------------LSCSLDLLDEM 103
           VVTYNSL+ G  +N                                   L  +  LL++M
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +  G  PD+ SYN+L+H L +     EA ++F  ++     P   T+NI+++GL K    
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A  +F GL KHG  P+ +TY + I GLCKAGR+  A  +LK++ + G  P+ +++  +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    + ++      +LS M+ KG + +   + T+I    + G+ K+A    ++M+  GV
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429

Query: 284 QLDIVSYNTLINLYCK---EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +  +V+YN L++  CK   EG+++ A  L D M ++G   D  T++ LIDGL KAG +  
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 489

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           AR  L  M   G   N+  YN ++  L    K+D A+ +F +M     V D+ TY +++ 
Sbjct: 490 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            LCK + +  A  L    L++GV        +++DGL
Sbjct: 550 ALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586



 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 233/445 (52%), Gaps = 20/445 (4%)

Query: 10  LNICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + I + +  K+ ++EKA    E +++ G     L D+ T+N+ I   C+        T+ 
Sbjct: 19  VGILLRSLLKSGKIEKAHRFVEQLLVKG-----LCDISTFNIYISGLCRASRIGDAQTVF 73

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + MR+ G  P+ +TYN+L++G      +S +  L + M++ G  PDV +YN+L+H   ++
Sbjct: 74  DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK DEA ++F   +     P   T+N ++NG CK    D A R+ + +     VP++VTY
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMK 244
           N L+ GLCK GR+  AR ++    D G +PN ITY+T++   C   R+ +   ++L  M 
Sbjct: 194 NSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMV 250

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y  +I    +   + EA      ++  G + ++ +YN LI+   KE ++ 
Sbjct: 251 LNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVN 310

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L   + K G E D  T+T+ IDGLCKAG ++ A L L+ M++ G   ++ ++N ++
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 370

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L K+ ++D A  +   ME K    ++ ++++++   C+A +   A       LK GV+
Sbjct: 371 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 430

Query: 421 ILKSAQKAVVDGL---RHSGCRREA 442
                   +VDGL   R  G  +EA
Sbjct: 431 PTVVTYNILVDGLCKARQEGRIKEA 455



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 3/311 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G  P+V TYN+LID   +    +  + + + + + G+ PD +TY   I G  +   +
Sbjct: 285 LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L +L +M E G  PDV S+N++++ L +  + DEA  +   M     +P   +FN +
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA---GRLRTARWILKELGD 210
           + G C+      A+  F+ + K G  P +VTYNIL+ GLCKA   GR++ A  +   + +
Sbjct: 405 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ +TY+ ++    +  K      +L AM+ KG   + + Y ++I+    + ++ E
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A +    MV  G   D ++Y T+I+  CK+  ++ A  L D   + G       +  LID
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584

Query: 331 GLCKAGNIKGA 341
           GLC    +  A
Sbjct: 585 GLCAVARVDEA 595



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 152/303 (50%), Gaps = 3/303 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +    K +R+ +A  +    ++ G+ PD +TY + ID  C+    +    +L  M E
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVV++N++I G  +   +  +  LL  M   G  P+  S+N+L+    + GK  +
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---DNALRMFRGLQKHGFVPELVTYNI 187
           A   F++M+   + P   T+NI+++GLCK R       A+ +F  + + G VP++VTY+ 
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL KAG+L  AR +L  +   G  PN  TY +++       K    LE+  AM  KG
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y T+I+A  K   + +A    +  +  GV      Y +LI+  C   +++ A 
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596

Query: 308 LLL 310
            LL
Sbjct: 597 KLL 599



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 3/263 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R+E A  ++ D    G +PDVV++N +I+  C+    D    +L+ M   G SP+
Sbjct: 338 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPN 397

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL---FQLGKPDEANR 133
            +++N+LI G  R      ++    EML+ G+ P V +YN L+  L    Q G+  EA  
Sbjct: 398 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 457

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  MI     P   T++ +++GL K    D+A R+   ++  G +P + TYN LI GLC
Sbjct: 458 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 517

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
              ++  A  +   + + G  P+ ITY TI+    +       L +       G      
Sbjct: 518 GLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSG 577

Query: 254 GYCTVIAAFVKIGRLKEATDYME 276
            Y ++I     + R+ EA   ++
Sbjct: 578 MYFSLIDGLCAVARVDEALKLLQ 600



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 3/200 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---QFVSFDAGYTILN 66
            N  +C  C+A + +KA     + ++ GV P VVTYN+L+D  C   Q        T+ +
Sbjct: 401 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M E G  PDVVTY++LI G  +   L  +  LL  M   G  P+V++YNSL+  L  L 
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K DEA  +F  M+     P T T+  +++ LCK    D AL +F G  + G VP    Y 
Sbjct: 521 KVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580

Query: 187 ILIKGLCKAGRLRTARWILK 206
            LI GLC   R+  A  +L+
Sbjct: 581 SLIDGLCAVARVDEALKLLQ 600



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 5/168 (2%)

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D  +   L+    K GK+E A+  ++++  +G  CD  T  I I GLC+A  I  A+   
Sbjct: 15  DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVF 73

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 401
           + M K GF  N   YN ++  L   G++  A  ++E M       D  TY++++H  CK 
Sbjct: 74  DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +L  A K+    +K G         A+++G   +    EA++I  ++
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  234 bits (596), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 229/434 (52%), Gaps = 15/434 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA++ +KA  ++ + +  GV PD VT+N ++D  C+   F+  +++L  M E
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P   TYN+LI+G  +   +  + DL+DE +  G  PDV +Y+ L   L + G+ DE
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M     TP   T+N +++GLCK   T+ A  +   L   GFVP++VTY I++ 
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVD 444

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK GRL  A  +++ +   G  P+ ITYT +M+   R  +      I   M  K  T 
Sbjct: 445 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 504

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ----LDIVSYNTLINLYCKEGKLEAA 306
           D   Y +++  + K  R KEA     Q V DG++    +D+  YN L++ YCKEG+L+  
Sbjct: 505 DALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDV--YNALMDGYCKEGRLDEI 557

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + ++M  +G   +  T+ I++DGLCK G +  A   LE M+  G   ++ +YN I+D 
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K  K   A  V + M       D+ TY++++   CK +R   A  +L + +K+GV   
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677

Query: 423 KSAQKAVVDGLRHS 436
                 ++ GL  +
Sbjct: 678 NVTYNTLISGLSQT 691



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 224/442 (50%), Gaps = 11/442 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  RL+ A  I     R    PD + YN +I  +C+    D     L  M E  ++PD
Sbjct: 205 FCKTGRLKDALEIF----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPD 260

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYN LI G  + S    + ++L EM++ G+ PD  ++NS+M  L + GK + A+ +  
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   +  P   T+N +++GLCK +  D A  +       GFVP++VTY+IL  GLCK G
Sbjct: 321 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRG 380

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  ++KE+   G  PN +TY T++    +  K +   E+L ++   G+  D   Y 
Sbjct: 381 RIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYT 440

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K GRL +A   +E M+  G    +++Y  L+   C+ G+++ A+ +  EM  +
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   +  L++G CK+   K A+   + ++ I     ++ YN ++D   K+G++D  
Sbjct: 501 DCTADALAYVSLVNGYCKSSRTKEAQ---KVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 557

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            NVFE M     V +  TY+ ++  LCK  ++  A   L S   +G      +   ++DG
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
           L  +   +EA+++  ++  A I
Sbjct: 618 LFKASKPKEARQVLDQMIQAGI 639



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 212/439 (48%), Gaps = 41/439 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA++ EKA  ++   +  G +PDVVTY +++D  C+    D    ++  M +
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 464

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY--------------- 115
            G +P V+TY +L+ G  R   +  +  +  EM+      D  +Y               
Sbjct: 465 RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKE 524

Query: 116 -----------------NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
                            N+LM    + G+ DE   VF+DM C    P   T+NI+++GLC
Sbjct: 525 AQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 584

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K+   D A      +   G VP++V+YNI+I GL KA + + AR +L ++  +G  P+A+
Sbjct: 585 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 644

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY T+M    +  ++   + IL  M + G   D   Y T+I+   +  RL +A + M +M
Sbjct: 645 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704

Query: 279 VTDGVQLDI-VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           + +G  +    +YNT+I+  CKEG L+ A LL+D M   G E +  T+ I ID LCK G 
Sbjct: 705 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 764

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK----DSFTYS 392
           +  A   L  M+ +    +  +Y  ++  L K  ++D A  +   M  VK     S T++
Sbjct: 765 LDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821

Query: 393 SMVHNLCKAKRLPSASKLL 411
            ++    K KRL  A  LL
Sbjct: 822 LLIDAFTKTKRLDEALTLL 840



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 205/413 (49%), Gaps = 10/413 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST   N  + T  +    ++  A+    +  G  PD  TY+++I + CQ    D  +T
Sbjct: 122 KHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFT 181

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCL 122
           +L++ +  G  P+V  Y  L     +   L  +L++        IP PD  +YN+++H  
Sbjct: 182 MLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF-----RNIPSPDAIAYNAIIHGH 236

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +    D A    ++M    + P   T+NI+++GLCK   TD A  M   +   G  P+ 
Sbjct: 237 CRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDT 296

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT+N ++ GLCKAG+   A  +L  + +    P+  TY T++    + +      +++  
Sbjct: 297 VTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDE 356

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
               G+  D   Y  +     K GR+ EA + +++M   G   ++V+YNTLI+  CK  K
Sbjct: 357 FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASK 416

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            E AY LL+ +   GF  D  T+TI++DGLCK G +  A   +E M K G   ++  Y  
Sbjct: 417 TEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 476

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +++ L + G++D A ++F+ M  K    D+  Y S+V+  CK+ R   A K++
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 173/372 (46%), Gaps = 46/372 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  RL++   +  D    G +P++ TYN+++D  C+    D  +  L  M  AG  PD
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN +I G  + S    +  +LD+M++ GIPPD  +YN+LM    +  + D+A  + +
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667

Query: 137 DMICGDLTPCTATFNIMLNGL------------------------------------CKN 160
           +MI   + P   T+N +++GL                                    CK 
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                AL +   +  HG     VTYNI I  LCK GRL  A  +L E+       + ++Y
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSY 784

Query: 221 TTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           TT++    K    +R  KL  E+++    KG       +  +I AF K  RL EA   + 
Sbjct: 785 TTVIIGLCKAEQLDRASKLAREMVAV---KGLCITSHTFNLLIDAFTKTKRLDEALTLLG 841

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV  G    +++YN +I   CK  K++ A+ L DEM  +G      ++T+LI GLC  G
Sbjct: 842 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 901

Query: 337 NIKGARLHLEYM 348
             K A   LE M
Sbjct: 902 RGKEALQVLEEM 913



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 185/407 (45%), Gaps = 44/407 (10%)

Query: 88  TRNSLLSCSLD---------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TRN  L   L+         + + ML+ G  PD ++Y+ ++  L Q+ + D+A  +    
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK----------HG----------- 177
                 P  + + I+    CK     +AL +FR +            HG           
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGAL 246

Query: 178 ----------FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
                       P++ TYNILI GLCKA +   A  +L E+ D G  P+ +T+ +IM   
Sbjct: 247 EFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 306

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            +  K++    +L+ M  +        Y T+I+   K   +  A D +++ V+ G   D+
Sbjct: 307 CKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDV 366

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           V+Y+ L +  CK G+++ A+ L+ EM  +G   +  T+  LIDGLCKA   + A   LE 
Sbjct: 367 VTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLES 426

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           +   GF  ++  Y  IVD L K+G++D A+ + E M          TY++++  LC+  R
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 486

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  A  +    +         A  ++V+G   S   +EA+K+   IR
Sbjct: 487 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 8/337 (2%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G     ++ N  +  L + G  D    +F+ M+     P + T+++++  LC+    D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A  M    +  GF PE+  Y IL +  CK GRL+ A  I + +     +P+AI Y  I+
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI----PSPDAIAYNAII 233

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               R       LE L  M  +    D F Y  +I    K  +  +A++ + +MV  GV 
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D V++N++++  CK GK E A+ LL  M ++       T+  LI GLCK  N+  A+  
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           ++     GF  ++  Y+ + D L K G+ID A  + + M  K    +  TY++++  LCK
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           A +   A +LL S + SG          +VDGL   G
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEG 450



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 4/169 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +   CK  RL++A +++ +   +  L D V+Y  +I   C+    D    + 
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSE---MDTLRDEVSYTTVIIGLCKAEQLDRASKLA 804

Query: 66  NRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             M    G+     T+N LI   T+   L  +L LL  M++ G  P V +YN ++ CL +
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           L K D+A  +F +M    +   + ++ +++ GLC       AL++   +
Sbjct: 865 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 1/121 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +++   N+ +  F K  RL++A  ++   ++ G  P V+TYNM+I   C+    D  + +
Sbjct: 815 ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 874

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLF 123
            + M   GI    V+Y  LI G         +L +L+EM       D   +  +  H  F
Sbjct: 875 FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAPHSQF 934

Query: 124 Q 124
           Q
Sbjct: 935 Q 935


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 228/434 (52%), Gaps = 15/434 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA++ +KA  ++ + +  GV PD VT+N ++D  C+   F+  +++L  M E
Sbjct: 14  NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 73

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P   TYN+LI+G  +   +  +  L+DE +  G  PDV +Y+ L   L + G+ DE
Sbjct: 74  RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 133

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M     TP   T+N +++GLCK   T+ A  +   L   GFVP++VTY I++ 
Sbjct: 134 AFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVD 193

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK GRL  A  +++ +   G  P+ ITYT +M+   R  +      I   M  K  T 
Sbjct: 194 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 253

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ----LDIVSYNTLINLYCKEGKLEAA 306
           D   Y +++  + K  R KEA     Q V DG++    +D+  YN L++ YCKEG+L+  
Sbjct: 254 DALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDV--YNALMDGYCKEGRLDEI 306

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + ++M  +G   +  T+ I++DGLCK G +  A   LE M+  G   ++ +YN I+D 
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366

Query: 367 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K  K   A  V + M       D+ TY++++   CK +R   A  +L + +K+GV   
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426

Query: 423 KSAQKAVVDGLRHS 436
                 ++ GL  +
Sbjct: 427 NVTYNTLISGLSQT 440



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 205/428 (47%), Gaps = 69/428 (16%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA++ EKA  ++   +  G +PDVVTY +++D  C+    D    ++  M + G +P 
Sbjct: 160 LCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 219

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY--------------------- 115
           V+TY +L+ G  R   +  +  +  EM+      D  +Y                     
Sbjct: 220 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 279

Query: 116 -----------NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
                      N+LM    + G+ DE   VF+DM C    P   T+NI+++GLCK+   D
Sbjct: 280 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A      +   G VP++V+YNI+I GL KA + + AR +L ++  +G  P+A+TY T+M
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  ++   + IL  M + G   D   Y T+I+   +  RL +A + M +M+ +G  
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459

Query: 285 LDI-VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +    +YNT+I+  CKEG L+ A LL+D M   G E +  T+ I ID LC          
Sbjct: 460 VSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC---------- 509

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAK 402
                                    K+G++D A ++   M+ ++D  +Y++++  LCKA+
Sbjct: 510 -------------------------KEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAE 544

Query: 403 RLPSASKL 410
           +L  ASKL
Sbjct: 545 QLDRASKL 552



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 203/391 (51%), Gaps = 7/391 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E  ++PDV TYN LI G  + S    + ++L EM++ G+ PD  ++NS+M  L + GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            + A+ +   M   +  P   T+N +++GLCK +  D A  +       GFVP++VTY+I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L  GLCK GR+  A  ++KE+  +G  PN +TY T++    +  K +   E+L  +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D   Y  ++    K GRL +A   +E M+  G    +++Y  L+   C+ G+++ A+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +  EM  +    D   +  L++G CK+   K A+   + ++ I     ++ YN ++D  
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ---KVVDGIRGTPYIDVYNALMDGY 297

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+G++D   NVFE M     V +  TY+ ++  LCK  ++  A   L S   +G     
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            +   ++DGL  +   +EA+++  ++  A I
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGI 388



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 174/372 (46%), Gaps = 46/372 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  RL++   +  D    G +P++ TYN+++D  C+    D  +  L  M  AG  PD
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN +I G  + S    +  +LD+M++ GIPPD  +YN+LM    +  + D+A  + +
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 137 DMICGDLTPCTATFNIMLNGL------------------------------------CKN 160
           +MI   + P   T+N +++GL                                    CK 
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                AL +   +  HG     VTYNI I  LCK GRL  A  +L E+       + ++Y
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSY 533

Query: 221 TTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           TT++    K    +R  KL  E+++    KG       +  +I AF K  RL EA   +E
Sbjct: 534 TTVIIGLCKAEQLDRASKLAREMVAV---KGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV  G    +++YN +I   CK  K++ A+ L DEM  +G      ++T+LI GLC  G
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650

Query: 337 NIKGARLHLEYM 348
             K A   LE M
Sbjct: 651 RGKEALQVLEEM 662



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 40/340 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +    KA++ ++A  ++   I+ G+ PD VTYN L+  +C+   FD    IL  M +
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE------------------------- 105
           AG+ PD VTYN+LI+G ++ + L  + +L+ EML                          
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 106 -----------MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
                       G+  +  +YN  +  L + G+ DEA+ +  +M   D      ++  ++
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVI 537

Query: 155 NGLCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
            GLCK    D A ++ R +    G      T+N+LI    K  RL  A  +L+ +   G 
Sbjct: 538 IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGC 597

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P+ ITY  ++ C  +  K     E+   M  +G       Y  +I      GR KEA  
Sbjct: 598 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQ 657

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +E+M +   ++D +    L      +G+ E A  LL  M
Sbjct: 658 VLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 4/167 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +   CK  RL++A +++ +   +  L D V+Y  +I   C+    D    + 
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSE---MDTLRDEVSYTTVIIGLCKAEQLDRASKLA 553

Query: 66  NRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             M    G+     T+N LI   T+   L  +L LL+ M++ G  P V +YN ++ CL +
Sbjct: 554 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           L K D+A  +F +M    +   + ++ +++ GLC       AL++  
Sbjct: 614 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 660



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +++   N+ +  F K  RL++A  ++   ++ G  P V+TYNM+I   C+    D  + +
Sbjct: 564 ITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWEL 623

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M   GI    V+Y  LI G         +L +L+EM       D      L   L  
Sbjct: 624 FDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRG 683

Query: 125 LGKPDEANRVFQDM 138
            G+ +EA  + + M
Sbjct: 684 QGRGEEAAELLRRM 697


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 227/431 (52%), Gaps = 4/431 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK +++ +A  ++ +    G+ P+VVTY+ +I  +C+    D  Y +  +M E
Sbjct: 46  NVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 105

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++VTYN+L++G  RN L+  + +LLDEM E G+ PD +SY++LM  L + GK D 
Sbjct: 106 NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDM 165

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +VF+D   GD  P    ++ ++ GLCK    D A ++F  ++++   P++VT+  L+ 
Sbjct: 166 ALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMD 225

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  RL+ A+ +L+ + D    PN ITY++++    +  + +   E+   M  +G   
Sbjct: 226 GLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 285

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I  F     +  A   ME+M   G   DI++YNTLI+  CK G+   A  L 
Sbjct: 286 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 345

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M+ +    D  T++ LI G CK   I  AR   + M K     ++  ++ +V+     
Sbjct: 346 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNA 405

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A  + E M   D     +TY+S+V   CK  R+  A ++L    K G +      
Sbjct: 406 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465

Query: 427 KAVVDGLRHSG 437
            A++D    +G
Sbjct: 466 TALIDAFCRAG 476



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 234/441 (53%), Gaps = 6/441 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANRL +A        + G +P+  TYN+LI+ +C+       Y +L  M+E+G++P+
Sbjct: 17  LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 76

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+++I G  R + +  +  L  +M+E G  P++ +YN+L+  L + G  DEA  +  
Sbjct: 77  VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 136

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P   +++ ++ GLCK    D AL++F         P++V Y+ LI GLCK G
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  + +++ ++   P+ +T+T +M    +  + +   ++L  M+ +  T +   Y 
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    K G++++A +  ++M+  G++ ++V+YN+LI+ +C    +++A LL++EM   
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  LIDGLCK G    A      M     + ++  Y+C++    K  +ID A
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +F+ M     + D  T+S++V   C A  +  A +LL   + S          ++VDG
Sbjct: 377 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 436

Query: 433 LRHSGCRREAKKIQSKIRMAK 453
               G   EA+++    RMAK
Sbjct: 437 FCKVGRMVEARRVLK--RMAK 455



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 211/400 (52%), Gaps = 6/400 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +RL++A+ ++         P+V+TY+ LID  C+         +  RM   GI P+
Sbjct: 227 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI G    + +  +L L++EM   G  PD+ +YN+L+  L + G+  EANR+F 
Sbjct: 287 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 346

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM      P   T++ ++ G CK    D A  +F  + K   +P++VT++ L++G C AG
Sbjct: 347 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 406

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +L+E+  S  +P+  TYT+++    +  +      +L  M ++G   +   Y 
Sbjct: 407 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 466

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK- 315
            +I AF + G+   A   +E+MV +GVQ ++++Y +LI  +C  G LE A  +L+ +E+ 
Sbjct: 467 ALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERD 526

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +  + D + + +++DGLC+ G +  A   LE + + G     + Y  ++  L +  ++  
Sbjct: 527 ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 586

Query: 376 AINVFESMEV-----KDSFTYSSMVHNLCKAKRLPSASKL 410
           A+ V E M +      ++  Y +++  L +  R   A+ L
Sbjct: 587 AMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 5/422 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +++ A  +  D       PDVV Y+ LI   C+    D    +  +MRE    PD
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+ +L+ G  +   L  +  +L+ M +    P+V +Y+SL+  L + G+  +A  VF+
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   + P   T+N +++G C     D+AL +   +   G +P+++TYN LI GLCK G
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 336

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +  ++      P+ ITY+ ++    +  +  +   +   M ++    D   + 
Sbjct: 337 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 396

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  +   G + +A   +E+MV      D+ +Y +L++ +CK G++  A  +L  M K+
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 456

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T+T LID  C+AG    A   LE M   G   N+  Y  ++      G ++ A
Sbjct: 457 GCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516

Query: 377 INVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
             + E +E       D F Y  M+  LC+  R+ +A +LL +  +SG         A++ 
Sbjct: 517 RKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 576

Query: 432 GL 433
           GL
Sbjct: 577 GL 578



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 37/334 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  N ++ A  ++ +    G LPD++TYN LID  C+         +   M+    +PD
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY+ LI G  +   +  +  L D+ML+  + PDV ++++L+      G  D+A R+ +
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D +P   T+  +++G CK      A R+ + + K G  P +VTY  LI   C+AG
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476

Query: 197 RLRTARWILKELGDSGHAPNAITYTTI--------------------------------- 223
           +   A  +L+E+  +G  PN ITY ++                                 
Sbjct: 477 KPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAY 536

Query: 224 ---MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-V 279
              M    R  +    LE+L A+K+ G       Y  +I    +   L +A + +E+M +
Sbjct: 537 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 596

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +   + +  +Y  +I    +EG+ E A  L DE+
Sbjct: 597 SRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 11/294 (3%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FG +  +  N  V T       FCK  R++ A  +  D ++  VLPDVVT++ L++ YC
Sbjct: 344 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 403

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                D    +L  M  +  SPDV TY SL+ G  +   +  +  +L  M + G  P+V 
Sbjct: 404 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y +L+    + GKP  A ++ ++M+   + P   T+  ++ G C     + A +M   L
Sbjct: 464 TYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL 523

Query: 174 QK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++      ++  Y +++ GLC+ GR+  A  +L+ +  SG  P    Y  +++   + ++
Sbjct: 524 ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKE 583

Query: 233 YKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +E+L  M   RK    +   Y  VI    + GR +EA    ++++ +  Q
Sbjct: 584 LGKAMEVLEEMTLSRKSRP-NAEAYEAVIQELAREGRHEEANALADELLGNKGQ 636


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 227/431 (52%), Gaps = 4/431 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK +++ +A  ++ +    G+ P+VVTY+ +I  +C+    D  Y +  +M E
Sbjct: 165 NVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 224

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++VTYN+L++G  RN L+  + +LLDEM E G+ PD +SY++LM  L + GK D 
Sbjct: 225 NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDM 284

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +VF+D   GD  P    ++ ++ GLCK    D A ++F  ++++   P++VT+  L+ 
Sbjct: 285 ALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMD 344

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  RL+ A+ +L+ + D    PN ITY++++    +  + +   E+   M  +G   
Sbjct: 345 GLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 404

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I  F     +  A   ME+M   G   DI++YNTLI+  CK G+   A  L 
Sbjct: 405 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 464

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M+ +    D  T++ LI G CK   I  AR   + M K     ++  ++ +V+     
Sbjct: 465 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNA 524

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A  + E M   D     +TY+S+V   CK  R+  A ++L    K G +      
Sbjct: 525 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 584

Query: 427 KAVVDGLRHSG 437
            A++D    +G
Sbjct: 585 TALIDAFCRAG 595



 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 235/441 (53%), Gaps = 6/441 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANRL +A        + G +P+  TYN+LI+ +C+       Y +L  M+E+G++P+
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+++I G  R + +  +  L  +M+E G  P++ +YN+L+  L + G  DEA  +  
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P   +++ ++ GLCK    D AL++F         P++V Y+ LI GLCKAG
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  + +++ ++   P+ +T+T +M    +  + +   ++L  M+ +  T +   Y 
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    K G++++A +  ++M+  G++ ++V+YN+LI+ +C    +++A LL++EM   
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  LIDGLCK G    A      M     + ++  Y+C++    K  +ID A
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +F+ M     + D  T+S++V   C A  +  A +LL   + S          ++VDG
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 555

Query: 433 LRHSGCRREAKKIQSKIRMAK 453
               G   EA+++    RMAK
Sbjct: 556 FCKVGRMVEARRVLK--RMAK 574



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 211/400 (52%), Gaps = 6/400 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +RL++A+ ++         P+V+TY+ LID  C+         +  RM   GI P+
Sbjct: 346 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 405

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI G    + +  +L L++EM   G  PD+ +YN+L+  L + G+  EANR+F 
Sbjct: 406 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFG 465

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM      P   T++ ++ G CK    D A  +F  + K   +P++VT++ L++G C AG
Sbjct: 466 DMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 525

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +L+E+  S  +P+  TYT+++    +  +      +L  M ++G   +   Y 
Sbjct: 526 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 585

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK- 315
            +I AF + G+   A   +E+MV +GVQ ++++Y +LI  +C  G LE A  +L+ +E+ 
Sbjct: 586 ALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERD 645

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +  + D + + +++DGLC+ G +  A   LE + + G     + Y  ++  L +  ++  
Sbjct: 646 ENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 705

Query: 376 AINVFESMEV-----KDSFTYSSMVHNLCKAKRLPSASKL 410
           A+ V E M +      ++  Y +++  L +  R   A+ L
Sbjct: 706 AMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 211/433 (48%), Gaps = 11/433 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A R+++   I+ +G   G+ P+V TY ++I   C+    D    +L  MRE+G  PD  
Sbjct: 36  RARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAA 95

Query: 79  TYNSLIAG--ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            YN +I      RN+  +     LD    M    +V ++  ++  L +  +  EA   F 
Sbjct: 96  IYNFVIHALCKARNTAKA-----LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFA 150

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   T+N+++NG CK      A  + + +++ G  P +VTY+ +I G C+  
Sbjct: 151 KMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQT 210

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++ TA  + +++ ++G  PN +TY T++    RN       E+L  M+ +G   D F Y 
Sbjct: 211 KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYD 270

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++A   K G++  A    E         D+V+Y+TLI   CK G+L+ A  L ++M + 
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             E D  T T L+DGLCK   ++ A+  LE M       N+  Y+ ++D L K G++  A
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDA 390

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             VF+ M V+    +  TY+S++H  C    + SA  L+     +G          ++DG
Sbjct: 391 QEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450

Query: 433 LRHSGCRREAKKI 445
           L  +G   EA ++
Sbjct: 451 LCKTGRAPEANRL 463



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 5/422 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +++ A  +  D       PDVV Y+ LI   C+    D    +  +MRE    PD
Sbjct: 276 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPD 335

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+ +L+ G  +   L  +  +L+ M +    P+V +Y+SL+  L + G+  +A  VF+
Sbjct: 336 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 395

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   + P   T+N +++G C     D+AL +   +   G +P+++TYN LI GLCK G
Sbjct: 396 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 455

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +  ++      P+ ITY+ ++    +  +  +   +   M ++    D   + 
Sbjct: 456 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 515

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  +   G + +A   +E+MV      D+ +Y +L++ +CK G++  A  +L  M K+
Sbjct: 516 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKR 575

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T+T LID  C+AG    A   LE M   G   N+  Y  ++      G ++ A
Sbjct: 576 GCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635

Query: 377 INVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
             + E +E       D F Y  M+  LC+  R+ +A +LL +  +SG         A++ 
Sbjct: 636 RKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIR 695

Query: 432 GL 433
           GL
Sbjct: 696 GL 697



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 201/399 (50%), Gaps = 7/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+  L+KA  ++ +    G +PD   YN +I A C+  +       L+  R      +
Sbjct: 69  LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA---LDYFRSMECEKN 125

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+T+  +I G  + + L  +     +M + G  P+ W+YN L++   ++ K   A  + +
Sbjct: 126 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 185

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P   T++ +++G C+    D A ++FR + ++G +P LVTYN L+ GLC+ G
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +L E+ + G  P+  +Y T+M    +  K  + L++           D   Y 
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+IA   K GRL EA    E+M  +  + D+V++  L++  CK  +L+ A  +L+ ME +
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T++ LIDGLCK G ++ A+   + M   G + N+  YN ++        +D A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           + + E M     + D  TY++++  LCK  R P A++L 
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 464



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 7/381 (1%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           ++ G   +V TYN L     R   +  +  +L      GI P+V++Y  ++  L + G  
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A  + ++M      P  A +N +++ LCK R T  AL  FR ++    V   +T+ I+
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV---ITWTIM 132

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCKA RL  A     ++   G  PN  TY  ++    +  K      +L  MK  G 
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y TVI  F +  ++  A     QMV +G   ++V+YNTL++  C+ G ++ AY 
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LLDEM ++G + DK+++  L+ GLCK G I  A    E  +      ++ AY+ ++  L 
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K G++D A  +FE M       D  T+++++  LCK  RL  A ++L +           
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
              +++DGL  +G  R+A+++
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEV 393



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 37/334 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  N ++ A  ++ +    G LPD++TYN LID  C+         +   M+    +PD
Sbjct: 416 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 475

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY+ LI G  +   +  +  L D+ML+  + PDV ++++L+      G  D+A R+ +
Sbjct: 476 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 535

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D +P   T+  +++G CK      A R+ + + K G  P +VTY  LI   C+AG
Sbjct: 536 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595

Query: 197 RLRTARWILKELGDSGHAPNAITYTTI--------------------------------- 223
           +   A  +L+E+  +G  PN ITY ++                                 
Sbjct: 596 KPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAY 655

Query: 224 ---MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-V 279
              M    R  +    LE+L A+K+ G       Y  +I    +   L +A + +E+M +
Sbjct: 656 RVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTL 715

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +   + +  +Y  +I    +EG+ E A  L DE+
Sbjct: 716 SRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 11/294 (3%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FG +  +  N  V T       FCK  R++ A  +  D ++  VLPDVVT++ L++ YC
Sbjct: 463 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 522

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                D    +L  M  +  SPDV TY SL+ G  +   +  +  +L  M + G  P+V 
Sbjct: 523 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y +L+    + GKP  A R+ ++M+   + P   T+  ++ G C     + A ++   L
Sbjct: 583 TYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL 642

Query: 174 QK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++      ++  Y +++ GLC+ GR+  A  +L+ +  SG  P    Y  +++   + ++
Sbjct: 643 ERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKE 702

Query: 233 YKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +E+L  M   RK    +   Y  VI    + GR +EA    ++++ +  Q
Sbjct: 703 LGKAMEVLEEMTLSRKSRP-NAEAYEAVIQELAREGRHEEANALADELLGNKGQ 755



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 7/182 (3%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A K++G+  + + Y  +  A ++  R+ E    ++     G+  ++ +Y  +I   CK G
Sbjct: 14  ASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSG 73

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A  LL+EM + G   D   +  +I  LCKA N   A   L+Y   +  + N+  + 
Sbjct: 74  DLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA---LDYFRSMECEKNVITWT 130

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D L K  ++  A   F  M+    V + +TY+ +++  CK  ++  A  LL    +S
Sbjct: 131 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190

Query: 418 GV 419
           G+
Sbjct: 191 GL 192


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 149/446 (33%), Positives = 223/446 (50%), Gaps = 14/446 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI + + C+A    +A  I    + R GV P +VTYN +I+  C+     AG  +   + 
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PDVVTYN+LI    +   L  +  L  +M   G  P+V +Y+ L++ L ++G+ D
Sbjct: 65  ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124

Query: 130 EANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTY 185
           EA  + Q+M     D+ P   T+N  L+GLCK   T  A  + R L+       P+ VT+
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + LI GLCK G++  A  +  ++   G+ PN ITY  ++    +  K +    ++ +M  
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI-----VSYNTLINLYCKE 300
           KG T D   Y  ++ AF K  R+ EA + +  M + G   ++     V++N LI   CK 
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G  E A  L +EM  +  + D  T   LIDGLCKAG ++ AR  L+ M  +G   N+  Y
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +V  L K G+I+ A    E M     V DS TY S+V+ LC+A R   A +L+     
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 424

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREA 442
            G          +VDGL  SG   +A
Sbjct: 425 FGWDPDTVTYNILVDGLWKSGKTEQA 450



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 5/354 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           L V PD VT++ LID  C+    D   ++ + M   G  P+V+TYN+L+ G  +   +  
Sbjct: 175 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT-----ATF 150
           +  +++ M++ G+ PDV +Y+ L+    +  + DEA  +   M     TP        TF
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTF 294

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           NI++ G CK    + A  +F  +      P+++T+  LI GLCKAG++  AR IL  +G+
Sbjct: 295 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  PN +TY  ++    ++ + +   + L  M   G   D   Y +++ A  +  R  +
Sbjct: 355 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 414

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + ++ + G   D V+YN L++   K GK E A  +L+EM  +G + D +T      
Sbjct: 415 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFS 474

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           GL ++GN+ G    L  +   G   +    + I+D + + GK+D    + +  E
Sbjct: 475 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 40/300 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CKA+++E+A A+I   +  GV PDV+TY++L+DA+C+    D    +L+ M  
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279

Query: 71  AGISPDV-----VTYNSLIAGATRNS---------------------------------- 91
            G +P+V     VT+N LIAGA +                                    
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 339

Query: 92  -LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  + D+LD M  +G+PP+V +YN+L+H L + G+ +EA +  ++M+     P + T+
Sbjct: 340 GQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITY 399

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
             ++  LC+   TD+AL++   L+  G+ P+ VTYNIL+ GL K+G+   A  +L+E+  
Sbjct: 400 GSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 459

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            GH P++ T+        R+      +E+L  +  KG   D     +++    + G+L +
Sbjct: 460 KGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 98/192 (51%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA ++E A  I+     LGV P+VVTYN L+   C+    +     L  M  +G  PD
Sbjct: 336 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 395

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY SL+    R S    +L L+ E+   G  PD  +YN L+  L++ GK ++A  V +
Sbjct: 396 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P + TF    +GL ++      + + R +   G +P+  T + ++  +C++G
Sbjct: 456 EMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG 515

Query: 197 RLRTARWILKEL 208
           +L   + ++KE 
Sbjct: 516 KLDDVKAMIKEF 527



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 81/164 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CK+ R+E+A   + + +  G +PD +TY  L+ A C+    D    +++ ++ 
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 424

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN L+ G  ++     ++ +L+EM+  G  PD +++ +    L + G    
Sbjct: 425 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAG 484

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
              + + ++   + P   T + +L+ +C++   D+   M +  +
Sbjct: 485 TMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 219/437 (50%), Gaps = 14/437 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   LE+A  +I   I  G +PDVVTYN ++D  C+    +    + N M  
Sbjct: 84  NVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER 143

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+  ++N++I G  + S +  +  +  EM    IPPD WSY  L+  L + GK +E
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNE 203

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++FQ M+   +TP   T+N++++G+C     D AL +F+ ++  G  P   T+NILI 
Sbjct: 204 AYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILID 263

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G+L  A  +LK + D GH P+ +TY+T++       +      +L  M ++    
Sbjct: 264 AHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                 T+I    K GR+KEA + ++ MV+ G   D+V+YNTL++ +C+ G+ E A  LL
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G   +  T+T L+ GLCKA  +  A      M   G   NL  Y  ++      
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G++D  + +F  M       D   Y ++   LCK+ R    S   L  L+ G   L+S  
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR----SARALEILREGRESLRSEA 499

Query: 427 ------KAVVDGLRHSG 437
                 +  VDGL  +G
Sbjct: 500 WGDEVYRFAVDGLLEAG 516



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 205/412 (49%), Gaps = 4/412 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +    KA +L  A  +    +  GV P  V Y  LI   C   SFD    +   M  
Sbjct: 14  GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P  VTYN +I  + +  +L  + DL+ +M+E G  PDV +YN++M  L +  + +E
Sbjct: 74  RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 133

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M     TP   + N ++ GLC+    D A ++F  ++     P+  +Y ILI 
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILID 193

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+L  A  + + + DSG  P+A+TY  ++            LE+  +M+ KG   
Sbjct: 194 GLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             F +  +I A  K G+L EA   +++M  DG   D+V+Y+TLI+  C   +++ A  LL
Sbjct: 254 SRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++M K+  +    T   LI GLCKAG IK AR  L+ M   G   ++  YN +V    + 
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           G+ + A  +   M  +    +  TY+++V  LCKA RLP A  +      SG
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 8/376 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E  +SPD  +Y  LI G  +   L+ + +L  ++L  G+ P   +Y SL+H L     
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A  +F DM      P   T+N+M++  CK    + A  + + + + G VP++VTYN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++ GLCK+ R+  A  +  E+   G  PN  ++ TI+    +  K     ++   M+ K 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  +I    K G+L EA    ++M+  G+    V+YN +I+  C    L+ A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   M  +G    ++T  ILID  CK G +  A   L+ M   G   ++  Y+ ++  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 368 GKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
               ++D A ++ E M  +       T ++++H LCKA R+  A ++L + + SG    +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG----Q 356

Query: 424 SAQKAVVDGLRHSGCR 439
           S      + L H  CR
Sbjct: 357 SPDVVTYNTLVHGHCR 372



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 181/373 (48%), Gaps = 8/373 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C A  L++A  +       G  P   T+N+LIDA+C+    D  + +L RM +
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTY++LI+G    + +  +  LL++M++    P V + N+L+H L + G+  E
Sbjct: 284 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 343

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V   M+    +P   T+N +++G C+   T+ A  +   +   G  P +VTY  L+ 
Sbjct: 344 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 403

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA RL  A  +  ++  SG APN  TYT ++       +   GL++   M   G + 
Sbjct: 404 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYM----EQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           D   Y T+ A   K GR   A + +    E + ++    ++  Y   ++   + GK+E A
Sbjct: 464 DHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLEAGKMEMA 521

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL--EAYNCIV 364
              + +M + G          L+ GLCK+G    AR  LE +  + +      +A   + 
Sbjct: 522 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVE 581

Query: 365 DRLGKDGKIDHAI 377
           + +GK  +I+ A+
Sbjct: 582 EMVGKGYEIEDAV 594


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 227/421 (53%), Gaps = 7/421 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC++ + +KA  I+      G +PDV+TYN+LI  YC+    D    +L RM    ++PD
Sbjct: 151 FCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPD 207

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+++     +  L  ++++LD  L+    PDV +Y  L+          +A ++  
Sbjct: 208 VVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+N+++NG+CK    D A++    +  +G  P ++T+NI+++ +C  G
Sbjct: 268 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L ++   G +P+ +T+  ++    R R     +++L  M + G   +   Y 
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F +  ++  A +Y+E MV+ G   DIV+YNTL+   CK+GK++AA  +L+++  +
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G      T+  +IDGL K G  + A   LE M + G   ++  Y+ ++  LG++GK+D A
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507

Query: 377 INVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F  ME   +K S  TY++++  LCKA++   A   L   ++ G +  ++    +++G
Sbjct: 508 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567

Query: 433 L 433
           +
Sbjct: 568 I 568



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 185/355 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C + +L++A  ++   ++    PDV+TY +LI+A C          +L+ MR+
Sbjct: 212 NTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 271

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTYN LI G  +   L  ++  L+ M   G  P+V ++N ++  +   G+  +
Sbjct: 272 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMD 331

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+  DM+    +P   TFNI++N LC+ R    A+ +   + KHG VP  ++YN L+ 
Sbjct: 332 AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+  ++  A   L+ +   G  P+ +TY T++    ++ K    +EIL+ +  KG + 
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y TVI    K+G+ + A + +E+M   G++ DI++Y+TL+    +EGK++ A  + 
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
            +ME    +    T+  ++ GLCKA     A   L YM + G       Y  +++
Sbjct: 512 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 179/366 (48%), Gaps = 7/366 (1%)

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           RN  L   L  L+ M+  G  PDV +  SL+    + GK  +A R+ + +      P   
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+N+++ G CK+   D AL +   L++    P++VTYN +++ LC +G+L+ A  +L   
Sbjct: 178 TYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                 P+ ITYT +++    +      +++L  M++KG   D   Y  +I    K GRL
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA  ++  M + G + +++++N ++   C  G+   A  LL +M ++G      T  IL
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I+ LC+   +  A   LE M K G   N  +YN ++    ++ K+D AI   E M  +  
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY++++  LCK  ++ +A ++L      G   +      V+DGL   G    A +
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474

Query: 445 IQSKIR 450
           +  ++R
Sbjct: 475 LLEEMR 480



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 152/303 (50%), Gaps = 7/303 (2%)

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           ++ N  +  L + G+ +E  +  + MI     P       ++ G C++  T  A R+   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           L+  G VP+++TYN+LI G CK+G +  A  +L+ +     AP+ +TY TI++    + K
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            K  +E+L    ++    D   Y  +I A      + +A   +++M   G + D+V+YN 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           LIN  CKEG+L+ A   L+ M   G + +  TH I++  +C  G    A   L  M + G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
              ++  +N +++ L +   +  AI+V E M     V +S +Y+ ++H  C+ K++  A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 409 KLL 411
           + L
Sbjct: 404 EYL 406



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 7/200 (3%)

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           +F+ F     +   V+ G L+E   ++E+M+  G   D+++  +LI  +C+ GK + A  
Sbjct: 103 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATR 162

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +++ +E  G   D  T+ +LI G CK+G I  A   LE + ++    ++  YN I+  L 
Sbjct: 163 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKA---LEVLERMSVAPDVVTYNTILRSLC 219

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             GK+  A+ V +    +    D  TY+ ++   C    +  A KLL    K G +    
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279

Query: 425 AQKAVVDGLRHSGCRREAKK 444
               +++G+   G   EA K
Sbjct: 280 TYNVLINGICKEGRLDEAIK 299



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 83/180 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +++ A  I+      G  P ++TYN +ID   +    +    +L  MR 
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY++L+ G  R   +  ++ +  +M  + I P   +YN++M  L +  +   
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 541

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      M+     P  AT+ I++ G+      + AL +   L   GFV +     +++K
Sbjct: 542 AIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVVVK 601


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 214/409 (52%), Gaps = 6/409 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +++++A  ++   I+ G  P+V+TY  L+D +C+    D    ++ +M E G  P+
Sbjct: 124 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 183

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            +TYN+++ G      L  +L L  EM E G  PPDV++Y++++  L + GK D+A R+ 
Sbjct: 184 AITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV 243

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M+    +P   T++ +L+GLCK    D A  + + + + G  P +VTYN +I G CK 
Sbjct: 244 EAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 303

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A  +L+E+ D G  PN +TYT ++    +  K +  + ++  M  KGY  + F Y
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            +++  F K   ++ A   +  M+  G   ++VSYNT+I   CK  K+    LLL++M  
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
                D  T   +ID +CK   +  A      + + G   NL  YN +V  L K  + D 
Sbjct: 424 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 483

Query: 376 AINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           A  +   M  K     D  TY++++  LCK+KR+  A KL L  L  G+
Sbjct: 484 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532



 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 210/377 (55%), Gaps = 5/377 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD VTYN +I+   +    D    +L  M + G +P+V +YN+++ G  + + +  +L L
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L++M+  G PPDV SY ++++ L +L + DEA RV   MI     P   T+  +++G C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAI 218
               D A+ + R + + G+ P  +TYN ++ GLC   +L +A  + KE+ +SG   P+  
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+TI+    ++ K      ++ AM  KG + +   Y +++    K G+L EAT  +++M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   +IV+YNT+I+ +CK G+++ AY LL+EM   G + +  T+T+L+D  CK G  
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           + A   +E M + G+  NL  YN ++D   K  +++ A  +  SM     V +  +Y+++
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 395 VHNLCKAKRLPSASKLL 411
           +  LCKA ++     LL
Sbjct: 402 IAGLCKATKVHEGVLLL 418



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 195/364 (53%), Gaps = 5/364 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PD VTYN++I G +++  L  ++ LL+EM++ G  P+V+SYN+++H   +  + + A  +
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            + M+     P   ++  ++NGLCK    D A R+   + + G  P ++TY  L+ G C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-TFDGF 253
            G L  A  +++++ + G+ PNAITY  IM      RK    L++   M+  G    D F
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++ + VK G++ +A   +E MV+ G   ++V+Y++L++  CK GKL+ A  LL  M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G   +  T+  +IDG CK G I  A   LE M   G   N+  Y  ++D   K GK 
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 374 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + AI + E M     V + FTY+S++   CK   +  A +LL S ++ G      +   V
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 430 VDGL 433
           + GL
Sbjct: 402 IAGL 405



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 211/430 (49%), Gaps = 48/430 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA +L++A A++    R G  P++VTYN +ID +C+    D  Y +L  M + G  P+
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324

Query: 77  VVTYNSLIAGA--------------------------TRNSLLS--CSLD-------LLD 101
           VVTY  L+                             T NSLL   C  D       LL 
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M++ G  P+V SYN+++  L +  K  E   + + M+  +  P   TFN +++ +CK  
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITY 220
             D A  +F  +Q+ G  P LVTYN L+ GLCK+ R   A ++L+E+    G +P+ ITY
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504

Query: 221 TTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            T++    K    +R YKL L++LS     G   D   Y  VI++  K   + EA + +E
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLS----DGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+ +G     ++Y TLI+ +CK G L+ A  +L  +  +G   D  T +I ID L K G
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 620

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A   LE M + G   +   YN ++       + + A+++FE M       D+ TY+
Sbjct: 621 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYT 680

Query: 393 SMVHNLCKAK 402
           ++V +L   K
Sbjct: 681 TLVGHLVDKK 690



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 212/409 (51%), Gaps = 5/409 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +  K+ +++ A  ++   +  G  P+VVTY+ L+   C+    D    +L RM  +G SP
Sbjct: 229 SLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++VTYN++I G  +   +  +  LL+EM++ G  P+V +Y  L+    + GK ++A  + 
Sbjct: 289 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 348

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M+     P   T+N +L+  CK    + A ++   + + G VP +V+YN +I GLCKA
Sbjct: 349 EVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 408

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            ++     +L+++  +   P+ +T+ TI+    +  +  +  E+ + ++  G T +   Y
Sbjct: 409 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 468

Query: 256 CTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            +++    K  R  +A   + +M    G   DI++YNT+I+  CK  +++ AY L  +M 
Sbjct: 469 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 528

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G   D  T++I+I  LCK   +  A   LE M K GFD     Y  ++D   K G +D
Sbjct: 529 SDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLD 588

Query: 375 HAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            A+ + + +  K S+    T+S  +  L K  RL  A +LL + L++G+
Sbjct: 589 KALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 637



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 224/420 (53%), Gaps = 5/420 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K++RL+ A  ++ + +  G  P+V +YN ++  +C+    +    +L +M   G  PDVV
Sbjct: 56  KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVV 115

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           +Y ++I G  +   +  +  ++D+M++ G  P+V +Y +L+    ++G  D A  + + M
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGR 197
                 P   T+N +++GLC  R  D+AL++F+ +++ G   P++ TY+ ++  L K+G+
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +++ +   G +PN +TY++++    +  K      +L  M R G + +   Y T
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNT 295

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K+GR+ EA   +E+MV  G Q ++V+Y  L++ +CK GK E A  L++ M ++G
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           +  + +T+  L+D  CK   ++ A   L  M + G   N+ +YN ++  L K  K+   +
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            + E M     V D  T+++++  +CK  R+  A +L     +SG         ++V GL
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 5/152 (3%)

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           + +++   C  G+   A L   EM K     D  T+  +I+GL K+  +  A   LE M 
Sbjct: 13  HKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
             GF  N+ +YN ++    K  ++++A+ + E M ++    D  +Y+++++ LCK  ++ 
Sbjct: 72  DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            A +++   ++ G +        +VDG    G
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 163


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 236/445 (53%), Gaps = 8/445 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC A  L  A  ++ +    G  PD  T+  +I A       D     ++ +R 
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRS 172

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVTY +LIA   R   L  ++ LL+EM E G PP++ +YN L+  L +L     
Sbjct: 173 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 232

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V + MI G   P   TFN +++G CK    D+A ++   +   G  P +VTY+ LI 
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+ +   A+ +L+E+   G  P+A TY+ ++    +  K +   ++L  M   G T 
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I AF K G+L EA   +++M       D+V+YNT+I+  CK GK+  A ++L
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412

Query: 311 DEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           ++M++ G    D  T++ +I+GLCK+  +  A+  L+ M K G + ++  Y  I+D L K
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+++ A  + + M+      +  TY++++  LCKA+++  A +++     +G       
Sbjct: 473 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              +V+GL  SG  +EA+++  +++
Sbjct: 533 YNTMVNGLCVSGRIKEAQQLVQRMK 557



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 199/419 (47%), Gaps = 37/419 (8%)

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD------------------- 111
           A   PDV +YN +I+G      L  +L+LL+EM   G  PD                   
Sbjct: 106 ASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDG 165

Query: 112 -------------VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
                        V +Y +L+    +  K +EA ++ ++M      P   T+N++++ LC
Sbjct: 166 AMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K      A  + + + + GF P ++T+N L+ G CK G +  AR +L  +   G  PN +
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+ ++    +++K+    E+L  MK +G T D F Y  +I    K  +++EA   + +M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   D+V Y+++I+ +CK GKL  A   L EM KQ    D  T+  +IDGLCK G I
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405

Query: 339 KGARLHLEYMNKIG-FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSS 393
             A++ LE M + G    ++  Y+ +++ L K   +  A  + + M       D  TY++
Sbjct: 406 AEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 465

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++  LCK  RL  A  LL    ++G          ++ GL  +    EA+++  ++R A
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V  FCK   ++ A  ++   +  G+ P+VVTY+ LID  C+   F     +L  M+
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++PD  TY++LI G  +   +  +  +L  M   G  PDV  Y+S++H   + GK  
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNIL 188
           EA +  Q+M     +P   T+N +++GLCK      A  +   +Q+ G V P++VTY+ +
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK+  L  A+ +L  +  +G  P+ +TYTTI+    +  + +    +L  MKR G 
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T+I+   K  ++ EA   ME+M   G   ++V+YNT++N  C  G+++ A  
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 551

Query: 309 LLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYM 348
           L+  M+    EC  D  T+  +++ L  +  ++ A   LE M
Sbjct: 552 LVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 160/302 (52%), Gaps = 5/302 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ +  +A+ ++ +    GV PD  TY+ LI   C+    +    +L RM  +G +PD
Sbjct: 294 LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y+S+I    ++  L  +   L EM +    PDV +YN+++  L +LGK  EA  + +
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413

Query: 137 DMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M   GD+ P   T++ ++NGLCK+     A ++   + K G  P++VTY  +I GLCK 
Sbjct: 414 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 473

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GRL  A ++L+ +  +G APN +TYTT++    + RK      ++  M+  G   +   Y
Sbjct: 474 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 533

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDG---VQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
            T++      GR+KEA   +++M  DG      D  +Y T++N       ++ A  LL++
Sbjct: 534 NTMVNGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592

Query: 313 ME 314
           M+
Sbjct: 593 MK 594



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 181/393 (46%), Gaps = 16/393 (4%)

Query: 71  AGISPDVVTYNSL-----IAGATRNSLLSCSLDL-LDEMLEMGIPP---DVWSYNSLMHC 121
           + I PD+  ++       I G   NSL    L L         IP      +S+NSL+  
Sbjct: 27  SAIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQV 86

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L +  K  EA  +F+  +     P   ++NI+++G C       AL +   ++  GF P+
Sbjct: 87  LVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPD 146

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
             T+  +I  +  AG L  A   +  L   G  PN +TYT ++    R +K +  +++L 
Sbjct: 147 AFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLE 203

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M+ +G   +   Y  ++ A  K+  +  A D +++M+  G   +++++N+L++ +CK G
Sbjct: 204 EMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRG 263

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            ++ A  LL  M  +G   +  T++ LIDGLCK+     A+  LE M   G   +   Y+
Sbjct: 264 NVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYS 323

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L K  KI+ A  +   M       D   YSS++H  CK+ +L  A K L    K 
Sbjct: 324 ALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                      V+DGL   G   EA+ I  +++
Sbjct: 384 RKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 156/311 (50%), Gaps = 7/311 (2%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           ++N +L  L + +    A  +FR        P++ +YNI+I G C AG L  A  +L+E+
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             +G AP+A T+T I+            ++ L +M   G   +   Y  +IAAF +  +L
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKL 195

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           +EA   +E+M   G   ++V+YN L++  CK   + AA  ++ +M + GF  +  T   L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           +DG CK GN+  AR  L  M   G   N+  Y+ ++D L K  K   A  V E M+ +  
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D+FTYS+++H LCKA ++  A ++L     SG         +++     SG   EA+K
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 445 IQSKIRMAKIS 455
              ++R  + S
Sbjct: 376 TLQEMRKQRKS 386



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 37/418 (8%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G S    ++NSL+    R      + DL    L     PDV SYN ++      G    A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 132 NRVFQDMI--------------------CGDL------------TPCTATFNIMLNGLCK 159
             + ++M                      GDL             P   T+  ++    +
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +  + A+++   +++ G  P LVTYN+L+  LCK   +  A+ ++K++ + G APN +T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           + +++    +        ++L  M  KG   +   Y  +I    K  +  EA + +E+M 
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           T GV  D  +Y+ LI+  CK  K+E A  +L  M   G   D   ++ +I   CK+G + 
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSM 394
            A+  L+ M K     ++  YN ++D L K GKI  A  + E M+     + D  TYS++
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++ LCK+  L  A KLL    K+G          ++DGL   G   EA+ +   ++ A
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 489


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 225/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD VTYN  +   CQ         +++ M 
Sbjct: 270 VNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLML 329

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN++I   ++N  L  +  ++++M++ G  PD  ++N+L+  L    + +
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLE 389

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + +++    L+P   TFNI++N LCK       +R+F  ++  G  P+ VTYNILI
Sbjct: 390 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +L E+  +G   + +TY TI+    +  + +   E+   M  +G +
Sbjct: 450 DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                + T+I    K  R+ +AT+ +EQMV +G+Q + ++YN+++  YCK+G ++ A  +
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADI 569

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   GFE D  T+  LI+GLCKAG  + A   L  M   G     +AYN ++  L +
Sbjct: 570 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 629

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
              +  A+N+F  M    E  D+ TY  +  +LC+    +  A   L+  +  G     S
Sbjct: 630 RNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFS 689

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 690 SFRMLAEGLLNLG 702



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 207/414 (50%), Gaps = 7/414 (1%)

Query: 14  VCTFCKANRLEKAEAIII---DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           V ++ +  R + A  +++   D    GV  D V +N L++   +        ++ N M  
Sbjct: 131 VESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTG 190

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDVVT N+LI    R   +  ++ +L+EM   G+ PD  ++ +LM    + G  + 
Sbjct: 191 RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEA 250

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV   M+    +P   T N+++NG CK    ++AL   +     GF P+ VTYN  + 
Sbjct: 251 ALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVH 310

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G +  A  ++  +   GH P+  TY T++ C  +N +      I++ M  +G   
Sbjct: 311 GLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 370

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I A     RL+EA D   ++   G+  D+ ++N LIN  CK G       L 
Sbjct: 371 DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 430

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM+  G   D+ T+ ILID LC  G +  A   L  M   G   +   YN I+D L K 
Sbjct: 431 EEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKK 490

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            +I+ A  VF+ M+     + + T+++++  LCKAKR+  A++L+   +K G++
Sbjct: 491 MRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 544



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 206/437 (47%), Gaps = 4/437 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +   C+A+++  A  ++ +    GV PD  T+  L+  + +  S +A   +  +M 
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           EAG SP  VT N LI G  +   +  +L  + + +  G  PD  +YN+ +H L Q G   
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A +V   M+     P   T+N ++N L KN   D A  +   +   G +P+  T+N LI
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L    RL  A  + +EL   G +P+  T+  ++    +     LG+ +   MK  G T
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCT 439

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I     +G+L  A D + +M ++G     V+YNT+I+  CK+ ++E A  +
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEV 499

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D+M+ QG      T   LIDGLCKA  I  A   +E M K G   N   YN I+    K
Sbjct: 500 FDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G I  A ++ E+M       D  TY ++++ LCKA R   A KLL      G+R    A
Sbjct: 560 QGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 619

Query: 426 QKAVVDGLRHSGCRREA 442
              V+  L      R+A
Sbjct: 620 YNPVIQSLFRRNNLRDA 636



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 190/437 (43%), Gaps = 44/437 (10%)

Query: 27  EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD-AGYTILNRMREA--GISPDVVTYNSL 83
           E ++ +  R G     V     +++Y +   FD A   +LN++     G+  D V +N L
Sbjct: 109 EGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHL 168

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           +      S L     + +EM   GI PDV + N+L+  L +  +   A  + ++M    +
Sbjct: 169 LNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGV 228

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-R 202
            P   TF  ++ G  +    + ALR+   + + G  P  VT N+LI G CK GR+  A  
Sbjct: 229 APDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALG 288

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
           +I +E+ D G  P+ +TY T +    +N      L+++  M ++G+  D F Y TVI   
Sbjct: 289 YIQQEIAD-GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 347

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K G L EA   + QMV  G   D  ++NTLI     + +LE A  L  E+  +G   D 
Sbjct: 348 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           YT  ILI+ LCK G                 D +L                   I +FE 
Sbjct: 408 YTFNILINALCKVG-----------------DPHL------------------GIRLFEE 432

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M+      D  TY+ ++ +LC   +L +A  LL     +G          ++D L     
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492

Query: 439 RREAKKIQSKIRMAKIS 455
             EA+++  ++    IS
Sbjct: 493 IEEAEEVFDQMDAQGIS 509



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 1/211 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+    VT+N LID  C+    D    ++
Sbjct: 476 STVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELI 535

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M + G+ P+ +TYNS++    +   +  + D+L+ M   G   DV +Y +L++ L + 
Sbjct: 536 EQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKA 595

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A ++ + M    + P    +N ++  L +     +AL +FR + + G  P+ +TY
Sbjct: 596 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTY 655

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAP 215
            I+ + LC+  G ++ A   L E+ + G  P
Sbjct: 656 KIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP 686



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 10/306 (3%)

Query: 153 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L  L +    + ALRM    L +  F P    Y  +++ L  AG       +++E+   
Sbjct: 59  LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLE-ILSAMKRK--GYTFDGFGYCTVIAAFVKIGRL 268
           GH   A+   + ++   R R++   ++ +L+ +     G   D   +  ++   V+  +L
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL 178

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           K       +M   G+Q D+V+ NTLI   C+  ++  A L+L+EM   G   D+ T T L
Sbjct: 179 KLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTL 238

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 388
           + G  + G+I+ A      M + G        N +++   K G+++ A+   +  E+ D 
Sbjct: 239 MQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ-EIADG 297

Query: 389 F-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           F     TY++ VH LC+   +  A K++   L+ G          V++ L  +G   EAK
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357

Query: 444 KIQSKI 449
            I +++
Sbjct: 358 GIVNQM 363


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 219/437 (50%), Gaps = 14/437 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   LE+A  +I   I  G +PDVVTYN ++D  C+    +    + N M  
Sbjct: 84  NVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMER 143

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+  ++N++I G  + S +  +  +  EM    IPPD WSY  L+  L + GK +E
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNE 203

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F+ M+   +TP   T+N++++G+C     D AL +F+ ++  G  P   T+NILI 
Sbjct: 204 AYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILID 263

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G++  A  +LK + D GH P+ +TY+T++       +      +L  M ++    
Sbjct: 264 AHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                 T+I    K GR+KEA + ++ MV+ G   D+V+YNTL++ +C+ G+ E A  LL
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G   +  T+T L+ GLCKA  +  A      M   G   NL  Y  ++      
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G++D  + +F  M       D   Y ++   LCK+ R    S   L  L+ G   L+S  
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR----SARALEILREGRESLRSEA 499

Query: 427 ------KAVVDGLRHSG 437
                 +  VDGL  +G
Sbjct: 500 WGDEVYRFAVDGLLDAG 516



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 206/412 (50%), Gaps = 4/412 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +    KA +L  A  +    +  GV P  V Y  LI   C   SFD    +   M  
Sbjct: 14  GILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P  VTYN +I  + +  +L  + DL+ +M+E G  PDV +YN++M  L + G+ +E
Sbjct: 74  RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEE 133

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M     TP   + N ++ GLC+    D A ++F  ++     P+  +Y ILI 
Sbjct: 134 ALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILID 193

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+L  A  + + + DSG  P+A+TY  ++            LE+  +M+ KG   
Sbjct: 194 GLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             F +  +I A  K G++ EA   +++M  DG   D+V+Y+TLI+  C   +++ A  LL
Sbjct: 254 SRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++M K+  +    T   LI GLCKAG IK AR  L+ M   G   ++  YN +V    + 
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           G+ + A  +   M  +    +  TY+++V  LCKA RLP A  +      SG
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 8/376 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E  +SPD  +Y  LI G  +   L+ + DL  ++L  G+ P   +Y SL+H L     
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A  +F DM      P   T+N++++  CK    + A  + + + + G VP++VTYN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++ GLCK+GR+  A  +  E+   G  PN  ++ TI+    +  K     ++   M+ + 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  +I    K G+L EA     +M+  G+    V+YN +I+  C    L+ A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   M  +G    ++T  ILID  CK G +  A   L+ M   G   ++  Y+ ++  L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 368 GKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
               ++D A ++ E M  +       T ++++H LCKA R+  A ++L + + SG    +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG----Q 356

Query: 424 SAQKAVVDGLRHSGCR 439
           S      + L H  CR
Sbjct: 357 SPDVVTYNTLVHGHCR 372



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 179/373 (47%), Gaps = 8/373 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C A  L++A  +       G  P   T+N+LIDA+C+    D  + +L RM +
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD 283

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTY++LI+G    + +  +  LL++M++    P V + N+L+H L + G+  E
Sbjct: 284 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 343

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V   M+    +P   T+N +++G C+   T+ A  +   +   G  P +VTY  L+ 
Sbjct: 344 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 403

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA RL  A  +  ++  SG APN  TYT ++       +   GL++   M   G + 
Sbjct: 404 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYM----EQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           D   Y T+ A   K GR   A + +    E + ++    ++  Y   ++     GK+E A
Sbjct: 464 DHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLDAGKMEMA 521

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL--EAYNCIV 364
              + +M + G          L+ GLCK+G    AR  LE +  + +      +A   + 
Sbjct: 522 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVE 581

Query: 365 DRLGKDGKIDHAI 377
           + +GK  +I+  +
Sbjct: 582 EMVGKGYEIEDGV 594


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 230/425 (54%), Gaps = 9/425 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD++ YN +I  +C+    D+ Y +L+RM+  G SPD+VTYN LI       +L  +L+ 
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +++L+    P V +Y  L+      G  DEA ++  +M+  +L P   T+N ++ G+C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             Y D A ++   +   G+ P+++TYNIL++GL   G+      ++ ++   G   N +T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R+ K + G+ +L  MK+KG   DG+ Y  +IAA  K GR+  A + ++ M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           +DG   DIV+YNT++   CK+ + + A  + +++ + G   +  ++  +   L   G+ +
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYS 392
           +   + LE ++K G D +   YN ++  L +DG +D AI +   ME++ S       +Y+
Sbjct: 424 RALGMILEMLDK-GVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 482

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRM 451
            ++  LCK  R+  A ++L + +  G R  ++    +++G+   GC  +A+ + +  + M
Sbjct: 483 IVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542

Query: 452 AKISH 456
             IS 
Sbjct: 543 DAISE 547



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 195/430 (45%), Gaps = 40/430 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+ANR++ A  ++      G  PD+VTYN+LI + C     D+     N++ +
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLK 189

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P VVTY  LI        +  ++ LLDEMLE+ + PD+++YNS++  + + G  D 
Sbjct: 190 ENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDR 249

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGL--------------------------------- 157
           A ++   +      P   T+NI+L GL                                 
Sbjct: 250 AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309

Query: 158 --CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C++   +  + + + ++K G  P+   Y+ LI  LCK GR+  A  +L  +   G  P
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + Y TI+ C  + ++    L I   +   G + +   Y ++ +A    G    A   +
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMI 429

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLC 333
            +M+  GV  D ++YN+LI+  C++G ++ A  LL +ME +  EC     ++ I++ GLC
Sbjct: 430 LEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLC 489

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV---FESMEVKDSFT 390
           K   +  A   L  M   G   N   Y  +++ +G  G ++ A ++     +M+     +
Sbjct: 490 KVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHS 549

Query: 391 YSSMVHNLCK 400
           +  +    CK
Sbjct: 550 FERLYKTFCK 559



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 5/351 (1%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           SL  L  ++  G  PDV     L+H LF     D+A +V   ++     P    +N ++ 
Sbjct: 76  SLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHGHPDLIAYNAIIT 134

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C+    D+A ++   ++  GF P++VTYNILI  LC  G L +A     +L      P
Sbjct: 135 GFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKP 194

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             +TYT +++           +++L  M       D F Y ++I    + G +  A   +
Sbjct: 195 TVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQII 254

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             + + G   D+++YN L+     +GK EA Y L+ +M  +G E +  T+++LI  +C+ 
Sbjct: 255 SSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRD 314

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++     L+ M K G   +   Y+ ++  L K+G++D AI V + M     V D   Y
Sbjct: 315 GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           ++++  LCK KR   A  +     + G     S+  ++   L  +G +  A
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRA 425



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 5/230 (2%)

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CKAG    + + L+ L + GH P+ +  T ++   F ++     ++++  ++  G+  D 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DL 126

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I  F +  R+  A   +++M   G   DIV+YN LI   C  G L++A    ++
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           + K+  +    T+TILI+     G I  A   L+ M +I    ++  YN I+  + ++G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +D A  +  S+  K    D  TY+ ++  L    +  +  +L+   +  G
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 235/448 (52%), Gaps = 14/448 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   ++  A  +  + +++G  PDV+TY+ +I+  C+  +      +L +M 
Sbjct: 13  FNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKME 72

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  P+VV YN++I    ++ L++ ++D   EM++ GIPPDV++Y+S++H    LG+ +
Sbjct: 73  EKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVN 132

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F+ M+  ++ P   TF I+++GLCK R    A  +F  + + G  P++ TYN L+
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALV 192

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C   ++  A+ +   +   G APN  +Y  ++    ++ +      +L+ M  K  T
Sbjct: 193 DGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLT 252

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T++  F ++GR +EA + +++M + G+  ++++Y+ +++  CK G L+ A+ L
Sbjct: 253 PDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFEL 312

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M++   E + + +TILI+G+C  G ++ AR     +   G    +  Y  ++  L K
Sbjct: 313 LKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLK 372

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL-------LSCLKSG 418
            G  + A  +F  M V     +S TY+ ++    +    P+A +L+        S   S 
Sbjct: 373 GGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSST 432

Query: 419 VRI---LKSAQKAVVDGLRHSGCRREAK 443
            R+   L+S+ + +   +R S   R+ K
Sbjct: 433 FRMLSDLESSDEIISQFMRGSSQDRKTK 460



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 190/379 (50%), Gaps = 4/379 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G+ P +VT+N+L++G    + +  ++ L DEM++MG  PDV +Y+++++ L ++G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A ++ + M      P    +N +++ LCK+R    A+  F  + K G  P++ TY+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++ G C  GR+  A  + K++ +    PN +T+T ++    + R       +   M  KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  ++  +    ++ EA      M   G   ++ SYN LIN +CK G+++ A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL EM  +    D +T++ L+ G C+ G  + A+  L+ M   G   NL  Y+ ++D L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K G +D A  + ++M+      + F Y+ ++  +C   +L +A +L  +    G++   
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 424 SAQKAVVDGLRHSGCRREA 442
                ++ GL   G   EA
Sbjct: 361 VTYTVMISGLLKGGLSNEA 379



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 114/215 (53%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  NI +   CK+ R+++A+ ++ +     + PD+ TY+ L+  +CQ         +L
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL 278

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G+ P+++TY+ ++ G  ++  L  + +LL  M E  I P+++ Y  L+  +   
Sbjct: 279 KEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTF 338

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK + A  +F ++    + P   T+ +M++GL K   ++ A  +FR +  +G +P   TY
Sbjct: 339 GKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTY 398

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           N++I+G  + G    A  +++E+   G + ++ T+
Sbjct: 399 NVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 41/204 (20%)

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+Q  +V++NTL++  C + K+  A  L DEM K G E D  T++ +I+GLCK GN   A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSS--- 393
              L+ M + G   N+ AYN I+D L KD  +  A++ F  M VK     D FTYSS   
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM-VKEGIPPDVFTYSSILH 123

Query: 394 --------------------------------MVHNLCKAKRLPSASKLLLSCLKSGVRI 421
                                           ++  LCK + +  A  +  +  + G+  
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 422 LKSAQKAVVDGLRHSGCRREAKKI 445
                 A+VDG        EA+K+
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKL 207


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 230/441 (52%), Gaps = 4/441 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C   +++ A  +  + +R G  PDV++YN LI+  C   + +    +  +M + G  P+V
Sbjct: 174 CNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNV 233

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTYN++I    ++ L++ ++D L EM+  GIPPD  +YNS++H L  LG+ +EA R+F+ 
Sbjct: 234 VTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKR 293

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M      P   T+NI+++ L K+R  ++A      +   G  P++VTY  ++ GLC  G+
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L  A  + K++   G  P+ + Y TI+    ++R     +E LS M  +G   +   Y T
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++  F  +G+L EAT   ++MV   V  + ++++ L++  C+EG +  A  + + M ++G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E + YT+  L++G C    +  AR   E M   G   +L +YN +++      ++D A 
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +   M VK    ++ TY++++  LC   RL  A +L      SG+         +++GL
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593

Query: 434 RHSGCRREAKKIQSKIRMAKI 454
              G   EA K+   ++  K+
Sbjct: 594 CKHGHLDEALKLFKSMKEKKL 614



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 213/447 (47%), Gaps = 4/447 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK   +  A   + + +  G+ PD +TYN ++   C     +    +  RM +
Sbjct: 237 NTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTYN +I    ++ L++ + D L EM++ GIPPDV +Y +++H L  LG+ +E
Sbjct: 297 NGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNE 356

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F+ M      P    +N +++ LCK+R  ++A+     +   G  P  VTY+ ++ 
Sbjct: 357 AIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILH 416

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  G+L  A  + KE+      PN +T++ ++    +         +   M  KG   
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP 476

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y  ++  +    ++ EA    E MV  G   D+ SYN LIN YC   +++ A  LL
Sbjct: 477 NIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALL 536

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +    +  T+  ++ GLC  G +  A+   + M   G    L  Y+ +++ L K 
Sbjct: 537 TQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH 596

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A+ +F+SM+ K    D   Y+ ++  +    +L  A  L       G++      
Sbjct: 597 GHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTY 656

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAK 453
             ++ GL   G   EA ++  K +M K
Sbjct: 657 NVMIKGLLKEGLSDEAYELFRKWKMMK 683



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 215/453 (47%), Gaps = 39/453 (8%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV   V + N+LI+  C+    D   ++  +M + GI PDV+T+ +LI G      +  
Sbjct: 122 FGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKV 181

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +++L +EM+  G  PDV SYN+L++ L   G  + A  VF+ M      P   T+N +++
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIID 241

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R  ++A+     +   G  P+ +TYN ++ GLC  G+L  A  + K +  +G  P
Sbjct: 242 SLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY  I+   +++R      + LS M  +G   D   Y T++     +G+L EA    
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKE----------------------------------- 300
           ++M   G + D+V+YNT+I+  CK+                                   
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+L+ A  L  EM  +    +  T +IL+DGLC+ G +  AR   E M + G + N+  Y
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTY 481

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++      K++ A  VFE M  K    D  +Y+ +++  C ++R+  A  LL     
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             +         ++ GL + G   +A+++  K+
Sbjct: 542 KKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 188/394 (47%), Gaps = 4/394 (1%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +S D       RM      P +V +   +    +    S  + L ++M   G+   V+S 
Sbjct: 72  ISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSL 131

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++CL +L   D A  V+  M    + P   TF  ++NG+C       A+ ++  + +
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G  P++++YN LI GLC +G    A  + K++  +G  PN +TY TI+    ++R    
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            ++ LS M  +G   D   Y +++     +G+L EAT   ++M  +G + D+V+YN +I+
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
              K+  +  A   L EM  QG   D  T+T ++ GLC  G +  A    + M + G   
Sbjct: 312 SLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP 371

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++ AYN I+D L KD  ++ A+     M  +    ++ TYS+++H  C   +L  A++L 
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLF 431

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              +   V         +VDGL   G   EA+ +
Sbjct: 432 KEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R+   P +V +   + +  +   +     + N+M   G++  V + N LI    R + + 
Sbjct: 86  RMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVD 145

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++ +  +M ++GI PDV ++ +L++ +   GK   A  ++ +M+     P   ++N ++
Sbjct: 146 FAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLI 205

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NGLC +  T+ A+ +F+ ++++G  P +VTYN +I  LCK   +  A   L E+   G  
Sbjct: 206 NGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP 265

Query: 215 PNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           P+AITY +I+   CC    +      +   M++ G   D   Y  +I +  K   + +A 
Sbjct: 266 PDAITYNSIVHGLCCL--GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D++ +MV  G+  D+V+Y T+++  C  G+L  A  L  +ME++G + D   +  +ID L
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
           CK   +  A   L  M   G   N   Y+ I+      G++D A  +F+ M     + ++
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            T+S +V  LC+   +  A  +  +  + GV        A+++G        EA+K+
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV 500



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 115/220 (52%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   +I V   C+   + +A  +       GV P++ TYN L++ YC     +    + 
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G +PD+ +YN LI G   +  +  +  LL +M    + P+  +YN++M  L  +
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYV 561

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  +A  +F+ M    + P   T++I+LNGLCK+ + D AL++F+ +++    P+++ Y
Sbjct: 562 GRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILY 621

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
            ILI+G+   G+L  A+ +  +L   G  P   TY  ++K
Sbjct: 622 TILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIK 661


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 236/434 (54%), Gaps = 15/434 (3%)

Query: 17  FCKANRLEKAEAI--IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           FC+  +  KA  I  +++G   G +PDV+TYN++I  YC+    +   ++L+RM    +S
Sbjct: 147 FCRMGKTRKAAKILEVLEGS--GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVS 201

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PDVVTYN+++     +  L  ++++LD ML+    PDV +Y  L+    +     +A ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKL 261

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             +M     TP   T+N+++NG+CK    D A++    +   G  P ++T+NI+++ +C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDG 252
            GR   A  +L ++   G +P+ +T+  ++   F  RK  LG  ++IL  M + G   + 
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILIN--FLCRKGLLGRAIDILEKMPKHGCQPNS 379

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  ++  F K  ++  A +Y+E+MV+ G   DIV+YNT++   CK+GK+E A  +L++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +  +G      T+  +IDGL KAG    A   L+ M       +   Y+ +V  L ++GK
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 373 IDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +D AI  F   E M V+ ++ T++S++  LCK ++   A   L+  +  G +  +++   
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559

Query: 429 VVDGLRHSGCRREA 442
           +++GL + G  +EA
Sbjct: 560 LIEGLAYEGMAKEA 573



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 7/377 (1%)

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V  N+ +    R   L      L+ M+  G  PD+    +L+    ++GK  +A ++ + 
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +      P   T+N+M++G CK    +NAL +   L +    P++VTYN +++ LC +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L+ A  +L  +      P+ ITYT +++   R+      +++L  M+ +G T D   Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++    K GRL EA  ++  M + G Q +++++N ++   C  G+   A  LL +M ++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F     T  ILI+ LC+ G +  A   LE M K G   N  +YN ++    K+ K+D AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
              E M  +    D  TY++M+  LCK  ++  A ++L      G   +      V+DGL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 434 RHSGCRREAKKIQSKIR 450
             +G   +A K+  ++R
Sbjct: 460 AKAGKTGKAIKLLDEMR 476



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 161/316 (50%), Gaps = 16/316 (5%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 166
           DV S N L   L + G+ +E  +  ++M+      D+ PCT     ++ G C+   T  A
Sbjct: 102 DVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRMGKTRKA 156

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            ++   L+  G VP+++TYN++I G CKAG +  A  +L  +  S   P+ +TY TI++ 
Sbjct: 157 AKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
              + K K  +E+L  M ++    D   Y  +I A  +   + +A   +++M   G   D
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPD 273

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +V+YN L+N  CKEG+L+ A   L++M   G + +  TH I++  +C  G    A   L 
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M + GF  ++  +N +++ L + G +  AI++ E M       +S +Y+ ++H  CK K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393

Query: 403 RLPSASKLLLSCLKSG 418
           ++  A + L   +  G
Sbjct: 394 KMDRAIEYLERMVSRG 409



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
           L+ V  N  +    + G+LE  +  L+ M   G   D    T LI G C+ G  + A   
Sbjct: 100 LEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKR 403
           LE +   G   ++  YN ++    K G+I++A++V + M V  D  TY++++ +LC + +
Sbjct: 160 LEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 404 LPSASKLL 411
           L  A ++L
Sbjct: 220 LKQAMEVL 227


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 213/431 (49%), Gaps = 4/431 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I V   CK+ R+  A  I+ D I  G  P+VVTYN LI+ +C+  + D    + N+M E
Sbjct: 240 TILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLE 299

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SPDV TYN LI G  +         LL EM++ G  P+  +YN+LM  L + GK  +
Sbjct: 300 NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID 359

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + Q M+  D  P   TFN+M++  CK    D A  +F+ +   G +P++ TYNI+I 
Sbjct: 360 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 419

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+A R+  AR +L+ + ++G  P+ +TY +I+    +  +     E+   ++  GY  
Sbjct: 420 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 479

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D     T+I    K  RL +A   + +M  +G   D+V+Y  LI+ +CK  +L+ +    
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G      T++I+ID LCK+  ++   + L+ M + G   +   Y  ++D L K 
Sbjct: 540 SEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKS 599

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
              D A  +++ M+         TY+ +V  LCK  RL  A  LL      G        
Sbjct: 600 DSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659

Query: 427 KAVVDGLRHSG 437
            +V DG   S 
Sbjct: 660 NSVFDGFWKSA 670



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 179/348 (51%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R    P   T+N++ID +C+    D  Y +   M + G  PD+ TYN +I+GA R + +
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 427

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  LL+ M E G PPDV +YNS++  L +  + DEA  V++ +  G       T + +
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++GLCK+R  D+A ++ R ++++G  P++V Y ILI G CKA +L  +     E+ D G 
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P  ITY+ ++    ++ + + G  +L  M  +G T D   Y +VI    K     EA +
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE 607

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             + M   G    +V+YN L++  CK  +L+ A  LL+ ME  G   D  T+  + DG  
Sbjct: 608 LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFW 667

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
           K+     A    + M   G       Y+ ++ +L  + K+D A+ ++E
Sbjct: 668 KSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWE 715



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 206/405 (50%), Gaps = 4/405 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK   +++A  +    +     PDV TYN+LID YC+      G  +L  M +
Sbjct: 275 NTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK 334

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ +TYN+L+    ++     + +L   ML     P  +++N ++    ++G+ D 
Sbjct: 335 YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDL 394

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +FQ M      P   T+NIM++G C+    D+A ++   + + G  P++VTYN ++ 
Sbjct: 395 AYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 454

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA ++  A  + + L + G+  + +T +T++    ++R+     ++L  M+R G   
Sbjct: 455 GLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 514

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I  F K  +L ++  +  +M+  G    +++Y+ +I+  CK  ++    +LL
Sbjct: 515 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 574

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M ++G   D   +T +IDGLCK+ +   A    + M + G    +  YN +VD+L K 
Sbjct: 575 KTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKV 634

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            ++D AI++ E ME    + D+ TY+S+     K+     A +L 
Sbjct: 635 SRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLF 679



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 40/445 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD +TY+ LI+ +C+   F   Y +L+ M + GI P    YN++I G   N  +  +L  
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +M +    P V +Y  L+  L +  +  +A+ + +DMI     P   T+N ++NG CK
Sbjct: 225 YRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ +F  + ++   P++ TYNILI G CK  R +    +L+E+   G  PN IT
Sbjct: 284 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343

Query: 220 YTTIMKCCFRNRKY-----------------------------------KLGLEILSAMK 244
           Y T+M    ++ KY                                    L  E+   M 
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   D + Y  +I+   +  R+ +A   +E+M   G   D+V+YN++++  CK  +++
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            AY + + +   G+  D  T + LIDGLCK+  +  A   L  M + G   ++ AY  ++
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
               K  ++D ++  F  M     V    TYS ++  LCK+ R+     LL + L+ GV 
Sbjct: 524 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVT 583

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
                  +V+DGL  S    EA ++
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYEL 608



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 192/379 (50%), Gaps = 5/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T N L+ A+ +       Y +    R    SPD +TY++LI G  +      +  LLDEM
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
            + GI P    YN+++  L   G+ D A   ++DM   +  P   T+ I+++ LCK+   
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARI 252

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
            +A  +   + + G  P +VTYN LI G CK G +  A  +  ++ ++  +P+  TY  +
Sbjct: 253 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 312

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  + + G ++L  M + G   +   Y T++ + VK G+  +A +  + M+    
Sbjct: 313 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +    ++N +I+++CK G+L+ AY L   M  +G   D YT+ I+I G C+A  I  AR 
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
            LE M + G   ++  YN IV  L K  ++D A  V+E +       D  T S+++  LC
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 492

Query: 400 KAKRLPSASKLLLSCLKSG 418
           K++RL  A KLL    ++G
Sbjct: 493 KSRRLDDAEKLLREMERNG 511



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 5/342 (1%)

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           ++ N L+    +  K  EA  +F++  CG  +P + T++ ++NG CK R    A R+   
Sbjct: 133 FTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDE 192

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++K G VP    YN +IKGLC  GR+ +A    +++     AP+ ITYT ++    ++ +
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSAR 251

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
                 IL  M   G   +   Y T+I  F K+G + EA     QM+ +    D+ +YN 
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           LI+ YCK+ + +    LL EM K G E +  T+  L+D L K+G    A    + M +  
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
              +   +N ++D   K G++D A  +F+ M     + D +TY+ M+   C+A R+  A 
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +LL    ++G         ++V GL  +    EA ++   +R
Sbjct: 432 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+ANR++ A  ++      G  PDVVTYN ++   C+    D  Y +   +R 
Sbjct: 415 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 474

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DVVT ++LI G  ++  L  +  LL EM   G  PDV +Y  L+H   +  + D+
Sbjct: 475 GGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDK 534

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +   F +M+     P   T++I+++ LCK+    +   + + + + G  P+ + Y  +I 
Sbjct: 535 SLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVID 594

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+     A  + K +  +G AP  +TY  ++    +  +    + +L  M+  G   
Sbjct: 595 GLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLP 654

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V   F K     +A    + M + G       Y+ L+     E K++ A  + 
Sbjct: 655 DTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIW 714

Query: 311 DEMEKQGFECD 321
           +E  + G + D
Sbjct: 715 EEALEAGADVD 725


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 233/438 (53%), Gaps = 8/438 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C A  L  A  ++ +    G  PD  T+  +I A       D     ++ +R  G  P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY +LIA   R   L  ++ LL+EM E G PP++ +YN L+  L +L     A  V + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI G   P   TFN +++G CK    D+A ++   +   G  P +VTY+ LI GLCK+ +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
              A+ +L+E+  SG  P+A TY+ ++    +  K +   ++L  M   G T D   Y +
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I AF K G+L EA   +++M       D+V+YNT+I+  CK GK+  A ++LD+M++ G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 318 -FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  T++ +I+GLCK+  +  A+  L+ M K G + ++  Y  I+D L K G+++ A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             + + M+      +  TY++++  LCKA+++  A +++     +G          +V+G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 433 LRHSGCRREAKKIQSKIR 450
           L  SG  +EA+++  +++
Sbjct: 418 LCVSGRIKEAQQLVQRMK 435



 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 213/405 (52%), Gaps = 7/405 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  F +A +LE+A  ++ +    G  P++VTYN+L+DA C+     A   ++ +M E G 
Sbjct: 64  IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 123

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P+V+T+NSL+ G  +   +  +  LL  M+  G+ P+V +Y++L+  L +  K  EA  
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V ++M    +TP   T++ +++GLCK    + A +M R +   G  P++V Y+ +I   C
Sbjct: 184 VLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 243

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF-DG 252
           K+G+L  A+  L+E+     +P+ +TY T++    +  K      IL  M+  G    D 
Sbjct: 244 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV 303

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y TVI    K   L EA   +++M   G   D+V+Y T+I+  CK G+LE A  LL  
Sbjct: 304 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M++ G   +  T+T LI GLCKA  +  A   +E M   G   NL  YN +V+ L   G+
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 423

Query: 373 IDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           I  A  + + M+        D+ TY ++V+ L  +  +  A +LL
Sbjct: 424 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLL 468



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 202/376 (53%), Gaps = 3/376 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   CK + +  A+ ++   I  G  P+V+T+N L+D +C+  + D    +L  M  
Sbjct: 96  NVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA 155

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTY++LI G  ++     + ++L+EM   G+ PD ++Y++L+H L +  K +E
Sbjct: 156 KGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEE 215

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + M     TP    ++ +++  CK+     A +  + ++K    P++VTYN +I 
Sbjct: 216 AEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID 275

Query: 191 GLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           GLCK G++  A+ IL ++ +SG   P+ +TY+T++    ++       ++L  M + G  
Sbjct: 276 GLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN 335

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K GRL+EA   ++ M   G   ++V+Y TLI+  CK  K++ A  +
Sbjct: 336 PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERV 395

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRL 367
           ++EM   G   +  T+  +++GLC +G IK A+  ++ M     + + +A  Y  IV+ L
Sbjct: 396 MEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455

Query: 368 GKDGKIDHAINVFESM 383
                +  A  + E M
Sbjct: 456 MSSDLVQEAEQLLEQM 471



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 8/405 (1%)

Query: 53  CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           C      A   +L  M+ AG +PD  T+  +I        L  ++D L  M   G  P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
            +Y +L+    +  K +EA ++ ++M      P   T+N++++ LCK      A  + + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           + + GF P ++T+N L+ G CK G +  AR +L  +   G  PN +TY+ ++    +++K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
           +    E+L  MK  G T D F Y  +I    K  +++EA   + +M   G   D+V Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I+ +CK GKL  A   L EM KQ    D  T+  +IDGLCK G I  A++ L+ M + G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 353 -FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 407
               ++  Y+ +++ L K   +  A  + + M       D  TY++++  LCK  RL  A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
             LL    ++G          ++ GL  +    EA+++  ++R A
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 402



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 7/267 (2%)

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C AG L  A  +L+E+  +G AP+A T+T I+            ++ L +M   G   + 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +IAAF +  +L+EA   +E+M   G   ++V+YN L++  CK   + AA  ++ +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M + GF  +  T   L+DG CK GN+  AR  L  M   G   N+  Y+ ++D L K  K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
              A  V E M+      D+FTYS+++H LCKA ++  A ++L     SG         +
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 429 VVDGLRHSGCRREAKKIQSKIRMAKIS 455
           ++     SG   EA+K   ++R  + S
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKS 264


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 223/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD VTYN  +   CQ         +++ M 
Sbjct: 268 VNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLML 327

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN++I   ++N  L  +  ++++M++ G  PD  ++N+L+  L    + +
Sbjct: 328 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLE 387

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + +++    L+P   TFNI++N LCK       +R+F  ++  G  P+ VTYNILI
Sbjct: 388 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILI 447

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +LKE+  +G   + +TY TI+    +  + +   E+   M   G +
Sbjct: 448 DHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS 507

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                + T+I    K  R+ +AT+ +EQMV +G+Q   ++YN+++  YCK+G L+ A  +
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI 567

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   GFE D  T+  LI+GLCKAG  + A   L  M   G     +AYN ++  L +
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
              +  A+++F  M    E  D+ TY  +   LC+    +  A   L+  +  G     S
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 688 SFRMLAEGLLNLG 700



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 206/412 (50%), Gaps = 5/412 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V ++ +  R + A  ++ + +   GV  D   YN L++   +        ++ N M + G
Sbjct: 131 VESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRG 190

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           I PDVVT N+LI    R   +  ++ +L+EM    + PD  ++ +LM    + G  + A 
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAAL 250

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           RV   M+    +P   T N+++NG CK    ++AL   +     GF P+ VTYN  +  L
Sbjct: 251 RVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCL 310

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C+ G +  A  ++  +   GH P+  TY T++ C  +N +      I++ M  +G   D 
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             + T+I A     RL+EA D   ++   G+  D+ ++N LIN  CK G       L +E
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M+  G   D+ T+ ILID LC  G +  A   L+ M   G   +   YN I+D L K  +
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490

Query: 373 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           I+ A  VF+ M+     + + T+++++  LCKAKR+  A++L+   +K G++
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 542



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 205/437 (46%), Gaps = 4/437 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +   C+A+++  A  ++ +     V PD  T+  L+  + +  S +A   +  +M 
Sbjct: 198 LNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMM 257

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G SP  VT N LI G  +   +  +L  + + +  G  PD  +YN+ +HCL Q G   
Sbjct: 258 ETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVS 317

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A +V   M+     P   T+N ++N L KN   D A  +   +   G +P+  T+N LI
Sbjct: 318 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 377

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC   RL  A  + +EL   G +P+  T+  ++    +     LG+ +   MK  G  
Sbjct: 378 VALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCA 437

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I     +G+L  A D +++M ++G     V+YNT+I+  CK+ ++E A  +
Sbjct: 438 PDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEV 497

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D+M+  G      T   LIDGLCKA  I  A   +E M K G   +   YN I+    K
Sbjct: 498 FDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCK 557

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A ++ E+M       D  TY ++++ LCKA R   A KLL      G+R    A
Sbjct: 558 QGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 617

Query: 426 QKAVVDGLRHSGCRREA 442
              V+  L      R+A
Sbjct: 618 YNPVIQSLFRRNNLRDA 634



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 1/211 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+    VT+N LID  C+    D    ++
Sbjct: 474 STVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M + G+ P  +TYNS++    +   L  + D+L+ M   G   DV +Y +L++ L + 
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKA 593

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A ++ + M    + P    +N ++  L +     +AL +FR + + G  P+ +TY
Sbjct: 594 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTY 653

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAP 215
            I+ +GLC+  G ++ A   L E+ + G  P
Sbjct: 654 KIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP 684



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 136/304 (44%), Gaps = 8/304 (2%)

Query: 153 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L  L +    + AL+M    L +  F P    Y  +I+ L  AG       +++E+   
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           GH   A    + ++   R R++   ++++ + +   G   D   Y  ++    +  R+K 
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
                 +M   G+Q D+V+ NTLI   C+  ++  A L+L+EM       D+ T T L+ 
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF- 389
           G  + G+I+ A      M + G        N +++   K G+++ A+   +  E+ D F 
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQK-EIADGFE 297

Query: 390 ----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               TY++ VH LC+   +  A K++   L+ G          V++ L  +G   EAK I
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357

Query: 446 QSKI 449
            +++
Sbjct: 358 VNQM 361


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 224/421 (53%), Gaps = 7/421 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC++ +  KA  I+      G +PDV+TYN+LI  YC+    D    +L RM    ++PD
Sbjct: 152 FCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPD 208

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+++     +  L  ++++LD  ++    PDV +Y  L+          +A ++  
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+N+++NG+CK    D A++    +  +G  P ++T+NI+++ +C  G
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L ++   G +P+ +T+  ++    R R     +++L  M + G   +   Y 
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F +  ++  A +Y+E MV+ G   DIV+YNTL+   CK+GK +AA  +L+++  +
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G      T+  +IDGL K G  + A   LE M + G   ++  Y+ ++  LG +GK+D A
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508

Query: 377 INVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F  ME   +K S  TY++++  LCKA++   A   L   ++ G +  K+    +++G
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568

Query: 433 L 433
           +
Sbjct: 569 I 569



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 184/355 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C + +L++A  ++   ++    PDV+TY +LI+A C          +L+ MR+
Sbjct: 213 NTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 272

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTYN LI G  +   L  ++  L+ M   G  P+V ++N ++  +   G+  +
Sbjct: 273 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMD 332

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+  DM+    +P   TFNI++N LC+ R    A+ +   + KHG +P  ++YN L+ 
Sbjct: 333 AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+  ++  A   L+ +   G  P+ +TY T++    ++ K    +EIL+ +  KG + 
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y TVI    K+G+ + A + +E+M   G++ DI++Y+TL+     EGK++ A  + 
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
            +ME    +    T+  ++ GLCKA     A   L YM + G       Y  +++
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 178/366 (48%), Gaps = 7/366 (1%)

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           RN  L   L  L+ M+  G  PDV +  SL+    + GK  +A R+ + +      P   
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+N+++ G CK+   D AL++   L++    P++VTYN +++ LC +G+L+ A  +L   
Sbjct: 179 TYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                 P+ ITYT +++    +      +++L  M++KG   D   Y  +I    K GRL
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA  ++  M   G Q +++++N ++   C  G+   A  LL +M ++G      T  IL
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I+ LC+   +  A   LE M K G   N  +YN ++    ++ K+D AI   E M  +  
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY++++  LCK  +  +A ++L      G   +      V+DGL   G    A +
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 445 IQSKIR 450
           +  ++R
Sbjct: 476 LLEEMR 481



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 155/304 (50%), Gaps = 9/304 (2%)

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           ++ N  +  L + G+ +E  +  + MI     P       ++ G C++  T  A R+   
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           L+  G VP+++TYN+LI G CK+G +  A  +L+ +     AP+ +TY TI++    + K
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 233 YKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            K  +E+L   M+R+ Y  D   Y  +I A      + +A   +++M   G + D+V+YN
Sbjct: 225 LKEAMEVLDRQMQRECYP-DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            LIN  CKEG+L+ A   L+ M   G + +  TH I++  +C  G    A   L  M + 
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           G   ++  +N +++ L +   +  AI+V E M     + +S +Y+ ++H  C+ K++  A
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403

Query: 408 SKLL 411
            + L
Sbjct: 404 IEYL 407



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 7/200 (3%)

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           +F+ F     +   V+ G L+E   ++E+M+  G   D+++  +LI  +C+ GK   A  
Sbjct: 104 SFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATR 163

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +++ +E  G   D  T+ +LI G CK+G I  A   L+ + ++    ++  YN I+  L 
Sbjct: 164 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVTYNTILRSLC 220

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             GK+  A+ V +    +    D  TY+ ++   C    +  A KLL    K G +    
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280

Query: 425 AQKAVVDGLRHSGCRREAKK 444
               +++G+   G   EA K
Sbjct: 281 TYNVLINGICKEGRLDEAIK 300



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 68/147 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  + + A  I+      G  P ++TYN +ID   +    +    +L  MR 
Sbjct: 423 NTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRR 482

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY++L+ G      +  ++ +  +M  + I P   +YN++M  L +  +   
Sbjct: 483 KGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 542

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGL 157
           A      M+     P  AT+ I++ G+
Sbjct: 543 AIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 233/434 (53%), Gaps = 15/434 (3%)

Query: 17  FCKANRLEKAEAI--IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           FC+  +  KA  I  I++G   G +PDV+TYN++I  YC+    +   ++L+RM    +S
Sbjct: 147 FCRLGKTRKAAKILEILEGS--GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVS 201

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PDVVTYN+++     +  L  ++++LD ML+    PDV +Y  L+    +      A ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             +M     TP   T+N+++NG+CK    D A++    +   G  P ++T+NI+++ +C 
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDG 252
            GR   A  +L ++   G +P+ +T+  ++   F  RK  LG  ++IL  M + G   + 
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILIN--FLCRKGLLGRAIDILEKMPQHGCQPNS 379

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  ++  F K  ++  A +Y+E+MV+ G   DIV+YNT++   CK+GK+E A  +L++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +  +G      T+  +IDGL KAG    A   L+ M       +   Y+ +V  L ++GK
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 373 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +D AI  F   E      ++ T++S++  LCK+++   A   L+  +  G +  +++   
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 429 VVDGLRHSGCRREA 442
           +++GL + G  +EA
Sbjct: 560 LIEGLAYEGMAKEA 573



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 7/377 (1%)

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V  N+ +    R   L      L+ M+  G  PD+    +L+    +LGK  +A ++ + 
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +      P   T+N+M++G CK    +NAL +   L +    P++VTYN +++ LC +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L+ A  +L  +      P+ ITYT +++   R+      +++L  M+ +G T D   Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++    K GRL EA  ++  M + G Q +++++N ++   C  G+   A  LL +M ++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F     T  ILI+ LC+ G +  A   LE M + G   N  +YN ++    K+ K+D AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
              E M  +    D  TY++M+  LCK  ++  A ++L      G   +      V+DGL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 434 RHSGCRREAKKIQSKIR 450
             +G   +A K+  ++R
Sbjct: 460 AKAGKTGKAIKLLDEMR 476



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 158/309 (51%), Gaps = 16/309 (5%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 166
           DV S N L   + + G+ +E  +  ++M+      D+ PCT     ++ G C+   T  A
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRLGKTRKA 156

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            ++   L+  G VP+++TYN++I G CKAG +  A  +L  +  S   P+ +TY TI++ 
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
              + K K  +E+L  M ++    D   Y  +I A  +   +  A   +++M   G   D
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +V+YN L+N  CKEG+L+ A   L++M   G + +  TH I++  +C  G    A   L 
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M + GF  ++  +N +++ L + G +  AI++ E M       +S +Y+ ++H  CK K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393

Query: 403 RLPSASKLL 411
           ++  A + L
Sbjct: 394 KMDRAIEYL 402



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V     L+ V  N  +    + G+LE  +  L+ M   G   D    T LI G C+ G  
Sbjct: 94  VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHN 397
           + A   LE +   G   ++  YN ++    K G+I++A++V + M V  D  TY++++ +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213

Query: 398 LCKAKRLPSASKLL 411
           LC + +L  A ++L
Sbjct: 214 LCDSGKLKQAMEVL 227


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 223/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD +TYN  ++  CQ         +++ M 
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN ++    +N  L  +  +L++M+E G  PD+ ++N+L+  L    + +
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    L+P   TFNI++N LCK      ALR+F  ++  G  P+ VTYN LI
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +LKE+  +G   + +TY TI+    +  + +   E+   M  +G +
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I    K  R+ +A   + QM+++G+Q + ++YN+++  YCK+G ++ A  +
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 557

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M   GFE D  T+  LI+GLCKAG  + A   L  M   G  +  +AYN ++  L +
Sbjct: 558 LQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFR 617

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
                 A+N+F  M    E  D+FTY  +   LC+    +  A   LL  +  G     S
Sbjct: 618 RNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFS 677

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 678 SFRMLAEGLLNLG 690



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 200/389 (51%), Gaps = 4/389 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+  D V YN L++   +        T+ + M E GI PDVVT+N+L+    R   +  
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRT 203

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ +L+EM   G+ PD  ++ +LM    + G    A RV   M+    +P   T N+++N
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK    ++AL   +    +GF P+ +TYN  + GLC+ G +  A  ++  +   GH P
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY  ++ C  +N + +    IL+ M  +G   D   + T+I A     RL+EA D  
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            Q+   G+  D+ ++N LIN  CK G  + A  L +EM+  G   D+ T+  LID LC  
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G +  A   L+ M   G   +   YN I+D L K  +I+ A  VF+ M++    +++ T+
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 503

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           ++++  LCK KR+  A++L+   +  G++
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQ 532



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 221/473 (46%), Gaps = 43/473 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LLN+ V    + ++++  E +  +    G+ PDVVT+N L+ A C+         +L  M
Sbjct: 156 LLNVLV----EGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 211

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             +G++PD  T+ +L+ G      +  +L +   MLEMG  P   + N L++   +LG+ 
Sbjct: 212 SSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A    Q  I     P   T+N  +NGLC+N +  +AL++   + + G  P++ TYNI+
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNR---------------- 231
           +  LCK G+L  A+ IL ++ + G  P+  T+ T I+  C  NR                
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGL 391

Query: 232 ------------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
                               +L L +   MK  G T D   Y T+I     +G+L +A D
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +++M + G     V+YNT+I+  CK+ ++E A  + D+M+ QG   +  T   LIDGLC
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 511

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           K   I  A   +  M   G   N   YN I+    K G I  A ++ ++M       D  
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           TY ++++ LCKA R   A KLL      G+R    A   V+  L      R+A
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDA 624



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 172/365 (47%), Gaps = 45/365 (12%)

Query: 137 DMICGDLTPC------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           D++   L P       T  +N +LN L +         ++  + + G  P++VT+N L+K
Sbjct: 134 DLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMK 193

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+A ++RTA  +L+E+  SG AP+  T+TT+M+        K  L + + M   G + 
Sbjct: 194 ALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSP 253

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                  +I  + K+GR+++A  Y++Q + +G + D ++YNT +N  C+ G +  A  ++
Sbjct: 254 TKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVM 313

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM---------------------- 348
           D M ++G + D +T+ I+++ LCK G ++ A+  L  M                      
Sbjct: 314 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSG 373

Query: 349 NKI-------------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           N++             G   ++  +N +++ L K G    A+ +FE M+      D  TY
Sbjct: 374 NRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTY 433

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           ++++ NLC   +L  A  LL     +G          ++DGL       EA+++  ++ +
Sbjct: 434 NTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDL 493

Query: 452 AKISH 456
             IS 
Sbjct: 494 QGISR 498



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 1/216 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+  + +T+N LID  C+    D    ++
Sbjct: 464 STVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLI 523

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M   G+ P+ +TYNS++    +   +  + D+L  M   G   DV +Y +L++ L + 
Sbjct: 524 SQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKA 583

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A ++ + M    +      +N ++  L +   T +A+ +FR + + G  P+  TY
Sbjct: 584 GRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTY 643

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAPNAITY 220
            I+ +GLC+  G +R A   L E+ D G  P   ++
Sbjct: 644 KIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSF 679


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 222/421 (52%), Gaps = 5/421 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV +YN +I  + +    D+   + +RMR  G SPDVVTYN +I        L  + ++
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           +DE+L+ G  P V +Y  L+      G+ +EA  +F +++   L P   T+N ++ G+CK
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D AL   R L   G  P++V+YNIL++      R      ++K++  SG  PN +T
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           ++ ++    R  + +  + +L  MK KG T D + Y  +I+AF K GRL  A +Y+E+MV
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           +DG   DIV+YNT++   CK G  + A  + +++++ G       +  +   L   GN  
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A   +  M + G D +   YN ++  L +DG +D AI +   ME         +++ ++
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI-RMAKI 454
             +CKA R+    +LL++ ++ G    +++   +++G+ ++G R EA ++ + + R+  I
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548

Query: 455 S 455
           S
Sbjct: 549 S 549


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 227/430 (52%), Gaps = 7/430 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+  + +KA  ++    + G +PDV+TYN+LI  YC+    D    +L+RM    ++PD
Sbjct: 102 FCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPD 158

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+++     +  L  ++++LD  L+    PDV +Y  L+    +     +A ++  
Sbjct: 159 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 218

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+N+++NG+CK    D A++    +  +G  P ++T+NI+++ +C  G
Sbjct: 219 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 278

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L ++   G +P+ +T+  ++    R       ++IL  M   G T +   Y 
Sbjct: 279 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 338

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F K  ++  A +Y++ MV+ G   DIV+YNTL+   CK+GK++ A  +L+++  +
Sbjct: 339 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G      T+  +IDGL K G  + A   L+ M + G   ++  Y+ +V  L ++GK+D A
Sbjct: 399 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 458

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I  F  +E      ++ TY+S++  LCK+++   A   L   +    +  ++    +++G
Sbjct: 459 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 518

Query: 433 LRHSGCRREA 442
           + + G  +EA
Sbjct: 519 IAYEGLAKEA 528



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  +CK+  ++ A  ++    R+ V PDVVTYN ++   C          +L+R  +
Sbjct: 131 NVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PDV+TY  LI    + S +  ++ LLDEM   G  PDV +YN L++ + + G+ DE
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +   +M      P   T NI+L  +C      +A ++   + + G  P +VT+NILI 
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G L  A  IL+++   G  PN+++Y  ++    + +K    +E L  M  +G   
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T++ A  K G++  A + + Q+ + G    +++YNT+I+   K GK E A  LL
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM ++G + D  T++ L+ GL + G +  A      +  +G   N   YN I+  L K 
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 487

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            + D AI+    M  K       TY+ ++  +        A  LL      G+    SA+
Sbjct: 488 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAE 547

Query: 427 KAVV 430
           +  V
Sbjct: 548 QVAV 551



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 7/366 (1%)

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           RN  L      L+ M+  G  PD+    SL+    ++GK  +A  V + +      P   
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+N++++G CK+   DNAL++   L +    P++VTYN +++ LC +G+L+ A  +L   
Sbjct: 129 TYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                 P+ ITYT +++   +       +++L  M+ KG   D   Y  +I    K GRL
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA  ++  M + G Q +++++N ++   C  G+   A  LL +M ++G      T  IL
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I+ LC+ G +  A   LE M   G   N  +YN ++    K+ K+D AI   + M  +  
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY++++  LCK  ++  A ++L      G   +      V+DGL   G    A K
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 445 IQSKIR 450
           +  ++R
Sbjct: 426 LLDEMR 431



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +++ A  I+      G  P ++TYN +ID   +    +    +L+ MR 
Sbjct: 373 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 432

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+SL++G +R   +  ++    ++  +GI P+  +YNS+M  L +  + D 
Sbjct: 433 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 492

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      MI     P  AT+ I++ G+        AL +   L   G V +     + +K
Sbjct: 493 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            V+ G L++   ++E MV  G   DI+   +LI  +C+ GK + A  +++ +E+ G   D
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+ +LI G CK+G I  A   L+ ++++    ++  YN I+  L   GK+  A+ V +
Sbjct: 127 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
               K    D  TY+ ++   CK   +  A KLL      G +        +++G+   G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 438 CRREAKK 444
              EA K
Sbjct: 244 RLDEAIK 250


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 227/430 (52%), Gaps = 7/430 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+  + +KA  ++    + G +PDV+TYN+LI  YC+    D    +L+RM    ++PD
Sbjct: 159 FCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPD 215

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+++     +  L  ++++LD  L+    PDV +Y  L+    +     +A ++  
Sbjct: 216 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 275

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+N+++NG+CK    D A++    +  +G  P ++T+NI+++ +C  G
Sbjct: 276 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 335

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L ++   G +P+ +T+  ++    R       ++IL  M   G T +   Y 
Sbjct: 336 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F K  ++  A +Y++ MV+ G   DIV+YNTL+   CK+GK++ A  +L+++  +
Sbjct: 396 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G      T+  +IDGL K G  + A   L+ M + G   ++  Y+ +V  L ++GK+D A
Sbjct: 456 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEA 515

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I  F  +E      ++ TY+S++  LCK+++   A   L   +    +  ++    +++G
Sbjct: 516 IKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG 575

Query: 433 LRHSGCRREA 442
           + + G  +EA
Sbjct: 576 IAYEGLAKEA 585



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  +CK+  ++ A  ++    R+ V PDVVTYN ++   C          +L+R  +
Sbjct: 188 NVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PDV+TY  LI    + S +  ++ LLDEM   G  PDV +YN L++ + + G+ DE
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +   +M      P   T NI+L  +C      +A ++   + + G  P +VT+NILI 
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G L  A  IL+++   G  PN+++Y  ++    + +K    +E L  M  +G   
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T++ A  K G++  A + + Q+ + G    +++YNT+I+   K GK E A  LL
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM ++G + D  T++ L+ GL + G +  A      +  +G   N   YN I+  L K 
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 544

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            + D AI+    M  K       TY+ ++  +        A  LL      G+    SA+
Sbjct: 545 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAE 604

Query: 427 KAVV 430
           +  V
Sbjct: 605 QVAV 608



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 7/366 (1%)

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           RN  L      L+ M+  G  PD+    SL+    ++GK  +A  V + +      P   
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+N++++G CK+   DNAL++   L +    P++VTYN +++ LC +G+L+ A  +L   
Sbjct: 186 TYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                 P+ ITYT +++   +       +++L  M+ KG   D   Y  +I    K GRL
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA  ++  M + G Q +++++N ++   C  G+   A  LL +M ++G      T  IL
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I+ LC+ G +  A   LE M   G   N  +YN ++    K+ K+D AI   + M  +  
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY++++  LCK  ++  A ++L      G   +      V+DGL   G    A K
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 445 IQSKIR 450
           +  ++R
Sbjct: 483 LLDEMR 488



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +++ A  I+      G  P ++TYN +ID   +    +    +L+ MR 
Sbjct: 430 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 489

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+SL++G +R   +  ++    ++  +GI P+  +YNS+M  L +  + D 
Sbjct: 490 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 549

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      MI     P  AT+ I++ G+        AL +   L   G V +     + +K
Sbjct: 550 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 7/187 (3%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            V+ G L++   ++E MV  G   DI+   +LI  +C+ GK + A  +++ +E+ G   D
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+ +LI G CK+G I  A   L+ ++++    ++  YN I+  L   GK+  A+ V +
Sbjct: 184 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
               K    D  TY+ ++   CK   +  A KLL      G +        +++G+   G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 438 CRREAKK 444
              EA K
Sbjct: 301 RLDEAIK 307


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/416 (33%), Positives = 216/416 (51%), Gaps = 11/416 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   R+  A+A+    I+ G  PDVVTYN L+  +C+    D    I +   +
Sbjct: 14  NALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVK 73

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTYN+LI G  +   L  +  +L  M+   + PDV +YNSL++ L + G+ DE
Sbjct: 74  RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDE 133

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A  +  D      +P   T++ +++GLC+  R    AL++F  + K G+ PE+ TYNILI
Sbjct: 134 ARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILI 190

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL K  R+  A  +   L   G  P+AITYT  +    +  + +  L +L  M  KG  
Sbjct: 191 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 250

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  VI    K  R+ EA   +  M   G   + +S+NTLI   C+ GK + A   
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 310

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKA---GNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             EM K+G +    T+ IL+DGLCKA   G IK A    + M + G   ++  Y+ ++D 
Sbjct: 311 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 370

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           LGK GK+D A  +  +ME K    + +TY+S++  LC  +++  A +L ++ ++ G
Sbjct: 371 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKG 426



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/385 (34%), Positives = 198/385 (51%), Gaps = 15/385 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+ +TYN L+   C          +  RM +AG SPDVVTYN+L+ G  +   L  +
Sbjct: 5   GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + D  ++ G  PDV +YN+L++   +  K DEA R+ Q M+  +L P   T+N ++NG
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD---SGH 213
           LCKN   D A RM   +   GF P ++TY+ LI GLC+   LR     LK  G     G+
Sbjct: 125 LCKNGRVDEA-RML--IVDKGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLKQGY 179

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P   TY  ++    +  +     E+ S + + G   D   Y   I    K GR+++A  
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            ++ M   G   D+VS+N +IN  CKE +++ A +LL  ME +G   +  +   LI G C
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK---DGKIDHAINVFESM----EVK 386
           +AG  K A    + M K G    +  YN +VD L K   +G+I  AI +F++M     V 
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           D  TYS+++  L KA +L  A +LL
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLL 384



 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 207/386 (53%), Gaps = 11/386 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MR+ G  P+ +TYN+L++G      +S +  L + M++ G  PDV +YN+L+H   ++G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA ++F   +     P   T+N ++NG CK    D A R+ + +     VP++VTYN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRK 246
           L+ GLCK GR+  AR ++    D G +PN ITY+T++   C   R     L++  ++ ++
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  +   Y  +I   +K  R+ EA +    +V  G++ D ++Y   I+  CK G++E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            L+L +M+++G   D  +H  +I+GLCK   +  A + L  M   G   N  ++N ++  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 367 LGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAK---RLPSASKLLLSCLKSGV 419
             + GK   A+  F+ M    VK +  TY+ +V  LCKA+   R+  A  L  + ++ G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
                   A++DGL  +G   +A+++
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRL 383



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 169/384 (44%), Gaps = 71/384 (18%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   L++A  I    ++ G +PDVVTYN LI+ +C+    D    IL RM    + PD
Sbjct: 55  FCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPD 114

Query: 77  VVTYNSLIAGATRNSLL---------------------------------SCSLDLLDEM 103
           VVTYNSL+ G  +N  +                                 S +L L   +
Sbjct: 115 VVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           L+ G  P+V +YN L+  L +  + +EA  +F  ++   L P   T+ + ++GLCK    
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           ++AL M + + + G VP++V++N +I GLCK  R+  A  +L  +   G +PNAI++ T+
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 224 MKCCFRNRKYKLGLE--------------------------------------ILSAMKR 245
           +    R  K+K  +                                       +  AM  
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG   D   Y  +I    K G+L +A   +  M   G   ++ +YN+LI+  C   K++ 
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 306 AYLLLDEMEKQGFECDKYTHTILI 329
           A  L   M ++G   D  T+  +I
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTII 438



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 3/254 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +    K +R+ +A  +    ++ G+ PD +TY + ID  C+    +    +L  M E
Sbjct: 187 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 246

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVV++N++I G  +   +  +  LL  M   G  P+  S+N+L+    + GK  +
Sbjct: 247 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 306

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT---DNALRMFRGLQKHGFVPELVTYNI 187
           A   F++M+   + P   T+NI+++GLCK R       A+ +F  + + G VP++VTY+ 
Sbjct: 307 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 366

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL KAG+L  AR +L  +   G  PN  TY +++       K    LE+  AM  KG
Sbjct: 367 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKG 426

Query: 248 YTFDGFGYCTVIAA 261
              D   Y T+I+A
Sbjct: 427 CVPDTITYGTIISA 440



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 138/265 (52%), Gaps = 3/265 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ G  P+V TYN+LID   +    +  + + + + + G+ PD +TY   I G  +   +
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L +L +M E G  PDV S+N++++ L +  + DEA  +   M     +P   +FN +
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA---GRLRTARWILKELGD 210
           + G C+      A+  F+ + K G  P +VTYNIL+ GLCKA   GR++ A  +   + +
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ +TY+ ++    +  K      +L AM+ KG   + + Y ++I+    + ++ E
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLIN 295
           A +    MV  G   D ++Y T+I+
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTIIS 439


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN LI+ +C+    D    +L+RMR    SPD VTYN +I        L  +L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+++L     P V +Y  L+      G  DEA ++  +M+   L P   T+N ++ G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A  M R L+  G  P++++YNIL++ L   G+      ++ ++      PN +T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R+ K +  + +L  MK KG T D + Y  +IAAF + GRL  A +++E M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           +DG   DIV+YNT++   CK GK + A  +  ++ + G   +  ++  +   L  +G+ I
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSM 394
           +   + LE M+  G D +   YN ++  L ++G +D A  +   M   E   S  TY+ +
Sbjct: 456 RALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAK 453
           +   CKA R+  A  +L S + +G R  ++    +++G+  +G R EA ++ +  +R+  
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA 574

Query: 454 ISH 456
           IS 
Sbjct: 575 ISE 577



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 179/361 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   +L+ A  ++   +     P V+TY +LI+A       D    +++ M  
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+ TYN++I G  +  ++  + +++  +   G  PDV SYN L+  L   GK +E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEE 316

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++   M      P   T++I++  LC++   + A+ + + +++ G  P+  +Y+ LI 
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ GRL  A   L+ +   G  P+ + Y T++    +N K    LEI   +   G + 
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+ +A    G    A   + +M+++G+  D ++YN++I+  C+EG ++ A+ LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M    F     T+ I++ G CKA  I+ A   LE M   G   N   Y  +++ +G  
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556

Query: 371 G 371
           G
Sbjct: 557 G 557



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 4/279 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +       + E+ E ++         P+VVTY++LI   C+    +    +L  M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD  +Y+ LIA   R   L  +++ L+ M+  G  PD+ +YN+++  L + GK D+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  +     +P ++++N M + L  +     AL M   +  +G  P+ +TYN +I 
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G +  A  +L ++      P+ +TY  ++    +  + +  + +L +M   G   
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
           +   Y  +I      G   EA     ++  D V++D +S
Sbjct: 542 NETTYTVLIEGIGFAGYRAEAM----ELANDLVRIDAIS 576



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 35/203 (17%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG- 72
           +  FC+  RL+ A   +   I  G LPD+V YN ++   C+    D    I  ++ E G 
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434

Query: 73  ----------------------------------ISPDVVTYNSLIAGATRNSLLSCSLD 98
                                             I PD +TYNS+I+   R  ++  + +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M      P V +YN ++    +  + ++A  V + M+     P   T+ +++ G+ 
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554

Query: 159 KNRYTDNALRMFRGLQKHGFVPE 181
              Y   A+ +   L +   + E
Sbjct: 555 FAGYRAEAMELANDLVRIDAISE 577


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN LI+ +C+    D    +L+RMR    SPD VTYN +I        L  +L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+++L     P V +Y  L+      G  DEA ++  +M+   L P   T+N ++ G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A  M R L+  G  P++++YNIL++ L   G+      ++ ++      PN +T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R+ K +  + +L  MK KG T D + Y  +IAAF + GRL  A +++E M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           +DG   DIV+YNT++   CK GK + A  +  ++ + G   +  ++  +   L  +G+ I
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSM 394
           +   + LE M+  G D +   YN ++  L ++G +D A  +   M   E   S  TY+ +
Sbjct: 456 RALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAK 453
           +   CKA R+  A  +L S + +G R  ++    +++G+  +G R EA ++ +  +R+  
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA 574

Query: 454 ISH 456
           IS 
Sbjct: 575 ISE 577



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 179/361 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   +L+ A  ++   +     P V+TY +LI+A       D    +++ M  
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+ TYN++I G  +  ++  + +++  +   G  PDV SYN L+  L   GK +E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++   M      P   T++I++  LC++   + A+ + + +++ G  P+  +Y+ LI 
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ GRL  A   L+ +   G  P+ + Y T++    +N K    LEI   +   G + 
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+ +A    G    A   + +M+++G+  D ++YN++I+  C+EG ++ A+ LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M    F     T+ I++ G CKA  I+ A   LE M   G   N   Y  +++ +G  
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556

Query: 371 G 371
           G
Sbjct: 557 G 557



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 4/279 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +       + E+ E ++         P+VVTY++LI   C+    +    +L  M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD  +Y+ LIA   R   L  +++ L+ M+  G  PD+ +YN+++  L + GK D+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  +     +P ++++N M + L  +     AL M   +  +G  P+ +TYN +I 
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G +  A  +L ++      P+ +TY  ++    +  + +  + +L +M   G   
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
           +   Y  +I      G   EA     ++  D V++D +S
Sbjct: 542 NETTYTVLIEGIGFAGYRAEAM----ELANDLVRIDAIS 576



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 35/203 (17%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG- 72
           +  FC+  RL+ A   +   I  G LPD+V YN ++   C+    D    I  ++ E G 
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434

Query: 73  ----------------------------------ISPDVVTYNSLIAGATRNSLLSCSLD 98
                                             I PD +TYNS+I+   R  ++  + +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M      P V +YN ++    +  + ++A  V + M+     P   T+ +++ G+ 
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554

Query: 159 KNRYTDNALRMFRGLQKHGFVPE 181
              Y   A+ +   L +   + E
Sbjct: 555 FAGYRAEAMELANDLVRIDAISE 577


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 236/448 (52%), Gaps = 12/448 (2%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +I  CT      CK  +  KA  ++      G +PDV+TYN+LI  YC+     +   +L
Sbjct: 144 DIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLL 203

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +RM    +SPDVVTYN+++     +  L  ++++LD  ++    PDV +Y  L+    + 
Sbjct: 204 DRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKE 260

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
               +A ++  +M      P   T+N+++NG+CK    D A+R    +  +G  P ++T+
Sbjct: 261 SGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITH 320

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NI+++ +C  GR   A   L E+   G +P+ +T+  ++    R       +++L  M +
Sbjct: 321 NIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ 380

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G T +   Y  ++ A  K  +++ A +Y++ MV+ G   DIV+YNTL+   CK+GK++ 
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 440

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +L+++  +G      T+  +IDGL K G    A   L+ M   G   ++  Y+ +V 
Sbjct: 441 AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVG 500

Query: 366 RLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L ++GK+D AI  F   E M VK ++ TY+S++  LCKA++   A   L   +  G + 
Sbjct: 501 GLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKP 560

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +++   +++GL + G  +EA ++ +++
Sbjct: 561 TETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 9/301 (2%)

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N+ +  L + G+ +E  +  +DM+C    P       ++ GLCK   T  A R+   L+ 
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G VP+++TYN+LI G CK G + +A  +L  +  S   P+ +TY TI++    + K K 
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKE 230

Query: 236 GLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
            +E+L   M+R+ Y  D   Y  +I A  K   + +A   +++M   G + D+V+YN LI
Sbjct: 231 AMEVLDRQMQRECYP-DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 289

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CKEG+L+ A   L+ M   G + +  TH I++  +C  G    A   L  M + G  
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            ++  +N +++ L + G I  AI+V E M       +S +Y+ ++H LCK K++  A + 
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409

Query: 411 L 411
           L
Sbjct: 410 L 410



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 184/377 (48%), Gaps = 7/377 (1%)

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V  N+ +    RN  L      L++M+  G  PD+ +  SL+  L + GK  +A RV + 
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +      P   T+N++++G CK     +AL++   L +    P++VTYN +++ LC +G+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGK 227

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L+ A  +L         P+ ITYT +++   +       +++L  M+ KG   D   Y  
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K GRL EA  ++  M + G Q +++++N ++   C  G+   A   L EM ++G
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
                 T  ILI+ LC+ G I  A   LE M + G   N  +YN ++  L KD K++ AI
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
              + M  +    D  TY++++  LCK  ++  A ++L      G   +      V+DGL
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 434 RHSGCRREAKKIQSKIR 450
              G   +A K+  +++
Sbjct: 468 SKVGKTDDAIKLLDEMK 484



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 1/244 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++E+A   +   +  G  PD+VTYN L+ A C+    D    ILN++   G SP 
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++TYN++I G ++      ++ LLDEM   G+ PD+ +Y++L+  L + GK DEA   F 
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D+    + P   T+N ++ GLCK R T  A+     +   G  P   +Y ILI+GL   G
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL-SAMKRKGYTFDGFGY 255
             + A  +L EL   G    +     ++K  F    +   L +L + +      F G G+
Sbjct: 577 LAKEALELLNELCSRGVVKKSSAEQVVVKIPFNVFYFYFLLHLLFNGLGSHREIFVGVGF 636

Query: 256 CTVI 259
             ++
Sbjct: 637 FMIL 640


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 226/440 (51%), Gaps = 14/440 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             + +   C+  RL++A +++   +R G  PD VTYN+ ID  C+    D  + +L +M 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P  VTY +L+ G  +   L  ++ +L++M+E G  P + +Y  ++  L + G+ +
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR--GLQKH--GFVPELVTY 185
           EA R+F DM+     P    +  ++ GLCK+   + A  +++    +KH    VP++VTY
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 186 NILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
             LI GLCKAGR+  AR +   E  + G  P+A+TYT+I+    +  + + G E    M+
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +GY  D   Y  +I  F+K   + +A     QM+  G  +  V+YN +++  CK G++ 
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            AY     ME++G      T++ L+DG C  GN+  A      M   G + NL +YN I+
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 369

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS---KLLLSCLKS 417
             L + GK+  A   FE +  +    D +T+++ +H LC  +RL + S   +L  S +  
Sbjct: 370 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC--QRLDTVSDGVELFESMVSQ 427

Query: 418 GVRILKSAQKAVVDGLRHSG 437
           G      +   ++DG+  +G
Sbjct: 428 GTSPNLHSYSILMDGICRAG 447



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 191/401 (47%), Gaps = 9/401 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN----RMREAGIS 74
           KA R+E+A  I +D +  G  PD   Y  LI   C+    +  Y +      R   A   
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 75  PDVVTYNSLIAGATR-NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           PDVVTY SLI G  +   +L       DE +E G  PD  +Y S++  L +LG+ +E   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F +M      P   T+  +++G  K +    A R++R + + G V   VTYNI++ GLC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAGR+  A      + + G     +TY+ +M            +E+   M  +G   +  
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE-GKLEAAYLLLDE 312
            Y  +I    + G+L +A  Y E+++   +  D+ ++N  ++  C+    +     L + 
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M  QG   + ++++IL+DG+C+AG ++ A      M   G   ++  +N ++  L   G+
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483

Query: 373 IDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKL 410
           +D A+ VF  +E     D+++Y S++  L + +R+  A  L
Sbjct: 484 VDEALEVFRELERRSAPDAWSYWSLLDGLSRCERMEEARLL 524



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 3/329 (0%)

Query: 17  FCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CKA R+ +A  +  D  +  G +PD VTY  +ID  C+    + G    + MR  G  P
Sbjct: 196 LCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 255

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D VTY +LI G  +  ++  +  +  +ML+ G      +YN ++  L + G+  EA   F
Sbjct: 256 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 315

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M          T++ +++G C       A+ +FR +   G  P LV+YNI+I+GLC+A
Sbjct: 316 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 375

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           G+L  A +  ++L      P+  T+   +   C R      G+E+  +M  +G + +   
Sbjct: 376 GKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHS 435

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++    + G L+ A +   +MV+ GV  D+V +NTLI   C  G+++ A  +  E+E
Sbjct: 436 YSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARL 343
           ++    D +++  L+DGL +   ++ ARL
Sbjct: 496 RRSAP-DAWSYWSLLDGLSRCERMEEARL 523



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 149/308 (48%), Gaps = 9/308 (2%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           +P    F +++NGLC+ +  D A  +     + G  P+ VTYN+ I GLCKA R+  A  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +LK++ +    P  +TYT ++    +  +    + +L  M  KG +     Y  VI    
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--- 320
           K GR++EA      M+ +G + D   Y  LI   CK GK E AY L  E   +       
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 321 -DKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
            D  T+T LIDGLCKAG I  AR +  +   + GF  +   Y  I+D L K G+++    
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
            F  M  +    D+ TY++++    KAK +P A ++    L+SG  +       ++DGL 
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 435 HSGCRREA 442
            +G   EA
Sbjct: 304 KAGRVAEA 311



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 174/373 (46%), Gaps = 9/373 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPD+V +  +I G  R   L  +  +L+  +  G  PD  +YN  +  L +  + D+A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + + M      P T T+  +++GL K    D A+ +   + + G  P L TY ++I GL 
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK----YKLGLEILSAMKRKGYT 249
           KAGR+  AR I  ++  +G  P+A  YT ++K   ++ K    Y L  E  +        
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 250 FDGFGYCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            D   Y ++I    K GR+ EA   + ++ V  G   D V+Y ++I+  CK G++E    
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
              EM  +G+E D  T+  LIDG  KA  I  A      M + G   +   YN I+D L 
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K G++  A   F +ME    V    TYS+++   C    + +A +L    L  G      
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 425 AQKAVVDGLRHSG 437
           +   ++ GL  +G
Sbjct: 364 SYNIIIRGLCRAG 376



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 162/341 (47%), Gaps = 9/341 (2%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           M   PD+ ++  +++ L +  + DEA  V +  +     P   T+N+ ++GLCK    D+
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A ++ + + +   +P  VTY  L+ GL KAGRL  A  +L+++ + G++P   TYT ++ 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +  + +    I   M   G   D F Y  +I    K G+ +EA    ++        
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 286 ----DIVSYNTLINLYCKEGK-LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
               D+V+Y +LI+  CK G+ LEA  +  DE  ++GF  D  T+T +IDGLCK G ++ 
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
                  M   G++ +   Y  ++D   K   I  A  V+  M     V  + TY+ ++ 
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            LCKA R+  A    L+  + G         A++DG    G
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 341



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 124/221 (56%), Gaps = 2/221 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +ST   NI +   CKA R+ +A A  +     G +  VVTY+ L+D +C   +  A   +
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             RM + G  P++V+YN +I G  R   L+ +    +++L+  + PDV+++N+ +H L Q
Sbjct: 350 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409

Query: 125 -LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            L    +   +F+ M+    +P   +++I+++G+C+    + AL +FR +   G  P++V
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVV 469

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            +N LI+ LC AGR+  A  + +EL +   AP+A +Y +++
Sbjct: 470 VFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLL 509



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 4/129 (3%)

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D    T++I+GLC+   +  A   LE   + G + +   YN  +D L K  ++D A  + 
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 381 ESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           + M+ K     + TY+++V  L KA RL  A  +L   ++ G          V+DGL  +
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 437 GCRREAKKI 445
           G   EA++I
Sbjct: 126 GRVEEARRI 134


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN LI+ +C+    D    +L+RMR    SPD VTYN +I        L  +L +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD++L     P V +Y  L+      G  DEA ++  +M+   L P   T+N ++ G+CK
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A  M R L+  G  P++++YNIL++ L   G+      ++ ++      PN +T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R+ K +  + +L  MK KG T D + Y  +IAAF + GRL  A +++E M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           +DG   DIV+YNT++   CK GK + A  +  ++ + G   +  ++  +   L  +G+ I
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSM 394
           +   + LE ++  G D +   YN ++  L ++G +D A  +   M   E   S  TY+ +
Sbjct: 452 RALHMILEMVSN-GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAK 453
           +   CKA R+  A  +L S + +G R  ++    +++G+  +G R EA ++ +  +R+  
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINA 570

Query: 454 ISH 456
           IS 
Sbjct: 571 ISE 573



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 179/361 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   +L+ A  ++   +     P V+TY +LI+A       D    +L+ M  
Sbjct: 193 NIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLS 252

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+ TYN++I G  +  ++  + +++  +   G  PDV SYN L+  L   GK +E
Sbjct: 253 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEE 312

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++   M      P   T++I++  LC++   + A+ + + +++ G  P+  +Y+ LI 
Sbjct: 313 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 372

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ GRL  A   L+ +   G  P+ + Y T++    +N K    LEI   +   G + 
Sbjct: 373 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 432

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+ +A    G    A   + +MV++G+  D ++YN++I+  C+EG ++ A+ LL
Sbjct: 433 NSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELL 492

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M    F     T+ I++ G CKA  I+ A   L+ M   G   N   Y  +++ +G  
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFA 552

Query: 371 G 371
           G
Sbjct: 553 G 553



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 35/203 (17%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG- 72
           +  FC+  RL+ A   +   I  G LPD+V YN ++   C+    D    I  ++ E G 
Sbjct: 371 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 430

Query: 73  ----------------------------------ISPDVVTYNSLIAGATRNSLLSCSLD 98
                                             I PD +TYNS+I+   R  ++  + +
Sbjct: 431 SPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFE 490

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M      P V +YN ++    +  + ++A  V   M+     P   T+ +++ G+ 
Sbjct: 491 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIG 550

Query: 159 KNRYTDNALRMFRGLQKHGFVPE 181
              Y   A+ +   L +   + E
Sbjct: 551 FAGYRAEAMELANDLVRINAISE 573


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 221/429 (51%), Gaps = 39/429 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R + A  ++      GV  DV TYNMLI   C+      GY +L  MR+
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I P+ VTYN+LI G +    +  +  LL+EML  G+ P+  ++N+L+      G   E
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA----LRMFR--------------- 171
           A ++F  M    LTP   ++ ++L+GLCKN   D A    +RM R               
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 172 GLQKHGFV----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL K+GF+                P++VTY+ LI G CK GR +TA+ I+  +   G +P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I Y+T++  C R    K  + I  AM  +G+T D F +  ++ +  K G++ EA ++M
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M +DG+  + VS++ LIN Y   G+   A+ + DEM K G     +T+  L+ GLCK 
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G+++ A   L+ ++ +    +   YN ++  + K G +  A+++F  M     + DS+TY
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691

Query: 392 SSMVHNLCK 400
           +S++  LC+
Sbjct: 692 TSLISGLCR 700



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 198/408 (48%), Gaps = 4/408 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C     EK+  ++    + G  P +VTYN ++  YC+   F A   +L+ M+
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  DV TYN LI    R++ ++    LL +M +  I P+  +YN+L++     GK  
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A+++  +M+   L+P   TFN +++G         AL+MF  ++  G  P  V+Y +L+
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK      AR     +  +G     ITYT ++    +N      + +L+ M + G  
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  F K+GR K A + + ++   G+  + + Y+TLI   C+ G L+ A  +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + M  +G   D +T  +L+  LCKAG +  A   +  M   G   N  +++C+++  G 
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            G+   A +VF+ M         FTY S++  LCK   L  A K L S
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 15/469 (3%)

Query: 1   MFGKLST--RLLNICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDA 51
           +FG L T  RL N     +    R+   E +I D + +       G  P V T N ++ +
Sbjct: 148 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 207

Query: 52  YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             +     + ++ L  M +  I PDV T+N LI           S  L+ +M + G  P 
Sbjct: 208 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 267

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           + +YN+++H   + G+   A  +   M    +     T+N++++ LC++        + R
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++K    P  VTYN LI G    G++  A  +L E+   G +PN +T+  ++       
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            +K  L++   M+ KG T     Y  ++    K      A  +  +M  +GV +  ++Y 
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            +I+  CK G L+ A +LL+EM K G + D  T++ LI+G CK G  K A+  +  + ++
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
           G   N   Y+ ++    + G +  AI ++E+M      +D FT++ +V +LCKA ++  A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
            + +      G+     +   +++G  +SG   +A  +  +  M K+ H
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 614



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 5/408 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK    + A    +   R GV    +TY  +ID  C+    D    +LN M + GI PD
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY++LI G  +      + +++  +  +G+ P+   Y++L++   ++G   EA R+++
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI    T    TFN+++  LCK      A    R +   G +P  V+++ LI G   +G
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +  E+   GH P   TY +++K   +    +   + L ++       D   Y 
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++ A  K G L +A     +MV   +  D  +Y +LI+  C++GK   A L   E E +
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717

Query: 317 G-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           G    +K  +T  +DG+ KAG  K      E M+ +G   ++   N ++D   + GKI+ 
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             ++   M  ++      TY+ ++H   K K + ++  L  S + +G+
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 197/445 (44%), Gaps = 27/445 (6%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            + T + N  +   CK+  L KA ++  + ++  +LPD  TY  LI   C+      G T+
Sbjct: 651  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTV 705

Query: 65   LNRM--REA----GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
            +  +  +EA     + P+ V Y   + G  +       +   ++M  +G  PD+ + N++
Sbjct: 706  IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765

Query: 119  MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
            +    ++GK ++ N +  +M   +  P   T+NI+L+G  K +    +  ++R +  +G 
Sbjct: 766  IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825

Query: 179  VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            +P+ +T + L+ G+C++  L     ILK     G   +  T+  ++  C  N +     +
Sbjct: 826  LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885

Query: 239  ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            ++  M   G + D      +++   +  R +E+   + +M   G+  +   Y  LIN  C
Sbjct: 886  LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945

Query: 299  KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            + G ++ A+++ +EM            + ++  L K G    A L L +M K+     + 
Sbjct: 946  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 1005

Query: 359  AYNCIVDRLGKDGKIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSAS 408
            ++  ++    K+G      NV E++E++          D  +Y+ ++  LC    +  A 
Sbjct: 1006 SFTTLMHLCCKNG------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1059

Query: 409  KLLLSCLKSGVRILKSAQKAVVDGL 433
            +L       G     +  KA++ GL
Sbjct: 1060 ELYEEMKGDGFLANATTYKALIRGL 1084


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 217/435 (49%), Gaps = 13/435 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-- 72
            CK  R+++A  +I +  R    VLP+++TYN  +D  C+         ++  +R+    
Sbjct: 296 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 355

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           +SPD VT+++LI G  +   +  +  + D+M+  G  P+V +YN+L++ L +  K + A+
Sbjct: 356 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 415

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            + + M+   +TP   T++++++  CK    D AL +  G+   G  P +VT+N +I GL
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 475

Query: 193 CKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           CK+ R   A  +  ++    G  P+ ITY T++   FR  +      +L AM       D
Sbjct: 476 CKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDP----D 531

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            + +   I    K+G +  A     +M+   +  D V++N LI   CK G  E A  L +
Sbjct: 532 TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 591

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM  +  + D  T   LIDGLCKAG ++ AR  L+ M  +G   N+  YN +V  L K G
Sbjct: 592 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           +I+ A    E M     V DS TY S+V+ LC+A R   A +L+      G         
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711

Query: 428 AVVDGLRHSGCRREA 442
            +VDGL  SG   +A
Sbjct: 712 ILVDGLWKSGQTEQA 726



 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 136/445 (30%), Positives = 220/445 (49%), Gaps = 14/445 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI + + C+A    +A  I    + R GV P +VTYN +I+  C+     AG  +   + 
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PDVVTYN+LI    +   L  +  L  +M      P+V +Y+ L++ L ++G+ D
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303

Query: 130 EANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTY 185
           EA  + Q+M     D+ P   T+N  L+GLCK   T  A  + R L+       P+ VT+
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 363

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + LI GLCK G++  A  +  ++   G+ PN ITY  ++    +  K +    ++ +M  
Sbjct: 364 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 423

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG T D   Y  ++ AF K  R+ EA + +  M + G   ++V++N++I+  CK  +   
Sbjct: 424 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE 483

Query: 306 AYLLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           A+ + D+M  K G   DK T+  LIDGL + G    A   L+ M     D +  A+NC +
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCI 539

Query: 365 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L K G +  A+ V+  M     V D  T++ ++   CKA     AS L    +   ++
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
                  A++DGL  +G    A+ I
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDI 624



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 225/447 (50%), Gaps = 11/447 (2%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N C+    K   + +A  +    + L ++PD VT+N+LI   C+  +F+    +  
Sbjct: 532 TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 591

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M    + PDV+T+ +LI G  +   +  + D+LD M  +G+PP+V +YN+L+H L + G
Sbjct: 592 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + +EA +  ++M+     P + T+  ++  LC+   TD+AL++   L+  G+ P+ VTYN
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI---LSAM 243
           IL+ GL K+G+   A  +L+E+   GH P+ +TY T++    +    +    +   +S+ 
Sbjct: 712 ILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINLYCKEG 301
             +    +   Y  +I    K+GR+ EA + +++M+     V  +I++YN+ ++  CK+ 
Sbjct: 772 VSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQS 831

Query: 302 KLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            +  A  L+  +         D  T + LIDGLCK G    A    + M   G+  N+  
Sbjct: 832 MMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVT 891

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++ L K  K++ A  + ESM  K    D  TYS +V   CKA  +  A +LL    
Sbjct: 892 YNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREA 442
             G         +++DGL  S    EA
Sbjct: 952 SRGCTPNVVTFNSIIDGLCKSDQSGEA 978



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 214/449 (47%), Gaps = 47/449 (10%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             NI +   CKA   E+A A+  + +   + PDV+T+  LID  C+    +A   IL+ M 
Sbjct: 570  FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              G+ P+VVTYN+L+ G  ++  +  +   L+EM+  G  PD  +Y SL++ L +  + D
Sbjct: 630  NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            +A ++  ++      P T T+NI+++GL K+  T+ A+ +   +   G  P++VTYN LI
Sbjct: 690  DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 190  KGLCKAGRLRTARWILKELGDSGH---APNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
              LCKAG L  AR +  ++         PN +TY+ ++    +  +     E++  M RK
Sbjct: 750  DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 247  G-------YTFDGF--GYC------------------------------TVIAAFVKIGR 267
                     T++ F  G C                              T+I    K G+
Sbjct: 810  SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 268  LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
              EA +  + M+  G   ++V+YN L+N  CK  K+E A+ +++ M  +G   D  T+++
Sbjct: 870  TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 328  LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
            L+D  CKA ++  A   L  M   G   N+  +N I+D L K  +   A  +F+ M +K 
Sbjct: 930  LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989

Query: 387  ----DSFTYSSMVHNLCKAKRLPSASKLL 411
                D  TY +++  L +      A  LL
Sbjct: 990  GLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 232/486 (47%), Gaps = 78/486 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC----------------- 53
           N  V   CKA+++E+A A+I   +  GV PDV+TY++L+DA+C                 
Sbjct: 399 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 458

Query: 54  -----QFVSFDA---GYTILNRMREA-----------GISPDVVTYNSLIAGATR----- 89
                  V+F++   G    +R  EA           G+ PD +TY +LI G  R     
Sbjct: 459 RGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAG 518

Query: 90  ---------------------NSL-----LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
                                N L     +S +L + + MLE+ + PD  ++N L+    
Sbjct: 519 QAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGAC 578

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  ++A+ +F++M+  +L P   TF  +++GLCK    + A  +   +   G  P +V
Sbjct: 579 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 638

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN L+ GLCK+GR+  A   L+E+  SG  P++ITY +++    R  +    L+++S +
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  G+  D   Y  ++    K G+ ++A   +E+MV  G   D+V+YNTLI+  CK G L
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758

Query: 304 EAAYLLLDEMEKQGFEC---DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLE 358
           E A  L  +M  +   C   +  T+++LI+GLCK G I  AR  ++ M +   D   N+ 
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
            YN  +D L K   +  A  +  S+         D+ T+S+++  LCK  +   A  +  
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878

Query: 413 SCLKSG 418
             +  G
Sbjct: 879 DMIAGG 884



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 220/471 (46%), Gaps = 48/471 (10%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N  V   CK+ R+E+A   + + +  G +PD +TY  L+ A C+    D    +++ ++ 
Sbjct: 641  NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 700

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G  PD VTYN L+ G  ++     ++ +L+EM+  G  PDV +YN+L+  L + G  +E
Sbjct: 701  FGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEE 760

Query: 131  ANRVFQDM---------------------ICG-------------------DLTPCTATF 150
            A R+  DM                     +C                    D+ P   T+
Sbjct: 761  ARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITY 820

Query: 151  NIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWILKEL 208
            N  L+GLCK      A  + R L+       P+ VT++ LI GLCK G+   A  +  ++
Sbjct: 821  NSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM 880

Query: 209  GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
               G+ PN +TY  +M    +  K +    ++ +M  KG T D   Y  ++ AF K   +
Sbjct: 881  IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHV 940

Query: 269  KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQGFECDKYTHTI 327
             EA + +  M + G   ++V++N++I+  CK  +   A+ + D+M  K G   DK T+  
Sbjct: 941  DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCT 1000

Query: 328  LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VK 386
            LIDGL + G    A + L+ M     D +  A+NC ++ L K G +  A++    +E V 
Sbjct: 1001 LIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSRALHRMLELELVP 1056

Query: 387  DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            D  T++ ++   CKA     AS L    +   ++       A++DGL  +G
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 1107



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 186/378 (49%), Gaps = 15/378 (3%)

Query: 11   NICVCTFCKANRLEKAEAIIID---GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            N  + + CKA  LE+A  +  D    +    +P+VVTY++LI+  C+    D    ++  
Sbjct: 746  NTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805

Query: 68   M--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE--MGIPPDVWSYNSLMHCLF 123
            M  +   + P+++TYNS + G  + S+++ + +L+  + +  + + PD  ++++L+  L 
Sbjct: 806  MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 865

Query: 124  QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + G+ DEA  VF DMI G   P   T+N+++NGLCK    + A  M   +   G  P+++
Sbjct: 866  KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925

Query: 184  TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            TY++L+   CKA  +  A  +L  +   G  PN +T+ +I+    ++ +     ++   M
Sbjct: 926  TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985

Query: 244  KRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
              K G   D   YCT+I    + G   +A   ++ M       D  ++N  IN   K G 
Sbjct: 986  TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP----DTYAFNCCINGLSKLGD 1041

Query: 303  LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            +  A   + E+E      DK T  ILI G CKAGN + A    E M       ++  +  
Sbjct: 1042 VSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 1098

Query: 363  IVDRLGKDGKIDHAINVF 380
            ++D L K G+++   ++ 
Sbjct: 1099 LIDGLCKAGQVEATWDIM 1116



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 164/374 (43%), Gaps = 43/374 (11%)

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-------------------------- 145
           ++S+N  ++ L + G P +A  +F+  +     P                          
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170

Query: 146 --------CTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAG 196
                     A +NI+L  LC+   T  AL +FRG + + G  P +VTYN +I GLCK+ 
Sbjct: 171 RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 230

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L     + +EL + GH P+ +TY T++    +    +    +   M  +    +   Y 
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            +I    K+GR+ EA + +++M      V  +I++YN+ ++  CK+     A  L+  + 
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 350

Query: 315 KQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
                   D  T + LIDGLCK G I  A    + M   G+  N+  YN +V+ L K  K
Sbjct: 351 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 410

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           ++ A  + ESM  K    D  TYS +V   CKA R+  A +LL      G         +
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 470

Query: 429 VVDGLRHSGCRREA 442
           ++DGL  S    EA
Sbjct: 471 IIDGLCKSDRSGEA 484


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 221/429 (51%), Gaps = 39/429 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R + A  ++      GV  DV TYNMLI   C+      GY +L  MR+
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I P+ VTYN+LI G +    +  +  LL+EML  G+ P+  ++N+L+      G   E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA----LRMFR--------------- 171
           A ++F  M    LTP   ++ ++L+GLCKN   D A    +RM R               
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 172 GLQKHGFV----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL K+GF+                P++VTY+ LI G CK GR +TA+ I+  +   G +P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I Y+T++  C R    K  + I  AM  +G+T D F +  ++ +  K G++ EA ++M
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M +DG+  + VS++ LIN Y   G+   A+ + DEM K G     +T+  L+ GLCK 
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G+++ A   L+ ++ +    +   YN ++  + K G +  A+++F  M     + DS+TY
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 392 SSMVHNLCK 400
           +S++  LC+
Sbjct: 652 TSLISGLCR 660



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 198/408 (48%), Gaps = 4/408 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C     EK+  ++    + G  P +VTYN ++  YC+   F A   +L+ M+
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  DV TYN LI    R++ ++    LL +M +  I P+  +YN+L++     GK  
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A+++  +M+   L+P   TFN +++G         AL+MF  ++  G  P  V+Y +L+
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK      AR     +  +G     ITYT ++    +N      + +L+ M + G  
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  F K+GR K A + + ++   G+  + + Y+TLI   C+ G L+ A  +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + M  +G   D +T  +L+  LCKAG +  A   +  M   G   N  +++C+++  G 
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            G+   A +VF+ M         FTY S++  LCK   L  A K L S
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 15/469 (3%)

Query: 1   MFGKLST--RLLNICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDA 51
           +FG L T  RL N     +    R+   E +I D + +       G  P V T N ++ +
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167

Query: 52  YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             +     + ++ L  M +  I PDV T+N LI           S  L+ +M + G  P 
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           + +YN+++H   + G+   A  +   M    +     T+N++++ LC++        + R
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++K    P  VTYN LI G    G++  A  +L E+   G +PN +T+  ++       
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            +K  L++   M+ KG T     Y  ++    K      A  +  +M  +GV +  ++Y 
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            +I+  CK G L+ A +LL+EM K G + D  T++ LI+G CK G  K A+  +  + ++
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
           G   N   Y+ ++    + G +  AI ++E+M      +D FT++ +V +LCKA ++  A
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
            + +      G+     +   +++G  +SG   +A  +  +  M K+ H
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 574



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 5/408 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK    + A    +   R GV    +TY  +ID  C+    D    +LN M + GI PD
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY++LI G  +      + +++  +  +G+ P+   Y++L++   ++G   EA R+++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI    T    TFN+++  LCK      A    R +   G +P  V+++ LI G   +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +  E+   GH P   TY +++K   +    +   + L ++       D   Y 
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++ A  K G L +A     +MV   +  D  +Y +LI+  C++GK   A L   E E +
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677

Query: 317 G-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           G    +K  +T  +DG+ KAG  K      E M+ +G   ++   N ++D   + GKI+ 
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             ++   M  ++      TY+ ++H   K K + ++  L  S + +G+
Sbjct: 738 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 197/445 (44%), Gaps = 27/445 (6%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            + T + N  +   CK+  L KA ++  + ++  +LPD  TY  LI   C+      G T+
Sbjct: 611  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTV 665

Query: 65   LNRM--REA----GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
            +  +  +EA     + P+ V Y   + G  +       +   ++M  +G  PD+ + N++
Sbjct: 666  IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 119  MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
            +    ++GK ++ N +  +M   +  P   T+NI+L+G  K +    +  ++R +  +G 
Sbjct: 726  IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 179  VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            +P+ +T + L+ G+C++  L     ILK     G   +  T+  ++  C  N +     +
Sbjct: 786  LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 239  ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            ++  M   G + D      +++   +  R +E+   + +M   G+  +   Y  LIN  C
Sbjct: 846  LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 299  KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            + G ++ A+++ +EM            + ++  L K G    A L L +M K+     + 
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 359  AYNCIVDRLGKDGKIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSAS 408
            ++  ++    K+G      NV E++E++          D  +Y+ ++  LC    +  A 
Sbjct: 966  SFTTLMHLCCKNG------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1019

Query: 409  KLLLSCLKSGVRILKSAQKAVVDGL 433
            +L       G     +  KA++ GL
Sbjct: 1020 ELYEEMKGDGFLANATTYKALIRGL 1044


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 221/429 (51%), Gaps = 39/429 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R + A  ++      GV  DV TYNMLI   C+      GY +L  MR+
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I P+ VTYN+LI G +    +  +  LL+EML  G+ P+  ++N+L+      G   E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA----LRMFR--------------- 171
           A ++F  M    LTP   ++ ++L+GLCKN   D A    +RM R               
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 172 GLQKHGFV----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL K+GF+                P++VTY+ LI G CK GR +TA+ I+  +   G +P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I Y+T++  C R    K  + I  AM  +G+T D F +  ++ +  K G++ EA ++M
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M +DG+  + VS++ LIN Y   G+   A+ + DEM K G     +T+  L+ GLCK 
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G+++ A   L+ ++ +    +   YN ++  + K G +  A+++F  M     + DS+TY
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 392 SSMVHNLCK 400
           +S++  LC+
Sbjct: 652 TSLISGLCR 660



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 198/408 (48%), Gaps = 4/408 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C     EK+  ++    + G  P +VTYN ++  YC+   F A   +L+ M+
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  DV TYN LI    R++ ++    LL +M +  I P+  +YN+L++     GK  
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A+++  +M+   L+P   TFN +++G         AL+MF  ++  G  P  V+Y +L+
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK      AR     +  +G     ITYT ++    +N      + +L+ M + G  
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  F K+GR K A + + ++   G+  + + Y+TLI   C+ G L+ A  +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + M  +G   D +T  +L+  LCKAG +  A   +  M   G   N  +++C+++  G 
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            G+   A +VF+ M         FTY S++  LCK   L  A K L S
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 15/469 (3%)

Query: 1   MFGKLST--RLLNICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDA 51
           +FG L T  RL N     +    R+   E +I D + +       G  P V T N ++ +
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167

Query: 52  YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             +     + ++ L  M +  I PDV T+N LI           S  L+ +M + G  P 
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           + +YN+++H   + G+   A  +   M    +     T+N++++ LC++        + R
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++K    P  VTYN LI G    G++  A  +L E+   G +PN +T+  ++       
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            +K  L++   M+ KG T     Y  ++    K      A  +  +M  +GV +  ++Y 
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            +I+  CK G L+ A +LL+EM K G + D  T++ LI+G CK G  K A+  +  + ++
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
           G   N   Y+ ++    + G +  AI ++E+M      +D FT++ +V +LCKA ++  A
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
            + +      G+     +   +++G  +SG   +A  +  +  M K+ H
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 574



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 5/408 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK    + A    +   R GV    +TY  +ID  C+    D    +LN M + GI PD
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY++LI G  +      + +++  +  +G+ P+   Y++L++   ++G   EA R+++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI    T    TFN+++  LCK      A    R +   G +P  V+++ LI G   +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +  E+   GH P   TY +++K   +    +   + L ++       D   Y 
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++ A  K G L +A     +MV   +  D  +Y +LI+  C++GK   A L   E E +
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677

Query: 317 G-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           G    +K  +T  +DG+ KAG  K      E M+ +G   ++   N ++D   + GKI+ 
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             ++   M  ++      TY+ ++H   K K + ++  L  S + +G+
Sbjct: 738 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/445 (21%), Positives = 197/445 (44%), Gaps = 27/445 (6%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            + T + N  +   CK+  L KA ++  + ++  +LPD  TY  LI   C+      G T+
Sbjct: 611  VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTV 665

Query: 65   LNRM--REA----GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
            +  +  +EA     + P+ V Y   + G  +       +   ++M  +G  PD+ + N++
Sbjct: 666  IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 119  MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
            +    ++GK ++ N +  +M   +  P   T+NI+L+G  K +    +  ++R +  +G 
Sbjct: 726  IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 179  VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            +P+ +T + L+ G+C++  L     ILK     G   +  T+  ++  C  N +     +
Sbjct: 786  LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 239  ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            ++  M   G + D      +++   +  R +E+   + +M   G+  +   Y  LIN  C
Sbjct: 846  LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 299  KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            + G ++ A+++ +EM            + ++  L K G    A L L +M K+     + 
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965

Query: 359  AYNCIVDRLGKDGKIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSAS 408
            ++  ++    K+G      NV E++E++          D  +Y+ ++  LC    +  A 
Sbjct: 966  SFTTLMHLCCKNG------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1019

Query: 409  KLLLSCLKSGVRILKSAQKAVVDGL 433
            +L       G     +  KA++ GL
Sbjct: 1020 ELYEEMKGDGFLANATTYKALIRGL 1044


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 228/443 (51%), Gaps = 25/443 (5%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAG 61
           L +I +   CKA R        ID +R        G++ D V Y  L+    +    D  
Sbjct: 46  LCSILIDGLCKAKR-------SIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQA 98

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             IL+ MR+ G  P+VVTYNSLI G  +N+    + +L + M  +   P + +YN+L+  
Sbjct: 99  LAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDG 158

Query: 122 LFQLGKPDEANRVFQDMI---CGDL----TPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           LF+ GK + A  +FQ+M+     D+    +P   T++++++GLCK      A+ +   ++
Sbjct: 159 LFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK 218

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G  P+++TY IL+ GLCK  ++  A  +L+E+ D+G  PN +TY +++    R R+  
Sbjct: 219 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS 278

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L ++  M  +G T +   Y T+I    K+GR+K+A   +  M+  G   D++ YN LI
Sbjct: 279 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 338

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CK  +++ +  LL      G + D  T++ +I GLC++  +  A   L Y+   G  
Sbjct: 339 NGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP 398

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            ++  Y+ ++D L K GK+D A +++E M       D  TYS+++  LCKA R+  A  L
Sbjct: 399 PDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLL 458

Query: 411 LLSCLKSGVRILKSAQKAVVDGL 433
           L   ++ G         +++ GL
Sbjct: 459 LARMVRMGTPPSTMTYNSLIKGL 481



 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 211/406 (51%), Gaps = 9/406 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V+TY++LID  C+         +L  M+  G SPDV+TY  L+ G  + S ++ + ++
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L EML+ G  P++ +YNSL+H L +  +  +A  + +DM C   TP   T+  +++GLCK
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                +A  M   +   G  P+L+ YN+LI GLCKA ++  +  +L+     G  P+ +T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y++++    R+ +      +L  +K +G   D   Y T+I    K G++ EA D  E M 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            DG   D+V+Y+TLI+  CK G+++ A+LLL  M + G      T+  LI GLC   ++ 
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---------DSFT 390
            A   +E M +     +   YN ++  + +  ++D A+ + E  + +         D+  
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           YSS++  LCKA R+  A       + +GV         +++GL+ S
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 222/475 (46%), Gaps = 51/475 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  RL++A AI+ +    G  P+VVTYN LID  C+    D    +   M+    SP +V
Sbjct: 91  KEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV 150

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEM-------------------------------- 106
           TYN+L+ G  R   L  ++ L  EML+                                 
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210

Query: 107 ----------GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                     G  PDV +Y  L+  L +  K   A  V ++M+     P   T+N +L+G
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+ R   +AL + R +   G  P +VTY  LI GLCK GR++ A  +L ++ D G  P+
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y  ++    +  +    + +L      G   D   Y +VI    +  RL EA   + 
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 390

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            + + G   D++ Y+TLI+  CK GK++ A+ L + M   G + D  T++ LIDGLCKAG
Sbjct: 391 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +  A L L  M ++G   +   YN ++  L     +D AI + E ME       + TY+
Sbjct: 451 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN 510

Query: 393 SMVHNLCKAKRLPSASKLL----LSCLKSGVRILKS-AQKAVVDGLRHSGCRREA 442
            ++H +C+ +R+ SA  LL      C+ +G   L + A  +++DGL  +G   EA
Sbjct: 511 ILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEA 565



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 207/405 (51%), Gaps = 9/405 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANR+ +A  ++      G  PDV+TY +L+D  C+     A + +L  M +AG  P+
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYNSL+ G  R   +S +L L+ +M   G  P+V +Y +L+  L ++G+  +A  +  
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DMI    TP    +N+++NGLCK    D ++ + R     G  P++VTY+ +I GLC++ 
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  +L  +   G  P+ I Y+T++    +  K     ++   M   G   D   Y 
Sbjct: 381 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYS 440

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K GR+ EA   + +MV  G     ++YN+LI   C    L+ A  L++EME+ 
Sbjct: 441 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 500

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEY-----MNKIGFDSNLEAYNCIVDRLGKDG 371
                  T+ ILI G+C+   +  A + LE      +   G   +  AY+ ++D L K G
Sbjct: 501 NCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAG 560

Query: 372 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           ++  A++ F+ M     + D  TYS ++  L K+K L     L+L
Sbjct: 561 RVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVL 605



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 202/414 (48%), Gaps = 11/414 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV TY  L+  +C+    D      + MR   + P+V   + LI G  +      +L  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M   GI  D   Y +L+  L++  + D+A  +  +M      P   T+N +++GLCK
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGH----- 213
           N   D A  +F  ++     P +VTYN L+ GL + G+L  A  + +E+ D   H     
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            +PN ITY+ ++    +  +    +E+L +MK +G + D   Y  ++    K  ++  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           + + +M+  G   ++V+YN+L++  C+  ++  A  L+ +M  +G   +  T+  LIDGL
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DS 388
           CK G +K A   L  M   G   +L  YN +++ L K  ++D +I +     S  +K D 
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            TYSS+++ LC++ RL  A +LLL     G          ++DGL  +G   EA
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 180/383 (46%), Gaps = 11/383 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDV TY +L+ G  R   +  +    DEM    + P+V+  + L+  L +  +  +A R
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M    +   T  +  +L+GL K +  D AL +   ++ HG  P +VTYN LI GLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDG 252
           K      A+ + + +     +P+ +TY T++   FR  K +  + +   M  R+ +  D 
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 253 ------FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                   Y  +I    K  R+ +A + +E M   G   D+++Y  L++  CKE K+ AA
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + +L EM   G   +  T+  L+ GLC+A  +  A   +  M   G   N+  Y  ++D 
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K G++  A  +   M  K    D   Y+ +++ LCKA ++  +  LL   +  G++  
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 423 KSAQKAVVDGLRHSGCRREAKKI 445
                +V+ GL  S    EA ++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRL 388



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 154/339 (45%), Gaps = 68/339 (20%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A A++ D I  G  PD++ YNMLI+  C+    D    +L R    GI PD
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+S+I G  R++ L  +  LL  +   G PPDV  Y++L+  L + GK DEA  +++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 137 DMICGD------------------------------------LTPCTATFNIMLNGLCKN 160
            M  GD                                      P T T+N ++ GLC  
Sbjct: 426 VM-AGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 484

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            + D A+ +   +++    P  VTYNILI G+C+  R+ +A  +L++             
Sbjct: 485 NHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ------------- 531

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
                   + R    G          G   D   Y ++I    K GR+ EA DY ++M+ 
Sbjct: 532 -------AKARCVAAG----------GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMID 574

Query: 281 DGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGF 318
           +GV  D ++Y+ L+    K   L E  +L+LD+M + G+
Sbjct: 575 NGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 613



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   C  N L++A  ++ +  R    P  VTYN+LI   C+    D+   +L
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLL 529

Query: 66  NRMR-----EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            + +       G + D + Y+SLI G  +   ++ +LD   EM++ G+ PD  +Y+ L+ 
Sbjct: 530 EQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLE 589

Query: 121 CL 122
            L
Sbjct: 590 GL 591


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 218/406 (53%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   ++++A  +  + +R G  P+V++YN +I+  C+  +      +  +M 
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKME 220

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDVVTYN++I    ++ L++ +++ L EML+ GIPP+V++YN ++H    LG+ +
Sbjct: 221 QNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLN 280

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA R+F++M+  D+ P T T  I+++GLCK      A  +F  + + G  P + TYN L+
Sbjct: 281 EATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALM 340

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A+ + + +   G AP   +Y  ++    ++R+      +L+ M  K   
Sbjct: 341 DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN 400

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T++    + GR KEA +  ++M + G+  ++V+Y+ L++ +CK G L+ A  L
Sbjct: 401 PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL 460

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M+++  E +   HTILI+G+  AG ++ A+     +   G    +  Y  ++  L K
Sbjct: 461 LKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +G  D A ++F  ME    + +S +Y+ M+    + +   +A +L+
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 566



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 195/419 (46%), Gaps = 4/419 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV  +V + N+LI+  C+    D   +IL +M + GI P   T+N+LI G      +  
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +++L +EM+  G  P+V SYN++++ L + G    A  VF+ M      P   T+N +++
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R  ++A+     +   G  P + TYN ++ G C  G+L  A  + KE+      P
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T T ++    +         +   M  KG   +   Y  ++  +     + EA    
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E M+  G    + SYN LIN +CK  +++ A  LL EM  +    D  T++ L+ GLC+ 
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G  K A    + M   G   NL  Y+ ++D   K G +D A+ + +SM+ K    +   +
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  +  A +L  A +L       G+R        ++ GL   G   EA  +  K+ 
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 194/395 (49%), Gaps = 4/395 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ +   C+ N ++ A +I+    +LG+ P   T+N LI+  C          + N M 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+V++YN++I G  +    S ++D+  +M + G  PDV +YN+++  L +    +
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A     +M+   + P   T+N M++G C     + A R+F+ +     +P+ VT  IL+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G +  AR + + + + G  PN  TY  +M      R      ++   M R+G  
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  +I  F K  R+ EA   + +M    +  D V+Y+TL+   C+ G+ + A  +
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM   G   +  T++IL+DG CK G++  A   L+ M +   + N+  +  +++ +  
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFI 485

Query: 370 DGKIDHAINVFESM---EVKDSF-TYSSMVHNLCK 400
            GK++ A  +F  +    ++ +  TY+ M+  L K
Sbjct: 486 AGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 189/403 (46%), Gaps = 4/403 (0%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +S D       RM      P V  +   +    +    S  + L ++M   G+  +V+S 
Sbjct: 67  ISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSL 126

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++CL +L   D A  +   M    + P  +TFN ++NGLC       A+ +F  + +
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G  P +++YN +I GLCK G    A  + K++  +G  P+ +TY TI+    ++R    
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            +E LS M  +G   + F Y  ++  F  +G+L EAT   ++MV   V  D V+   L++
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CKEG +  A L+ + M ++G E +  T+  L+DG C    +  A+   E M + G   
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP 366

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            + +YN +++   K  ++D A ++   M  K    D+ TYS+++  LC+  R   A  + 
Sbjct: 367 GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIF 426

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                 G+         ++DG    G   EA K+   ++  K+
Sbjct: 427 KEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 4/367 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK   +  A   + + +  G+ P+V TYN ++  +C     +    +   M  
Sbjct: 232 NTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVG 291

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
             + PD VT   L+ G  +  ++S +  + + M E G+ P++ +YN+LM  +CL +L   
Sbjct: 292 RDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM-- 349

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA +VF+ MI     P   ++NI++NG CK+R  D A  +   +      P+ VTY+ L
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           ++GLC+ GR + A  I KE+   G  PN +TY+ ++    ++      L++L +M+ K  
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   +  +I      G+L+ A +   ++  DG++  I +Y  +I    KEG  + AY 
Sbjct: 470 EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  +ME  GF  +  ++ ++I G  +  +   A   ++ M    F +NL  +  ++D   
Sbjct: 530 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLES 589

Query: 369 KDGKIDH 375
           +D  I  
Sbjct: 590 QDEIISQ 596



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 203/420 (48%), Gaps = 4/420 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R+   P V  +   + ++ +   +    ++ N+M   G++ +V + N LI    R + +
Sbjct: 80  VRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHV 139

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++ +L +M ++GI P   ++N+L++ L   GK  EA  +F +M+     P   ++N +
Sbjct: 140 DFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTI 199

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NGLCK   T  A+ +F+ ++++G  P++VTYN +I  LCK   +  A   L E+ D G 
Sbjct: 200 INGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI 259

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN  TY  ++       +      +   M  +    D      ++    K G + EA  
Sbjct: 260 PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARL 319

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E M   GV+ +I +YN L++ YC +  +  A  + + M +QG     +++ ILI+G C
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC 379

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
           K+  +  A+  L  M     + +   Y+ ++  L + G+   A+N+F+ M     + +  
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TYS ++   CK   L  A KLL S  +  +         +++G+  +G    AK++ SK+
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKL 499



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 35/324 (10%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T  L I V   CK   + +A  +       GV P++ TYN L+D YC     +    +  
Sbjct: 298 TVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFE 357

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G +P V +YN LI G  ++  +  +  LL EM    + PD  +Y++LM  L Q G
Sbjct: 358 IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P EA  +F++M    L P   T++I+L+G CK+ + D AL++ + +Q+    P +V + 
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI+G+  AG+L  A+ +  +L   G  P   TYT ++K                     
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIK--------------------- 516

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                           +K G   EA D   +M  DG   +  SYN +I  + +      A
Sbjct: 517 --------------GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTA 562

Query: 307 YLLLDEMEKQGFECDKYTHTILID 330
             L+DEM  + F  +  T  +L+D
Sbjct: 563 IRLIDEMVGKRFSANLSTFQMLLD 586


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 221/474 (46%), Gaps = 42/474 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI + + C+A    +A  I    + R GV P +VTYN +I+  C+     AG  +   + 
Sbjct: 49  NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDVVTYN+LI    +   L  +  L   M   G  P+V +Y+ L++ L ++G+ D
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168

Query: 130 EANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ------------- 174
           EA  + Q+M     D+ P   T+N  L+GLCK   T  A  + R L+             
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 228

Query: 175 ----------------------KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
                                   G+VP +VTYN L+ GLCKA ++  A  +++ + D G
Sbjct: 229 STLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG 288

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ITY+ ++    +  +    LE+L  M  +G T +   + ++I    K  R  EA 
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 348

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               Q+    +  D V++N LI   CK G  E A  L +EM  +  + D  T   LIDGL
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
           CKAG ++ AR  L+ M  +G   N+  YN +V  L K G+I+      E M     V +S
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPES 468

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            TY S+V+ LC+A R   A +L+      G          +VDGL  SG   +A
Sbjct: 469 MTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQA 522



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 169/324 (52%), Gaps = 2/324 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  + +  EA   D I  G +P+VVTYN L++  C+    +  + ++  M + G++PD
Sbjct: 235 LCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPD 292

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY+ L+    + S +  +L+LL  M   G  P+V ++NS++  L +  +  EA ++  
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIAL 352

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    L P   TFNI++ G CK    + A  +F  +      P+++T+  LI GLCKAG
Sbjct: 353 QVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG 412

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  AR IL  +G+ G  PN +TY  ++    ++ + +   E L  M   G   +   Y 
Sbjct: 413 QVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYG 472

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +++ A  +  R  +A   + ++ + G   D V+YN L++   K GK E A  +L+EM  +
Sbjct: 473 SLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 532

Query: 317 GFECDKYTHTILIDGLCKAGNIKG 340
           G + D +T      GL ++GN+ G
Sbjct: 533 GHQPDSFTFAACFGGLHRSGNLAG 556



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 169/320 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CKA+++E+A A+I   +  GV PDV+TY++L+DA+C+    D    +L+ M  
Sbjct: 262 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 321

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+VVT+NS+I G  ++     +  +  ++    + PD  ++N L+    + G  ++
Sbjct: 322 RGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQ 381

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F++M+  ++ P   TF  +++GLCK    + A  +   +   G  P +VTYN+L+ 
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+GR+      L+E+  SG  P ++TY +++    R  +    L+++S +K  G+  
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDP 501

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  ++    K G+ ++A   +E+MV  G Q D  ++        + G L     LL
Sbjct: 502 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELL 561

Query: 311 DEMEKQGFECDKYTHTILID 330
             +  +G   D  T + ++D
Sbjct: 562 RVVLAKGMLPDATTCSSILD 581



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 181/364 (49%), Gaps = 6/364 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           L V PD VT++ LID  C+    D      + M   G  P+VVTYN+L+ G  +   +  
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMER 276

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  +++ M++ G+ PDV +Y+ L+    +  + DEA  +   M     TP   TFN +++
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK+  +  A ++   +     VP+ VT+NILI G CKAG    A  + +E+      P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+  ++    +  + +   +IL  M   G   +   Y  ++    K GR++E  +++
Sbjct: 397 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFL 456

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+MV+ G   + ++Y +L+   C+  + + A  L+ +++  G++ D  T+ IL+DGL K+
Sbjct: 457 EEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKS 516

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G  + A   LE M   G   +   +      L + G +   + +   +  K    D+ T 
Sbjct: 517 GKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTC 576

Query: 392 SSMV 395
           SS++
Sbjct: 577 SSIL 580



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 190/413 (46%), Gaps = 46/413 (11%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           V  YN+++ + C+         I    M   G++P +VTYN++I G  +++ L   ++L 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+++ G  PDV                                    T+N +++ LCK 
Sbjct: 105 EELVKRGHHPDV-----------------------------------VTYNTLIDSLCKA 129

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG--HAPNAI 218
              + A R+  G+   G VP +VTY++LI GLCK GR+  AR +++E+        PN I
Sbjct: 130 GDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 189

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKG--YTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           TY + +    +        E++ +++      + D   + T+I    K G+  EA +  +
Sbjct: 190 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--D 247

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G   ++V+YN L+N  CK  K+E A+ +++ M  +G   D  T+++L+D  CKA 
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH----AINVFESMEVKDSFTYS 392
            +  A   L  M   G   N+  +N I+D L K  +       A+ V+  M V D  T++
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            ++   CKA     AS L    +   ++       A++DGL  +G    A+ I
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDI 420


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 223/443 (50%), Gaps = 4/443 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + T CK  RL  A  +++D    G+LP+  TYN+L+  YC+         ++  M +
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TYN LI G      +  +  L DEM  + + PDV SYN+L++   +  K  E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M    + P   T NIM+   CK    D+A      +++ GF P+ VTYN LI 
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAG +  A   + E+G      +++T  TI++   R +K +   ++LS+ +++GY  
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  + K G +  A    ++M    +    V+YN +I   C+ GK E A   L
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ + G   D+ T+  ++ G C+ G+++ A      M +  F  ++   N ++  L  +
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G ++ A+ +F +   K    D+ TY++++ +LCK  RL  A  LL    +  +       
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++  L  SG  REA++  SK+
Sbjct: 667 NAIITALTDSGRIREAEEFMSKM 689



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 200/373 (53%), Gaps = 4/373 (1%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I+LG++P+V T+N++I  YC    F      LN M +   SPD VTYN+++    +  
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKG 257

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  + DLL +M   G+ P+  +YN L++   ++G   EA  V + M   +L P   T+N
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +++NGLC     + A ++   ++    +P++V+YN LI G  +  ++  A  +L+E+ + 
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  PNA+T+  ++K   +  K       ++ M+  G++ D   Y T+I  + K G + EA
Sbjct: 378 GVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              M++M    +++D V+ NT++   C+E KLE AY LL    K+G+  D+ ++  LI G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKD 387
             K GN+  A    + M +     +   YNCI+  L + GK + AI+    + ES  + D
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 388 SFTYSSMVHNLCK 400
             TY++++H  C+
Sbjct: 558 ETTYNTILHGYCR 570



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 206/470 (43%), Gaps = 45/470 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   R+E+A  +  +   L +LPDVV+YN LI+   ++      + +L  M E
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSE 376

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VT+N ++    +   +  + + + +M E G  PD  +YN+L++   + G   E
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGE 436

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------ 178
           A R   +M   ++   + T N +L  LC+ +  + A ++    +K G+            
Sbjct: 437 AFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIV 496

Query: 179 -----------------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                  +P  VTYN +I GLC+ G+   A   L EL +SG  P
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY TI+    R    +   +  + M    +  D F    ++      G L++A    
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLF 616

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
              V+ G  +D V+YNTLI   CKEG+L+ A+ LL EME++    D YT+  +I  L  +
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
           G I+ A    E+M+K+     LE  N     L  D       +         S  YS  +
Sbjct: 677 GRIREAE---EFMSKM-----LEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWI 728

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAK 443
             LC   +   A ++     + G+ + KS    ++DGL  R     +EA+
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 184/389 (47%), Gaps = 9/389 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE--- 130
           SP     ++ I    ++     +  +  +M  + + P++ + N+L++ L +         
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +   F D I   + P   TFNI++ G C +N++ D A+     + K+   P+ VTYN ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKD-AVEFLNVMGKYNCSPDNVTYNTIL 250

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GRL  AR +L ++   G  PN  TY  ++    +    K    ++  M +    
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  +I      GR++EA    ++M    +  D+VSYNTLIN   +  K+  A+ L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+EM ++G + +  TH I++   CK G +  A   +  M + GF  +   YN +++   K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A    + M  K    DS T ++++  LC+ K+L  A KLL S  K G  I + +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              ++ G    G    A K+  +++  +I
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEI 519



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 12/331 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+ +  LN  + T C+  +LE+A  ++    + G   D V+Y  LI  Y +  + D    
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M+E  I P  VTYN +I G  +      ++  L+E+LE G+ PD  +YN+++H   
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  ++A +    M+     P   T NI+L GLC     + AL++F      G   + V
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI  LCK GRL  A  +L E+ +    P+  TY  I+     + + +   E +S M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D            ++ +L +    +    ++      V+Y+  I   C EGK 
Sbjct: 690 LEKGNLPD------------QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKY 737

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + A  +  E +++G   DK T+  L+DGL K
Sbjct: 738 KDAMRIFGESKQKGITVDKSTYINLMDGLIK 768


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 225/446 (50%), Gaps = 1/446 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK+  L++A  ++ D +  G +PD VTY  LI+  C     +    + N  + 
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+V YNSL+ G  R  L+  +L +++EM+E G  PD+W+YN +++ L ++G   +
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V  D I     P   TFN +++G CK    D+AL++   +  +G  P+++TYN ++ 
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG+ +      +E+   G  PNAITY  +++   +  + +    ++  M + G   
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVP 558

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I  F + G L  A    +++   G      ++N LI  Y  +  ++ A  + 
Sbjct: 559 DAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIF 618

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G++ D YT+ IL+DGLCKA N+  A  HL  M   GF  ++  +  +++ L  +
Sbjct: 619 GEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMN 678

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            ++  A+ +   M V+       +   L   K+  +A K+L+  L     I   A + + 
Sbjct: 679 HRVSEAVAIIHIM-VRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYRAYEVLH 737

Query: 431 DGLRHSGCRREAKKIQSKIRMAKISH 456
           +G+R +   R+A+K  + I      H
Sbjct: 738 EGVRDNKLTRKARKADASIMFVSQHH 763



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 204/414 (49%), Gaps = 9/414 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           NI +   C+  RLE+A A++    R+G  V PDVVTYN L+   C+          L RM
Sbjct: 250 NIWIRGLCEDGRLEEAVALVE---RMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G  PD  TYN++I G  ++ +L  + +LL + +  G  PD  +Y SL++ L   G  
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  +F +    DL P    +N ++ GLC+     +AL++   + + G  P++ TYNI+
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK G +  A  ++ +    G+ P+  T+ T++    +  K    L+++  M   G 
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y +V+    K G+ KE  +  E+M+  G + + ++YN LI  +CK  +LE A  
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 546

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           ++  M + G   D  +   LI G C+ G++ GA L  + +++ G+ +  + +N ++    
Sbjct: 547 VIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 606

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
               +  A  +F  M  K    D +TY  +V  LCKA  +  A   L   +  G
Sbjct: 607 SKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 197/409 (48%), Gaps = 5/409 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    YN ++DA       D  + +  RM  AG++PD  T+   +           +L L
Sbjct: 104 PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL 163

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  + E G      +Y +++  L+  G    A  +F +M+  D+ P  ATFN +L+ LC+
Sbjct: 164 LRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQ 223

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 +  +   + K G      T NI I+GLC+ GRL  A  +++ +G +  AP+ +T
Sbjct: 224 KGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAPDVVT 282

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T+M+   ++ K +   + L  M  +G   D F Y T+I  + K G L+EAT+ ++  V
Sbjct: 283 YNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAV 342

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D V+Y +LIN  C EG +E A  L +E + +  + D   +  L+ GLC+ G I 
Sbjct: 343 FKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 402

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A   +  M + G   ++  YN I++ L K G I  A  V     VK    D FT+++++
Sbjct: 403 HALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
              CK  +L SA +L+      G+        +V++GL  +G  +E  +
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 198/401 (49%), Gaps = 5/401 (1%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           ++A  + +  +  GV PD  T+ + + ++C          +L  + E G       Y ++
Sbjct: 123 DQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTV 182

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           + G   +     +  L DEML   + PDV ++N+++H L Q G   E+  +   ++   +
Sbjct: 183 VRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGM 242

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           +    T NI + GLC++   + A+ +   +  +   P++VTYN L++GLCK  +++ A  
Sbjct: 243 SANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQ 301

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
            L  + + G  P+  TY TI+    ++   +   E+L     KG+  D   YC++I    
Sbjct: 302 YLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLC 361

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
             G ++ A +   +     ++ D+V YN+L+   C++G +  A  +++EM ++G   D +
Sbjct: 362 AEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIW 421

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+ I+I+GLCK GNI  A + +      G+  ++  +N ++D   K  K+D A+ + E M
Sbjct: 422 TYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 481

Query: 384 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
                  D  TY+S+++ LCKA +    ++     +  G R
Sbjct: 482 WTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 5/374 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PDV T+N ++ A CQ         +L ++ + G+S +  T N  I G   +  L  ++
Sbjct: 207 VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L++ M    + PDV +YN+LM  L +  K  EA +    M+     P   T+N +++G 
Sbjct: 267 ALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+     A  + +     GFVP+ VTY  LI GLC  G +  A  +  E       P+ 
Sbjct: 326 CKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDL 385

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           + Y +++K   R       L++++ M  +G   D + Y  +I    K+G + +A   M  
Sbjct: 386 VVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND 445

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
            +  G   D+ ++NTLI+ YCK  KL++A  L++ M   G   D  T+  +++GLCKAG 
Sbjct: 446 AIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGK 505

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSS 393
            K      E M   G   N   YN +++   K  +++ A  V   M     V D+ ++++
Sbjct: 506 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNT 565

Query: 394 MVHNLCKAKRLPSA 407
           ++H  C+   L  A
Sbjct: 566 LIHGFCRNGDLDGA 579



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 7/273 (2%)

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+  F  +      P    YN ++  L  A     A  +   +  +G AP+A T+T  +K
Sbjct: 90  AVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLK 149

Query: 226 C-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C   R + + L +L ++  +G       YCTV+      G    A    ++M+   V 
Sbjct: 150 SFCLTGRPH-VALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF 208

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D+ ++N +++  C++G +  +  LL ++ K+G   +K+T  I I GLC+ G ++ A   
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
           +E M       ++  YN ++  L KD K+  A      M     + D FTY++++   CK
Sbjct: 269 VERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +  L  A++LL   +  G    +    ++++GL
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 222/443 (50%), Gaps = 4/443 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  RL  A  +++D    G+LP+  TYN+L+  YC+         ++  M +
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TYN LI G      +  +  L DEM  + + PDV SYN+L++   +  K  E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M    + P   T NIM+   CK    D+A      +++ GF P+ VTYN LI 
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAG +  A   + E+G      +++T  TI++   R +K +   ++LS+ +++GY  
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI 486

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  + K G +  A    ++M    +    V+YN +I   C+ GK E A   L
Sbjct: 487 DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKL 546

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ + G   D+ T+  ++ G C+ G+++ A      M +  F  ++   N ++  L  +
Sbjct: 547 NELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G ++ A+ +F +   K    D+ TY++++ +LCK  RL  A  LL    +  +       
Sbjct: 607 GMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++  L  SG  REA++  SK+
Sbjct: 667 NAIITALTDSGRIREAEEFMSKM 689



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 200/373 (53%), Gaps = 4/373 (1%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I+LG++P+V T+N++I  YC    F      LN M +   SPD VTYN+++    +  
Sbjct: 198 DAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKG 257

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  + DLL +M   G+ P+  +YN L++   ++G   EA  V + M   +L P   T+N
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +++NGLC     + A ++   ++    +P++V+YN LI G  +  ++  A  +L+E+ + 
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  PNA+T+  ++K   +  K       ++ M+  G++ D   Y T+I  + K G + EA
Sbjct: 378 GVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              M++M    +++D V+ NT++   C+E KLE AY LL    K+G+  D+ ++  LI G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKD 387
             K GN+  A    + M +     +   YNCI+  L + GK + AI+    + ES  + D
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 388 SFTYSSMVHNLCK 400
             TY++++H  C+
Sbjct: 558 ETTYNTILHGYCR 570



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 205/470 (43%), Gaps = 45/470 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   R+E+A  +  +   L +LPDVV+YN LI+   ++      + +L  M E
Sbjct: 317 NMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSE 376

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VT+N ++    +   +  + + + +M E G  PD  +YN+L++   + G   E
Sbjct: 377 KGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGE 436

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------ 178
           A R   +M   ++   + T N +L  LC+ +  + A ++    +K G+            
Sbjct: 437 AFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIV 496

Query: 179 -----------------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                  +P  VTYN +I GLC+ G+   A   L EL +SG  P
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY TI+    R    +   +  + M    +  D F    ++      G L++A    
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
              V+ G  +D V+YNTLI   CKEG+L+ A+ LL EME++    D YT+  +I  L  +
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
           G I+ A    E+M+K+     LE        L  D       +         S  YS  +
Sbjct: 677 GRIREAE---EFMSKM-----LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWI 728

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAK 443
             LC   +   A ++     + G+ + KS    ++DGL  R     +EA+
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 184/389 (47%), Gaps = 9/389 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE--- 130
           SP     ++ I    ++     +  +  +M  + + P++ + N+L++ L +         
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +   F D I   + P   TFNI++ G C +N++ D A+     + K+   P+ VTYN ++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKD-AVEFLNVMGKYNCSPDNVTYNTIL 250

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GRL  AR +L ++   G  PN  TY  ++    +    K    ++  M +    
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  +I      GR++EA    ++M    +  D+VSYNTLIN   +  K+  A+ L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+EM ++G + +  TH I++   CK G +  A   +  M + GF  +   YN +++   K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A    + M  K    DS T ++++  LC+ K+L  A KLL S  K G  I + +
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              ++ G    G    A K+  +++  +I
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEI 519



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 58/354 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+ +  LN  + T C+  +LE+A  ++    + G   D V+Y  LI  Y +  + D    
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M+E  I P  VTYN +I G  +      ++  L+E+LE G+ PD  +YN+++H   
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  ++A +    M+     P   T NI+L GLC     + AL++F      G   + V
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI  LCK GRL  A  +L E+ +    P+  TY  I                    
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI-------------------- 669

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG------VQLD----------- 286
                          I A    GR++EA ++M +M+  G      +QLD           
Sbjct: 670 ---------------ITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETS 714

Query: 287 ------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                  V+Y+  I   C EGK + A  +  E +++G   DK T+  L+DGL K
Sbjct: 715 EESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 224/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD +TYN  ++  CQ         +++ M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN ++    +N  L  +  +L++M++ G  PD+ ++N+L+  L    + +
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    ++P   TFNI++N LCK      ALR+F  ++  G  P+ VTYN LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +LK++  +G   + ITY TI+    +  + +   E+   M  +G +
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I    K  ++ +A + + QM+++G+Q + ++YN+++  YCK+G ++ A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   GFE D  T+  LI+GLCKAG  + A   L  M   G     +AYN ++  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
              I  A+++F  M    E  D+ TY  +   LC+    +  A   +L  +  G     S
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 674 SFRMLAEGLLNLG 686



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 227/456 (49%), Gaps = 5/456 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG +  T + N  +    + ++++  E++  +    G+ PDVVT+N L+ A C+     
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +L  M   G++PD  T+ +L+ G      +  +L +   MLEMG      + N L+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +LG+ ++A    Q  I     P   T+N  +NGLC+N +  +AL++   + + G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNI++  LCK G+L  A+ IL ++ D G  P+  T+ T++       + +  L++
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              +  KG + D + +  +I A  K+G    A    E+M   G   D V+YNTLI+  C 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GKL  A  LL +ME  G      T+  +IDGLCK   I+ A    + M+  G   N   
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +N ++D L KD KID A  +   M  +    ++ TY+S++ + CK   +  A+ +L +  
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            +G  +       +++GL  +G  + A K+   +R+
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   +E A  +    + +G     VT N+LI+ YC+    +     + +    G  PD
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN+ + G  +N  +  +L ++D M++ G  PDV++YN +++CL + G+ +EA  +  
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   TFN ++  LC     + AL + R +   G  P++ T+NILI  LCK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  + +E+ +SG  P+ +TY T++       K    L++L  M+  G       Y 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K  R++EA +  +QM   G+  + +++NTLI+  CK+ K++ A+ L+++M  +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T+  ++   CK G+IK A   LE M   GF+ ++  Y  +++ L K G+   A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + V   M +K        Y+ ++ +L +   +  A  L     + G        K V  G
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645

Query: 433 L-RHSGCRREA 442
           L R  G  +EA
Sbjct: 646 LCRGGGPIKEA 656



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 195/430 (45%), Gaps = 49/430 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNS 91
           ++LGV+      +  +D+Y  Q +  DA   ILN+++   GI  D V YN L+      S
Sbjct: 107 VKLGVV------HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGS 160

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +     +  EM   GI PDV ++N+LM  L +  +   A  + ++M    + P   TF 
Sbjct: 161 KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 220

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGD 210
            ++ G  +    + ALR+   + + G     VT N+LI G CK GR+  A  +I +E+ D
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ ITY T +    +N      L+++  M ++G+  D F Y  V+    K G+L+E
Sbjct: 281 -GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + QMV  G   DI ++NTLI   C   +LE A  L  ++  +G   D YT  ILI+
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            LCK G+      HL                              A+ +FE M+      
Sbjct: 400 ALCKVGDP-----HL------------------------------ALRLFEEMKNSGCTP 424

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  TY++++ NLC   +L  A  LL     +G          ++DGL       EA+++ 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 447 SKIRMAKISH 456
            ++ +  IS 
Sbjct: 485 DQMDLQGISR 494



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 1/216 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+  + +T+N LID  C+    D  + ++
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N+M   G+ P+ +TYNS++    +   +  + D+L+ M   G   DV +Y +L++ L + 
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A +V + M    + P    +N +L  L +     +AL +FR + + G  P+ +TY
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAPNAITY 220
            I+ +GLC+  G ++ A   + E+ D G  P   ++
Sbjct: 640 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 42/308 (13%)

Query: 153 MLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L  L +    D ALRM    L +  F P    Y  +I+ L   G L   + ++ E+   
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 212 GH-------------------------------------APNAITYTTIMKCCFRNRKYK 234
           GH                                       + + Y  ++       K K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           L   + S M  +G   D   + T++ A  +  +++ A   +E+M + GV  D  ++ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             + +EG +EAA  +   M + G    K T  +LI+G CK G ++ A  +++     GF+
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            +   YN  V+ L ++  + HA+ V + M       D FTY+ +V+ LCK  +L  A  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 411 LLSCLKSG 418
           L   +  G
Sbjct: 344 LNQMVDRG 351


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 225/444 (50%), Gaps = 4/444 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L +A A+ +    +G  PDVVTYN LID Y +    +    +++ MR
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++G + DVVTYN+LI   ++   +  +     EM   G+  +V ++++ +    + G   
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F  M    + P   T+  +++G CK    D+A+ +   +   G VP +VTY +++
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G++  A  +L  +   G   N + YTT++   F N   +  L++L+ MK KG  
Sbjct: 383 DGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGME 442

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K  ++ EA   + +M   G++ + V Y T+++   K GK   A  L
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L ++   GF+ +  T+  LIDGLCKAG+I  A  H   M ++G D N++AY  ++D   K
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCK 562

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G ++ A+++   M  K    D   Y+S++    K   L  A  L    ++SG+++    
Sbjct: 563 IGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYC 622

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
               + G  +    +EA+ + S++
Sbjct: 623 YTCFISGFCNMNMMQEARGVLSEM 646



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 185/409 (45%), Gaps = 35/409 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  R+EKA +   +  R GV+ +VVT++  +DA+C+         +  +MR 
Sbjct: 274 NALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRV 333

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY SL+ G  +   L  ++ LLDEM+  G+ P+V +Y  ++  L + GK  E
Sbjct: 334 RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAE 393

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG---------------------------------- 156
           A+ V   M  G +      +  +++G                                  
Sbjct: 394 ADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIW 453

Query: 157 -LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK++  D A  +   +   G  P  V Y  ++  L KAG+   A  +L ++ DSG  P
Sbjct: 454 GLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQP 513

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  ++    +       +   + M+  G   +   Y  +I  F KIG L +A   M
Sbjct: 514 NVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM 573

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G+ LD V Y +LI+ Y K+  L+ A+ L  +M + G + D Y +T  I G C  
Sbjct: 574 NEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNM 633

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
             ++ AR  L  M   G   +   YNC++ +  K G ++ A ++   ME
Sbjct: 634 NMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 192/417 (46%), Gaps = 49/417 (11%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN-- 132
           P VV  ++L++    + LL  ++  L  + ++ +PP+  + N   H L +L +  +    
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCN---HILLRLARNRQGGLV 188

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R   D++     P   TFNI+++ LCK      A  +F  ++  G  P++VTYN LI G 
Sbjct: 189 RRLFDLLP---VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 245

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            K G L     ++ E+  SG A + +TY  ++ C  +  + +        MKR+G   + 
Sbjct: 246 GKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANV 305

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             + T + AF K G ++EA     QM   G+  +  +Y +L++  CK G+L+ A +LLDE
Sbjct: 306 VTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGAR---------------------LHLEYMNK- 350
           M  QG   +  T+T+++DGLCK G +  A                      +H  +MN  
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425

Query: 351 -------------IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 393
                         G + ++  Y  ++  L KD K+D A ++   M       ++  Y++
Sbjct: 426 SERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTT 485

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++  L KA +   A  LL   L SG +       A++DGL  +G   EA    +K+R
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 115/234 (49%), Gaps = 7/234 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   L    +   CK  ++++A++++      G+ P+ V Y  ++DA  +         
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+++ ++G  P+VVTY +LI G  +   +S ++   ++M E+G+ P+V +Y +L+    
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G  ++A  +  +MI   ++     +  +++G  K     +A  +   + + G   +L 
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLY 621

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY-KLG 236
            Y   I G C    ++ AR +L E+  +G  P+   Y  ++      RKY KLG
Sbjct: 622 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI------RKYQKLG 669


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 224/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD +TYN  ++  CQ         +++ M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN ++    +N  L  +  +L++M++ G  PD+ ++N+L+  L    + +
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    ++P   TFNI++N LCK      ALR+F  ++  G  P+ VTYN LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +LK++  +G   + ITY TI+    +  + +   E+   M  +G +
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I    K  ++ +A + + QM+++G+Q + ++YN+++  YCK+G ++ A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   GFE D  T+  LI+GLCKAG  + A   L  M   G     +AYN ++  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
              I  A+++F  M    E  D+ TY  +   LC+    +  A   +L  +  G     S
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 674 SFRMLAEGLLNLG 686



 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 227/456 (49%), Gaps = 5/456 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG +  T + N  +    + ++++  E++  +    G+ PDVVT+N L+ A C+     
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +L  M   G++PD  T+ +L+ G      +  +L +   MLEMG      + N L+
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +LG+ ++A    Q  I     P   T+N  +NGLC+N +  +AL++   + + G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNI++  LCK G+L  A+ IL ++ D G  P+  T+ T++       + +  L++
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              +  KG + D + +  +I A  K+G    A    E+M   G   D V+YNTLI+  C 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GKL  A  LL +ME  G      T+  +IDGLCK   I+ A    + M+  G   N   
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +N ++D L KD KID A  +   M  +    ++ TY+S++ + CK   +  A+ +L +  
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            +G  +       +++GL  +G  + A K+   +R+
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594



 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   +E A  +    + +G     VT N+LI+ YC+    +     + +    G  PD
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN+ + G  +N  +  +L ++D M++ G  PDV++YN +++CL + G+ +EA  +  
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   TFN ++  LC     + AL + R +   G  P++ T+NILI  LCK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  + +E+ +SG  P+ +TY T++       K    L++L  M+  G       Y 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K  R++EA +  +QM   G+  + +++NTLI+  CK+ K++ A+ L+++M  +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 525

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T+  ++   CK G+IK A   LE M   GF+ ++  Y  +++ L K G+   A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + V   M +K        Y+ ++ +L +   +  A  L     + G        K V  G
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645

Query: 433 L-RHSGCRREA 442
           L R  G  +EA
Sbjct: 646 LCRGGGPIKEA 656



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 195/430 (45%), Gaps = 49/430 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNS 91
           ++LGV+      +  +D+Y  Q +  DA   ILN+++   GI  D V YN L+      S
Sbjct: 107 VKLGVV------HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGS 160

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +     +  EM   GI PDV ++N+LM  L +  +   A  + ++M    + P   TF 
Sbjct: 161 KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFT 220

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGD 210
            ++ G  +    + ALR+   + + G     VT N+LI G CK GR+  A  +I +E+ D
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ ITY T +    +N      L+++  M ++G+  D F Y  V+    K G+L+E
Sbjct: 281 -GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + QMV  G   DI ++NTLI   C   +LE A  L  ++  +G   D YT  ILI+
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            LCK G+      HL                              A+ +FE M+      
Sbjct: 400 ALCKVGDP-----HL------------------------------ALRLFEEMKNSGCTP 424

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  TY++++ NLC   +L  A  LL     +G          ++DGL       EA+++ 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 447 SKIRMAKISH 456
            ++ +  IS 
Sbjct: 485 DQMDLQGISR 494



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 1/216 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+  + +T+N LID  C+    D  + ++
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N+M   G+ P+ +TYNS++    +   +  + D+L+ M   G   DV +Y +L++ L + 
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A +V + M    + P    +N +L  L +     +AL +FR + + G  P+ +TY
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAPNAITY 220
            I+ +GLC+  G ++ A   + E+ D G  P   ++
Sbjct: 640 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 42/308 (13%)

Query: 153 MLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L  L +    D ALRM    L +  F P    Y  +I+ L   G L   + ++ E+   
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 212 GH-------------------------------------APNAITYTTIMKCCFRNRKYK 234
           GH                                       + + Y  ++       K K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           L   + S M  +G   D   + T++ A  +  +++ A   +E+M + GV  D  ++ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             + +EG +EAA  +   M + G    K T  +LI+G CK G ++ A  +++     GF+
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            +   YN  V+ L ++  + HA+ V + M       D FTY+ +V+ LCK  +L  A  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 411 LLSCLKSG 418
           L   +  G
Sbjct: 344 LNQMVDRG 351


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 224/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD +TYN  ++  CQ         +++ M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN ++    +N  L  +  +L++M++ G  PD+ ++N+L+  L    + +
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    ++P   TFNI++N LCK      ALR+F  ++  G  P+ VTYN LI
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +LK++  +G   + ITY TI+    +  + +   E+   M  +G +
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I    K  ++ +A + + QM+++G+Q + ++YN+++  YCK+G ++ A  +
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   GFE D  T+  LI+GLCKAG  + A   L  M   G     +AYN ++  L +
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 521

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
              I  A+++F  M    E  D+ TY  +   LC+    +  A   +L  +  G     S
Sbjct: 522 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 581

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 582 SFRMLAEGLLNLG 594



 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 224/447 (50%), Gaps = 8/447 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LLN+ V    + ++++  E++  +    G+ PDVVT+N L+ A C+         +L  M
Sbjct: 60  LLNVLV----EGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++PD  T+ +L+ G      +  +L +   MLEMG      + N L++   +LG+ 
Sbjct: 116 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 175

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A    Q  I     P   T+N  +NGLC+N +  +AL++   + + G  P++ TYNI+
Sbjct: 176 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 235

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LCK G+L  A+ IL ++ D G  P+  T+ T++       + +  L++   +  KG 
Sbjct: 236 VNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 295

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D + +  +I A  K+G    A    E+M   G   D V+YNTLI+  C  GKL  A  
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALD 355

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL +ME  G      T+  +IDGLCK   I+ A    + M+  G   N   +N ++D L 
Sbjct: 356 LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 415

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           KD KID A  +   M  +    ++ TY+S++ + CK   +  A+ +L +   +G  +   
Sbjct: 416 KDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRM 451
               +++GL  +G  + A K+   +R+
Sbjct: 476 TYGTLINGLCKAGRTQVALKVLRGMRI 502



 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 196/389 (50%), Gaps = 4/389 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+  D V YN L++   +        ++ + M   GI PDVVT+N+L+    R   +  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ +L+EM   G+ PD  ++ +LM    + G  + A RV   M+    +    T N+++N
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK    ++AL   +     GF P+ +TYN  + GLC+   +  A  ++  +   GH P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY  ++ C  +N + +    IL+ M  +G   D   + T+IAA     RL+EA D  
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            Q+   GV  D+ ++N LIN  CK G    A  L +EM+  G   D+ T+  LID LC  
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G +  A   L+ M   G   +   YN I+D L K  +I+ A  VF+ M++    +++ T+
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           ++++  LCK K++  A +L+   +  G++
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQ 436



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   +E A  +    + +G     VT N+LI+ YC+    +     + +    G  PD
Sbjct: 134 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 193

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN+ + G  +N  +  +L ++D M++ G  PDV++YN +++CL + G+ +EA  +  
Sbjct: 194 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 253

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   TFN ++  LC     + AL + R +   G  P++ T+NILI  LCK G
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 313

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  + +E+ +SG  P+ +TY T++       K    L++L  M+  G       Y 
Sbjct: 314 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 373

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K  R++EA +  +QM   G+  + +++NTLI+  CK+ K++ A+ L+++M  +
Sbjct: 374 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISE 433

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T+  ++   CK G+IK A   LE M   GF+ ++  Y  +++ L K G+   A
Sbjct: 434 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 493

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + V   M +K        Y+ ++ +L +   +  A  L     + G        K V  G
Sbjct: 494 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 553

Query: 433 L-RHSGCRREA 442
           L R  G  +EA
Sbjct: 554 LCRGGGPIKEA 564



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 195/430 (45%), Gaps = 49/430 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNS 91
           ++LGV+      +  +D+Y  Q +  DA   ILN+++   GI  D V YN L+      S
Sbjct: 15  VKLGVV------HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGS 68

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +     +  EM   GI PDV ++N+LM  L +  +   A  + ++M    + P   TF 
Sbjct: 69  KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 128

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGD 210
            ++ G  +    + ALR+   + + G     VT N+LI G CK GR+  A  +I +E+ D
Sbjct: 129 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 188

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ ITY T +    +N      L+++  M ++G+  D F Y  V+    K G+L+E
Sbjct: 189 -GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 247

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + QMV  G   DI ++NTLI   C   +LE A  L  ++  +G   D YT  ILI+
Sbjct: 248 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 307

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            LCK G+      HL                              A+ +FE M+      
Sbjct: 308 ALCKVGDP-----HL------------------------------ALRLFEEMKNSGCTP 332

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  TY++++ NLC   +L  A  LL     +G          ++DGL       EA+++ 
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392

Query: 447 SKIRMAKISH 456
            ++ +  IS 
Sbjct: 393 DQMDLQGISR 402



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 1/216 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+  + +T+N LID  C+    D  + ++
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N+M   G+ P+ +TYNS++    +   +  + D+L+ M   G   DV +Y +L++ L + 
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 487

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A +V + M    + P    +N +L  L +     +AL +FR + + G  P+ +TY
Sbjct: 488 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 547

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAPNAITY 220
            I+ +GLC+  G ++ A   + E+ D G  P   ++
Sbjct: 548 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 583


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 227/485 (46%), Gaps = 75/485 (15%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ V T C    L  A + +      G+ PD VTYN L++A+C+         +L RM+
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++P   TYN+L++   R   +  +  +++ M   G  PD+W+YN L   L Q GK D
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326

Query: 130 EANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA R+  +M   G L P   T+N + +   K R + +ALR+   +++ G    LVT+NI+
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC---------------------- 226
           IKGLCK G L  A   L ++ D G AP+ ITY T++                        
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446

Query: 227 ---CF----------RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------- 264
               F          + ++Y+    +L +  ++G+  D   Y TV+AA+ K         
Sbjct: 447 KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR 506

Query: 265 --------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
                                     +GRLKEA D + +++  G+  D  +YN +I+ YC
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEG LE A+   ++M +  F+ D  T   L++GLC  G +  A    E   + G   ++ 
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++  + KDG +D A++ F  ME +    D+FTY+ ++  L +A R   A  +L   
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 415 LKSGV 419
            +SG 
Sbjct: 687 AESGT 691



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N+     C+A ++++A  +  +  RLG +LPDVVTYN L DA  +         +L  MR
Sbjct: 313 NVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMR 372

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G+   +VT+N +I G  ++  L  +L  L++M + G+ PDV +YN+L+H   + G   
Sbjct: 373 EKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIA 432

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M+   L   T T N +L  LCK +  + A  + +   + GF+P+ V+Y  ++
Sbjct: 433 KAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVM 492

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               K      A  +  E+ +    P+  TY T++K   R  + K  ++ L+ +  KG  
Sbjct: 493 AAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I A+ K G L+ A  +  +MV +  + D+V+ NTL+N  C  GKL+ A  L
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +   ++G + D  T+  LI  +CK G++  A      M   G   +   YN ++  L +
Sbjct: 613 FESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 672

Query: 370 DGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+ + A N+     ES  +  SF+   +  +          +K     +++       A
Sbjct: 673 AGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEA 732

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              +V+GL  SG  +EAK I
Sbjct: 733 YTKLVNGLCTSGQFKEAKAI 752



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 160/331 (48%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL T  LN  +   CK  R E+A+ ++    + G +PD V+Y  ++ AY +  + +    
Sbjct: 447 KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR 506

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M E  ++P + TYN+LI G +R   L  ++D L+E++E G+ PD  +YN ++H   
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  + A +    M+     P   T N ++NGLC N   D AL++F    + G   +++
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+ +CK G + TA     ++   G  P+A TY  ++       + +    +L  +
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G     F    +  + V      +     E+ V +       +Y  L+N  C  G+ 
Sbjct: 687 AESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQF 746

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + A  +LDEM ++G   D  T+  L++GL K
Sbjct: 747 KEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 176/382 (46%), Gaps = 10/382 (2%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y  L      FV  D   ++   +   G  P     ++ ++  +R  L   +  LL  + 
Sbjct: 101 YRHLFPLLLSFVPLDPLRSLHRHL--LGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLR 158

Query: 105 E-MGIPPDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
             + + P + + N+++  L +     P  +   F+ ++   L P   TFN++++  C   
Sbjct: 159 RRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKG 218

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
              +AL     +Q  G  P+ VTYN L+   C+ G L  AR +L  +   G AP   TY 
Sbjct: 219 TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYN 278

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    R    K   +++ AM   G+  D + Y  + A   + G++ EA    ++M   
Sbjct: 279 TLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERL 338

Query: 282 GVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           G  L D+V+YNTL +   K      A  LL+EM ++G +    TH I+I GLCK G ++G
Sbjct: 339 GTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEG 398

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A   L  M   G   ++  YN ++    K G I  A  + + M  +    D+FT +++++
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLY 458

Query: 397 NLCKAKRLPSASKLLLSCLKSG 418
           NLCK KR   A  LL S  + G
Sbjct: 459 NLCKEKRYEEAQGLLQSPPQRG 480


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 230/444 (51%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A A++   ++LG  PD+VT + L++ YC          ++++M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  T+ +LI G   ++  S ++ L+D+M++ G  PD+ +Y ++++ L + G  D 
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M  G +      +N +++GLCK ++ D+AL +F  +   G  P++ TY+ LI 
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T++ ++    +  K     ++   M ++    
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL EA    E M++     ++V+Y+TLI  +CK  ++E    L 
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+T LI G  +A +   A++  + M  +G   N+  YN ++D L K+
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+  A+ VFE ++      D +TY+ M+  +CKA ++    +L  +    GV     A 
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G + EA  +  K++
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMK 565



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 184/369 (49%), Gaps = 1/369 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   ++ A  +  +    G+ PDV TY+ LI   C +  +     +L+ M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P+VVT+++LI    +   L  +  L DEM++  I PD+++Y+SL++      + 
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  +F+ MI  D  P   T++ ++ G CK +  +  + +FR + + G V   VTY  L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  +A     A+ + K++   G  PN +TY  ++    +N K    + +   ++R   
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  +I    K G++++  +    +   GV  ++++YNT+I+ +C++G  E A  
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL +M++ G   +  T+  LI    + G+ + +   ++ M   GF  +      + + L 
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML- 618

Query: 369 KDGKIDHAI 377
            DG++D + 
Sbjct: 619 HDGRLDKSF 627



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 206/420 (49%), Gaps = 4/420 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +++ A  +  D ++    P +V +N L+ A  +   F+   ++  +M+  GIS D+ TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
             I    R S LS +L +L +M+++G  PD+ + +SL++      +  +A  +   M+  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P T TF  +++GL  +     A+ +   + + G  P+LVTY  ++ GLCK G +  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +LK++       + + Y TI+    + +     L + + M  KG   D F Y ++I+ 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V+++ LI+ + KEGKL  A  L DEM K+  + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T++ LI+G C    +  A+   E M       N+  Y+ ++    K  +++  + +F 
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M     V ++ TY++++H   +A+   +A  +    +  GV         ++DGL  +G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 181/398 (45%), Gaps = 35/398 (8%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A++   ++ G  PD+VTY  +++  C+    D   ++L +M +  I  DVV Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N++I G  +   +  +L+L  EM   GI PDV++Y+SL+ CL   G+  +A+R+  DMI 
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321

Query: 141 GDLTPCTATFNIML-----------------------------------NGLCKNRYTDN 165
             + P   TF+ ++                                   NG C +   D 
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A  MF  +      P +VTY+ LIKG CKA R+     + +E+   G   N +TYTT++ 
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
             F+ R       +   M   G   +   Y  ++    K G+L +A    E +    ++ 
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           DI +YN +I   CK GK+E  + L   +  +G   +   +  +I G C+ G+ + A   L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           + M + G   N   YN ++    +DG  + +  + + M
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 39/327 (11%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +F DM+     P    FN +L+ + K    +  + +   +Q  G   +L TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I I   C+  +L  A  +L ++   G+ P+ +T ++++     +++    + ++  M   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  D F + T+I       +  EA   ++QMV  G Q D+V+Y T++N  CK G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +MEK   E D   +  +IDGLCK  +                             
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKH----------------------------- 273

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
                 +D A+N+F  M+ K    D FTYSS++  LC   R   AS+LL   ++  +   
Sbjct: 274 ------MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                A++D     G   EA+K+  ++
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEM 354



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 115/225 (51%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA R+E+   +  +  + G++ + VTY  LI  + Q    D    +  +M   G+ P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++TYN L+ G  +N  L+ ++ + + +    + PD+++YN ++  + + GK ++   +F 
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++    ++P    +N M++G C+    + A  + + +++ G +P   TYN LI+   + G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
               +  ++KE+   G A +A T   +       R  K  L++LS
Sbjct: 588 DREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ + +  ++    +  K++L + +   M+  G + D + Y   I  F +  +L  A   
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M+  G + DIV+ ++L+N YC   ++  A  L+D+M + G++ D +T T LI GL  
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
                 A   ++ M + G   +L  Y  +V+ L K G ID A+++ + ME      D   
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y++++  LCK K +  A  L       G+R       +++  L + G   +A ++ S + 
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 451 MAKIS 455
             KI+
Sbjct: 321 ERKIN 325



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 4/158 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  +L KA  +     R  + PD+ TYN++I+  C+    + G+ +   +  
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+V+ YN++I+G  R      +  LL +M E G  P+  +YN+L+    + G  + 
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591

Query: 131 ANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYTD 164
           +  + ++M      GD +      N++ +G     + D
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLD 629


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 227/444 (51%), Gaps = 4/444 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L +A A+ +    +G  PDVVTYN LID Y +    +    +++ MR
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++G + DVVTYN+LI   ++   +  +     EM  +G+  +V + ++ +    + G   
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F  M    + P   T+  +++G CK    D+A+ +   +   G VP +VTY +++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G++  A  +L  +  +G   N + YTT++   F N+  +  L++L+ MK KG  
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K+ +L EA   + +M   G++ + V Y T+++ + K GK   A  L
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L ++   G + +  T+  LIDGLCKAG+I  A  H + M ++G D N++ Y  ++D   K
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A+++   M  K    D   Y+S++    K   L  A  L    +++G+++    
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYC 621

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
               + G  +    +EA+ + S++
Sbjct: 622 YTCFISGFCNMNMMQEARGVLSEM 645



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 175/375 (46%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  V  FCK   + +A  +       G++P+  TY  L+D  C+    D    +L+ M 
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VVTY  ++ G  +   ++ + D+L  M   G+  +   Y +L+H  F     +
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +  +M    +    + +  ++ GLCK +  D A  +   +   G  P  V Y  ++
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               KAG+   A  +L ++ DSG  PN +TY  ++    +       +     M+  G  
Sbjct: 487 DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLD 546

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F KIG L +A   M +MV  G+ LD V Y +LI+ + K+G L+ A+ L
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M + G + D Y +T  I G C    ++ AR  L  M   G   +  AYNC++ +  K
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQK 666

Query: 370 DGKIDHAINVFESME 384
            G ++ A ++   ME
Sbjct: 667 LGNMEEASSLQNEME 681



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 150/338 (44%), Gaps = 35/338 (10%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA RL+ A  ++ + +  G++P+VVTY +++D  C+         +L+ M  AG+  + 
Sbjct: 350 CKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANE 409

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV-------WS---------------- 114
           + Y +LI G   N     +LDLL+EM   G+  DV       W                 
Sbjct: 410 LLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHK 469

Query: 115 ------------YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
                       Y ++M   F+ GK  EA  +   +    L P   T+  +++GLCK   
Sbjct: 470 MDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+  F  +++ G  P +  Y  LI G CK G L  A  ++ E+ D G + + + YT+
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTS 589

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +    +    + + M   G   D + Y   I+ F  +  ++EA   + +M+  G
Sbjct: 590 LIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 649

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           +  D  +YN LI  Y K G +E A  L +EME     C
Sbjct: 650 ITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSSC 687



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 186/414 (44%), Gaps = 49/414 (11%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN---RVF 135
            +++L++    + LL  ++  L  + ++ +PP+  + N   H L +L +  +     R+F
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCN---HILLRLARNRQGGLVRRLF 191

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + +      P   TFNI+++ LCK      A  +F  ++  G  P++VTYN LI G  K 
Sbjct: 192 EHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G L     ++ E+  SG A + +TY  ++ C  +    +        MKR G   +    
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T + AF K G ++EA     QM   G+  +  +Y +L++  CK G+L+ A +LLDEM  
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           QG   +  T+T+++DGLCK G +  A   L  M + G  +N   Y  ++     +   + 
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR----------- 420
           A+++   M+ K    D   Y +++  LCK ++L  A  LL      G+R           
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 421 -ILKSAQK-----------------------AVVDGLRHSGCRREAKKIQSKIR 450
              K+ ++                       A++DGL  +G   EA     K+R
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 34/403 (8%)

Query: 58  FDAGYTILNRMREAGISP-------DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 110
           F     +L+R+  AG  P       D++   +L  G  R++L                 P
Sbjct: 91  FAHSRRLLSRLLGAGHRPHLAASLVDILHRAALALGPHRSAL-----------------P 133

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
            V  +++L+  L   G  D+A R    +    + P T T N +L  L +NR      R+F
Sbjct: 134 SV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLF 191

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
               +H   P + T+NI+I  LCK G L  AR +   +   G +P+ +TY +++    + 
Sbjct: 192 ----EHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
            + +    ++S M++ G   D   Y  +I  F K G +++A  Y  +M   GV  ++V+ 
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           +T ++ +CKEG +  A  L  +M  +G   +++T+T L+DG CKAG +  A + L+ M  
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPS 406
            G   N+  Y  +VD L K+GK+  A +V   ME   VK +   Y++++H     K    
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           A  LL      G+ +  S    ++ GL       EAK +  K+
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   L    +   CK  +L++A++++      G+ P+ V Y  ++DA+ +         
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVA 500

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+++ ++G+ P+VVTY +LI G  +   +  ++   D+M E+G+ P+V  Y +L+    
Sbjct: 501 LLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFC 560

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G   +A  +  +M+   ++     +  +++G  K      A  +   + + G   +L 
Sbjct: 561 KIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY 620

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY-KLG 236
            Y   I G C    ++ AR +L E+  +G  P+   Y  ++      RKY KLG
Sbjct: 621 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI------RKYQKLG 668


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 210/399 (52%), Gaps = 4/399 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           VT N+L+  YC+    +   + ++ M   G  PD  T+NSL+ G  R   +  +L++LD 
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           ML+ G  PD+++YNSL+  L +LG+ +EA  +   MI  D +P T T+N +++ LCK   
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A  + R L   G +P++ T+N LI+GLC     R A  + +E+   G  P+  TY  
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++       + +  L +L  M+  G + +   Y T+I  F K  R++EA +  ++M   G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  ++V+YNTLI+  CK  ++E A  L+D+M  +G + DK+T+  L+   C+AG+IK A 
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 398
             ++ M   G + +   Y  ++  L K G+++ A  +  ++++K       TY+ ++  L
Sbjct: 582 DIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKAL 641

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            + KR   A +L    ++ G        K V  GL   G
Sbjct: 642 FREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 226/484 (46%), Gaps = 40/484 (8%)

Query: 2   FG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG KL     N  +      N+L+  E +    +  G+ PDV T+N+LI A C+      
Sbjct: 170 FGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRP 229

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              ++  M   G+SPD  T+ +L+ G      ++ +L + ++M+  G P    + N L+H
Sbjct: 230 AILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVH 289

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              + G+ +E      +M      P   TFN ++NGLC+  +  +AL +   + + GF P
Sbjct: 290 GYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP 349

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--------------- 225
           ++ TYN LI GLCK G +  A  IL ++     +PN +TY T++                
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELA 409

Query: 226 ------------CCFRN--------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
                       C F +          ++L +E+   MK KG   D F Y  +I +    
Sbjct: 410 RVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GRL+EA   +++M + G   ++V+YNTLI+ +CK  ++E A  + DEME QG   +  T+
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
             LIDGLCK   ++ A   ++ M   G   +   YN ++    + G I  A ++ ++M  
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589

Query: 386 ----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
                DS TY +++  L KA R+  AS+LL +    G+ +       V+  L       E
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649

Query: 442 AKKI 445
           A ++
Sbjct: 650 AVRL 653



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 204/396 (51%), Gaps = 4/396 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ V  +CK  R+E+  + I +    G  PD  T+N L++  C+         IL+ M 
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PD+ TYNSLI G  +   +  ++++L++M+     P+  +YN+L+  L +  + +
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    + P   TFN ++ GLC       A+ +F  ++  G  P+  TYN+LI
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  GRL  A  +LKE+  SG + N +TY T++    +N++ +   EI   M+ +G +
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGIS 523

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I    K  R++EA   M+QM+ +G++ D  +YN+L+  +C+ G ++ A  +
Sbjct: 524 RNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADI 583

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +  M   G E D  T+  LI GL KAG ++ A   L  +   G     + YN ++  L +
Sbjct: 584 VQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFR 643

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 401
           + +   A+ +F  M    +  D+ TY  +   LC  
Sbjct: 644 EKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSG 679



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 187/410 (45%), Gaps = 3/410 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   +E+A  I+   I     P+ VTYN LI   C+    +    +   +  
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDV T+NSLI G    +    +++L +EM   G  PD ++YN L+  L   G+ +E
Sbjct: 415 KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEE 474

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M     +    T+N +++G CKN+  + A  +F  ++  G    +VTYN LI 
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  R+  A  ++ ++   G  P+  TY +++    R    K   +I+  M   G   
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K GR++ A+  +  +   G+ L   +YN +I    +E +   A  L 
Sbjct: 595 DSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLF 654

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH-LEYMNKIGFDSNLEAYNCIVDRLGK 369
            EM ++G   D  T+ ++  GLC  G   G  +  L  M   GF  +  ++  + + L  
Sbjct: 655 REMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCA 714

Query: 370 DGKIDHAINVFESMEVKDSFTYS--SMVHNLCKAKRLPSASKLLLSCLKS 417
               D  I +   +  + +F+ S  SM+    K ++   A   L   L S
Sbjct: 715 LSMEDTLIKLVNRVMKQANFSDSEVSMIMGFLKIRKFQDALATLGRILSS 764



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 199/457 (43%), Gaps = 75/457 (16%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +P  V Y  ++    +  SF +   +L  M+  G      T+  LI    +  L   ++ 
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVA 161

Query: 99  LLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++D M E  G+  D ++YN L++ L    K      V   M+   + P   TFNI++  L
Sbjct: 162 VVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221

Query: 158 CKNRYTDNALRMFRGLQKHGFVPEL----------------------------------- 182
           C+      A+ M   +  +G  P+                                    
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT N+L+ G CK GR+      + E+ + G  P+  T+ +++    R    K  LEIL  
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M ++G+  D F Y ++I    K+G ++EA + + QM+      + V+YNTLI+  CKE +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 303 LEA-----------------------------------AYLLLDEMEKQGFECDKYTHTI 327
           +E                                    A  L +EM+ +G   D++T+ +
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-- 385
           LID LC  G ++ A   L+ M   G   N+  YN ++D   K+ +I+ A  +F+ ME+  
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 386 --KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             ++  TY++++  LCK +R+  A++L+   L  G++
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 6/342 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLD-EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           P   T   L     R S     LDLLD    +    P    Y  ++  L + G      R
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGL 192
           V Q+M          TF I++    K    D A+ +   +++  G   +  TYN L+  L
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
               +L+    +   +   G  P+  T+  ++K   R  + +  + ++  M   G + D 
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             + T++  F++ G +  A    EQMV  G     V+ N L++ YCKEG++E     +DE
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M  +GF  D++T   L++GLC+ G++K A   L+ M + GFD ++  YN ++  L K G+
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 373 IDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 410
           ++ A+ +   M ++D    + TY++++  LCK  ++  A++L
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 231/484 (47%), Gaps = 75/484 (15%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ V T C    L  A + +      G+ PDVVTYN L+ A+C+        T+L RM+
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + GI+P   TYN+L++   R   +  + ++++ M   G  PD+W+YN L   L Q GK D
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA ++  +M     ++P   T+N +++   K + + +AL +   ++  G    LVT+NI+
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRN---------------- 230
           +KGLC+ G+L  A   LK + + G AP+ ITY T++   C  RN                
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452

Query: 231 -----------------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------- 264
                            ++Y+   E+L +  ++G+  D   Y TV+AA+ K         
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 265 --------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
                                     IG+L EA D + +++  G+  D  +YN +I+ YC
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEG LE A+   ++M +  F+ D  T   L++GLC  G ++ A    E   + G   ++ 
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVI 632

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++  L KDG +D A++ F  ME +    D+FTY+ ++  L +A R   A  +L   
Sbjct: 633 TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692

Query: 415 LKSG 418
            +SG
Sbjct: 693 DESG 696



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 210/464 (45%), Gaps = 41/464 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N+     C+A ++++A  +  +   L ++ PDVVTYN L+DA  ++        +L  MR
Sbjct: 319 NVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMR 378

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+   +VT+N ++ G  R   L  +L  L  M E G+ PDV +YN+L+    +     
Sbjct: 379 DKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVA 438

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M+   L   T T N +L  LCK +  + A  + R   + GFVP+ V+Y  ++
Sbjct: 439 KAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVM 498

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               K  +   A ++  E+      P+  TY T++K      K    ++ L+ + +KG  
Sbjct: 499 AAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLV 558

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I A+ K G L++A  +  +M+ +  + D+V+ NTL+N  C  GKLE A  L
Sbjct: 559 PDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKL 618

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +   ++G + D  T+  LI  LCK G++  A      M   G   +   YN ++  L +
Sbjct: 619 FESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678

Query: 370 DGKIDHAINVFESM----------------------------EVK------------DSF 389
            G+ + A N+   +                            EVK            D  
Sbjct: 679 AGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQE 738

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +Y+  V  LC   +L  A  +L   ++ G+ +  S    +++GL
Sbjct: 739 SYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 9/400 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   C+  +LE+A   +      G+ PDV+TYN LIDAYC+  +    + +++ M  
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+  D  T N+L+    +      + +LL    + G  PD  SY ++M   F+  KP+ 
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++ +M    LTP   T+N ++ GLC       A+     L K G VP+  TYNI+I 
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G L  A     ++ ++   P+ +T  T+M     + K +  +++  +   KG   
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKV 629

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I A  K G +  A  +   M   G+Q D  +YN +++   + G+ E A  +L
Sbjct: 630 DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689

Query: 311 DEMEKQGFECDKYTHTILIDGL--CKAGNIKGARLHLEY-MNKIGFDSNLEAYNCIVDRL 367
            ++++ G   +++++ ++       K G     +   E   N  G D   E+YN  V  L
Sbjct: 690 HKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQ--ESYNKSVKEL 747

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
              G++  A  V + M  K    DS TY +++  L K ++
Sbjct: 748 CVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 3/333 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+ T  LN  +   CK  R E+AE ++    + G +PD V+Y  ++ AY +    +    
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M +  ++P + TYN+LI G      L+ ++D L+E+++ G+ PD  +YN ++H   
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  ++A +    M+     P   T N ++NGLC +   + A+++F    + G   +++
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVI 632

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+ LCK G + TA     ++   G  P+A TY  ++       + +    +L  +
Sbjct: 633 TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692

Query: 244 KRKGYTFDGFGYCTV--IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
              G   + F Y  +   A  VK G+  E     E    +    D  SYN  +   C  G
Sbjct: 693 DESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESG-GNAKGGDQESYNKSVKELCVGG 751

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +L+ A  +LDEM ++G   D  T+  L++GL K
Sbjct: 752 QLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 11/318 (3%)

Query: 110 PDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           P + + N+++  L +     P  +  VF+ +I   L P   TFN++++  C      +AL
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
                +Q  G  P++VTYN L+K  C+ G L  AR +L  +   G AP   TY T++   
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMVTDGVQ 284
            R    K    ++ AM   G+  D + Y  + A   + G++ EA    D ME +    V 
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI--VS 348

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D+V+YNTL++   K  +   A  LL+EM  +G +    TH I++ GLC+ G ++ A   
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L+ M + G   ++  YN ++D   K   +  A  + + M       D+FT +++++NLCK
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468

Query: 401 AKRLPSASKLLLSCLKSG 418
            KR   A +LL S  + G
Sbjct: 469 EKRYEEAEELLRSPPQRG 486



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 5/182 (2%)

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G L +A   +  M   G+  D+V+YNTL+  +C++G L  A  LL  M+K+G    + T+
Sbjct: 224 GTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATY 283

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
             L+    + G IK A   +E M   GF+ +L  YN +   L + GK+D A  + + ME 
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343

Query: 385 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
                 D  TY+++V    K +R   A  LL      GV+        VV GL   G   
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLE 403

Query: 441 EA 442
           EA
Sbjct: 404 EA 405



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 36/226 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  +CK   LEKA       +     PDVVT N L++  C     +    +     E
Sbjct: 565 NIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE 624

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DV+TYN+LI    ++  +  +L    +M   G+ PD ++YN ++  L + G+ +E
Sbjct: 625 KGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEE 684

Query: 131 ANRVFQDM-ICGDLTP-------------------------CTA----------TFNIML 154
           A  +   +   G L+                          C +          ++N  +
Sbjct: 685 AQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSV 744

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             LC       A  +   + + G   +  TY  L++GL K  + +T
Sbjct: 745 KELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQT 790


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 223/433 (51%), Gaps = 5/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+E A   I   I  G  PD +TYN  ++  CQ         +++ M 
Sbjct: 254 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TYN ++    +N  L  +  +L++M++ G  PD+ ++N+L+  L    + +
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    ++P   TFNI++N LCK      ALR+F  ++  G  P+ VTYN LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC  G+L  A  +LK++  +G   + ITY TI+    +  + +   E+   M  +G +
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I    K  ++ +A   + QM+++G+Q + ++YN+++  YCK+G ++ A  +
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   GFE D  T+  LI+GLCKAG  + A   L  M   G     +AYN ++  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRILKS 424
              I  A+++F  M    E  D+ TY  +   LC+    +  A   +L  +  G     S
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 425 AQKAVVDGLRHSG 437
           + + + +GL + G
Sbjct: 674 SFRMLAEGLLNLG 686



 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 227/456 (49%), Gaps = 5/456 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG +  T + N  +    + ++++  E++  +    G+ PDVVT+N L+ A C+     
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +L  M   G++PD  T+ +L+ G      +  +L +   MLEMG      + N L+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +LG+ ++A    Q  I     P   T+N  +NGLC+N +  +AL++   + + G  
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNI++  LCK G+L  A+ IL ++ D G  P+  T+ T++       + +  L++
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              +  KG + D + +  +I A  K+G    A    E+M   G   D V+YNTLI+  C 
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 438

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GKL  A  LL +ME  G      T+  +IDGLCK   I+ A    + M+  G   N   
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 498

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +N ++D L KD KID A  +   M  +    ++ TY+S++ + CK   +  A+ +L +  
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            +G  +       +++GL  +G  + A K+   +R+
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   +E A  +    + +G     VT N+LI+ YC+    +     + +    G  PD
Sbjct: 226 FVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN+ + G  +N  +  +L ++D M++ G  PDV++YN +++CL + G+ +EA  +  
Sbjct: 286 QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   TFN ++  LC     + AL + R +   G  P++ T+NILI  LCK G
Sbjct: 346 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  + +E+ +SG  P+ +TY T++       K    L++L  M+  G       Y 
Sbjct: 406 DPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYN 465

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K  R++EA +  +QM   G+  + +++NTLI+  CK+ K++ A+ L+++M  +
Sbjct: 466 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISE 525

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T+  ++   CK G+IK A   LE M   GF+ ++  Y  +++ L K G+   A
Sbjct: 526 GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVA 585

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + V   M +K        Y+ ++ +L +   +  A  L     + G        K V  G
Sbjct: 586 LKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRG 645

Query: 433 L-RHSGCRREA 442
           L R  G  +EA
Sbjct: 646 LCRGGGPIKEA 656



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 195/430 (45%), Gaps = 49/430 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNS 91
           ++LGV+      +  +D+Y  Q +  DA   ILN+++   GI  D V YN L+      S
Sbjct: 107 VKLGVV------HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGS 160

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +     +  EM   GI PDV ++N+LM  L +  +   A  + ++M    + P   TF 
Sbjct: 161 KMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFT 220

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGD 210
            ++ G  +    + ALR+   + + G     VT N+LI G CK GR+  A  +I +E+ D
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ ITY T +    +N      L+++  M ++G+  D F Y  V+    K G+L+E
Sbjct: 281 -GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 339

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + QMV  G   DI ++NTLI   C   +LE A  L  ++  +G   D YT  ILI+
Sbjct: 340 AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILIN 399

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            LCK G+      HL                              A+ +FE M+      
Sbjct: 400 ALCKVGDP-----HL------------------------------ALRLFEEMKNSGCTP 424

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  TY++++ NLC   +L  A  LL     +G          ++DGL       EA+++ 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 447 SKIRMAKISH 456
            ++ +  IS 
Sbjct: 485 DQMDLQGISR 494



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 1/216 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+  + +T+N LID  C+    D  + ++
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N+M   G+ P+ +TYNS++    +   +  + D+L+ M   G   DV +Y +L++ L + 
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A +V + M    + P    +N +L  L +     +AL +FR + + G  P+ +TY
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAPNAITY 220
            I+ +GLC+  G ++ A   + E+ D G  P   ++
Sbjct: 640 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSF 675



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 42/308 (13%)

Query: 153 MLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L  L +    D ALRM    L +  F P    Y  +I+ L   G L   + ++ E+   
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 212 GH-------------------------------------APNAITYTTIMKCCFRNRKYK 234
           GH                                       + + Y  ++       K K
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           L   + S M  +G   D   + T++ A  +  +++ A   +E+M + GV  D  ++ TL+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             + +EG +EAA  +   M + G    K T  +LI+G CK G ++ A  +++     GF+
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            +   YN  V+ L ++  + HA+ V + M       D FTY+ +V+ LCK  +L  A  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 411 LLSCLKSG 418
           L   +  G
Sbjct: 344 LNQMVDRG 351


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 225/436 (51%), Gaps = 4/436 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ ++L  A A++   ++LG  PD+VT + L++ YC          ++++M E
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VT+N+LI G   ++  S ++ L+D+M++ G  PD+ +Y ++++ L + G  D 
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M  G +      +N +++GLCK ++ D+A  +F  ++  G  P++ TYN LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L  + +    PN +T++ ++    +  K     ++   M ++    
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL EA    E M++     ++V+YNTLI  +CK  ++E    L 
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+  LI GL +AG+   A+   + M   G   ++  Y+ ++D L K 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++      D +TY+ M+  +CKA ++     L  S    GV+      
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538

Query: 427 KAVVDGLRHSGCRREA 442
             ++ G    G + EA
Sbjct: 539 TTMISGFCRKGLKEEA 554



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 193/401 (48%), Gaps = 5/401 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++ A +++    +  +  DVV YN +ID  C++   D  + + N+M   GI PD
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYNSLI+        S +  LL  M+E  I P+V ++++L+    + GK  EA +++ 
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   + P   T++ ++NG C +   D A  MF  +      P +VTYN LIKG CKA 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+     +  +I   M   G   D   Y 
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G+L++A    E +    ++ DI +YN +I   CK GK+E  + L   +  +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +   +T +I G C+ G  + A      M + G   +   YN ++    +DG    +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 589

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             + + M     V D+ T  SMV N+    RL  +   +LS
Sbjct: 590 AELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSYLEMLS 629



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 187/368 (50%), Gaps = 1/368 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   ++ A A+       G+ PDV TYN LI   C +  +     +L+ M
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P+VVT+++LI    +   L  +  L DEM++  I PD+++Y+SL++      + 
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  +F+ MI  D  P   T+N ++ G CK +  +  + +FR + + G V   VTYN L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+GL +AG    A+ I K++   G  P+ ITY+ ++    +  K +  L +   +++   
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  +I    K G++++  D    +   GV+ +++ Y T+I+ +C++G  E A  
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM++ G   D   +  LI    + G+   +   ++ M   GF  +    + +++ L 
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML- 615

Query: 369 KDGKIDHA 376
            DG+++ +
Sbjct: 616 HDGRLEKS 623



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 204/416 (49%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L+ A  +  + ++   LP +V +N L+ A  +   FD   ++  RM+   IS D+ +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI    R S L  +L +L +M+++G  PD+ + +SL++      +  +A  +   M+  
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P T TFN +++GL  +     A+ +   + + G  P+LVTY  ++ GLCK G +  A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +LK++       + + Y TI+    + +       + + M+ KG   D F Y ++I+ 
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V+++ LI+ + KEGKL  A  L DEM K+  + D
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T++ LI+G C    +  A+   E M       N+  YN ++    K  +++  + +F 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            M     V ++ TY++++  L +A     A K+    +  GV         ++DGL
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 182/398 (45%), Gaps = 4/398 (1%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +  D    +   M ++   P +V +N L++   +       + L + M  + I  D++SY
Sbjct: 59  LKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSY 118

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++C  +  +   A  V   M+     P   T + +LNG C ++   +A+ +   + +
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G+ P+ VT+N LI GL    +   A  ++ ++   G  P+ +TY  ++    +     L
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            L +L  M++     D   Y T+I    K   + +A     +M T G++ D+ +YN+LI+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             C  G+   A  LL  M ++    +  T + LID   K G +  A    + M K   D 
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 411
           ++  Y+ +++      ++D A ++FE M  KD F    TY++++   CKAKR+    +L 
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               + G+         ++ GL  +G    A+KI  K+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 115/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+E+   +  +  + G++ + VTYN LI    Q    D    I  +M  
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G  +   L  +L + + + +  + PD+++YN ++  + + GK ++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P    +  M++G C+    + A  +FR +++ G +P+   YN LI+
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G   +A T + ++      R  K  LE+LS
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 4/263 (1%)

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +  E+  S   P+ + +  ++    + +K+ L + +   M+    ++D + Y 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F +  +L  A   + +M+  G + DIV+ ++L+N YC   ++  A  L+D+M + 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G++ D  T   LI GL        A   ++ M + G   +L  Y  +V+ L K G ID A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++ + ME      D   Y++++  LCK K +  A  L       G+R       +++  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 433 LRHSGCRREAKKIQSKIRMAKIS 455
           L + G   +A ++ S +   KI+
Sbjct: 300 LCNYGRWSDASRLLSNMIERKIN 322



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 95/196 (48%), Gaps = 1/196 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +    +A   + A+ I    +  GV PD++TY++L+D  C++   +    + 
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             ++++ + PD+ TYN +I G  +   +    DL   +   G+ P+V  Y +++    + 
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  +EA+ +F++M      P +  +N ++    ++     +  + + ++  GFV +  T 
Sbjct: 549 GLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608

Query: 186 NILIKGLCKAGRLRTA 201
           +++I  L   GRL  +
Sbjct: 609 SMVINML-HDGRLEKS 623


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 225/420 (53%), Gaps = 4/420 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTYN L++A  +    +    +   ++ A  +PDVV+Y+ LI    R      +L++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + EM   G  P++W+YN+L+ CL + G+ DEA R+  +M      P   T+N +++ L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +F  +++ G VP+  TYN LI GL K GR + A  +L+E+   G  P+ +T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y++++    ++ +     ++   MKR+G   D   +  ++ A  K GR+ +A + +++M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+  +V+YN LI  + K G L  AY LLDEM++ G + D  T++ LI GL KA  + 
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A   L+ M K G   +   YN +++ LGK G ++ A  +F+ M+ K    D  TYS+++
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             L KA R+ SA  L       G++       +++  L  +G   +A ++ S++R   +S
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 211/412 (51%), Gaps = 4/412 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V    KA + ++A  ++ +    G +PDV TYN LI    +       +T+   MRE
Sbjct: 83  NTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRE 142

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TYNSLI G  +      +++LL+EM   G PPDV +Y+SL+  L + G+  +
Sbjct: 143 RGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVK 202

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++FQ+M      P + TF  +++ L K    D+AL +   +++ G  P +VTYN LI 
Sbjct: 203 AFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIA 262

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G L  A  +L E+  +G  P+ +TY+ ++    +  +     ++L  M+++G   
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K G L +A    ++M + G   D+V+Y+TLI    K  ++E+A +L 
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EME  G + D +T+  +I  L KAG +  A      M   G   ++  YN  ++ LG+ 
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           G+   A  +FE M+    + D  TY +++  L K K +  A  LL   ++ G
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 227/439 (51%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    KA + E+A+ +  +       PDVV+Y+ LI++  +   ++A   ++  M+ 
Sbjct: 13  NSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQA 72

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++ TYN+L+    +      +L LL EM + G  PDV +YN L+  L + G+  E
Sbjct: 73  KGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSE 132

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M      P T T+N ++ GL K   +  A+ +   +++HG  P+++TY+ LI 
Sbjct: 133 AFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLIT 192

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K G    A  + +E+   G  P++IT+T +M    +  +    LE+L  MK +G   
Sbjct: 193 GLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKP 252

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +IA F K+G L EA + +++M  +G + D+V+Y+ LI    K  +L+ A  +L
Sbjct: 253 GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL 312

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +MEK+G   D  T+  LI+GL KAG +  A    + M   G + ++  Y+ ++  LGK 
Sbjct: 313 KKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKA 372

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +++ A  +FE ME      D FTY S++  L KA ++  A +L       G+       
Sbjct: 373 ARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITY 432

Query: 427 KAVVDGLRHSGCRREAKKI 445
            A ++ L   G  +EA+KI
Sbjct: 433 NAFLNSLGRGGRFKEARKI 451



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 208/410 (50%), Gaps = 4/410 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           + +  +A + E A  ++ +    G  P++ TYN L+D   +   FD    +L  MR+ G 
Sbjct: 51  INSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGC 110

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDV TYN LI+   +   LS +  L  EM E G  PD ++YNSL++ L ++G+  +A  
Sbjct: 111 VPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAME 170

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M      P   T++ ++ GL K+  T  A ++F+ +++ G  P+ +T+  L+  L 
Sbjct: 171 LLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALG 230

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAGR+  A  +L E+ + G  P  +TY  ++    +         +L  MKR G   D  
Sbjct: 231 KAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVV 290

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I   +K  +L EA   +++M  +G   D ++YNTLIN   K G L  A  L D M
Sbjct: 291 TYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM 350

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           + +G   D  T++ LI  L KA  ++ A +  E M  +G   +L  Y  I+  LGK G++
Sbjct: 351 KSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQV 410

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           D A  +F  M  K    D  TY++ +++L +  R   A K+     +SG+
Sbjct: 411 DDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 220/506 (43%), Gaps = 74/506 (14%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N  + T  KA RL +A  +  +    G +PD  TYN LI    +         +L  
Sbjct: 115 RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEE 174

Query: 68  MREAGISPDVVTYNSLIAGATRN--------------------------SLLSC------ 95
           M   G  PDV+TY+SLI G  ++                          +L+        
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234

Query: 96  ---SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
              +L+LLDEM E G+ P V +YN+L+    ++G   EA  +  +M      P   T++ 
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++ GL K    D A ++ + ++K G  P+ +TYN LI GL KAG L  A  +   +   G
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ +TY+T++    +  + +    +   M+  G   D F YC++I    K G++ +A 
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +M   G+  D+++YN  +N   + G+ + A  + ++M++ G   D  T+  L+ GL
Sbjct: 415 RLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474

Query: 333 CKA-----------------------------------GNIKGARLHLEYMNKIGFDSNL 357
            K                                    GN+  A   L++ N  G     
Sbjct: 475 SKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGA 534

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
            +YN ++D L K G++  A N  E ++ +    D  +YSS++  L +  ++ +A +LL  
Sbjct: 535 SSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCR 439
             K G+++   +   +V  L+  G R
Sbjct: 595 MSKRGLKLSPRSYSNLVRKLQDWGAR 620



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 4/311 (1%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           +P   T+N +LN L K    + A  +F  L+   + P++V+Y+ LI  L +AG+   A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           ++ E+   G  PN  TY T++ C  +  ++   L +L+ M+  G   D   Y  +I+   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K GRL EA     +M   G   D  +YN+LI    K G+ + A  LL+EME+ G   D  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T++ LI GL K G    A    + M + G   +   +  ++D LGK G++D A+ + + M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 384 E---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           +   VK    TY++++    K   L  A  LL    ++G +        ++ GL  +   
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 440 REAKKIQSKIR 450
            EA ++  K+ 
Sbjct: 306 DEACQVLKKME 316


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 4   KLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           K+S  L+  N  +   CK  +L KA  ++ D    G  P+VVTYN LID YC+       
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284

Query: 62  Y---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           Y    IL  M E  +SP+ VT+N LI G  ++  LS +L + +EM   G+ P V +YNSL
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++ L   GK +EA  +  +M+  +L P   T+N ++NG CK +  + A  +F  + K G 
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P ++T+N L+ G CK G++  A  + K + + G  PNA TY  ++    R  K +    
Sbjct: 405 TPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L+ M+ +G   D   Y  +I+A+ +    K+A   +++M+  G++   ++YN L+N YC
Sbjct: 465 LLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYC 524

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            EG L AA  L  +MEK+G   +  T+ +LI G C+ G ++ A   L  M + G   N  
Sbjct: 525 MEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 584

Query: 359 AYNCIVDRLGKDG 371
            Y  I + + + G
Sbjct: 585 TYEIIKEEMMEKG 597



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 219/404 (54%), Gaps = 9/404 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           V++ N L+ A  +   F     +   M    ISP+++T+N++I G  +   L+ + D++D
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 102 EMLEMGIPPDVWSYNSLM--HC-LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +M   G  P+V +YN+L+  +C + ++GK  +A+ + ++M+   ++P + TFN++++G C
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K+     AL++F  +Q  G  P +VTYN L+ GLC  G+L  A+ +L E+  S   PN I
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY  ++    + +  +   E+   + ++G T +   + T++  + K G+++EA    + M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGN 337
           +  G   +  +YN LI  +C+EGK+E    LL+EM+ +G + D  T+ ILI   C K   
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSS 393
            K ARL  E ++K G   +   YN +++    +G +  A+N+ + ME +  +    TY+ 
Sbjct: 495 KKAARLIDEMLDK-GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNV 553

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           ++   C+  +L  A+ LL   L+ G+   ++  + + + +   G
Sbjct: 554 LIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 176/331 (53%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           C   +  ++ KA+AI+ + +   V P+ VT+N+LID +C+  +  A   +   M+  G+ 
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P VVTYNSL+ G      L+ +  LLDEML   + P+V +YN+L++   +    +EA  +
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F ++    LTP   TFN +L+G CK    + A  + + + + GF+P   TYN LI G C+
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G++   + +L E+   G   + +TY  ++      ++ K    ++  M  KG       
Sbjct: 456 EGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++  +   G L+ A +  +QM  +G   ++V+YN LI  YC++GKLE A  LL+EM 
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEML 575

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           ++G   ++ T+ I+ + + + G +     HL
Sbjct: 576 EKGLIPNRTTYEIIKEEMMEKGFLPDIEGHL 606



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 181/354 (51%), Gaps = 11/354 (3%)

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           V S N L+  L +  +      V+++MI   ++P   TFN ++NGLCK    + A  +  
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGR---LRTARWILKELGDSGHAPNAITYTTIMKCCF 228
            ++  GF P +VTYN LI G CK GR   +  A  ILKE+ ++  +PN++T+  ++    
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           ++      L++   M+ +G       Y +++      G+L EA   +++M++  ++ +++
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YN LIN YCK+  LE A  L D + KQG   +  T   L+ G CK G ++ A L  + M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
            + GF  N   YNC++    ++GK++   N+   M+ +    D+ TY+ ++   C+ K  
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA----KKIQSKIRMAKI 454
             A++L+   L  G++        +++G    G  R A    K+++ + R A +
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 13/244 (5%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG---YTFDGFGYCTVIAAFVKIGRLKEAT 272
           N+I    ++     N K  LGLE   A KR G   Y         +++A VK        
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLE---AFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVE 215

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              ++M+   +  +++++NT+IN  CK GKL  A  ++D+M+  GF  +  T+  LIDG 
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275

Query: 333 CKAGNIK---GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           CK G +     A   L+ M +     N   +N ++D   KD  +  A+ VFE M+ +   
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               TY+S+V+ LC   +L  A  LL   L S ++       A+++G        EA+++
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395

Query: 446 QSKI 449
              I
Sbjct: 396 FDNI 399


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 206/394 (52%), Gaps = 4/394 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  FCK  R+++A + I + +  G  PD  TYN L++  C+         +++ M 
Sbjct: 276 VNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD+ TYNSLI+G  +   +  ++ +LD+M+     P+  +YN+++  L +  + D
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + +    + P   TFN ++ GLC +    +A+ +F  ++  G  P+  TYN+LI
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC + +L  A  +LKE+  +G A N + Y T++    +N++ +   EI   M+ +G +
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K  R+++A   M+QM+ +G++ D  +YN+L+  +CK G ++ A  +
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +  M   G   D  T+  LI GLCKAG ++ A   L  +   G      AYN ++  L K
Sbjct: 576 VQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFK 635

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
             +   A+ +F  M    E  D+ TY  +   LC
Sbjct: 636 RNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669



 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 227/481 (47%), Gaps = 39/481 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  TR  N+ +     AN+L+  E+     +R  +  DV T+N+LI A C+         
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++  M   G+SPD  T+ +++ G      L  +L + ++M+E G P    + N L++   
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ D+A    Q+ +     P   T+N ++NGLCK  +  +A+ +   +   G  P++ 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNR----------- 231
           TYN LI GLCK G +  A  IL ++     +PNA+TY  I+   C  NR           
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 232 -----------------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                                   +K  +++   MK KG   D F Y  +I +     +L
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           +EA + +++M  +G   ++V YNTLI+ +CK  ++E A  + DEME QG   D  T+  L
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           IDGLCK+  ++ A   ++ M   G   +   YN ++    K G I  A ++ ++M     
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY++++  LCKA R+  AS+LL S    G+ +   A   V+  L       EA +
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644

Query: 445 I 445
           +
Sbjct: 645 L 645



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 205/399 (51%), Gaps = 4/399 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           VT N+LI+ +C+    D   + +      G  PD  TYN+L+ G  +      +++++D 
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           ML  G+ PD+++YNSL+  L +LG+ +EA ++   M+  D +P   T+N +++ LCK   
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D A  + R L   G +P++ T+N LI+GLC +   ++A  + +E+   G  P+  TY  
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++     +RK +  L +L  M+  G   +   Y T+I  F K  R++EA +  ++M   G
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           V  D V+YNTLI+  CK  ++E A  L+D+M  +G   DK+T+  L+   CK G+IK A 
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             ++ M   G + ++  Y  ++  L K G++  A  +  S+++K        Y+ ++  L
Sbjct: 574 DIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQAL 633

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            K  R   A +L    L           K V  GL + G
Sbjct: 634 FKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 155/330 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   +E+A  I+   +     P+ VTYN +I + C+    D    I   +  
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDV T+NSLI G   +S    ++DL +EM   G  PD ++YN L+  L    K +E
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEE 466

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M           +N +++G CKN+  + A  +F  ++  G   + VTYN LI 
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+ R+  A  ++ ++   G  P+  TY +++    +    K   +I+  M   G   
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP 586

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I+   K GR++ A+  +  +   G+ L   +YN +I    K  +   A  L 
Sbjct: 587 DIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF 646

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            EM  +    D  T+ I+  GLC  G   G
Sbjct: 647 REMLDKSEPPDAITYKIVYRGLCNGGGPIG 676



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 171/390 (43%), Gaps = 74/390 (18%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E  I PD   YN L++ L    K          M+   +    +TFNI++  LCK     
Sbjct: 161 EYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVR 220

Query: 165 NALRMFRGLQKHGFVPELVTY-----------------------------------NILI 189
            A+ M   +  +G  P+  T+                                   N+LI
Sbjct: 221 PAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLI 280

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GR+  A   ++E    G  P+  TY T++    +    K  +E++ AM   G  
Sbjct: 281 NGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLD 340

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE----- 304
            D + Y ++I+   K+G ++EA   ++QMV+     + V+YN +I+  CKE +++     
Sbjct: 341 PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400

Query: 305 ------------------------------AAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                                         +A  L +EM+ +G   D++T+ +LID LC 
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
           +  ++ A   L+ M   G   N+  YN ++D   K+ +I+ A  +F+ ME+    +DS T
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           Y++++  LCK+KR+  A++L+   +  G+R
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  FCK  R+E+AE I  +    GV  D VTYN LID  C+    +    ++++M
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ PD  TYNSL+    +   +  + D++  M   G  PD+ +Y +L+  L + G+ 
Sbjct: 545 IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A+R+ + +    +      +N ++  L K   T  A+R+FR +      P+ +TY I+
Sbjct: 605 QVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664

Query: 189 IKGLCKAG 196
            +GLC  G
Sbjct: 665 YRGLCNGG 672



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 136/328 (41%), Gaps = 78/328 (23%)

Query: 161 RYTDN--ALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG----- 212
           R TD   ALR+F    K   FVP    Y  +++ L KAG     R +L+E+  SG     
Sbjct: 73  RQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDR 132

Query: 213 -------------------------------HAPNAITYTTIMKCCFRNRKYKLGLEILS 241
                                            P+   Y  ++       K KL     S
Sbjct: 133 GIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHS 192

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY----------- 290
           +M R+    D   +  +I A  K  +++ A   ME+M + G+  D  ++           
Sbjct: 193 SMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGG 252

Query: 291 ------------------------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
                                   N LIN +CK+G+++ A   + E   +GF  D++T+ 
Sbjct: 253 NLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYN 312

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            L++GLCK G+ K A   ++ M   G D ++  YN ++  L K G+I+ A+ + + M  +
Sbjct: 313 TLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSR 372

Query: 387 D----SFTYSSMVHNLCKAKRLPSASKL 410
           D    + TY++++ +LCK  R+  A+++
Sbjct: 373 DCSPNAVTYNAIISSLCKENRVDEATEI 400



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 1/184 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK+ R+E A  ++   I  G+ PD  TYN L+  +C+         I+  M  
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G +PD+VTY +LI+G  +   +  +  LL  +   G+     +YN ++  LF+  +  E
Sbjct: 582 SGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHE 641

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNR-YTDNALRMFRGLQKHGFVPELVTYNILI 189
           A R+F++M+     P   T+ I+  GLC        A+     + + G +PE  ++ +L 
Sbjct: 642 AMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLA 701

Query: 190 KGLC 193
           +GLC
Sbjct: 702 EGLC 705



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 1/160 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK   ++KA  I+      G  PD+VTY  LI   C+         +L  ++ 
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP-D 129
            G+      YN +I    + +    ++ L  EML+   PPD  +Y  +   L   G P  
Sbjct: 617 KGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIG 676

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           EA     +MI     P  ++F ++  GLC     D  +++
Sbjct: 677 EAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKL 716


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 207/396 (52%), Gaps = 4/396 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ +  +CK  R+  A   I   I  G  PD VT++  ++  CQ    D    +L  M 
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDV TY+++I     N  L  +  ++++M++ G  PD  ++N+L+  L    + +
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + +++    L+P   TFNI++N LCK      A+R+F  ++  G  P+ VTYNILI
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILI 448

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC +G+L  A  +LKE+  SG   + +TY TI+    + R+ +   E+   M   G  
Sbjct: 449 DNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG 508

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I       R+ +A + ++QM+++G+Q + V+YN+++  YCK+G +  A  +
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADI 568

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M   GFE D  T+  LI+GLCKA   + A   L  M   G     +AYN ++  L +
Sbjct: 569 LQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFR 628

Query: 370 DGKIDHAINVFESM-EV---KDSFTYSSMVHNLCKA 401
                 A+++F  M EV    D+FTY  +   LC+ 
Sbjct: 629 GNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRG 664



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 219/482 (45%), Gaps = 40/482 (8%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           MFG + +T + N  +    + ++++  E+   +    G+ PDVVT+N +IDA C+     
Sbjct: 154 MFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQAR 213

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +L  M    ++PD  T+ +L+ G      +  +L L   M EMG  P   + N L+
Sbjct: 214 TAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +LG+  +A    Q  I     P   TF+  +NGLC+N + D+AL++   + + G  
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNR------- 231
           P++ TY+ +I  LC  G L  A+ I+ ++ DSG  P+  T+ T I+  C  N+       
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 232 ---------------------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
                                         L + +   MK  G T D   Y  +I     
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G+L +A D +++M   G     V+YNT+I+  CK  ++E A  + D+M+  G   +  T
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAIT 513

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              LIDGLC A  I  A   ++ M   G   N   YN I+    K G I  A ++ ++M 
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
                 D  TY+++++ LCKA+R  +A KLL      G++    A   V+  L      R
Sbjct: 574 ANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGR 633

Query: 441 EA 442
           +A
Sbjct: 634 DA 635



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 191/392 (48%), Gaps = 7/392 (1%)

Query: 48  LIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
            I +Y +   FD  + ++ N++   G+  +   YN L+      S +        EM   
Sbjct: 131 FIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQ 190

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           GI PDV ++N+++  L +  +   A  + ++M   D+ P   TF  ++ G  +    + A
Sbjct: 191 GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAA 250

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMK 225
           LR+   + + G  P  VT N+LI G CK GR+  A  +I +E+ D G  P+ +T++T + 
Sbjct: 251 LRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD-GFEPDRVTFSTFVN 309

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +N      L++L  M ++G   D + Y TVI      G L+EA   + QMV  G   
Sbjct: 310 GLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP 369

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D  ++NTLI   C E +LE A  L  E+  +G   + YT  ILI+ LCK G+   A    
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLF 429

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 401
           E M   G   +   YN ++D L   GK+  A+++ + MEV    + + TY++++  LCK 
Sbjct: 430 EEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +R+  A ++      +G+         ++DGL
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 1/211 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  R+E+AE +       G+  + +T+N LID  C     D    ++
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M   G+ P+ VTYNS++    +   +S + D+L  M   G   DV +Y +L++ L + 
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKA 594

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +   A ++ + M    + P    +N ++  L +     +AL +FR + + G  P+  TY
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTY 654

Query: 186 NILIKGLCK-AGRLRTARWILKELGDSGHAP 215
            I+ +GLC+  G ++ A   L E+ D+G  P
Sbjct: 655 KIVFRGLCRGGGPIKEAFDFLVEMADNGFIP 685


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 221/406 (54%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   ++++A  +  + ++ G  P+V++Y  +I+  C+  +      +  +M 
Sbjct: 166 FNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKME 225

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  P+VVTY+++I    ++ L++ +++ L EM+E GIPP+V++YNS++H    LG+ +
Sbjct: 226 QNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLN 285

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA R+F++M+  D+ P T TF I+++GLCK      A  +F  + + G  P++ TYN L+
Sbjct: 286 EATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALM 345

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A+ + + +   G AP A +Y  ++    ++R+      +L+ M  K   
Sbjct: 346 DGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALN 405

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T++    ++GR KEA +  ++M + G   ++V+Y  L++ +CK G L+ A  L
Sbjct: 406 PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKL 465

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M+++  E +   +TILI+G+  AG ++ A+     +   G   ++  Y  ++  L K
Sbjct: 466 LKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +G  D A ++F  ME    + +S +Y+ M+    + +   +A +L+
Sbjct: 526 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 571



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 4/417 (0%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V  +V + N+LI+  C+    D   ++L +M + GI PD +T+N+LI G      +  ++
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           +L +EM++ G  P+V SY ++++ L + G    A  VF+ M      P   T++ +++ L
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+R  ++A+     + + G  P + TYN ++ G C  G+L  A  + KE+      PN 
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +T+T ++    +         +   M  KG   D   Y  ++  +     + EA    E 
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+  G      SYN LIN YCK  +++ A  LL EM  +    D  T++ L+ GLC+ G 
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
            K A    + M   G   NL  Y  ++D   K G +D A+ + +SM+ K    +   Y+ 
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++  +  A +L  A +L       G R        ++ GL   G   EA  +  K+ 
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 193/395 (48%), Gaps = 4/395 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C+ N ++ + +++    +LG+ PD +T+N LI+  C          + N M 
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  P+V++Y ++I G  +    S ++D+  +M + G  P+V +Y++++  L +    +
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A     +M+   + P   T+N +++G C     + A R+F+ +     +P  VT+ IL+
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G +  AR + + + + G  P+  TY  +M      R      ++   M RKG  
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  +I  + K  R+ EA   + +M    +  D V+Y+TL+   C+ G+ + A  L
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM   G   +  T+ IL+DG CK G++  A   L+ M +   + N+  Y  +++ +  
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
            GK++ A  +F  +       D  TY+ M+  L K
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 187/403 (46%), Gaps = 4/403 (0%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           V  D       RM      P VV +   +    +    S  + L ++M    +  +V+S 
Sbjct: 72  VCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSL 131

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++CL +L   D +  V   M    + P   TFN ++NGLC       A+ +F  + K
Sbjct: 132 NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK 191

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G  P +++Y  +I GLCK G    A  + K++  +G  PN +TY+TI+    ++R    
Sbjct: 192 RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVND 251

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            +E LS M  +G   + F Y +++  F  +G+L EAT   ++MV   V  + V++  L++
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD 311

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CKEG +  A L+ + M ++G E D  T+  L+DG C    +  A+   E M + G   
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
              +YN +++   K  ++D A ++   M  K    D+ TYS+++  LC+  R   A  L 
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                 G          ++DG    G   EA K+   ++  K+
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 178/362 (49%), Gaps = 4/362 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK   +  A   + + +  G+ P+V TYN ++  +C     +    +   M    + P
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           + VT+  L+ G  +  ++S +  + + M E G+ PD+ +YN+LM  +CL +L   +EA +
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM--NEAKK 359

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF+ MI     P   ++NI++NG CK+R  D A  +   +      P+ VTY+ L++GLC
Sbjct: 360 VFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 419

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           + GR + A  + KE+   G  PN +TY  ++    ++      L++L +MK K    +  
Sbjct: 420 QLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIV 479

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I      G+L+ A +   ++  DG + DI +Y  +I    KEG  + AY L  +M
Sbjct: 480 HYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM 539

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E  GF  +  ++ ++I G  +  +   A   ++ M    F  NL  +  ++D   +D  I
Sbjct: 540 EDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEII 599

Query: 374 DH 375
             
Sbjct: 600 SQ 601



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 155/320 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FC   +L +A  +  + +   V+P+ VT+ +L+D  C+         +   M E
Sbjct: 272 NSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTE 331

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+ TYN+L+ G     L++ +  + + M+  G  P   SYN L++   +  + DE
Sbjct: 332 KGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDE 391

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M    L P T T++ ++ GLC+      AL +F+ +  +G  P LVTY IL+ 
Sbjct: 392 AKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLD 451

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G L  A  +LK + +    PN + YT +++  F   K ++  E+ S +   G   
Sbjct: 452 GFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRP 511

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I   +K G   EA D   +M  DG   +  SYN +I  + +      A  L+
Sbjct: 512 DIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 571

Query: 311 DEMEKQGFECDKYTHTILID 330
           DEM  + F  +  T  +L+D
Sbjct: 572 DEMVGKRFSVNLSTFQMLLD 591


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 213/416 (51%), Gaps = 4/416 (0%)

Query: 39   LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
            +P +V +  ++ A  +   FD    + ++M   GIS D+ ++  LI    R S  S +L 
Sbjct: 612  IPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALA 671

Query: 99   LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            LL +M+++G  P + +  SL++   Q  +  EA  +   M    L P    +N ++NGLC
Sbjct: 672  LLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLC 731

Query: 159  KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            KNR  +NAL +F G++K G V + VTYN LI GLC +GR   A  +L+++      PN I
Sbjct: 732  KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI 791

Query: 219  TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
             +T ++    +         +   M R+    +   Y ++I  F   GRL +A    + M
Sbjct: 792  FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851

Query: 279  VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
            V+ G   D+V+YNTLI  +CK  ++E    L  EM  QG   D +T+  LI G C+AG +
Sbjct: 852  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911

Query: 339  KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
              A+     M   G   ++  YN ++D L  +GKI+ A+ + E ++      D  TY+ +
Sbjct: 912  NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971

Query: 395  VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +  +C+  ++  A  L  S  + GV++   A   ++ GL  +G RREA K+ ++++
Sbjct: 972  IQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 202/388 (52%), Gaps = 1/388 (0%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
              I +  FC+ +R   A A++   ++LG  P +VT   L++ +CQ   F    ++++ M 
Sbjct: 653  FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            E G+ P+VV YN++I G  +N  L+ +L++   M + GI  D  +YN+L+  L   G+  
Sbjct: 713  ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            +A R+ +DM+   + P    F  +++   K      A  +++ + +    P ++TYN LI
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 190  KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             G C  GRL  A+ +   +   G  P+ +TY T++    ++++ + G+++   M  +G  
Sbjct: 833  NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 250  FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
             D F Y T+I  + + G+L  A     +MV  GV  DIV+YN L++  C  GK+E A ++
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVM 952

Query: 310  LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +++++K   + D  T+ I+I G+C+   +K A      + + G   +  AY  ++  L +
Sbjct: 953  VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012

Query: 370  DGKIDHAINVFESMEVKDSFTYSSMVHN 397
            +G    A  +   M+ +D F  S  +++
Sbjct: 1013 NGLRREADKLCTRMK-EDGFMPSERIYD 1039



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 196/381 (51%), Gaps = 11/381 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC+ +RL  A +I+   ++LG  P +VT+  L+  +C        ++++  M 
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKP 128
           ++G  P+VV YN+LI    +N  ++ +L+LL+EM + G +  D+ +YN+L+  L   G+ 
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A R+ +DM    + P   TF  +++   K    D A  +++ + +    P  VTYN L
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC  GRL  A+     +   G  PN +TY T++    ++R+ + G+++   M R+G 
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D F Y T+I  + ++G+L+ A D    MV+ GV  DI+++  L++  C  G++ +A +
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-----RLHLEYMNKIGFDSNLEAYNCI 363
             ++M           + I+I GLCKA  ++ A     RL +E     G   +   Y  +
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVE-----GVKPDARTYTIM 457

Query: 364 VDRLGKDGKIDHAINVFESME 384
           +  L K+G    A  +F  M+
Sbjct: 458 ILGLCKNGPRREADELFRRMK 478



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 208/439 (47%), Gaps = 5/439 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F  + R E A  + ++ ++   LP VV +  L+ A      ++       +M   GIS D
Sbjct: 40  FLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHD 99

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++  LI    R S LS +L +L +M+++G  P + ++ SL+H      +  +A  +  
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKA 195
            M+     P    +N +++ LCKN   + AL +   ++K G    +LVTYN L+ GLC +
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G  R A  IL+++      P+  T+T ++    +        E+   M +     +   Y
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I      GRL  A    + M + G   ++V+YNTLIN +CK  ++E    L   M +
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D +T+  LI G C+ G ++ A+    +M   G   ++  +  ++  L  +G+I  
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399

Query: 376 AINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+  F  M   + +     Y+ M+H LCKA ++  A +L       GV+        ++ 
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459

Query: 432 GLRHSGCRREAKKIQSKIR 450
           GL  +G RREA ++  +++
Sbjct: 460 GLCKNGPRREADELFRRMK 478



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 161/346 (46%), Gaps = 48/346 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
           FC  NR+  A +++   ++ G  P+VV YN LID  C+    +    +LN M + G ++ 
Sbjct: 145 FCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAA 204

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D+VTYN+L+ G   +     +  +L +M +  I PDV+++ +L+    + G  DEA  ++
Sbjct: 205 DLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELY 264

Query: 136 QDMICGDLTPCTATFNIMLNGLC-----------------------------------KN 160
           + M+   + P T T+N ++NGLC                                   K+
Sbjct: 265 KQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKS 324

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           R  ++ +++F+ + + G V +  TYN LI G C+ G+LR A+ I   +   G  P+ IT+
Sbjct: 325 RRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITH 384

Query: 221 TTIMKCCFRNRKYKLGLEILSAM-----KRKGYTFDGF-GYCTVIAAFVKIGRLKEATDY 274
             ++     N       EI SAM      R G  + G   Y  +I    K  +++EA + 
Sbjct: 385 CILLHGLCVNG------EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWEL 438

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
             ++  +GV+ D  +Y  +I   CK G    A  L   M++ G  C
Sbjct: 439 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIIC 484



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 207/512 (40%), Gaps = 63/512 (12%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   C   RL  A+         G  P+VVTYN LI+ +C+    + G  + 
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            RM   G+  D  TYN+LI G  +   L  + D+   M+  G+ PD+ ++  L+H L   
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A   F DM  G+       +NIM++GLCK    + A  +F  L   G  P+  TY
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 186 NILIKGLCKAGRLRTARWILKEL--------GDSGH-----APNAITYTTIMKCCFRNRK 232
            I+I GLCK G  R A  + + +         + GH       N ++  TI+ C  R R 
Sbjct: 455 TIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRS 514

Query: 233 YK------------------LGL-EILSAMKRKGY-----------------TFDGFG-- 254
                               +GL  I S+   KG+                 +F G    
Sbjct: 515 IMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHH 574

Query: 255 --------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                   Y   + + +   +  +A     +M+       IV +  ++    K  K +  
Sbjct: 575 HHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIV 634

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  +ME  G   D Y+ TILI   C+      A   L  M K+GF  ++     +++ 
Sbjct: 635 IYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNG 694

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             +  +   A+++ +SM       +   Y+++++ LCK + L +A ++     K G+   
Sbjct: 695 FCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVAD 754

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                 ++ GL +SG   +A ++   +   KI
Sbjct: 755 AVTYNTLISGLCNSGRWTDAARLLRDMVKRKI 786



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 4/227 (1%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            FC   RL  A+ +    +  G  PDVVTYN LI  +C+    + G  +   M   G+  D
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              TYN+LI G  +   L+ +  + + M++ G+PPD+ +YN L+ CL   GK ++A  + +
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            D+    +     T+NI++ G+C+N     A  +FR L + G   + + Y  +I GLC+ G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 197  RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
              R A  +   + + G  P+   Y   +    R+    L  E++ A+
Sbjct: 1015 LRREADKLCTRMKEDGFMPSERIYDETL----RDHYTSLSAELIKAV 1057



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 2/283 (0%)

Query: 3   GKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           G+L+  L+  N  +   C +    +A  I+ D  +  + PDV T+  LIDA+ +  + D 
Sbjct: 200 GRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDE 259

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +  +M ++ I P+ VTYNSLI G   +  L  +    D M   G  P+V +YN+L++
Sbjct: 260 AQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLIN 319

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +  + ++  ++FQ M    L   T T+N +++G C+      A  +F  +   G  P
Sbjct: 320 GFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +++T+ IL+ GLC  G + +A     ++         + Y  ++    +  K +   E+ 
Sbjct: 380 DIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELF 439

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
             +  +G   D   Y  +I    K G  +EA +   +M  DG+
Sbjct: 440 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 5/259 (1%)

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   + R   A  +  E+  S   P+ + +T ++      R+Y+  +     M+  G + 
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + +  +I  F +  RL  A   + +M+  G    IV++ +L++ +C   ++  A+ L+
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRLGK 369
             M K G+E +   +  LID LCK G++  A   L  M K G   ++L  YN ++  L  
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+   A  +   M  +    D FT+++++    K   L  A +L    L+S +      
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 426 QKAVVDGLRHSGCRREAKK 444
             ++++GL   G    AKK
Sbjct: 279 YNSLINGLCMHGRLYHAKK 297


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 207/396 (52%), Gaps = 4/396 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           + + V  FCK  R+E+A   +++    G  PD VT+N L++ +C+  + +    I++ M 
Sbjct: 231 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 290

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PDV TYNSLI+G  +      ++++L +M+     P+  +YN+L+  L +  + +
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIE 350

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + ++   L P   TFN ++ GLC ++  D A+ MF  ++  G  P+  TY+ILI
Sbjct: 351 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 410

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC   RL+ A  +LKE+  SG A NA+ Y T++    ++R+ +   EI   M+  G +
Sbjct: 411 DSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVS 470

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y T+I    K  R++EA+  M+QM+ +G++ D  +YN+L+  +C+ G +E A  +
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDI 530

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +  M   G E D +T+  LI GLC+AG +  A   L  +   G      AYN ++  L  
Sbjct: 531 VQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFM 590

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             +    + +F  M  K    D+ T+  +   LC  
Sbjct: 591 RKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNG 626



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 217/469 (46%), Gaps = 39/469 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  T   NI +    + N+L+  E +    +  G++ DV T+N+LI A C+         
Sbjct: 120 KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAIL 179

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+ PD +T+ +L+ G      L+ +L +  +ML  G      S   L++   
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ +EA R   ++     +P   TFN ++NG C+    ++AL +   + + GF P++ 
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK------------------ 225
           TYN LI G+CK G    A  IL+++     +PN +TY T++                   
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 226 ---------CCFR--------NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                    C F         ++   + +E+   MK KG   D F Y  +I +     RL
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           KEA   +++M + G   + V YNTLI+  CK  ++E A  + D+ME  G      T+  L
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           IDGLCK   ++ A   ++ M   G   +   YN ++    + G I+ A ++ ++M     
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             D FTY +++  LC+A R+  ASKLL S    G+ +   A   V+  L
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 41/423 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P+  T+  LI ++  F   +    IL    E G  PD   YN  +     ++ L   
Sbjct: 85  GSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNKLKLV 142

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L  +M+  GI  DV ++N L+  L +  +   A  + ++M    L P   TF  ++ G
Sbjct: 143 EMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQG 202

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             +    + AL+M + +  +G +   V+  +L+ G CK GR+  A   + E+ + G +P+
Sbjct: 203 FIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPD 262

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+ +++    R       L+I+  M  KG+  D + Y ++I+   K+G  ++A + ++
Sbjct: 263 QVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ 322

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL--------------------------- 309
           QM+      + V+YNTLI+  CKE ++EAA  L                           
Sbjct: 323 QMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSK 382

Query: 310 --------LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
                    +EM+ +G + D++T++ILID LC    +K A + L+ M   G   N   YN
Sbjct: 383 NQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYN 442

Query: 362 CIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D L K  +I+ A  +F+ ME+    + S TY++++  LCK KR+  AS+L+   +  
Sbjct: 443 TLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME 502

Query: 418 GVR 420
           G++
Sbjct: 503 GLK 505



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 195/446 (43%), Gaps = 84/446 (18%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           Q  SFD+  T+L +++ +G  P+  T+ +LI   T    +   L +L+   E+G  PD  
Sbjct: 67  QSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPD-- 122

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
                                            T  +NI LN L +    DN L++   L
Sbjct: 123 ---------------------------------TNFYNIALNALVE----DNKLKLVEML 145

Query: 174 QK----HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
                  G V ++ T+N+LIK LCKA +LR A  +L+E+ + G  P+ IT+TT+M+    
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
                  L++   M   G          ++  F K GR++EA  ++ ++  +G   D V+
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           +N+L+N +C+ G +  A  ++D M ++GF+ D YT+  LI G+CK G  + A   L+ M 
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKI-----------------------------------D 374
                 N   YN ++  L K+ +I                                   D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+ +FE M+ K    D FTYS ++ +LC  +RL  A  LL     SG          ++
Sbjct: 386 IAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445

Query: 431 DGLRHSGCRREAKKIQSKIRMAKISH 456
           DGL  S    +A++I  ++ +  +S 
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSR 471



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK    EKA  I+   I     P+ VTYN LI A C+    +A   +   +  
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDV T+N+LI G   +     ++++ +EM   G  PD ++Y+ L+  L    +  E
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 421

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M           +N +++GLCK+R  ++A  +F  ++  G     VTYN LI 
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  R+  A  ++ ++   G  P+  TY +++    R    +   +I+  M   G   
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T+I    + GR+  A+  +  +   G+ L   +YN +I       + +    L 
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAG 336
            EM ++    D  TH I+  GLC  G
Sbjct: 602 REMMEKSDPPDALTHKIVFRGLCNGG 627



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 1/324 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK N +E A  +    +  G+LPDV T+N LI   C   + D    +   M+ 
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN 396

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TY+ LI        L  +L LL EM   G   +   YN+L+  L +  + ++
Sbjct: 397 KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED 456

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    ++  + T+N +++GLCKN+  + A ++   +   G  P+  TYN L+ 
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ G +  A  I++ +  +G  P+  TY T++    R  +  +  ++L +++ KG   
Sbjct: 517 YFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVL 576

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-EGKLEAAYLL 309
               Y  VI A     R KE      +M+      D +++  +    C   G ++ A   
Sbjct: 577 TPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDF 636

Query: 310 LDEMEKQGFECDKYTHTILIDGLC 333
             EM ++G   +  +   L +GLC
Sbjct: 637 TVEMLEKGILPEFPSFGFLAEGLC 660



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 41/263 (15%)

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+  L ++    +   +LK+L  SG  PNA T+ T+++      + +  L+IL      G
Sbjct: 61  LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELG 118

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D   Y   + A V+  +LK       +MV +G+ LD+ ++N LI   CK  +L  A 
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178

Query: 308 LLLDEMEKQGFECDKYTHT-----------------------------------ILIDGL 332
           L+L+EM   G + D+ T T                                   +L++G 
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGF 238

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G ++ A   +  +++ GF  +   +N +V+   + G ++ A+++ + M  K    D 
Sbjct: 239 CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298

Query: 389 FTYSSMVHNLCKAKRLPSASKLL 411
           +TY+S++  +CK      A ++L
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEIL 321


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 186/365 (50%), Gaps = 3/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            NI V   CK  +L +A  +I D    GV P+V+TYN LID YC+       Y    IL 
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   GI P+ VTYN LI G  ++  +S ++ +  EM   G+ P+V +YN L++ L   G
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K DEA  +   M+  DL P   T N+++NG CKN+  + A+ +F  ++K G  P  +TY 
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI   CK GR+  A  +   + D G  P   TY  ++    R    K    +++ M  K
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
             + D   Y  +I +  K G  ++A   +++M   G+    V+YNTL++ YC+EG L AA
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA 457

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            ++   ME++G + +  TH +LI G C  G ++ A   L  M + G   N   Y  I + 
Sbjct: 458 LIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEE 517

Query: 367 LGKDG 371
           + + G
Sbjct: 518 MMEKG 522



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 200/363 (55%), Gaps = 7/363 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           +   M +  I  +V+++N ++ G  +   L+ + D++++M   G+ P+V +YN+L+  +C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 122 -LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            + ++GK  +A+ + ++M+   + P   T+NI+++G CK+     A+R+F  +Q+ G  P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTYNILI GLC  G++  A  +  ++  S   PN +T+  ++    +N+     + + 
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M+++G   +   Y T+I A+ K GR+++A      M+  G+  ++ +YN LI   C++
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G ++AA  L++EM  +    D  T+ ILID LCK G  + A   L+ M + G + +   Y
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++D   ++G +  A+ V   ME K    +  T++ ++   C   RL  A+ LL   L+
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501

Query: 417 SGV 419
            G+
Sbjct: 502 RGL 504



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 190/409 (46%), Gaps = 12/409 (2%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIA-----GATRNSLLSCSLDLLDEMLEMGI 108
           +FV ++  Y++        +S D    NS++A        RN  +    +      + G 
Sbjct: 57  KFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGF 116

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
              + S N L+  L +  +  +   V+++MI   +     +FNI++NGLCK    + A  
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGD 176

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGR---LRTARWILKELGDSGHAPNAITYTTIMK 225
           +   ++  G  P ++TYN LI G CK GR   +  A  ILKE+   G  PN +TY  ++ 
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              ++      + +   M+R+G   +   Y  +I      G++ EA    +QMV+  ++ 
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           ++V++N LIN +CK   +  A  L ++MEKQG + +  T+T LID  CK G ++ A    
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             M   G    +  YNC++  L + G +  A ++   M  K    D  TY+ ++ +LCK 
Sbjct: 357 NMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKK 416

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                A KLL    + G+         ++DG    G  R A  +++++ 
Sbjct: 417 GESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 151/309 (48%), Gaps = 36/309 (11%)

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N +L+GL K     +   ++R + K      ++++NI++ GLCK G+L  A  +++++  
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G +PN ITY T++                             GYC +     +IG++ +
Sbjct: 184 WGVSPNVITYNTLID----------------------------GYCKM----GRIGKMYK 211

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +++MV  G+  + V+YN LI+ +CK+  +  A  +  EM++QG   +  T+ ILI+
Sbjct: 212 ADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILIN 271

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLC  G +  A    + M     + N+  +N +++   K+  ++ AIN+F  ME +    
Sbjct: 272 GLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           ++ TY++++   CK  R+  A  L    +  G+    S    ++ GL   G  + A+ + 
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391

Query: 447 SKIRMAKIS 455
           +++   K+S
Sbjct: 392 NEMVSKKLS 400


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 218/415 (52%), Gaps = 5/415 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN +I  +C+    ++  T+L+RM+  G SPDVVT+N +I        +  +L +
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 100 LDEML-EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            +E+L +    P + +Y  L+      G  DEA ++  +M+   L P T T+N++  GLC
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    D A    R L   G  P+++TYNIL++ L   G+       + E+   G  PN +
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+ ++    R+ K +  + ++  MK KG T D + Y  +IAAF + G+L  A ++++ M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           + DG   DIV+YNT++   CK G  + A  +  ++++ G   +  ++  ++  L  +G+ 
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSM 394
             A   +  M   G D ++  YN ++  L +DG +D AI +   M       +  +Y ++
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +  LCKA R+  A ++L + +++G +  ++    +++G+  SG R +A ++ + +
Sbjct: 402 LLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 36/428 (8%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNM--------------- 47
           GK      N  +  FCKANR+E A+ ++    R G  PDVVT+N+               
Sbjct: 40  GKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLAL 99

Query: 48  ---------------------LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG 86
                                LI+AY      D    +L+ M   G+ PD  TYN +  G
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRG 159

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
             +   +  + + +  +   G  PDV +YN L+  L   GK DE  +   ++      P 
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
             T++I+++ LC++   + ++ + + +++ G  P+   Y+ LI   C+ G+L  A   L 
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +   G  P+ + Y TIM    +N      +EI   +   G   +   Y T+++A    G
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
               A   + QM++ G+  D+++YN+LI+  C++G ++ A  LL +M    F+ +  ++ 
Sbjct: 340 DRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYK 399

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            ++ GLCKA  I  A   L  M + G   N   Y  +++ +G  G    A+ +  S+ + 
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIM 459

Query: 387 DSFTYSSM 394
           ++ +  S 
Sbjct: 460 NAISEDSF 467



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 137/279 (49%), Gaps = 6/279 (2%)

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+  D  P       ++ G   +R  D A R+   L+KHG  P++  YN +I G CKA R
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA-MKRKGYTFDGFGYC 256
           + +A+ +L  +   G +P+ +T+  ++       K  L L++    +K          Y 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A++  G + EA   +++M++ G++ D  +YN +    CKEGK++ A+  +  +  +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + D  T+ IL+  L   G        +  +   G + N+  Y+ ++  L +DGKI+ +
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +N+ + M+ K    D++ Y  ++   C+  +L  A + L
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFL 278


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 221/423 (52%), Gaps = 7/423 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN LI  + +    +    +L+RM+  G  PDVVTYN +I        L  +L++
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +E+L+    P V +Y  L+      G  D A ++  +M+   L P T T+N ++ G+CK
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A  + R L   G  P+++TYNIL++ L   G+      ++ E+   G  PN +T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           ++ ++    R+ K +  + +L +MK KG   D + Y  +IA F + GRL  AT+++E M+
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           +DG   DIV+YNT++   C+ GK + A  + +++++ G   +  ++  L   L  +G+  
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSM 394
           +   + L+ +N+ G D +   YN ++  L +DG +D AI +   M+      +  +Y+ +
Sbjct: 436 RALEMILKLLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNII 494

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR-MAK 453
           +  LCK  R   A ++L +  + G +  ++    +++G+  SG R EA ++ + +  M  
Sbjct: 495 LLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNA 554

Query: 454 ISH 456
           IS 
Sbjct: 555 ISE 557



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 194/427 (45%), Gaps = 35/427 (8%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           +GK      N  +  F KAN+LE A  ++      G LPDVVTYN++I ++C     D  
Sbjct: 133 YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192

Query: 62  ------------------YTIL-----------------NRMREAGISPDVVTYNSLIAG 86
                             YTIL                 + M   G+ PD +TYN++I G
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
             +  ++  + +LL  +   G  PD+ +YN L+  L   GK  E  ++  +MI     P 
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
             T +I++  LC++   + A+ + R +++ G  P+   Y+ LI G C+ GRL  A   L+
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +   G  P+ + Y TIM    R  K    LE+   +   G   +   Y T+ +A    G
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
               A + + +++  G+  D ++YN+LI+  C++G ++ A  LL +M+   +  +  ++ 
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYN 492

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           I++ GLCK      A   L  M + G   N   Y  +++ +G  G    A+ +  S+   
Sbjct: 493 IILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGM 552

Query: 387 DSFTYSS 393
           ++ +  S
Sbjct: 553 NAISEDS 559



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 38/335 (11%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------------- 183
           +LN  C+    + +L     +   G+ P+++                             
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 184 -----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                 YN LI G  KA +L  A  +L  +   G  P+ +TY  ++       K  L LE
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           I   + +         Y  +I A +  G +  A   +++M++ G++ D ++YN +I   C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KE  ++ A+ LL  +  +G + D  T+ IL+  L   G        +  M  IG   N+ 
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            ++ ++  L +DGK++ A+N+  SM+ K    D++ Y  ++   C+  RL  A++ L   
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +  G          ++ GL  +G   +A ++  K+
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKL 409


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 225/446 (50%), Gaps = 19/446 (4%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I V   C+A ++++A+ +    I  G   + V YN LI+  C+  + +  Y +L  M   
Sbjct: 50  IIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 109

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  PD +TYN++++G  R   +S +    D M   G  PDV +YN L+  L++ GK  EA
Sbjct: 110 GYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEA 169

Query: 132 NRVFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
             +F+ M   D  + P   T+N +++G C+   TD A+++F+ +   G++P+ VTYN ++
Sbjct: 170 WGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL 229

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL +   +  A  + K++ DSG APN  TY+ ++    R       LE+   M  K ++
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D      VI    K  ++ +A   +E+M   G   D+V+YN L++  CK   ++ A+ L
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M   G   D  +++++++GLCK   +  AR+  + M +     ++  +N ++D L K
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK+D A ++ + M     + D  T ++++H LC+ KR   A +L    ++ G       
Sbjct: 410 AGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGT------ 463

Query: 426 QKAVVDGLRH----SGCRREAKKIQS 447
              V D L H    +G  RE K  Q+
Sbjct: 464 ---VADVLPHNIVLAGLCREGKLAQA 486



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 214/448 (47%), Gaps = 8/448 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+  ++ +A+         G  PDVV YN L+DA  +       + +   M  
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 71  AG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           A   ++PD++TYN+LI G  R      ++ L  +++  G  PD  +YNS++  L +    
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  +F+ M+     P  AT++I+L+G C+       L ++  + +  F P+++  N +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LCKA ++  A  +L+E+   G  P+ +TY  ++    +        E+ S M   G 
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  V+    K  ++ +A    ++M+   +  D+V++N L++  CK GKL+ A  
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LLD M +     D  T T L+ GLC+      A    +YM + G  +++  +N ++  L 
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478

Query: 369 KDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           ++GK+  A+  F+SM   D        TY+++V+ L +A R+  A         SG    
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             A   +++GLR  G   +A ++   ++
Sbjct: 539 YVAYNTLMNGLRKQGRHIQADRLTQAMK 566



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 189/372 (50%), Gaps = 6/372 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E G  PDVVTY+++I+G  +   ++ +L++++EM E G+ PDV +Y  ++  L + GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA+ +F  MI    +  T  +N ++NGLCK+   + A ++   +   G+ P+ +TYN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY--KLGLEILSAMKR 245
           ++ GLC+ G++  A+     +   G++P+ + Y  ++   ++  K     GL     M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +    D   Y T+I  F ++ +  EA    + ++  G   D V+YN+++    ++  ++ 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +  +M   G   +  T++I++ G C+ GN+       E M +  F  ++   N ++D
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L K  K+D A  V E M     V D  TY+ ++  LCK   +  A +L  + + +G   
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 422 LKSAQKAVVDGL 433
              +   V++GL
Sbjct: 361 DIVSYSVVLNGL 372



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 189/378 (50%), Gaps = 2/378 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+  + ++A  +  D I  G +PD VTYN ++    +  + D    +  +M +
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G +P+  TY+ +++G  R   ++  L+L +EM E    PDV   N+++  L +  K D+
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A++V ++M      P   T+NI+L+GLCK    D A  +F  +  +G  P++V+Y++++ 
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  ++  AR +   + +    P+ +T+  +M    +  K     ++L  M       
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           DG    T++    +  R  EA    + MV  G   D++ +N ++   C+EGKL  A L  
Sbjct: 431 DGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFF 490

Query: 311 DEMEKQG--FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             M K    F  D  T+T L++ L +AG +  A  + + M   G   +  AYN +++ L 
Sbjct: 491 KSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLR 550

Query: 369 KDGKIDHAINVFESMEVK 386
           K G+   A  + ++M+ K
Sbjct: 551 KQGRHIQADRLTQAMKEK 568



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 196/398 (49%), Gaps = 15/398 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PD++TYN LID +C+    D    +   +   G  PD VTYNS++ G  R S +  + 
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++  +M++ G  P+  +Y+ ++    ++G       ++++M     +P     N +++ L
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK +  D+A ++   + K G VP++VTYNIL+ GLCK   +  A  +   + D+G AP+ 
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           ++Y+ ++    +  K      +   M  +    D   +  ++    K G+L EA D ++ 
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M    V  D V+  TL++  C++ + + A  L   M ++G   D   H I++ GLC+ G 
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482

Query: 338 IKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           +  A L  + M K    F  ++  Y  +V+ L + G++D A++ F+ M       D   Y
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAY 542

Query: 392 SSMVHNLCK------AKRLPSASK---LLLSCLKSGVR 420
           +++++ L K      A RL  A K    L  C K+ +R
Sbjct: 543 NTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFKAPLR 580



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 165/315 (52%), Gaps = 37/315 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  +   CKA +++ A  ++ +  ++G +PDVVTYN+L+D  C+    D  + + + M
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G +PD+V+Y+ ++ G  + + +  +  L D M+E  + PDV ++N LM  L + GK 
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  +   M   ++ P   T   +++GLC+++ TD A+R+F+ + + G V +++ +NI+
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIV 473

Query: 189 IKGLCKAGRLRTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           + GLC+ G+L  A    K +   D   +P+ +TYTT+                       
Sbjct: 474 LAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTL----------------------- 510

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                       + A ++ GR+ +A DY +QM   G   D V+YNTL+N   K+G+   A
Sbjct: 511 ------------VNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQA 558

Query: 307 YLLLDEMEKQGFECD 321
             L   M+++GF  D
Sbjct: 559 DRLTQAMKEKGFLSD 573



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 127/248 (51%), Gaps = 6/248 (2%)

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + + G  P+ +TY+TI+    +  K    LE++  M  KG   D   Y  ++    + G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + EA +   +M+  G   + V+YN LIN  CK+  +E AY LL+EM  +G+E D  T+  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
           ++ GLC+ G +  A+   + M   G+  ++ AYN ++D L K+GK+  A  +F++M++ D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 388 S------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
                   TY++++   C+ ++   A KL    +  G         +++ GL       E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 442 AKKIQSKI 449
           A+++  K+
Sbjct: 241 AEEMFKKM 248



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 4/179 (2%)

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G + D+V+Y+T+I+  CK GK+  A  +++EM ++G   D  T+TI++D LC+AG 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
           +  A      M + G  +N  AYN +++ L KD  I+ A  + E M  K    D+ TY++
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++  LC+  ++  A +   S    G      A   ++D L   G   EA  +   + MA
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 194/373 (52%), Gaps = 3/373 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   +  A  I+ D +  G  PD  TY  L++ +CQ    D    +       G+ P 
Sbjct: 410 YCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPS 469

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++ YN+LI G  +  L+  +L L++EM E G  PD+W+YN +++ L ++G   +AN +  
Sbjct: 470 IIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIG 529

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D I     P   T+N +++G C+    D+A+ +   +   G  P+++TYN L+ GLCK  
Sbjct: 530 DAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTA 589

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +      I K + + G APN ITY TI++    ++K    +++L  MK KG T D   + 
Sbjct: 590 KSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFG 649

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           T+I  F K+G L  A      M     V     +YN +I+ + ++  ++ A  L  EM+K
Sbjct: 650 TLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK 709

Query: 316 QGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            G + D YT+ +LIDG CK GN+ +G +  LE + K GF  +L  +  +++ L  + K+ 
Sbjct: 710 NGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK-GFIPSLTTFGRVLNCLCVEHKVQ 768

Query: 375 HAINVFESMEVKD 387
            A+ +   M  KD
Sbjct: 769 EAVGIIHLMVQKD 781



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 201/414 (48%), Gaps = 5/414 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L++A  ++    R G+ PDVVTYN +I   C+          L++M 
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+  TYNS+I G  +  ++  +  +L + +  G  PD ++Y SL++   Q G PD
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  VF+D +   L P    +N ++ GLC+      AL++   + + G  P++ TYN++I
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G L  A  ++ +    G  P+  TY T++    R  K    +E+++ M  +G T
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T++    K  + +E  +  + M   G   +I++YNT+I   C   K+  A  L
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA-YNCIVDRLG 368
           L EM+ +G   D  +   LI G CK G++ GA      M K    S+  A YN I+    
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +   +  A+ +F  M+      D++TY  ++   CK   +    K LL  ++ G
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKG 746



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 201/418 (48%), Gaps = 39/418 (9%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY------------------- 80
           P V +YN +++   +F  F+  + +  RM++  +  DV TY                   
Sbjct: 188 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 247

Query: 81  --NSLIAGATRNSLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             N  + G   N++  C++              +L DEMLE  + PDV ++N L+H L +
Sbjct: 248 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 307

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   E+ R+F  ++   + P   TFNI + GLCK    D A+R+   + + G  P++VT
Sbjct: 308 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 367

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I GLC+  R+  A   L ++ + G  PN  TY +I+    +         IL    
Sbjct: 368 YNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAV 427

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG+  D F YC+++  F + G   +A    +  +  G++  I+ YNTLI   C++G + 
Sbjct: 428 FKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLIL 487

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L++EM ++G + D +T+ ++I+GLCK G +  A   +      G   ++  YN +V
Sbjct: 488 PALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLV 547

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D   +  K+D AI +   M  +    D  TY+++++ LCK  +     ++  +  + G
Sbjct: 548 DGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 194/435 (44%), Gaps = 39/435 (8%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +FC+  R   A  ++ +   LG   + V Y  ++  + +F   D    + + M E  + P
Sbjct: 234 SFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP 293

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV T+N L+    +   +  S  L D++L+ G+ P+++++N  +  L + G  D A R+ 
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +    L P   T+N ++ GLC+      A      +   GF P   TYN +I G CK 
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413

Query: 196 GRLRTARWILKEL----------------------GDSGHA-------------PNAITY 220
           G +  A  ILK+                       GD   A             P+ I Y
Sbjct: 414 GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVY 473

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T++K   +       L++++ M  KG   D + Y  +I    K+G L +A   +   +T
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   DI +YNTL++ YC++ KL++A  L++ M  QG   D  T+  L++GLCK    + 
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
                + M + G   N+  YN I++ L    K++ A+++   M+ K    D  ++ +++ 
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653

Query: 397 NLCKAKRLPSASKLL 411
             CK   L  A  L 
Sbjct: 654 GFCKVGDLDGAYGLF 668



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 4/316 (1%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA   F+ M   +  P   ++N ++N L +  Y + A +++  ++      ++ TY
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I IK  C+ GR   A  +L+ +   G   NA+ Y T++   +         E+   M  
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                D   +  ++ A  K G + E+    ++++  GV  ++ ++N  I   CKEG L+ 
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LL  + ++G   D  T+  +I GLC+   +  A   L  M   GF+ N   YN I+D
Sbjct: 349 AVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K G +  A  + +    K    D FTY S+V+  C+      A  +    L  G+R 
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468

Query: 422 LKSAQKAVVDGLRHSG 437
                  ++ GL   G
Sbjct: 469 SIIVYNTLIKGLCQQG 484



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 71/279 (25%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   L  A  +I D I  G +PD+ TYN L+D YC+ +  D+   ++NRM  
Sbjct: 509 NLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS 568

Query: 71  AGISPDVVTYNSLIAG--------------------------ATRNSLLSC--------- 95
            G++PDV+TYN+L+ G                           T N+++           
Sbjct: 569 QGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNE 628

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNI-- 152
           ++DLL EM   G+ PDV S+ +L+    ++G  D A  +F+ M    D++  TAT+NI  
Sbjct: 629 AVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIII 688

Query: 153 ---------------------------------MLNGLCKNRYTDNALRMFRGLQKHGFV 179
                                            +++G CK    +   +      + GF+
Sbjct: 689 SAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFI 748

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           P L T+  ++  LC   +++ A  I+  +      P+ +
Sbjct: 749 PSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 4/169 (2%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y   +  + + G+++EA D  E+M        + SYN ++N+  + G    A+ +   M+
Sbjct: 158 YVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMK 217

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +  E D YT+TI I   C+ G    A   L  M  +G  SN  AY  +V    + G  D
Sbjct: 218 DKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDND 277

Query: 375 HAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            A  +F+ M       D  T++ +VH LCK   +  + +L    LK GV
Sbjct: 278 RARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 49/107 (45%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +  F +   ++ A  +  +  + G  PD  TY +LID +C+  + + GY  L
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
               E G  P + T+  ++        +  ++ ++  M++  I PD 
Sbjct: 740 LENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 222/446 (49%), Gaps = 4/446 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    NI +   CK   LE A ++       G  PD+VTYN LID + +    D    
Sbjct: 252 KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECIC 311

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I  +M++A   PDV+TYN+LI    +   +  + + L EM   G+ P+V +Y++ +    
Sbjct: 312 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 371

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   EA + F DM    LTP   T+  +++  CK      AL++   + + G    +V
Sbjct: 372 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 431

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ GLC+ GR++ A  + + + ++G APN  TYT ++    + ++ +   +IL  M
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K K    D   Y T++       RL+EA   + ++   G+  + V Y TL++ Y K G+ 
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  LL+EM   G    + T+  LIDGLCK+G ++ A  H   M++IG   N+  Y  +
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           VD L K+   + A  +F+ M  K    D   Y++++    K   L  A  L    ++ G+
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
            +   A  A++ GL HSG  ++A+ +
Sbjct: 672 ELDLHAYTALIWGLSHSGQVQKARNL 697



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 191/373 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  R+ KA   + +    G+ P+VVTY+  IDA+C+             MR 
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ++P+  TY SLI    +   L+ +L L++E+L+ GI  +V +Y +L+  L + G+  E
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF+ M+   + P   T+  +++G  K +  + A  + + +++    P+L+ Y  ++ 
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 508

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   RL  A+ ++ E+ +SG   NA+ YTT+M   F++ +    L +L  M   G   
Sbjct: 509 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIA 568

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               YC +I    K G ++EA  +  +M   G+Q ++  Y  L++  CK    E A  L 
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   DK  +T LIDG  K GN++ A    + M +IG + +L AY  ++  L   
Sbjct: 629 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 688

Query: 371 GKIDHAINVFESM 383
           G++  A N+ + M
Sbjct: 689 GQVQKARNLLDEM 701



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 4/372 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +L  + +   +M +  + P   S N+L+H L ++G+ D + + 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DM    +     T+NIM++ LCK    + A  +F  +++ GF P++VTYN LI G  K
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G L     I +++ D+   P+ ITY  ++ C  +  +     E L  MK  G   +   
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T I AF K G L+EA  +   M    +  +  +Y +LI+  CK G L  A  L++E+ 
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G + +  T+T L+DGLC+ G +K A      M   G   N E Y  +V    K  +++
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           +A ++ + M+ K    D   Y +++  LC   RL  A  L+    +SG+         ++
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542

Query: 431 DGLRHSGCRREA 442
           D    SG   EA
Sbjct: 543 DAYFKSGQATEA 554



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 192/427 (44%), Gaps = 4/427 (0%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LE+A    +   +  V P   + N L+    +    D        M  AGI   V TYN 
Sbjct: 201 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 260

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           +I    +   L  +  L  +M E G  PD+ +YNSL+    +LG  DE   +F+ M   D
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   T+N ++N  CK      A      ++ +G  P +VTY+  I   CK G L+ A 
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
               ++      PN  TYT+++    +       L+++  + + G   +   Y  ++   
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            + GR+KEA +    M+  GV  +  +Y  L++ + K  ++E A  +L EM+++  + D 
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             +  ++ GLC    ++ A+L +  + + G ++N   Y  ++D   K G+   A+ + E 
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 383 M----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M     +    TY +++  LCK+  +  A        + G++   +   A+VDGL  + C
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 439 RREAKKI 445
              AKK+
Sbjct: 621 FEVAKKL 627



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 145/300 (48%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+  R+++AE +    +  GV P+  TY  L+  + +    +    IL  M+E  I PD+
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           + Y +++ G    S L  +  L+ E+ E GI  +   Y +LM   F+ G+  EA  + ++
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   L     T+  +++GLCK+     A+  F  + + G  P +  Y  L+ GLCK   
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
              A+ +  E+ D G  P+ I YT ++    ++   +  L +   M   G   D   Y  
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I      G++++A + +++M+  GV  D V Y  LI  Y   GK++ A  L +EM K+G
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 15/360 (4%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA  L +A  ++ + ++ G+  +VVTY  L+D  C+         +   M  AG++P+ 
Sbjct: 406 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 465

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            TY +L+ G  +   +  + D+L EM E  I PD+  Y +++  L    + +EA  +  +
Sbjct: 466 ETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE 525

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +    +      +  +++   K+     AL +   +   G +   VTY  LI GLCK+G 
Sbjct: 526 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGL 585

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           ++ A      + + G  PN   YT ++    +N  +++  ++   M  KG   D   Y  
Sbjct: 586 VQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 645

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I   +K G L+EA +  ++M+  G++LD+ +Y  LI      G+++ A  LLDEM  +G
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 705

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D+  +  LI      G +               D  LE  N +  R    G  DHA+
Sbjct: 706 VLPDEVVYMCLIKKYYALGKV---------------DEALELQNEMAKRGMITGLSDHAV 750



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 41/346 (11%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P    +++L   L +LG  +EA+  F  M    + P   + N +L+ L K    D + + 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F+ +   G    + TYNI+I  LCK G L  AR +  ++ ++G  P+ +TY +++     
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI----- 297

Query: 230 NRKYKLGLE-----ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           +   KLGL      I   MK      D   Y  +I  F K  R+ +A +++ +M  +G++
Sbjct: 298 DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            ++V+Y+T I+ +CKEG L+ A     +M +     +++T+T LID  CKAGN+  A   
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRL 404
           +E + + G   N+                                TY++++  LC+  R+
Sbjct: 418 VEEILQAGIKLNV-------------------------------VTYTALLDGLCEEGRM 446

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             A ++  + L +GV   +    A+V G   +     AK I  +++
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 5/209 (2%)

Query: 252 GFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           GFG +  + +A +++G L+EA++   +M    V     S N L++   K G+ + +    
Sbjct: 184 GFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF 243

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G +   +T+ I+ID LCK G+++ AR     M + GF  ++  YN ++D  GK 
Sbjct: 244 KDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKL 303

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D  I +FE M+      D  TY+++++  CK +R+P A + L     +G++      
Sbjct: 304 GLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              +D     G  +EA K    +R   ++
Sbjct: 364 STFIDAFCKEGMLQEAIKFFVDMRRVALT 392



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 4/195 (2%)

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K+GR   +  + + M   G++  + +YN +I+  CKEG LE A  L  +M++ GF  D  
Sbjct: 232 KVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV 291

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  LIDG  K G +       E M     D ++  YN +++   K  ++  A      M
Sbjct: 292 TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 351

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           +      +  TYS+ +   CK   L  A K  +   +  +   +    +++D    +G  
Sbjct: 352 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 411

Query: 440 REAKKIQSKIRMAKI 454
            EA K+  +I  A I
Sbjct: 412 AEALKLVEEILQAGI 426


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 220/434 (50%), Gaps = 1/434 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK + L++A  ++ D I  G +PD VTY  LI+  C     +    + N  + 
Sbjct: 223 NTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQA 282

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+V YNSL+ G  R  L+  +L +++EM+E G  PD+W+YN +++ L ++G   +
Sbjct: 283 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISD 342

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V  D I     P   TFN M++G CK    D+AL++   +  +G  P+ +TYN ++ 
Sbjct: 343 AAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLN 402

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG+ +      +E+   G  PNAITY  +++   +  + +    ++  M + G   
Sbjct: 403 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVP 462

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I  F + G L  A    +++   G      ++N LI  Y  +  ++ A  + 
Sbjct: 463 DTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIF 522

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G++ D YT+ +L+DG CKA N+  A +HL  M   GF  ++  +  +++ L  +
Sbjct: 523 GEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMN 582

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            ++  A+ +   M V+       +   L   K+  +A K+L+  L     I     + + 
Sbjct: 583 HRVSEAVAIIHIM-VRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYPTYEVLH 641

Query: 431 DGLRHSGCRREAKK 444
           +G+R +   R+A+K
Sbjct: 642 EGVRDNKLTRKARK 655



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 201/412 (48%), Gaps = 5/412 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  RLE+A A++ + +   + PDVVTYN L+   C+          L RM  
Sbjct: 154 NIWIRGLCEGGRLEEAVALV-ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMN 212

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TYN++I G  +  +L  + +LL + +  G  PD  +Y SL++ L   G  + 
Sbjct: 213 QGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVER 272

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +    DL P    +N ++ GLC+     +AL++   + + G  P++ TYNI+I 
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  A  ++ +    G+ P+  T+ T++    +  K    L+++  M   G   
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAP 392

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V+    K G+ KE  +  E+M+  G + + ++YN LI  +CK  +LE A  ++
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M + G   D  +   LI G C+ G++ GA L  + +++ G+ +  + +N ++      
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +  A  +F  M  K    D +TY  +V   CKA  +  A   L   +  G
Sbjct: 513 LNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKG 564



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 198/413 (47%), Gaps = 5/413 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G  P    YN ++DA       D  + +  RM  AG++PD  T+   I           
Sbjct: 4   FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L LL  + E G      +Y +++  L+  G   +A  +F +M+  D+ P  ATFN +L+
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC+      +  +   + K G      T NI I+GLC+ GRL  A  +++ + D+  AP
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAP 182

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY T+M+   ++ K +   + L  M  +G   D F Y T+I  + K   L+EAT+ +
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           +  +  G   D V+Y +LIN  C EG +E A  L +E + +  + D   +  L+ GLC+ 
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G I  A   +  M + G   ++  YN +++ L K G I  A  V     VK    D FT+
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           ++M+   CK  +L SA +L+      G+        +V++GL  +G  +E  +
Sbjct: 363 NTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 181/382 (47%), Gaps = 5/382 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R  V PDV T+N ++ A CQ         +L ++ + G+S +  T N  I G      L
Sbjct: 107 LRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRL 166

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++ L++ M +  I PDV +YN+LM  L +  K  EA +  + M+     P   T+N +
Sbjct: 167 EEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTI 225

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G CK      A  + +     GFVP+ VTY  LI GLC  G +  A  +  E      
Sbjct: 226 IDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDL 285

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ + Y +++K   R       L++++ M   G   D + Y  VI    K+G + +A  
Sbjct: 286 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAV 345

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            M   +  G   D+ ++NT+I+ YCK  KL++A  L++ M   G   D  T+  +++GLC
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           KAG  K      E M   G   N   YN +++   K  +++ A  V   M     V D+ 
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465

Query: 390 TYSSMVHNLCKAKRLPSASKLL 411
           ++++++H  C+   L  A  L 
Sbjct: 466 SFNTLIHGFCRNGDLDGAYLLF 487



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 199/401 (49%), Gaps = 5/401 (1%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           ++A  + +  +  GV PD  T+ + I ++C          +L  + E G     + Y ++
Sbjct: 27  DQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTV 86

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           + G   +     +  L DEML   + PDV ++N+++H L Q G   E+  +   ++   +
Sbjct: 87  VRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGM 146

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           +    T NI + GLC+    + A+ +   +  +   P++VTYN L++GLCK  +++ A  
Sbjct: 147 SVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQ 205

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
            L+ + + G  P+  TY TI+    +    +   E+L     KG+  D   YC++I    
Sbjct: 206 YLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLC 265

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
             G ++ A +   +     ++ D+V YN+L+   C++G +  A  +++EM + G   D +
Sbjct: 266 AEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIW 325

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+ I+I+GLCK GNI  A + +      G+  ++  +N ++D   K  K+D A+ + E M
Sbjct: 326 TYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERM 385

Query: 384 EV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            +     D+ TY+S+++ LCKA +    ++     +  G R
Sbjct: 386 WMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 215/446 (48%), Gaps = 37/446 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM- 68
            NI +   CKA++L  A  ++ D    G+ PD  T+  L+  + +    +    I   M 
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV 261

Query: 69  --------------------------------REAGISPDVVTYNSLIAGATRNSLLSCS 96
                                            E G  PD VT+N+L+ G  R   +   
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQG 321

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L+++D MLE G   DV++YNSL+  L +LG+ DEA  +   M+  D  P T T+N ++  
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK  + + A  + R L   G +P++ T+N LI+GLC       A  + +E+ + G  P+
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY+ +++     R+ K  L +L  M+  G   +   Y T+I    K  R+ +A D  +
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           QM   GV    V+YNTLIN  CK  ++E A  L+D+M  +G + DK+T+T ++   C+ G
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           +IK A   ++ M   G + ++  Y  ++  L K G++D A  +  S+++K        Y+
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYN 621

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSG 418
            ++  LCK KR   A +L    ++ G
Sbjct: 622 PVIQALCKRKRTKEAMRLFREMMEKG 647



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 202/400 (50%), Gaps = 6/400 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L++  +N+ V   CK  R+E+A   I +    G  PD VT+N L++  C+      G  
Sbjct: 266 ELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLE 323

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +++ M E G   DV TYNSLI+G  +   +  ++++L  M+     P+  +YN+L+  L 
Sbjct: 324 MMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLC 383

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    + A  + + +    + P   TFN ++ GLC     + A+ +F  +++ G  P+  
Sbjct: 384 KENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEF 443

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ILI+ LC   RL+ A  +LKE+  SG A N + Y T++    +N +     +I   M
Sbjct: 444 TYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM 503

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +  G +     Y T+I    K  R++EA   M+QM+ +G++ D  +Y T++  +C++G +
Sbjct: 504 EMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDI 563

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  ++  M   G E D  T+  LI GLCKAG +  A   L  +   G     +AYN +
Sbjct: 564 KRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPV 623

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
           +  L K  +   A+ +F  M    +  D  TY  +   LC
Sbjct: 624 IQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 219/484 (45%), Gaps = 53/484 (10%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  TR  N+ +    KAN+L+  E +    +   V PDV T+N+LI A C+         
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+ PD  T+ +L+ G    + +  +L + + M+E G      S N L++ L 
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 124 QLGKPDEANRVF--QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           + G+ +EA R    ++  C D      TFN ++NGLC+  +    L M   + + GF  +
Sbjct: 281 KEGRIEEALRFIYEEEGFCPD----QVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK---------------- 225
           + TYN LI GLCK G +  A  IL  +      PN +TY T++                 
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 226 ---------------------CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
                                C   NR  ++ +E+   MK KG   D F Y  +I +   
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNR--EIAMELFEEMKEKGCDPDEFTYSILIESLCS 454

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
             RLKEA   +++M   G   ++V YNTLI+  CK  ++  A  + D+ME  G      T
Sbjct: 455 ERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVT 514

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           +  LI+GLCK+  ++ A   ++ M   G   +   Y  ++    + G I  A ++ ++M 
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574

Query: 385 V----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           +     D  TY +++  LCKA R+  ASKLL S    G+ +   A   V+  L    C+R
Sbjct: 575 LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQAL----CKR 630

Query: 441 EAKK 444
           +  K
Sbjct: 631 KRTK 634



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 201/389 (51%), Gaps = 6/389 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
             V PD   YN+ +    +        T+ ++M    + PDV T+N LI    +   L  
Sbjct: 158 FAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRP 217

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ +L++M   G+ PD  ++ +LM    +    + A R+ + M+       + + N+++N
Sbjct: 218 AILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVN 277

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK    + ALR     ++ GF P+ VT+N L+ GLC+ G ++    ++  + + G   
Sbjct: 278 GLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL 335

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY +++    +  +    +EIL  M  +    +   Y T+I    K   ++ AT+  
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELA 395

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             + + GV  D+ ++N+LI   C     E A  L +EM+++G + D++T++ILI+ LC  
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
             +K A + L+ M   G   N+  YN ++D L K+ ++  A ++F+ ME+    + S TY
Sbjct: 456 RRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +++++ LCK+KR+  A++L+   +  G++
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLK 544



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 186/396 (46%), Gaps = 7/396 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   C+   +++   ++   +  G   DV TYN LI   C+    D    IL+ M 
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMV 364

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ VTYN+LI    + + +  + +L   +   G+ PDV ++NSL+  L      +
Sbjct: 365 SRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNRE 424

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F++M      P   T++I++  LC  R    AL + + ++  G    +V YN LI
Sbjct: 425 IAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLI 484

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  R+  A  I  ++   G + +++TY T++    ++++ +   +++  M  +G  
Sbjct: 485 DGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK 544

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T++  F + G +K A D ++ M  +G + DIV+Y TLI   CK G+++ A  L
Sbjct: 545 PDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKL 604

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  ++ +G       +  +I  LCK    K A RL  E M K G   ++  Y  +   L 
Sbjct: 605 LRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK-GDPPDVITYKIVFRGLC 663

Query: 369 KDG-----KIDHAINVFESMEVKDSFTYSSMVHNLC 399
             G      +D  + + E   + +  ++  +   LC
Sbjct: 664 NGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 180/440 (40%), Gaps = 78/440 (17%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE--MGIPPDVWS 114
           SFD+  T+L +M  + I  D  T+   +     +  L   ++ L  ++E    + PD   
Sbjct: 107 SFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRF 166

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           YN  +  L +  K      +   M+  D  P                             
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMV-ADAVP----------------------------- 196

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                P++ T+NILI+ LCKA +LR A  +L+++ + G  P+  T+TT+M+        +
Sbjct: 197 -----PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVE 251

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L I   M   G          ++    K GR++EA  ++ +   +G   D V++N L+
Sbjct: 252 GALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALV 309

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  C+ G ++    ++D M ++GFE D YT+  LI GLCK G I  A   L +M     +
Sbjct: 310 NGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCE 369

Query: 355 SNLEAYNCIVDRLGKDGKIDHA-----------------------------------INV 379
            N   YN ++  L K+  ++ A                                   + +
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           FE M+ K    D FTYS ++ +LC  +RL  A  LL     SG          ++DGL  
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCK 489

Query: 436 SGCRREAKKIQSKIRMAKIS 455
           +    +A+ I  ++ M  +S
Sbjct: 490 NNRVGDAEDIFDQMEMLGVS 509



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 5/298 (1%)

Query: 153 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L+ L +   + +AL +F+    +  +      ++ L++ L +AG   +   +L+++  S
Sbjct: 62  LLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSS 121

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLK 269
               +  T+   ++    +      +  L  +  + +    D   Y   ++  VK  +LK
Sbjct: 122 KIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLK 181

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
                  +MV D V  D+ ++N LI   CK  +L  A L+L++M   G   D+ T T L+
Sbjct: 182 LVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLM 241

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--VKD 387
            G  +  +++GA    E M + G +    + N +V+ L K+G+I+ A+      E    D
Sbjct: 242 QGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPD 301

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             T++++V+ LC+   +    +++   L+ G  +      +++ GL   G   EA +I
Sbjct: 302 QVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEI 359


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 231/438 (52%), Gaps = 9/438 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           N  +   CK+  LEKA  ++ + IR G    PD+VTYN LI+A+ +            +M
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           + AGI+PDV+T N L++G  ++  +  +L++LD M   G  PDV +YNS++H L   GK 
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKV 255

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  + + M C   +P   TFN +L+G CK      AL +   + +   +P+++TY IL
Sbjct: 256 VEAAEILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + GLC+ G+++ A ++L+E+   G+ P+ I YT+++    ++ + +   +++  M  +G 
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y ++++ + + G + +A + + +MV+  +   + +YN ++    K+G +  A  
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L+ ++  +G+  D  T+  LIDGLCKA  ++ A    + M   G   N      +V  L 
Sbjct: 433 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + G++D A ++   M  K    +   Y+S++  LCK+ R+  A  +L +    GV +   
Sbjct: 493 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDF 552

Query: 425 AQKAVVDGLRHSGCRREA 442
           A + ++  + H G   EA
Sbjct: 553 AYRKLIVSMSHGGRVAEA 570



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 210/399 (52%), Gaps = 9/399 (2%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA +  +A   +       V PDV  +N+LI    +  + D    +   M  + + P++
Sbjct: 73  CKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEI 132

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           VTYN++I+G  ++  L  + +LL+EM+  G    PD+ +YN+L++  ++  +  EA    
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFR 192

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M    + P   T NI+++G+CK+   + AL +  G++  G VP+++TYN +I  LC A
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  A  ILK +  S   P+ +T+ T++    +       LE+L  M R+    D   Y
Sbjct: 253 GKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++    ++G+++ A   +E++V  G   D+++Y +L++  CK G++E A+ L+ EM  
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G       ++ L+ G C+AGN+  AR  L  M  I     L  YN ++  L KDG I  
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
           A+++   +     V D  TY++++  LCKA R+  A  L
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 468



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 202/377 (53%), Gaps = 9/377 (2%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV +YN L+D   +         +   +  +G SP++VT+  LI G  +      +L+ L
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             + E  + PDV+ +N L+H LF+ G PD+A ++F++M    + P   T+N +++GLCK+
Sbjct: 86  RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 161 RYTDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
              + A  +   + + G    P++VTYN LI    +A R+R A    +++  +G  P+ +
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T   ++    ++   +  LEIL  MK  G   D   Y ++I A    G++ EA + ++ M
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
                  D+V++NTL++ +CK G L  A  +L+EM ++    D  T+TIL++GLC+ G +
Sbjct: 266 ---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV 322

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSM 394
           + A   LE + + G+  ++ AY  +VD L K G+I+ A  + + M V+   T    YSS+
Sbjct: 323 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382

Query: 395 VHNLCKAKRLPSASKLL 411
           V   C+A  +  A ++L
Sbjct: 383 VSGYCRAGNVHKAREIL 399



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 154/312 (49%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA  L +A  ++ +  R  +LPDV+TY +L++  C+       + +L  +   G  PD
Sbjct: 281 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 340

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ Y SL+ G  ++  +  +  L+ EM   G    V  Y+SL+    + G   +A  +  
Sbjct: 341 VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA 400

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  ++ P   T+NI+L GL K+     A+ +   L   G+VP++VTYN LI GLCKA 
Sbjct: 401 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 460

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+R A  +  E+   G  PN +T  +++    R  +      ++  M RK +  +   Y 
Sbjct: 461 RVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYT 520

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    K  R+ +A   ++ M   GV LD  +Y  LI      G++  A  + DEM  +
Sbjct: 521 SLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVAR 580

Query: 317 GFECDKYTHTIL 328
           GF  D  T   L
Sbjct: 581 GFLPDGSTSKTL 592



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 168/345 (48%), Gaps = 9/345 (2%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G   DV SYN L+  L + G      +V++D++    +P   TF I++ G CK      A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L   R L +    P++  +N+LI GL K G    A  + + +  S   P  +TY T++  
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 227 CFRNRKYKLGLEILSAMKRKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             ++   +   E+L  M RKG     D   Y T+I AF +  R++EA  + E+M   G+ 
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D+++ N L++  CK+G +E A  +LD M+  G   D  T+  +I  LC AG +  A   
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA-- 259

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
            E +  +    +L  +N ++D   K G +  A+ V E M     + D  TY+ +V+ LC+
Sbjct: 260 -EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             ++  A  LL   ++ G      A  ++VDGL  SG   EA K+
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 133/250 (53%), Gaps = 10/250 (4%)

Query: 174 QKHGFVPELVTYNILIKGLCKAGR-LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++ G+  ++ +YN L+  L K+G   RT + + K+L  SG +PN +T+  +++   +  +
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGK-VYKDLLHSGCSPNLVTFKILIRGNCKAGQ 77

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               LE L A+       D + +  +I    K G   +A    E M +  V+ +IV+YNT
Sbjct: 78  AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNT 137

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           +I+  CK G LE A  LL+EM ++G +   D  T+  LI+   +A  I+ A    E M  
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 406
            G + ++   N +V  + KDG ++ A+ + + M+    V D  TY+S++H LC A ++  
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257

Query: 407 ASKLL--LSC 414
           A+++L  +SC
Sbjct: 258 AAEILKTMSC 267



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 108/221 (48%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V  +C+A  + KA  I+ + + + ++P + TYN+++    +  S     ++++ +   G 
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYN+LI G  + + +  + DL DEM   G  P+  +  S++  L ++G+ D+A  
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M      P    +  +++GLCK+   D+A  +   ++  G   +   Y  LI  + 
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             GR+  A  +  E+   G  P+  T  T+ +    N  ++
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 7/231 (3%)

Query: 229 RNRKYKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
           R+ +  L ++    A ++ GY  D   Y  ++   VK G         + ++  G   ++
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           V++  LI   CK G+   A   L  +++     D Y   +LI GL K GN   A    E 
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM------EVKDSFTYSSMVHNLCKA 401
           M        +  YN ++  L K G ++ A  + E M         D  TY+++++   +A
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            R+  A         +G+         +V G+   G   EA +I   +++A
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA 233



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 66/139 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKANR+ +A  +  +    G  P+ VT   ++   C+    D  ++++  M  
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +P+VV Y SLI G  ++  +  +  +LD M   G+  D ++Y  L+  +   G+  E
Sbjct: 510 KRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAE 569

Query: 131 ANRVFQDMICGDLTPCTAT 149
           A  ++ +M+     P  +T
Sbjct: 570 AMAMYDEMVARGFLPDGST 588



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L   V   C+  R++ A +++++  R    P+VV Y  LID  C+    D    +L+ MR
Sbjct: 484 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMR 543

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             G++ D   Y  LI   +    ++ ++ + DEM+  G  PD
Sbjct: 544 GQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 227/456 (49%), Gaps = 33/456 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +++ A  ++   +    +PDV+TY  LI   CQ  + D    ++ +M+E
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G++PD V YN+L+ G  + + L     LL+EM+E G  PD +SYN+++ CL + GK +E
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEE 250

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + MI     P   T+N +++G CK    D A R+   +      P ++TY  LI 
Sbjct: 251 AGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIG 310

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  +A RL  A  +++++  +G +P+ +TY  ++    +  K +   E+L  M  K    
Sbjct: 311 GFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  ++    K+G++ +A   +E M+  G Q ++V++NT+I+ +CK GK++  + +L
Sbjct: 371 DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430

Query: 311 DEMEKQGFECDKYTHTILIDGLCKA-----------------------------GNIKGA 341
           + M++     D  T++ LIDG CKA                             G ++ A
Sbjct: 431 ELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEA 490

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
           +  ++ M K G       Y  I+  L    + D A+ + + M  +    + +TYS +++ 
Sbjct: 491 QEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILING 550

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           LCK KR+  A  +L   L+ G     +   +++DG 
Sbjct: 551 LCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 218/425 (51%), Gaps = 10/425 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK N+LE+   ++ + +  G  PD  +YN ++   C+   ++    IL +M E    PD
Sbjct: 207 LCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPD 266

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSL+ G  + S +  +  LL++M+     P V +Y +L+    +  +  +A RV +
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME 326

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM    ++P   T+N +L+GLCK    + A  +   + +    P++VTY+IL+ GLCK G
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  AR +L+ + + G  PN +T+ T++    +  K   G ++L  MK    T D   Y 
Sbjct: 387 KVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYS 446

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K  R+++A   +      G+  D  SY++++   C  GK+E A  ++D M KQ
Sbjct: 447 TLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQ 500

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G       + ++I GLC       A   L+ M++ G + NL  Y+ +++ L K  +++ A
Sbjct: 501 GCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDA 560

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           INV + M     V D  TY+S++   CK  ++ +A +   +   SG    K A   ++ G
Sbjct: 561 INVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISG 620

Query: 433 LRHSG 437
              SG
Sbjct: 621 FCQSG 625



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 214/417 (51%), Gaps = 2/417 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R+++A  ++ + I+    PD   YN LI   C+    DA   +L  M E    PD
Sbjct: 102 LCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPD 161

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY SLI G  + + L  +  L+++M E G+ PD  +YN+L++ L +  + +E +++ +
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P T ++N ++  LC++   + A ++   + +    P++VTYN L+ G CK  
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  +L+++     AP  ITYTT++    R  +      ++  M + G + D   Y 
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G+L+EA + +E MV      D+V+Y+ L+N  CK GK++ A LLL+ M ++
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T   +IDG CKAG +      LE M ++    ++  Y+ ++D   K  ++  A
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461

Query: 377 INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             +       D  +YSSM+  LC   ++  A +++    K G     S    ++ GL
Sbjct: 462 FAILGI--SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 213/446 (47%), Gaps = 49/446 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           PDV+T+N ++ AYCQ    D     L+  R +   SP   TY  LI G  +   +  +  
Sbjct: 57  PDVITHNTILKAYCQIGDLDRA---LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQ 113

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LLDEM++    PD   YN L+  L ++GK D A  V + M+     P   T+  ++ G C
Sbjct: 114 LLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCC 173

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +    D A ++   +++ G  P+ V YN L+ GLCK  +L     +L+E+ ++G  P+  
Sbjct: 174 QTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTF 233

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           +Y T++ C   + KY+   +IL  M  K    D   Y +++  F K+ ++ EA   +E M
Sbjct: 234 SYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM 293

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V       +++Y TLI  + +  +L  AY ++++M K G   D  T+  L+DGLCKAG +
Sbjct: 294 VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKL 353

Query: 339 K-----------------------------------GARLHLEYMNKIGFDSNLEAYNCI 363
           +                                    ARL LE M + G   NL  +N +
Sbjct: 354 EEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K GK+D    V E M+      D  TYS+++   CKA R+  A  +L      G+
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GI 467

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
              K++  ++++GL  +G   EA+++
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQEV 493



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 207/421 (49%), Gaps = 33/421 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C++ + E+A  I+   I     PDVVTYN L+D +C+    D    +L  M  
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +P V+TY +LI G +R   L+ +  ++++M + GI PD+ +YN L+  L + GK +E
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEE 355

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + + M+  D  P   T++I++NGLCK    D+A  +   + + G  P LVT+N +I 
Sbjct: 356 AHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMID 415

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNR------------------ 231
           G CKAG++     +L+ + +    P+ +TY+T++   C  NR                  
Sbjct: 416 GFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYS 475

Query: 232 ----------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                     K +   E++  M ++G       Y  +I     + R  EA   ++ M   
Sbjct: 476 SMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSER 535

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + ++ +Y+ LIN  CK  ++E A  +LD M ++G   D  T+T LIDG CK   +  A
Sbjct: 536 GCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAA 595

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
               + M   G + +  AYN ++    + G ++ AI V + M  K    D+ TY S++ +
Sbjct: 596 YQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655

Query: 398 L 398
           L
Sbjct: 656 L 656



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 204/415 (49%), Gaps = 16/415 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P   TY  LI  + +  +      I N M     SPDV+T+N+++          C +  
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKA-------YCQIGD 74

Query: 100 LDEML-----EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
           LD  L     +M   P  ++Y  L+H L Q  + DEA ++  +MI  D  P  A +N ++
Sbjct: 75  LDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLI 134

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            GLCK    D A  + + + +   VP+++TY  LI G C+   L  AR +++++ +SG  
Sbjct: 135 AGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLT 194

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ + Y  ++    +  + +   ++L  M   G   D F Y TV+A   + G+ +EA   
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKI 254

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +E+M+      D+V+YN+L++ +CK  K++ A  LL++M  +       T+T LI G  +
Sbjct: 255 LEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSR 314

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FT 390
           A  +  A   +E M K G   +L  YNC++D L K GK++ A  + E M  KD      T
Sbjct: 315 ADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT 374

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           YS +V+ LCK  ++  A  LL   L+ G +        ++DG   +G   E  K+
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV 429



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 37/356 (10%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P E    F++       P  +T+  ++ G  +   +   L +   +    F P+++T+N
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 187 ---------------------------------ILIKGLCKAGRLRTARWILKELGDSGH 213
                                            ILI GLC+  R+  A  +L E+     
Sbjct: 64  TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+A  Y  ++    +  K      +L  M  +    D   Y ++I    +   L EA  
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            ME+M   G+  D V+YN L+N  CK+ +LE    LL+EM + G E D +++  ++  LC
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           ++G  + A   LE M +     ++  YN ++D   K  K+D A  + E M          
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           TY++++    +A RL  A +++    K+G+         ++DGL  +G   EA ++
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 113/271 (41%), Gaps = 35/271 (12%)

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P   TY  LI G  +AG  +    I  E+     +P+ IT+ TI+K   +          
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLD---RA 78

Query: 240 LSAMKRKGY-TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           LS  + K + +   F YC +I    +  R+ EA   +++M+      D   YN LI   C
Sbjct: 79  LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K GK++AA  +L  M ++    D  T+T LI G C+   +  AR  +E M + G      
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL----- 193

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                                       D+  Y+++++ LCK  +L   SKLL   +++G
Sbjct: 194 --------------------------TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 +   VV  L  SG   EA KI  K+
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKM 258



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N+++ A          G  PD + YN+LI  +CQ  + +    ++  M E G +PD
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPD 645

Query: 77  VVTYNSLIAGAT 88
             TY SL+   T
Sbjct: 646 AATYFSLMRSLT 657


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 220/446 (49%), Gaps = 10/446 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  RL   + +++D  R G++P+ VTYN L+  YC+  S    + I+  M++
Sbjct: 244 NTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I PD+ TYN LI G      +   L+L+D M  + + PDV +YN+L+   F+LG   E
Sbjct: 304 TNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILI 189
           A ++ + M    + P   T NI L  LCK    +   R  + L + HGF P++VTY+ LI
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLI 423

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           K   K G L  A  +++E+G  G   N IT  TI+    + RK      +L +  ++GY 
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYI 483

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  + +  ++++A +  ++M    +   + ++N+LI   C  GK E A   
Sbjct: 484 VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEK 543

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN---KIGFDSNLEAYNCIVDR 366
            DE+ + G   D  T   +I G CK G ++ A    E+ N   K  F  +    N +++ 
Sbjct: 544 FDELAESGLLPDDCTFNSIILGYCKEGRVEKA---FEFYNESIKHSFKPDNYTCNILLNG 600

Query: 367 LGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
           L K+G  + A+N F ++  +   D+ TY++M+   CK K+L  A  LL    +  +   +
Sbjct: 601 LCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDR 660

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKI 449
               +++  L   G   EA ++  K 
Sbjct: 661 FTYNSIITSLMEDGKLSEADELLKKF 686



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 228/444 (51%), Gaps = 6/444 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+   L I +  +  +  +  A  +  D +++GV  DV T+N+L++ YC     +    +
Sbjct: 167 LTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGM 226

Query: 65  LNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           L RM  E  ++PD VTYN+++   ++   LS   DLL +M   G+ P+  +YN+L++   
Sbjct: 227 LERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYC 286

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG   EA ++ + M   ++ P   T+NI++NG+C        L +   ++     P++V
Sbjct: 287 KLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVV 346

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSA 242
           TYN LI G  + G    A+ +++++ + G  PN +T+   +K  C   ++ ++  ++   
Sbjct: 347 TYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKEL 406

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++  G++ D   Y T+I A++K+G L  A + M +M   G++++ ++ NT+++  CKE K
Sbjct: 407 VEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A+ LLD   K+G+  D+ T+  LI G  +   ++ A    + M +I     +  +N 
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNS 526

Query: 363 IVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++  L   GK + A+  F    ES  + D  T++S++   CK  R+  A +     +K  
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 419 VRILKSAQKAVVDGLRHSGCRREA 442
            +        +++GL   G   +A
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKA 610



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 199/419 (47%), Gaps = 9/419 (2%)

Query: 28  AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           +++   + L   P    +++ + AY           +  +M    + P+++T N+L+ G 
Sbjct: 117 SLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGL 176

Query: 88  TR---NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DL 143
            R   +  ++ + ++ D+M+++G+  DV ++N L++     GK ++A  + + M+   ++
Sbjct: 177 VRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNV 236

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P   T+N +L  + K     +   +   ++++G VP  VTYN L+ G CK G L+ A  
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           I++ +  +   P+  TY  ++         + GLE++  MK      D   Y T+I    
Sbjct: 297 IVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCF 356

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDK 322
           ++G   EA   MEQM  DGV+ + V++N  +   CKE K E     + E+ E  GF  D 
Sbjct: 357 ELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDI 416

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  LI    K G++ GA   +  M + G   N    N I+D L K+ K+D A N+ +S
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDS 476

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                 + D  TY +++    + +++  A ++     +  +    +   +++ GL H G
Sbjct: 477 AHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHG 535



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 13/301 (4%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++T  LN  +   CK  ++++A  ++    + G + D VTY  LI  Y +    +  + 
Sbjct: 448 KMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFE 507

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M+   I+P V T+NSLI G   +     +++  DE+ E G+ PD  ++NS++    
Sbjct: 508 MWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYC 567

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ ++A   + + I     P   T NI+LNGLCK   T+ AL  F  L     V + V
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTV 626

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN +I   CK  +L+ A  +L E+ +    P+  TY +I+     + K     E+L   
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K      FG      +  +   L+   +       + ++ + ++Y+ +IN  C  G+L
Sbjct: 687 SGK------FG------SMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRL 734

Query: 304 E 304
           +
Sbjct: 735 K 735



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 164/365 (44%), Gaps = 15/365 (4%)

Query: 82  SLIAGATRNSLLSCSL--DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           SL+    R S  S SL   LL   L +  PP    ++  +      GKP  A +VFQ MI
Sbjct: 99  SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMI 158

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTD-----NALRMFRGLQKHGFVPELVTYNILIKGLCK 194
              L P   T N +L GL   RY       +A  +F  + K G   ++ T+N+L+ G C 
Sbjct: 159 RLKLKPNLLTCNTLLIGLV--RYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCL 216

Query: 195 AGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            G+L  A  +L+ +  +    P+ +TY TI+K   +  +     ++L  MKR G   +  
Sbjct: 217 EGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRV 276

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  + K+G LKEA   +E M    +  D+ +YN LIN  C  G +     L+D M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVM 336

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           +    + D  T+  LIDG  + G    A+  +E M   G   N   +N  +  L K+ K 
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKR 396

Query: 374 DHAI-NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +     V E +E+     D  TY +++    K   L  A +++    + G+++       
Sbjct: 397 EEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456

Query: 429 VVDGL 433
           ++D L
Sbjct: 457 ILDAL 461



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 8/173 (4%)

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 346
           ++  ++ Y   GK   A  +  +M +   + +  T   L+ GL +   + +I  AR   +
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKA 401
            M KIG   +++ +N +V+    +GK++ A+ + E M  +     D+ TY++++  + K 
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKK 253

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            RL     LLL   ++G+   +     +V G    G  +EA +I   ++   I
Sbjct: 254 GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 233/450 (51%), Gaps = 4/450 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +++T  LNI V  +CKA   +K +A+I +  +  V PDVVT+N+++DA  +    +A   
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +++ M   G+ P +VTYNS++ G  R+ +   + ++  EM + G+ PDV S+  L+    
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+ +EA +++++M    + P   +F+ ++    +    D+A+   R ++  G VP+ V
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y ++I G C+AG +  A  +  E+   G  P+ +TY T++    + R+      +L+ M
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           + +G   D   + T+I  +   G+L +A    + M+   ++ DIV+YNTLI+  C++G L
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L D+M  +    +  T++ILID  C+ G ++ A   L+ M   G   N+  YN I
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    + G +       + M V     D  TY++++H   K  ++  A KLL    K  V
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 572

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +        +++G    G  +EA  I  K+
Sbjct: 573 QPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 180/338 (53%), Gaps = 2/338 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +  +++ A A + +    G++PD V Y M+I  +C+         + + M   G  PD
Sbjct: 306 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 365

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G  +   L  +  LL+EM E G+PPD+ ++ +L+H     GK D+A ++F 
Sbjct: 366 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 425

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L P   T+N +++G+C+    D A  ++  +      P  VTY+ILI   C+ G
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A   L E+ + G  PN +TY +I+K   R+     G + L  M     + D   Y 
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  ++K  ++ +A   +  M  + VQ D+V+YN LIN +   G ++ A  + ++M  +
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
           G E D+YT+  +I+G   AGN K A +LH E + + GF
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR-GF 642



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 187/377 (49%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
            R   I +  FC+   +E+A  I  +    G+ PD+V+++ LI  + +    D     L 
Sbjct: 261 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 320

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G+ PD V Y  +I G  R  L+S +L + DEM+  G  PDV +YN+L++ L +  
Sbjct: 321 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 380

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  +  +M    + P   TF  +++G C     D AL++F  +      P++VTYN
Sbjct: 381 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 440

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G+C+ G L  A  +  ++      PN +TY+ ++       + +     L  M  K
Sbjct: 441 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y ++I  + + G + +   ++++M+ + V  D+++YNTLI+ Y KE K+  A
Sbjct: 501 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 560

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + LL+ MEK+  + D  T+ +LI+G    GN++ A    E M   G + +   Y  +++ 
Sbjct: 561 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620

Query: 367 LGKDGKIDHAINVFESM 383
               G    A  + + M
Sbjct: 621 HVTAGNSKEAFQLHDEM 637



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 166/313 (53%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  + +  FC+A  +  A  +  + +  G LPDVVTYN L++  C+         +LN M
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           RE G+ PD+ T+ +LI G      L  +L L D ML   + PD+ +YN+L+  + + G  
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+AN ++ DM   ++ P   T++I+++  C+    ++A      +   G +P ++TYN +
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           IKG C++G +   +  L+++  +  +P+ ITY T++    +  K     ++L+ M+++  
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 572

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  F   G ++EA    E+M   G++ D  +Y ++IN +   G  + A+ 
Sbjct: 573 QPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ 632

Query: 309 LLDEMEKQGFECD 321
           L DEM ++GF  D
Sbjct: 633 LHDEMLQRGFAPD 645



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 176/378 (46%), Gaps = 4/378 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I++ +  +  +P    ++ LI   T++     + +    +L+  +P    + N+L+  L 
Sbjct: 73  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 132

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G P  A   ++ +   +    T T NIM++  CK    D    +   ++K    P++V
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+++    +AG    A  ++  +   G  P  +TY +++K   R+  +    E+   M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   D   +  +I  F ++G ++EA    ++M   G++ D+VS++ LI L+ + GK+
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A   L EM   G   D   +T++I G C+AG +  A    + M   G   ++  YN +
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K+ ++  A  +   M  +    D  T+++++H  C   +L  A +L  + L   +
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 420 RILKSAQKAVVDGLRHSG 437
           R        ++DG+   G
Sbjct: 433 RPDIVTYNTLIDGMCRQG 450


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 233/450 (51%), Gaps = 4/450 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +++T  LNI V  +CKA   +K +A+I +  +  V PDVVT+N+++DA  +    +A   
Sbjct: 92  EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +++ M   G+ P +VTYNS++ G  R+ +   + ++  EM + G+ PDV S+  L+    
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+ +EA +++++M    + P   +F+ ++    +    D+A+   R ++  G VP+ V
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y ++I G C+AG +  A  +  E+   G  P+ +TY T++    + R+      +L+ M
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           + +G   D   + T+I  +   G+L +A    + M+   ++ DIV+YNTLI+  C++G L
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L D+M  +    +  T++ILID  C+ G ++ A   L+ M   G   N+  YN I
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    + G +       + M V     D  TY++++H   K  ++  A KLL    K  V
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 511

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +        +++G    G  +EA  I  K+
Sbjct: 512 QPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 178/335 (53%), Gaps = 1/335 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +  +++ A A + +    G++PD V Y M+I  +C+         + + M   G  PD
Sbjct: 245 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G  +   L  +  LL+EM E G+PPD+ ++ +L+H     GK D+A ++F 
Sbjct: 305 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 364

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L P   T+N +++G+C+    D A  ++  +      P  VTY+ILI   C+ G
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A   L E+ + G  PN +TY +I+K   R+     G + L  M     + D   Y 
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  ++K  ++ +A   +  M  + VQ D+V+YN LIN +   G ++ A  + ++M  +
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK 350
           G E D+YT+  +I+G   AGN K A +LH E + +
Sbjct: 545 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 187/377 (49%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
            R   I +  FC+   +E+A  I  +    G+ PD+V+++ LI  + +    D     L 
Sbjct: 200 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 259

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G+ PD V Y  +I G  R  L+S +L + DEM+  G  PDV +YN+L++ L +  
Sbjct: 260 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 319

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  +  +M    + P   TF  +++G C     D AL++F  +      P++VTYN
Sbjct: 320 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 379

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G+C+ G L  A  +  ++      PN +TY+ ++       + +     L  M  K
Sbjct: 380 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y ++I  + + G + +   ++++M+ + V  D+++YNTLI+ Y KE K+  A
Sbjct: 440 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 499

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + LL+ MEK+  + D  T+ +LI+G    GN++ A    E M   G + +   Y  +++ 
Sbjct: 500 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 559

Query: 367 LGKDGKIDHAINVFESM 383
               G    A  + + M
Sbjct: 560 HVTAGNSKEAFQLHDEM 576



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 176/378 (46%), Gaps = 4/378 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I++ +  +  +P    ++ LI   T++     + +    +L+  +P    + N+L+  L 
Sbjct: 12  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 71

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G P  A   ++ +   +    T T NIM++  CK    D    +   ++K    P++V
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+++    +AG    A  ++  +   G  P  +TY +++K   R+  +    E+   M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   D   +  +I  F ++G ++EA    ++M   G++ D+VS++ LI L+ + GK+
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A   L EM   G   D   +T++I G C+AG +  A    + M   G   ++  YN +
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K+ ++  A  +   M  +    D  T+++++H  C   +L  A +L  + L   +
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 420 RILKSAQKAVVDGLRHSG 437
           R        ++DG+   G
Sbjct: 372 RPDIVTYNTLIDGMCRQG 389



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 100/202 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   L+KA  +  D     + P+ VTY++LID++C+    +  +  L+ M  
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+++TYNS+I G  R+  +S     L +M+   + PD+ +YN+L+H   +  K  +
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 498

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M    + P   T+N+++NG   +     A  +F  +   G  P+  TY  +I 
Sbjct: 499 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 558

Query: 191 GLCKAGRLRTARWILKELGDSG 212
           G   AG  + A  +  E+   G
Sbjct: 559 GHVTAGNSKEAFQLHDEMLQRG 580


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 208/390 (53%), Gaps = 5/390 (1%)

Query: 17  FCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FCK  R+E+A   I +  +R G  PD  T+NML++   +         +++ M   G  P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D+ TYNSLI+G  +   +  ++ +L++M+E    P+  +YN+++  L +  + +EA ++ 
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +    + P   T+N ++ GLC +R    A+ +++ ++  G  P+  TYN+LI  LC  
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L+ A  +LKE+  SG A N ITY T++    +N++     EI   M+ +G + +   Y
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    K  R++EA+  M+QM+ +G++ D  +YN+L+  +CK G ++ A  ++  M  
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G E D  T+  LI GLCKAG ++ A   L  +   G +    AYN ++  L +  +   
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKE 634

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKA 401
           A+ +F  M    E  D+ TY  +   LC+ 
Sbjct: 635 AVRLFREMIEKAEAPDAVTYKIVFRGLCQG 664



 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 231/480 (48%), Gaps = 40/480 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +      N+L+  E    + +  G+ PDV T+N+LI A C+         ++
Sbjct: 159 NTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLM 218

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M + G+ PD  T+ +++ G      L  ++ + ++M+E G      + N L++   + 
Sbjct: 219 EEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKE 278

Query: 126 GKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           G+ +EA R  ++M   +   P   TFN+++NGL K  +  +AL +   + + GF P++ T
Sbjct: 279 GRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYT 338

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK------------------- 225
           YN LI GLCK G +  A  +L ++ +   +PN +TY TI+                    
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398

Query: 226 --------CCFRN--------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
                   C + +        R + + +E+   MK KG   D F Y  +I +    G+L+
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + +++M   G   ++++YNTLI+ +CK  ++  A  + D+ME QG   +  T+  LI
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---- 385
           DGLCK+  ++ A   ++ M   G   +   YN ++    K G I  A ++ ++M      
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY +++  LCKA R+ +A+KLL +    G+ +   A   V+  L      +EA ++
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 155/330 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   +++A  ++   I     P+ VTYN +I   C+    +    +   +  
Sbjct: 340 NSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTG 399

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDV TYNSLI G   +   + +++L  EM   G  PD ++YN L+  L   GK  E
Sbjct: 400 KGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQE 459

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M          T+N +++G CKN+    A  +F  ++  G     VTYN LI 
Sbjct: 460 ALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLID 519

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+ R+  A  ++ ++   G  P+  TY +++    +    K   +I+  M   G   
Sbjct: 520 GLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEP 579

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+IA   K GR++ AT  +  +   G+ L   +YN +I    +  + + A  L 
Sbjct: 580 DIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLF 639

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            EM ++    D  T+ I+  GLC+ G   G
Sbjct: 640 REMIEKAEAPDAVTYKIVFRGLCQGGGPIG 669



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 1/328 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  + T CK N++E+A  + +     G+LPDV TYN LI   C   +      + 
Sbjct: 370 NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELY 429

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G  PD  TYN LI        L  +L+LL EM   G   +V +YN+L+    + 
Sbjct: 430 KEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKN 489

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  EA  +F  M    ++  + T+N +++GLCK+   + A ++   +   G  P+  TY
Sbjct: 490 KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N L+   CKAG ++ A  I++ +   G  P+ +TY T++    +  + +   ++L  ++ 
Sbjct: 550 NSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQM 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-EGKLE 304
           KG       Y  VI A  +  R KEA     +M+      D V+Y  +    C+  G + 
Sbjct: 610 KGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIG 669

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGL 332
            A   + EM ++G+  +  +  +L +GL
Sbjct: 670 EAVDFVMEMLERGYVPEFSSFYMLAEGL 697



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 7/304 (2%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L+ L +   +   + +F    K   F P    +  ++  L KAG     + ILKE+  S
Sbjct: 59  LLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKIS 118

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKE 270
               +  +    ++       Y   L+ + AM+ + G   +   Y  ++   V   +LK 
Sbjct: 119 LSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKL 178

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
                  MV+ G++ D+ ++N LI   C+  ++  A LL++EME  G   D+ T T ++ 
Sbjct: 179 VEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQ 238

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G  + GN+ GA    E M + G        N +V+   K+G+I+ A+   E M ++    
Sbjct: 239 GFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF 298

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D +T++ +V+ L K   +  A +++   L+ G         +++ GL   G   EA K+
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358

Query: 446 QSKI 449
            +++
Sbjct: 359 LNQM 362


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 229/484 (47%), Gaps = 75/484 (15%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ V T C    L  A + +      G+ PD VTYN L++A+C+        T+L RM+
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + GI P   TYN+L++   R   +  + D+++ M   G  PD+W+YN L   L Q GK D
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA ++  +M   G ++P   T+N +++   K + + +AL +   +++ G    LVT+NI+
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC---------CF----------- 228
           +KGLC+ G+L  A   L+ + + G  P+ ITY T++            F           
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL 451

Query: 229 ---------------RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------- 264
                          + ++Y+   E+L A  ++G+  D   Y TV+AA+ K         
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511

Query: 265 --------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
                                     +G+L EA D + +++  G+  D  +YN +I+ YC
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEG LE A+   ++M +  F+ D  T   L++GLC  G ++ A    E   + G   ++ 
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVI 631

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++  L KD  +D A+  F  MEV+    D FTY+ ++  L +A R   A K+L   
Sbjct: 632 TYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691

Query: 415 LKSG 418
            +SG
Sbjct: 692 NESG 695



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 215/471 (45%), Gaps = 55/471 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDA--YCQFVSFDAGYTILNR 67
           N+     C+A ++++A  +  +  +LG++ PDVVTYN L+DA   CQ  S DA   +L  
Sbjct: 318 NVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSS-DA-LNLLEE 375

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MRE G+   +VT+N ++ G  R   L  +L  L+ M E G+ PDV +YN+L+    + G 
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV---- 183
             +A  +  +M+   L   T T N +L  LCK +  + A  + R   + GFVP+ V    
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495

Query: 184 -------------------------------TYNILIKGLCKAGRLRTARWILKELGDSG 212
                                          TYN LIKGL   G+L  A   L EL + G
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+  TY  I+    +    +   +  + M    +  D     T++      GRL++A 
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              E  V  G ++D+++YNTLI   CK+  ++ A     +ME +G + D +T+ +L+  L
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675

Query: 333 CKAGNIKGARLHLEYMNKIG----------FDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            +AG    A+  L  +N+ G            S++EA        GKD ++   I    +
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVET-----GKDPEVKSDIESVGN 730

Query: 383 MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +  D  +Y+  +  LC   +L  A  +L   ++ G+ +  S    +++GL
Sbjct: 731 TQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 166/333 (49%), Gaps = 3/333 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+ T  LN  +   CK  R E+AE ++    + G +PD V+Y  ++ AY +    +    
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M +  ++P + TYN+LI G +    L+ ++D L+E++EMG+ PD  +YN ++H   
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  ++A +    M+     P   T N ++NGLC     + A+++F    + G   +++
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVI 631

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+ LCK   + TA     ++   G  P+  TY  ++       +     ++L  +
Sbjct: 632 TYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691

Query: 244 KRKGYTFDGFGYCTVIAAF--VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
              G  +  F Y ++ ++   V+ G+  E    +E  V +    D  SYN  I   C  G
Sbjct: 692 NESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIES-VGNTQGDDQESYNKYIKELCIGG 750

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +L+ A  +LDEM ++G   D  T+  L++GL K
Sbjct: 751 QLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 11/318 (3%)

Query: 110 PDVWSYNSLMHCLFQLGK--PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           P + + N+++  L +     P  +   F  +I   L P   TFN++++  C      +AL
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
                +Q  G  P+ VTYN L+   C+ G L  AR +L  +   G  P   TY T++   
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQMVTDGVQ 284
            R    K   +++ AM   G+  D + Y  + A   + G++ EA    D MEQ+    V 
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI--VS 347

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D+V+YNTL++   K  +   A  LL+EM ++G +    TH I++ GLC+ G ++ A   
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           LE M + G   ++  YN ++D   K G +  A  + + M       D+FT +++++NLCK
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 467

Query: 401 AKRLPSASKLLLSCLKSG 418
            KR   A +LL +  + G
Sbjct: 468 EKRYEEAEELLRAPPQRG 485



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 5/182 (2%)

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G L +A   + +M   G+  D V+YNTL+N +C++G L  A  LL  M+K+G    + T+
Sbjct: 223 GTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATY 282

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
             L+    + G IK A   +E M   GF+ +L  YN +   L + GK+D A  + + ME 
Sbjct: 283 NTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342

Query: 385 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
                 D  TY+++V    K +R   A  LL    + GV+        +V GL   G   
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLE 402

Query: 441 EA 442
           EA
Sbjct: 403 EA 404



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 36/226 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  +CK   LEKA       +     PDVVT N L++  C +   +    +     E
Sbjct: 564 NIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVE 623

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DV+TYN+LI    +++ +  +L    +M   G+ PDV++YN L+  L + G+  E
Sbjct: 624 KGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVE 683

Query: 131 ANRVFQDM-----------------------------ICGDLTPCTAT-------FNIML 154
           A ++   +                             +  D+     T       +N  +
Sbjct: 684 AQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYI 743

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             LC       A  +   + + G   +  TY  L++GL K  + +T
Sbjct: 744 KELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQT 789


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV+ YN ++  YC     DA   ++  M    + PD  TYN+LI G         +L +
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVV 178

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD+ML  G  PDV +Y  L+    +     +A ++  +M      P   T+N+++NG+C+
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D+A+   + L  HG  P  V+YNI++KGLC A R   A  ++ E+   G+ PN +T
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    R    +  +E+L  + + G T +   Y  ++ AF K  ++  A  ++E MV
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   DIVSYNTL+   C+ G+++AA  LL +++ +G      ++  +IDGL KAG  K
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMV 395
            A   L  M   G   ++  Y+ I   L ++ +I+ AI  F   + M ++ ++  Y++++
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +   +A  L +  + +G    +S    +++GL + G  +EA+++  ++
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 182/366 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   R   A  ++ D +R G +PDVVTY +L++A C+   +     +L+ MR 
Sbjct: 160 NTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA 219

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +PD++TYN ++ G  +   +  +++ L  +   G  P+  SYN ++  L    + ++
Sbjct: 220 KGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWED 279

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++  +M      P   TFN++++ LC+    + A+ +   + K+G  P  ++YN ++ 
Sbjct: 280 AEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH 339

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK  ++  A   ++ +   G  P+ ++Y T++    R  +    +E+L  +K KG T 
Sbjct: 340 AFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 399

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y TVI    K G+ KEA + + +MVT G+Q DI++Y+T+ +  C+E ++E A    
Sbjct: 400 VLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF 459

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +++  G   +   +  ++ GLCK      A     YM   G   N   Y  +++ L  +
Sbjct: 460 CKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYE 519

Query: 371 GKIDHA 376
           G +  A
Sbjct: 520 GLVKEA 525



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 146/308 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   C+  R++ A   +      G  P+ V+YN+++   C    ++    ++  M +
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQ 289

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVT+N LI+   R  L+  ++++LD++ + G  P+  SYN ++H   +  K D 
Sbjct: 290 KGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 349

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + M+     P   ++N +L  LC+    D A+ +   L+  G  P L++YN +I 
Sbjct: 350 AMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 409

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+ + A  +L E+   G  P+ ITY+TI     R  + +  +     ++  G   
Sbjct: 410 GLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRP 469

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  ++    K      A D    M+++G   +  +Y  LI     EG ++ A  LL
Sbjct: 470 NTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELL 529

Query: 311 DEMEKQGF 318
            E+  +G 
Sbjct: 530 GELCSRGV 537



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 117/244 (47%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   C+   +E A  ++    + G  P+ ++YN ++ A+C+    D     +  M 
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD+V+YN+L+    R   +  +++LL ++ + G  P + SYN+++  L + GK  
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +  +M+   L P   T++ + +GLC+    + A+R F  +Q  G  P  V YN ++
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK      A  +   +  +G  PN  TYT +++        K   E+L  +  +G  
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538

Query: 250 FDGF 253
             G 
Sbjct: 539 SKGL 542



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 37/297 (12%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN--ILIKGLCKAGRLRTAR 202
           P  A  N  L GL +    + ALR+   +   G  P         LIK LC +GR   AR
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTAEAR 114

Query: 203 WIL---------------------------KELGDSGHAPNAITYTTIMK-CCFRNRKYK 234
            +L                           + + D    P++ TY T+++  C R R   
Sbjct: 115 RVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGN 174

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L +L  M R+G   D   Y  ++ A  K    K+A   +++M   G   DI++YN ++
Sbjct: 175 -ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVV 233

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  C+EG+++ A   L  +   G E +  ++ I++ GLC A   + A   +  M++ G+ 
Sbjct: 234 NGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP 293

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
            N+  +N ++  L + G ++ A+ V + +       +S +Y+ ++H  CK K++  A
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 350


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 210/414 (50%), Gaps = 7/414 (1%)

Query: 13   CVCTFCKANRLEKA-EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
            C C      RL++  +A+ +   +L   P++ T+ +LI   C+       Y +L  M   
Sbjct: 847  CNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRH 906

Query: 72   GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDE 130
            G+  +V+ +N +I G      L  +L+L  EM E G  PPDV++Y++++  L + GK D+
Sbjct: 907  GVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 966

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A R+ +DM+    +P   T++ +L+GLCK    D A  + + + + G  P +VTYN +I 
Sbjct: 967  ACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 1026

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            G CK GR+  A  +L+E+ D G  PN +TYT ++    +  K +  + ++  M  KGY  
Sbjct: 1027 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 1086

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
            + F Y +++  F K   ++ A   +  M+  G   ++VSYNT+I   CK  K+    LLL
Sbjct: 1087 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 1146

Query: 311  DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            ++M       D  T   +ID +CK   +  A      + + G   NL  YN +V  L K 
Sbjct: 1147 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 1206

Query: 371  GKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             + D A  +   M  K     D  TY++++  LCK+KR+  A KL L  L  G+
Sbjct: 1207 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 206/399 (51%), Gaps = 4/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKANR+E A  ++   +  G  PDVV+Y  +I+  C+    D    ++++M + G  P+
Sbjct: 275 FCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY +L+ G  R   L  +++L+ +M E G  P+  +YN++MH   +    + A++V Q
Sbjct: 335 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI     P    ++ +++G CK      A  +   + + G  P++   + LI  LCKA 
Sbjct: 395 MMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAA 454

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            + +A+ +L+       AP+ + Y+ ++    + ++       L  M +     D   Y 
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +V+    K  R+ +A    ++M   GV  D+V+Y+ +I+ +CK+  L++A+ +L+ M++ 
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  T++ LI+GLCKAG +  A    + M   G   NL  YN ++D L K  K++ A
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
             + E M       DS TY+ +++ LC A RL  A ++L
Sbjct: 635 AEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVL 673



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 210/430 (48%), Gaps = 48/430 (11%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
             CKA +L++A A++    R G  P++VTYN +ID +C+    D  Y +L  M + G  P+
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 77   VVTYNSLIAGA--------------------------TRNSLLS--CSLD-------LLD 101
            VVTY  L+                             T NSLL   C  D       LL 
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 102  EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
             M++ G  P+V SYN+++  L +  K  E   + + M+  +  P   TFN +++ +CK  
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172

Query: 162  YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITY 220
              D A  +F  +Q+ G  P LVTYN L+ GLCK+ R   A ++L+E+    G +P+ ITY
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232

Query: 221  TTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T++    K    +R YKL L++LS     G   D   Y  VI++  K   + EA + +E
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLS----DGLAPDDVTYSIVISSLCKWRFMDEANNVLE 1288

Query: 277  QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
             M+ +G     ++Y TLI+ +CK G L+ A  +L  +  +G   D  T +I ID L K G
Sbjct: 1289 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 1348

Query: 337  NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
             ++ A   LE M + G   +   YN ++         + A+++FE M       D+ TY+
Sbjct: 1349 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYT 1408

Query: 393  SMVHNLCKAK 402
            ++V +L   K
Sbjct: 1409 TLVGHLVDKK 1418



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 4/398 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD VTYN +I+   +    D    +L  M + G +P+V +YN+++ G  + + +  +L L
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L++M+  G PPDV SY ++++ L +L + DEA RV   MI     P   T+  +++G C+
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ + R + + G+ P  +TYN ++   C+   +  A  +L+ +  +G  P+AI 
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+TI+    +  K +   ++L  M R+G   D     T+I A  K   +  A + +   +
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                 D+V+Y+ LI+  CK  +L  A   LD M K     D  T+  ++DGLCK+  I 
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A L  + M   G   ++  Y+ ++    KD  +D A  + E M+    V D  TYS+++
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           + LCKA  +  A  +    L  G          ++DGL
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 5/424 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R G   ++   N L++   +   +   + +     E     D VTY++LI+G  R   + 
Sbjct: 119 RDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKIL 178

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + +L DEM   G+      + S++  L   G+  +A   F++M      P + T+N M+
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMI 237

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NGL K+   D+A+R+   +  +GF P + +YN ++ G CKA R+  A W+L+++   G  
Sbjct: 238 NGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCP 297

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ ++YTT++    +  +      ++  M ++G   +   Y T++  F ++G L  A + 
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M   G + + ++YN +++++C+   +E A+ +L  M + G   D   ++ +I G CK
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SME-VKDSFT 390
           AG ++ A   LE M + G   ++   + ++D L K   ID A  +      M+   D   
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           YS ++H LCKAKRLP A   L   +K+          +VVDGL  S    +A  +  ++R
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537

Query: 451 MAKI 454
            A +
Sbjct: 538 AAGV 541



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 201/397 (50%), Gaps = 18/397 (4%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            FCK + +E+A  ++   I+ G +P+VV+YN +I   C+      G  +L +M      PD
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +VT+N++I    +   +  + +L + + E G  P++ +YNSL+H L +  + D+A  + +
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217

Query: 137  DMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      +P   T+N +++GLCK++  D A ++F  +   G  P+ VTY+I+I  LCK 
Sbjct: 1218 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277

Query: 196  GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +  A  +L+ +  +G  P AITY T++    +       LEIL  +  KG   D   +
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337

Query: 256  CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
               I    K GRL++A + +E M+  G+  D V+YNTL+  +C     E A  L + M +
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397

Query: 316  QGFECDKYTHTILIDGLCKAGNIK-------------GARLHLEYMNKIGFDSNLEA--- 359
             G E D  T+T L+  L    + K             G +L+ E  +K+     +EA   
Sbjct: 1398 CGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVR 1457

Query: 360  YNC-IVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
              C IVD  GK G    A  VFE M+ ++   +S+M+
Sbjct: 1458 LGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAML 1494



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 207/444 (46%), Gaps = 48/444 (10%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LLN+ V    KA++  +A  +    I      D VTY+ LI  + +       Y + + M
Sbjct: 132 LLNVLV----KAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEM 187

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+      + S++ G       S ++    EM +   PPD  +YN++++ L +  + 
Sbjct: 188 NRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRL 246

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A R+ ++M+     P   ++N +L+G CK    +NAL +   +   G  P++V+Y  +
Sbjct: 247 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTV 306

Query: 189 IKGLCK-----------------------------------AGRLRTARWILKELGDSGH 213
           I GLCK                                    G L  A  +++++ + G+
Sbjct: 307 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 366

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PNAITY  IM    R    +   ++L  M + G   D   Y T+I+ F K G+L+EA D
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDG 331
            +EQM+  G + D+   +TLI+  CK   +++A  LL      G +C  D   ++ILI  
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL--RMSIGMDCAPDVVAYSILIHA 484

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           LCKA  +  A   L+ M K     ++  YN +VD L K  +I+ A  +F+ M     + D
Sbjct: 485 LCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPD 544

Query: 388 SFTYSSMVHNLCKAKRLPSASKLL 411
             TYS ++H+ CK   L SA K+L
Sbjct: 545 VVTYSIVIHSFCKDNNLDSAFKML 568



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 184/377 (48%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+   L+ A  ++      G  P+ +TYN ++  +C+    +  + +L  M + G  PD
Sbjct: 345 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD 404

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            + Y+++I+G  +   L  + DLL++M+  G  PDV   ++L+  L +    D A  + +
Sbjct: 405 AINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR 464

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
             I  D  P    ++I+++ LCK +    A      + K+   P++VTYN ++ GLCK+ 
Sbjct: 465 MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSR 524

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  +   +  +G  P+ +TY+ ++    ++       ++L  MK      D   Y 
Sbjct: 525 RINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYS 584

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G + +A D  ++M+  G   ++V+YNTLI+  CK  K+E A  +L+ M KQ
Sbjct: 585 ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  T+T LI+GLC A  ++ A   L  M   G   +   Y  ++  L K   ++  
Sbjct: 645 SCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELV 704

Query: 377 INVFESMEVKDSFTYSS 393
             + + ME  +   +++
Sbjct: 705 EQLLKEMEATEEGQWNA 721



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 182/369 (49%), Gaps = 42/369 (11%)

Query: 105  EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
            + G   D ++ N L+  L +L +P +A +V+++ +C   +P   TF I+++GLC+     
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIG 894

Query: 165  NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTI 223
             A  + + + +HG    ++ +N++IKGLC A +L +A  + KE+ +SG   P+  TY+TI
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954

Query: 224  MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +    ++ K      ++  M  KG + +   Y +++    K G+L EAT  +++M   G 
Sbjct: 955  VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 284  QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              +IV+YNT+I+ +CK G+++ AY LL+EM   G + +  T+T+L+D  CK G  + A  
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074

Query: 344  HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------------------- 384
             +E M + G+  NL  YN ++D   K  +++ A  +  SM                    
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134

Query: 385  --------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
                                V D  T+++++  +CK  R+  A +L     +SG      
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194

Query: 425  AQKAVVDGL 433
               ++V GL
Sbjct: 1195 TYNSLVHGL 1203



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 133/234 (56%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CKA RL +AE+ +   ++    PDVVTYN ++D  C+    +  + + +RMR 
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG+ PDVVTY+ +I    +++ L  +  +L+ M E    PDV +Y++L++ L + G  D+
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VFQ+M+     P   T+N +++GLCK    + A  M   ++K    P+ +TY  LI 
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           GLC A RL  A  +L+E+ D G  P+ +TY T+++   +    +L  ++L  M+
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 199/467 (42%), Gaps = 93/467 (19%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N  +   CKA ++ +   ++   +    +PD+VT+N +IDA C+    D  Y + N ++E
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G +P++VTYNSL+ G  ++     +  LL EM  + G  PD+ +YN+++  L +  + D
Sbjct: 1187 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 1246

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
             A ++F  M+   L P   T++I+++ LCK R+ D A  +   + K+GF P  +TY  LI
Sbjct: 1247 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 1306

Query: 190  KGLCKAG-----------------------------------RLRTARWILKELGDSGHA 214
             G CK G                                   RLR A  +L+ +  +G  
Sbjct: 1307 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 1366

Query: 215  PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY------------------- 255
            P+ +TY T++K        +  +++   M++ G   D   Y                   
Sbjct: 1367 PDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAE 1426

Query: 256  ---------------------------------CTVIAAFVKIGRLKEATDYMEQMVTDG 282
                                             C ++  F K G  ++A    E M    
Sbjct: 1427 VSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMD--- 1483

Query: 283  VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
             Q ++V ++ ++ +Y    + E A+ L   M  +G E D  T   L+   C AG +  A 
Sbjct: 1484 -QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAV 1542

Query: 343  LHLEYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 388
                 +++  G +  ++ ++C++D LG+ G ++ A ++   M  K S
Sbjct: 1543 DEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPCKPS 1589



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 135/269 (50%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  +   CKA  ++ A+ ++   I +   PDVV Y++LI A C+        + L+ M 
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +    PDVVTYNS++ G  ++  ++ +  L D M   G+ PDV +Y+ ++H   +    D
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLD 562

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++ + M      P   T++ ++NGLCK    D A  +F+ +   G  P LVTYN LI
Sbjct: 563 SAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI 622

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  ++  A  +L+ +      P++ITYT ++       + +    +L  MK KG  
Sbjct: 623 DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCL 682

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            D   Y T++ A  K   L+     +++M
Sbjct: 683 PDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 188/448 (41%), Gaps = 42/448 (9%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
             CKA  ++KA  +  + +  G  P++VTYN LID  C+    +    +L  MR+   +PD
Sbjct: 590  LCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPD 649

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             +TY  LI G    S L  +  +L EM + G  PD  +Y +L+  L +    +   ++ +
Sbjct: 650  SITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLK 709

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYT-----------------DNALRMFRGLQKHG-F 178
            +M        T       NG   +R+                   +  R+     + G F
Sbjct: 710  EM------EATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQF 763

Query: 179  VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI-------TYTTIMKCC--FR 229
             P    Y +           +  R IL       +A  A+       T T + K     R
Sbjct: 764  SPRPHQYRVTAVATQGGFHHKIVR-ILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVR 822

Query: 230  NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            N    LG     A  ++GY  D +    ++ A +++ R K+A       +      ++ +
Sbjct: 823  NGDAALGF-FDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFT 879

Query: 290  YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            +  LI+  C+ G +  AY LL EM + G   +   H ++I GLC A  +  A    + M 
Sbjct: 880  FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939

Query: 350  KIGF-DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
            + G    ++  Y+ IVD L K GK+D A  + E M  K    +  TYSS++H LCKA +L
Sbjct: 940  ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999

Query: 405  PSASKLLLSCLKSGVRILKSAQKAVVDG 432
              A+ LL    +SG          ++DG
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDG 1027



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 10/214 (4%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A  R GY  + F    ++   VK  +  +A D     +      D V+Y+TLI+ + + G
Sbjct: 116 AETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAG 175

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+  AY L DEM ++G +     H  ++ GLC AG    A LH   M+K     ++  YN
Sbjct: 176 KILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYN 234

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++ L K  ++D AI + E M       + F+Y++++H  CKA R+ +A  LL   +  
Sbjct: 235 TMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR 294

Query: 418 GVRILKSAQKAVVDGL-----RHSGCRREAKKIQ 446
           G      +   V++GL         CR   K IQ
Sbjct: 295 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 4/117 (3%)

Query: 41   DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-L 99
            +VV ++ ++  Y      +  + +   M   G+ PD VT+ SL+       LL  ++D  
Sbjct: 1486 NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEF 1545

Query: 100  LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +    + G+ P V  ++ ++  L +LG  +EA  +   M C    P  AT+N +L+ 
Sbjct: 1546 VSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPC---KPSAATWNCLLSA 1599


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 215/419 (51%), Gaps = 19/419 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R+++A  ++      G+ P+++TYNM+I+  C+    +    +L  M  
Sbjct: 242 NTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDR 301

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +PD VTYN+L+ G  +      +L L  EML  G+PPDV +Y SL++ + + G  + 
Sbjct: 302 KGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNR 361

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F  M    L P   T+  ++NG  +  + D A R++  + + GF P +VTYN L+ 
Sbjct: 362 AMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLN 421

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C +GR+  A  +L+ +   G +P+ ++Y+TI+    R ++     ++ + M  KG + 
Sbjct: 422 GHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSP 481

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I    +  RL EA D  ++M+   +  D  +Y +LIN YCKEG L  A  L 
Sbjct: 482 DAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLH 541

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEY----MNKIGFDSNLEAYN-- 361
           DEM K+GF  D  T+ +LI+GL K    + A+   L L Y     N I +D+ +E+ +  
Sbjct: 542 DEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDI 601

Query: 362 ------CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
                  ++      G ++ A  VFESM    +  +   Y+ ++H  C+   +  A KL
Sbjct: 602 EFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 222/452 (49%), Gaps = 11/452 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---QFVSFDAGY 62
           S+ + ++ V +    N +EKA  I+      G +P V++YN ++D+     + V F    
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF--AE 188

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M  +G+S +V +YN LI G      L   L   +EM      P+V +YN+++   
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +L + DEA ++ + M    L P   T+N+++NGLC+    +    +   + + GF P+ 
Sbjct: 249 CKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDG 308

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN L+ G CK G    A  +  E+  +G  P+ +TYT+++    +       +E    
Sbjct: 309 VTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  +G   +G  Y ++I  F + G + EA    ++M+  G    IV+YN L+N +C  G+
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 361
           +E A  LL  ME +G   D  +++ +I G C+   +  A +++ E + K G   +   Y+
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK-GVSPDAITYS 487

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L +  +++ A ++F+ M  K    D FTY+S+++  CK   L  A  L    +K 
Sbjct: 488 SLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKK 547

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           G          +++GL      REAK++  K+
Sbjct: 548 GFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 185/383 (48%), Gaps = 35/383 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   +++A  I  + IR G  P +VTYN L++ +C     +    +L  M   G+SPD
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+Y+++IAG  R   L  +  +  EM+E G+ PD  +Y+SL+  L +  + +EA  +FQ
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P   T+  ++NG CK    + AL +   + K GF+P+ VTYN+LI GL K  
Sbjct: 508 EMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQA 567

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R R A+ +L +L      PN ITY T+++ C             S ++ K          
Sbjct: 568 RTREAKRLLLKLFYDESIPNGITYDTLIESC-------------SDIEFKSVV------- 607

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F   G + EA    E M+    + +   YN +I+ +C++G +  A+ L  EM   
Sbjct: 608 ALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDF 667

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD-------SNLEAYNCIVDRLGK 369
           GF      HT+ I  L KA   +G     E +N +  D       S+ E    +V    K
Sbjct: 668 GF----IPHTVTIIALVKALYSEGMD---EQLNLVIRDILRSCKLSDAELSKALVQINHK 720

Query: 370 DGKIDHAINVFESMEVKDSFTYS 392
           +G ID   N+   M  KD F  S
Sbjct: 721 EGNIDAVFNLLTEM-AKDGFLPS 742



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 119/289 (41%), Gaps = 50/289 (17%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FC+   L++A  +  + +  GV PD +TY+ LI   C+    +    +   M    +
Sbjct: 455 IAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSL 514

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP----- 128
            PD  TY SLI G  +   L+ +L+L DEM++ G  PD  +YN L++ L +  +      
Sbjct: 515 LPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKR 574

Query: 129 ---------------------------------------------DEANRVFQDMICGDL 143
                                                        +EA++VF+ MI  + 
Sbjct: 575 LLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQ 634

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P  A +N++++G C++     A ++++ +   GF+P  VT   L+K L   G       
Sbjct: 635 KPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNL 694

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           +++++  S    +A     +++   +         +L+ M + G+   G
Sbjct: 695 VIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSG 743


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 212/398 (53%), Gaps = 4/398 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C    +++A  +  + +R G  PDV++Y+ +I+  C+  +      +L +M E G  P++
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL 232

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y ++I    +++L++ ++DLL EM++ GIPPDV +Y++++H    LG  +EA  +F +
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNE 292

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+  ++ P T TF I+++GLCK      A  +F  + K G  P   TYN L+ G C   +
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A+ +L  + D G AP   +Y  ++    + R+      +L  M  K  T D   Y T
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++    ++GR +EA +  ++M + G+  D+++Y+TL++  CK G L+ A  LL  M++  
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E D   + ILI+G+  AG ++ A+     +   G    +  Y  ++  L K+G  D A 
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            +F  ME    + +S +Y+ ++    + +   +A +L+
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLI 570



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 197/395 (49%), Gaps = 4/395 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C+ N +  A +++    +LG+ PD +T+N LI+  C          + N M 
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMV 189

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV++Y+++I G  ++   S +L LL +M E G  P++ +Y +++  L +    +
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVN 249

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M+   + P   T++ +L+G C   + + A  +F  +     +P  VT+ IL+
Sbjct: 250 DAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILV 309

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G +  AR + + +   G  PNA TY  +M     N +     ++L  M  KG  
Sbjct: 310 DGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  +I  + K  RL EA   + +M    +  D V+Y+TL+   C+ G+ + A  L
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM   G   D  T++ L+DGLCK G++  A   L+ M +   + ++  YN +++ +  
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489

Query: 370 DGKIDHAINVFESM---EVKDSF-TYSSMVHNLCK 400
            GK++ A  +F  +    ++ +  TY+ M+  L K
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLK 524



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 192/403 (47%), Gaps = 4/403 (0%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +S D       RM      P VV +   +    +    S  + L ++M   G+  +V+S 
Sbjct: 71  ISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSL 130

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++CL +L     A  V   M    + P   TFN ++NG C       A+ +F  + +
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G  P++++Y+ +I GLCK+G    A  +L+++ + G  PN + YTTI+    ++     
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            +++LS M  +G   D   Y T++  F  +G L EAT    +MV   V  + V++  L++
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CKEG +  A  + + M K+G E + YT+  L+DG C    +  A+  L+ M   G   
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            + +YN +++   K  ++D A ++   M  K    D+ TYS+++  LC+  R   A  L 
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                SG+         ++DGL   G   EA K+   ++ +KI
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 201/419 (47%), Gaps = 4/419 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV  +V + N+LI+  C+        ++L +M + GI PD +T+N+LI G      +  
Sbjct: 121 FGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKE 180

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L +EM+  G  PDV SY+++++ L + G    A ++ + M      P    +  +++
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID 240

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+   ++A+ +   +   G  P++VTY+ ++ G C  G L  A  +  E+      P
Sbjct: 241 SLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T+T ++    +         +  AM +KG   + + Y  ++  +    ++ EA   +
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G    + SYN LIN YCK  +L+ A  LL EM ++    D  T++ L+ GLC+ 
Sbjct: 361 DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV 420

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G  + A    + M   G   +L  Y+ ++D L K G +D A+ + +SM+      D   Y
Sbjct: 421 GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLY 480

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  +  A +L  A +L       G++        ++ GL   G   EA ++  K+ 
Sbjct: 481 NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKME 539



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 175/355 (49%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK   +  A  ++ + +  G+ PDVVTY+ ++  +C     +    + N M    + P
Sbjct: 241 SLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VT+  L+ G  +  ++S +  + + M + G  P+ ++YN+LM       + DEA +V 
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+     P   ++NI++NG CK R  D A  +   + +    P+ VTY+ L++GLC+ 
Sbjct: 361 DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV 420

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR + A  + KE+  SG  P+ +TY+T++    ++      L++L +M+      D   Y
Sbjct: 421 GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLY 480

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I      G+L+ A +   ++  DG+Q  I +Y  +I    KEG  + AY L  +ME 
Sbjct: 481 NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMED 540

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            GF  +  ++ ++I G  +  +   A   ++ M    F ++   +  ++D   +D
Sbjct: 541 DGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRD 595



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 149/295 (50%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    I V   CK   + +A  +     + G  P+  TYN L+D YC     D    +L
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M + G +P V +YN LI G  +   L  +  LL EM E  + PD  +Y++LM  L Q+
Sbjct: 361 DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV 420

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+P EA  +F++M    L P   T++ +L+GLCK+ + D AL++ + +Q+    P++V Y
Sbjct: 421 GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLY 480

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NILI+G+  AG+L  A+ +  +L   G  P   TYT ++K   +        E+   M+ 
Sbjct: 481 NILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMED 540

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
            G+  +   Y  +I  F++      A   +++MV      D  ++  L++L  ++
Sbjct: 541 DGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRD 595


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 221/440 (50%), Gaps = 5/440 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +FCK  +L     +    +  G+ PD + YN+LID Y +    D    +   M   G+ P
Sbjct: 17  SFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEP 76

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-NRV 134
            + TYNSL+    + + +  +++L   M E G  PDV +Y++++  L + GK  EA   +
Sbjct: 77  SIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML 136

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F  MI    +  T  +N ++NGLCK+   + A ++   +   G+VP+ +TYN ++ GLC+
Sbjct: 137 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCR 196

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G++  A+     +   G++P+ + Y  ++   ++  K    +++   +  KGY  D   
Sbjct: 197 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVT 256

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++    +   + EA +  ++MV  G   +  +Y+ +++ +C+  K++ A+ +L+EM 
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           K G   D  T+ IL+DGLCK   +  A      M   G   ++ +Y+ +++ L K  K+ 
Sbjct: 317 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 376

Query: 375 HAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  +F+ M     V D  T++ ++  LCKA +L  A  LL     SG      A   ++
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436

Query: 431 DGLRHSGCRREAKKIQSKIR 450
           +GLR  G   +A ++   ++
Sbjct: 437 NGLRKQGRHIQADRLTQAMK 456



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 194/377 (51%), Gaps = 1/377 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMR 69
           N  +  FCK  ++++A  +       G  PDVVTY+ +I   C+         +L ++M 
Sbjct: 82  NSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI 141

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G S + V YN+LI G  ++  +  +  LL+EM   G  PD  +YN+++  L ++GK  
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA + F  M     +P    +N +L+ L K   TD A+++F+ +   G++P+ VTYN ++
Sbjct: 202 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL +   +  A  + K++  SG APN  TY+ ++    R +K     ++L  M + G  
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  ++    K   + +A +    MV +G   DIVSY+ ++N  CK  K+  A +L
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D M ++    D  T  IL+DGLCKAG +  A+  L+ M   G   +  AYN +++ L K
Sbjct: 382 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRK 441

Query: 370 DGKIDHAINVFESMEVK 386
            G+   A  + ++M+ K
Sbjct: 442 QGRHIQADRLTQAMKEK 458



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 187/371 (50%), Gaps = 7/371 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MRE   SP+  T+  ++    +   L     L ++ML+ GI PD   YN L+    + G+
Sbjct: 1   MREC--SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR 58

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEANR++++M+   L P   T+N +LN  CK      A+ +F+ + + GF P++VTY+ 
Sbjct: 59  VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118

Query: 188 LIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +I GLCK G++  A   +  ++ + G + N + Y  ++    ++   +   ++L  M  K
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  D   Y T+++   ++G++ EA  + + M + G   D+V+YN L++   KEGK + A
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEA 238

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  ++  +G+  D  T+  ++ GL +  N+  A    + M   G   N   Y+ ++  
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             +  K+D A  V E M     V D  TY+ ++  LCK   +  A +L  + + +G    
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358

Query: 423 KSAQKAVVDGL 433
             +   V++GL
Sbjct: 359 IVSYSVVLNGL 369



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 158/316 (50%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   CK   +E+A  ++ +    G +PD +TYN ++   C+           
Sbjct: 148 NTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFF 207

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   G SPDVV YN L+    +      ++ L  +++  G  PD  +YNS++  L + 
Sbjct: 208 DSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARK 267

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
              DEA  +F+ M+     P  AT++I+L+G C+ +  D+A ++   + K G VP++VTY
Sbjct: 268 SNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTY 327

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NIL+ GLCK   +  A  +   + D+G AP+ ++Y+ ++    +  K      +   M  
Sbjct: 328 NILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIE 387

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +    D   +  ++    K G+L EA D ++QM   G   D V+YNTL+N   K+G+   
Sbjct: 388 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQ 447

Query: 306 AYLLLDEMEKQGFECD 321
           A  L   M+++GF  D
Sbjct: 448 ADRLTQAMKEKGFLSD 463



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 130/235 (55%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  + ++A  +  D I  G +PD VTYN ++    +  + D    +  +M  +G +P+  
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ +++G  R   +  +  +L+EM ++G  PDV +YN L+  L +    D+A+ +F  M
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P   +++++LNGLCK     +A  +F  + +   VP++VT+NIL+ GLCKAG+L
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             A+ +L ++  SG AP+ + Y T+M    +  ++     +  AMK KG+  D F
Sbjct: 411 DEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 227/444 (51%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A A++   ++LG  P++VT + L++ YC          ++++M  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ VT+N+LI G   ++  S ++ L+D M+  G  PD+ +Y  +++ L + G  D 
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M  G L P    +N +++GLCK ++ D+AL +F+ ++  G  P +VTY+ LI 
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    P+  T++ ++    +  K     ++   M ++    
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y ++I  F    RL EA    E MV+     D+V+YNTLI  +CK  ++E    + 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+ ILI GL +AG+   A+   + M   G   N+  YN ++D L K+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++        +TY+ M+  +CKA ++     L  +    GV+    A 
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G + EA  +  +++
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMK 563



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 191/377 (50%), Gaps = 3/377 (0%)

Query: 3   GKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           GKL   +L  N  +   CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +  
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L+ M E  I+PDV T+++LI    +   L  +  L DEM++  I P + +Y+SL++
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                 + DEA ++F+ M+     P   T+N ++ G CK +  +  + +FR + + G V 
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             VTYNILI+GL +AG    A+ I KE+   G  PN +TY T++    +N K +  + + 
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             ++R       + Y  +I    K G++++  D    +   GV+ D+V+YNT+I+ +C++
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G  E A  L  EM++ G   +   +  LI    + G+ + +   ++ M   GF  +    
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609

Query: 361 NCIVDRLGKDGKIDHAI 377
             + + L  DG++D + 
Sbjct: 610 GLVTNML-HDGRLDKSF 625



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V+ YN +ID  C++   D    +   M   GI P+VVTY+SLI+        S +  L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L +M+E  I PDV+++++L+    + GK  EA +++ +M+   + P   T++ ++NG C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 160 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +   D A +MF  +  KH F P++VTYN LIKG CK  R+     + +E+   G   N +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY  +++  F+     +  EI   M   G   +   Y T++    K G+L++A    E +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
               ++  I +YN +I   CK GK+E  + L   +  +G + D   +  +I G C+ G+ 
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           + A    + M + G   N   YN ++    +DG  + +  + + M
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 176/386 (45%), Gaps = 4/386 (1%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +  D    +   M ++   P ++ ++ L++   + +     + L ++M  +GIP + ++Y
Sbjct: 60  LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           + L++C  +  +   A  V   M+     P   T + +LNG C ++    A+ +   +  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G+ P  VT+N LI GL    +   A  ++  +   G  P+ +TY  ++    +     L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +L+ M++         Y T+I    K   + +A +  ++M T G++ ++V+Y++LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             C  G+   A  LL +M ++    D +T + LID   K G +  A    + M K   D 
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++  Y+ +++      ++D A  +FE M  K    D  TY++++   CK KR+    ++ 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSG 437
               + G+         ++ GL  +G
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAG 445



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 114/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  R+E+   +  +  + G++ + VTYN+LI    Q    D    I   M  
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+++TYN+L+ G  +N  L  ++ + + +    + P +++YN ++  + + GK ++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F ++    + P    +N M++G C+    + A  +F+ +++ G +P    YN LI+
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G A +A T   +       R  K  L++LS
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 133/301 (44%), Gaps = 32/301 (10%)

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NGL + +  D+A+ +F  + K    P ++ ++ L+  + K  +      + +++ + G  
Sbjct: 55  NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N  TY+ ++ C  R  +  L L +L  M + GY  +     +++  +    R+ EA   
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++QM   G Q + V++NTLI+      K   A  L+D M  +G + D  T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            G+     L    +NK+                 + GK++  +             Y+++
Sbjct: 234 RGDTD---LAFNLLNKM-----------------EQGKLEPGV-----------LIYNTI 262

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +  LCK K +  A  L       G+R       +++  L + G   +A ++ S +   KI
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 455 S 455
           +
Sbjct: 323 N 323


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 227/444 (51%), Gaps = 4/444 (0%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            +I +  FC+ ++L  A A++   ++LG  P++VT + L++ YC          ++++M  
Sbjct: 734  SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G  P+ VT+N+LI G   ++  S ++ L+D M+  G  PD+ +Y  +++ L + G  D 
Sbjct: 794  TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A  +   M  G L P    +N +++GLCK ++ D+AL +F+ ++  G  P +VTY+ LI 
Sbjct: 854  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             LC  GR   A  +L ++ +    P+  T++ ++    +  K     ++   M ++    
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                Y ++I  F    RL EA    E MV+     D+V+YNTLI  +CK  ++E    + 
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 311  DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             EM ++G   +  T+ ILI GL +AG+   A+   + M   G   N+  YN ++D L K+
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 371  GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            GK++ A+ VFE ++        +TY+ M+  +CKA ++     L  +    GV+    A 
Sbjct: 1094 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 1153

Query: 427  KAVVDGLRHSGCRREAKKIQSKIR 450
              ++ G    G + EA  +  +++
Sbjct: 1154 NTMISGFCRKGSKEEADALFKEMK 1177



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 170/320 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ NR+  A +++   + +G  PD+V YN +ID+ C+    +  +     +   GI P+
Sbjct: 268 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 327

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +L+ G   +S  S +  LL +M++  I P+V +Y++L+    + GK  EA  +F+
Sbjct: 328 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 387

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T++ ++NGLC +   D A +MF  +   G + ++V+YN LI G CKA 
Sbjct: 388 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 447

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+        E  S M   G + D + Y 
Sbjct: 448 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G L++A    E M    + LDIV+Y T+I   CK GK+E A+ L   +  +
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567

Query: 317 GFECDKYTHTILIDGLCKAG 336
           G + D  T+T ++ GLC  G
Sbjct: 568 GLKPDIVTYTTMMSGLCTKG 587



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 205/386 (53%), Gaps = 9/386 (2%)

Query: 22  RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +L+K + +I  G +   LG+  D+ T+N++I+ +C         +IL +M + G  PD V
Sbjct: 200 KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 259

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T  SL+ G  R + +S ++ L+D+M+E+G  PD+ +YN+++  L +  + ++A   F+++
Sbjct: 260 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 319

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P   T+  ++NGLC +    +A R+   + K    P ++TY+ L+    K G++
Sbjct: 320 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 379

Query: 199 RTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
             A+ + +E+      P+ +TY++++   C  +R  +   ++   M  KG   D   Y T
Sbjct: 380 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN-QMFDLMVSKGCLADVVSYNT 438

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  F K  R+++      +M   G+  + V+YNTLI  + + G ++ A     +M+  G
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D +T+ IL+ GLC  G ++ A +  E M K   D ++  Y  ++  + K GK++ A 
Sbjct: 499 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 558

Query: 378 NVFESMEVK----DSFTYSSMVHNLC 399
           ++F S+ +K    D  TY++M+  LC
Sbjct: 559 SLFCSLSLKGLKPDIVTYTTMMSGLC 584



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 191/376 (50%), Gaps = 3/376 (0%)

Query: 3    GKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
            GKL   +L  N  +   CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +  
Sbjct: 864  GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 923

Query: 61   GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
               +L+ M E  I+PDV T+++LI    +   L  +  L DEM++  I P + +Y+SL++
Sbjct: 924  ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 983

Query: 121  CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                  + DEA ++F+ M+     P   T+N ++ G CK +  +  + +FR + + G V 
Sbjct: 984  GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 1043

Query: 181  ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
              VTYNILI+GL +AG    A+ I KE+   G  PN +TY T++    +N K +  + + 
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 1103

Query: 241  SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
              ++R       + Y  +I    K G++++  D    +   GV+ D+V+YNT+I+ +C++
Sbjct: 1104 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 1163

Query: 301  GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            G  E A  L  EM++ G   +   +  LI    + G+ + +   ++ M   GF  +    
Sbjct: 1164 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 1223

Query: 361  NCIVDRLGKDGKIDHA 376
              + + L  DG++D +
Sbjct: 1224 GLVTNML-HDGRLDKS 1238



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 175/332 (52%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC   ++  A +I+   ++LG  PD VT   L++ +C+        +++++M 
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD+V YN++I    +   ++ + D   E+   GI P+V +Y +L++ L    +  
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+  DMI   +TP   T++ +L+   KN     A  +F  + +    P++VTY+ LI
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC   R+  A  +   +   G   + ++Y T++    + ++ + G+++   M ++G  
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F + G + +A ++  QM   G+  DI +YN L+   C  G+LE A ++
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            ++M+K+  + D  T+T +I G+CK G ++ A
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 40   PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
            P V+ YN +ID  C++   D    +   M   GI P+VVTY+SLI+        S +  L
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 100  LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            L +M+E  I PDV+++++L+    + GK  EA +++ +M+   + P   T++ ++NG C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 160  NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            +   D A +MF  +  KH F P++VTYN LIKG CK  R+     + +E+   G   N +
Sbjct: 988  HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046

Query: 219  TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            TY  +++  F+     +  EI   M   G   +   Y T++    K G+L++A    E +
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106

Query: 279  VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
                ++  I +YN +I   CK GK+E  + L   +  +G + D   +  +I G C+ G+ 
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166

Query: 339  KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            + A    + M + G   N   YN ++    +DG  + +  + + M
Sbjct: 1167 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 191/415 (46%), Gaps = 39/415 (9%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL---FQ------- 124
           P +V +N L++   +       + L  +M  +GI  D++++N +++C    FQ       
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 125 LGK-------PDEA------------NRV------FQDMICGDLTPCTATFNIMLNGLCK 159
           LGK       PD              NRV         M+     P    +N +++ LCK
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +  ++A   F+ +++ G  P +VTY  L+ GLC + R   A  +L ++      PN IT
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    +N K     E+   M R     D   Y ++I       R+ EA    + MV
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   D+VSYNTLIN +CK  ++E    L  EM ++G   +  T+  LI G  +AG++ 
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A+     M+  G   ++  YN ++  L  +G+++ A+ +FE M+ +    D  TY++++
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             +CK  ++  A  L  S    G++        ++ GL   G   E + + +K++
Sbjct: 546 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 219/512 (42%), Gaps = 63/512 (12%)

Query: 1   MFGKLSTRLL-------NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F ++S R L       N  +  F +A  ++KA+         G+ PD+ TYN+L+   C
Sbjct: 455 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 514

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                +    I   M++  +  D+VTY ++I G  +   +  +  L   +   G+ PD+ 
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 574

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMI--------C----GDLTPCTATFNIML------- 154
           +Y ++M  L   G   E   ++  M         C    GD+T        ML       
Sbjct: 575 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 634

Query: 155 ------NGLCKNRYT---------------------------DNALRMFRGLQKHGFVPE 181
                 +G+CK   +                           D+A+ +F  + K    P 
Sbjct: 635 LLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS 694

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           ++ ++ L+  + K  +      + +++ + G   N  TY+ ++ C  R  +  L L +L 
Sbjct: 695 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 754

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M + GY  +     +++  +    R+ EA   ++QM   G Q + V++NTLI+      
Sbjct: 755 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 814

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K   A  L+D M  +G + D  T+ ++++GLCK G+   A   L  M +   +  +  YN
Sbjct: 815 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 874

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            I+D L K   +D A+N+F+ ME K    +  TYSS++  LC   R   AS+LL   ++ 
Sbjct: 875 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +        A++D     G   EA+K+  ++
Sbjct: 935 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 176/386 (45%), Gaps = 4/386 (1%)

Query: 56   VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
            +  D    +   M ++   P ++ ++ L++   + +     + L ++M  +GIP + ++Y
Sbjct: 674  LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733

Query: 116  NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            + L++C  +  +   A  V   M+     P   T + +LNG C ++    A+ +   +  
Sbjct: 734  SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793

Query: 176  HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
             G+ P  VT+N LI GL    +   A  ++  +   G  P+ +TY  ++    +     L
Sbjct: 794  TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 236  GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
               +L+ M++         Y T+I    K   + +A +  ++M T G++ ++V+Y++LI+
Sbjct: 854  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 296  LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
              C  G+   A  LL +M ++    D +T + LID   K G +  A    + M K   D 
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 356  NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            ++  Y+ +++      ++D A  +FE M  K    D  TY++++   CK KR+    ++ 
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 412  LSCLKSGVRILKSAQKAVVDGLRHSG 437
                + G+         ++ GL  +G
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAG 1059



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 160/333 (48%), Gaps = 4/333 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K ++A  +F DM+     P    FN +L+ + K +  D  + + + ++  G   +L T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C   ++  A  IL ++   G+ P+ +T  +++    R  +    + ++  M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  D   Y  +I +  K  R+ +A D+ +++   G++ ++V+Y  L+N  C   +   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +M K+    +  T++ L+D   K G +  A+   E M ++  D ++  Y+ +++ 
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L    +ID A  +F+ M  K    D  +Y+++++  CKAKR+    KL     + G+   
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                 ++ G   +G   +A++  S++    IS
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 114/231 (49%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N  +  FCK  R+E+   +  +  + G++ + VTYN+LI    Q    D    I   M  
Sbjct: 1014 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 1073

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G+ P+++TYN+L+ G  +N  L  ++ + + +    + P +++YN ++  + + GK ++
Sbjct: 1074 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               +F ++    + P    +N M++G C+    + A  +F+ +++ G +P    YN LI+
Sbjct: 1134 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 1193

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
               + G    +  ++KE+   G A +A T   +       R  K  L++LS
Sbjct: 1194 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 1244


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 232/444 (52%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+A  L++A  +    +  G++PD+ TY++LI+ +C          +L  M +
Sbjct: 254 NVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 313

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ +TYN+LI G  R   +  +  + DEM+  GI  ++  +N+L++ + + GK ++
Sbjct: 314 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 373

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + Q+M+   + P + T+++++ G C+ +    A  +   ++K    P ++TY+++I 
Sbjct: 374 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 433

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L+    IL+E+  +G  PNA+ YTT+M    +  + +    IL  M+ +G   
Sbjct: 434 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 493

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F K  R++EA  Y+ +M+   ++ +  +Y   I+ Y K G++E A    
Sbjct: 494 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 553

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM   G   +   +T LI+G CK GN+  A     ++       +++ Y+ ++  L ++
Sbjct: 554 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 613

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+  A  +F  ++ K    ++FTY+S++   CK   +  AS+LL      G+       
Sbjct: 614 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 673

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++DGL  +G    AK +   I 
Sbjct: 674 NILIDGLCKAGEIERAKNLFDDIE 697



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 201/402 (50%), Gaps = 4/402 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ V ++ML+D+Y +         +    +     P +++ NSL+    + + +     +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            D M    + PDV++Y +++    ++G   +A RV  +M     +P   T+N+++ GLC+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            R  D A+ + R +   G VP+L TY+ILI G C   R R A+ +L E+ D G  P  IT
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R    +    I   M   G   +   + T++    K G++++A + M++M+
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D  +Y+ LI  +C+   +  A+ LLDEM+K+       T++++I+GLC+ GN++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
           G    L  M   G   N   Y  ++    K+G+++ +  + E M     + D F Y+S++
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              CKAKR+  A   L+  L+  +R       A +DG   +G
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 544



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 212/419 (50%), Gaps = 8/419 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           VLPDV TY  +I A+C+  +      +L  M E G SP++VTYN +I G  R  LL  ++
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           +L   M++ G+ PD+++Y+ L++      +  EA  +  +MI   L P   T+N +++G 
Sbjct: 271 ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGF 330

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            +    + A R+   +   G    L+ +N L+ G+CKAG++  A  I++E+ + G  P++
Sbjct: 331 MRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDS 390

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY+ +++   R +      E+L  MK++        Y  +I    + G L+     + +
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE 450

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV +G++ + V Y TL+  + KEG++E + ++L+ M +QG   D + +  LI G CKA  
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 510

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSS 393
           ++ AR +L  M +     N   Y   +D   K G+++ A   F  M     + +   Y++
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIR 450
           ++   CK   +  A  +    L    R+L+  Q    ++ GL  +G   EA  I S+++
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSR--RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 219/451 (48%), Gaps = 18/451 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + KA  +E A+    + +  GVLP+V  Y  LI+ +C+  +    +++   +    +  D
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY+ LI G +RN  +  +  +  E+ E G+ P+ ++YNSL+    + G  D+A+++ +
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T+NI+++GLCK    + A  +F  ++  G  P  VTY  ++ G CK+ 
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +L+E+   G  P+A  Y  I+  C +  K++  L++   M  KG+      + 
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFN 778

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K G+L+EA   +E+M+      + V+Y +LI+  CK G +  A  L  EM+++
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                  T+T L+ G    GN+       E M   G + +   Y  ++D   ++G     
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG----- 893

Query: 377 INVFESMEVKDSF----------TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            NV E+ ++KD             Y +++  LCK +      KLL    +SG R+     
Sbjct: 894 -NVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTC 952

Query: 427 KAVVDGLRHSGCRREAKKI-QSKIRMAKISH 456
             +  G + +G   EA ++ +S ++   +S+
Sbjct: 953 SVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 983



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 215/448 (47%), Gaps = 7/448 (1%)

Query: 4   KLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           KL+  +L  ++ +   C+   L+   AI+ + +  G+ P+ V Y  L+ A+ +    +  
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             IL RMRE GI PDV  YNSLI G  +   +  +   L EMLE  + P+  +Y + +  
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             + G+ + A+R F +M+   + P    +  ++ G CK      A  +FR +     + +
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + TY++LI GL + G++  A  I  EL + G  PNA TY +++    +        ++L 
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M  KG   D   Y  +I    K G ++ A +  + +   G+  + V+Y  +++ YCK  
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
              AA+ LL+EM  +G   D + + ++++  CK    + A    + M + GF S + ++N
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFN 778

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++   K GK+  A ++ E M     + +  TY+S++ + CKA  +  A +L L   + 
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKI 445
            V        +++ G  + G   E   +
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSAL 866



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 182/373 (48%), Gaps = 1/373 (0%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N  +   CK   ++KA  ++ +    G+ PD+VTYN+LID  C+    +    + + +  
Sbjct: 639  NSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEG 698

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G++P+ VTY +++ G  ++   + +  LL+EML  G+PPD + YN +++   +  K ++
Sbjct: 699  RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEK 758

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A  +FQ+M+       T +FN ++ G CK+     A  +   + +  F+P  VTY  LI 
Sbjct: 759  ALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 817

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              CKAG +  A+ +  E+ +    P A TYT+++              +   M  KG   
Sbjct: 818  HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 877

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
            D   Y  +I A+ + G + EA    ++++  G+ + + +Y+ LI   CK+ +      LL
Sbjct: 878  DKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLL 937

Query: 311  DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +E+ + GF     T +++  G   AGN+  A   L  M K G+ SN  +   +VD     
Sbjct: 938  NEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNG 997

Query: 371  GKIDHAINVFESM 383
               + + N+ + M
Sbjct: 998  ANSEDSDNLLKQM 1010



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 99/217 (45%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  ST   N  +  +CK+ +L++A  ++ + I    +P+ VTY  LID  C+        
Sbjct: 770 GFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 829

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M+E  + P   TY SL+ G      +S    L +EM+  GI PD  +Y  ++   
Sbjct: 830 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 889

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   EA ++  +++   +    A ++ ++  LCK       L++   + + GF   L
Sbjct: 890 CREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGL 949

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            T +++ +G   AG +  A  +L+ +   G   N  +
Sbjct: 950 PTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTS 986


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 215/427 (50%), Gaps = 4/427 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   C+A  +++A  +       G+LPD   Y  LID +C+      G ++L+ M  
Sbjct: 271 SVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT 330

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD V Y +LI G  + S +  +  + +EM    I  + ++Y +L+H L ++G  ++
Sbjct: 331 MGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEK 390

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M    + P   T+N ++ G  K +  + A  +   ++K            ++ 
Sbjct: 391 AEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVN 450

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G L  A  + +E+   G  PN + YTTI+K   +  +++  ++IL  MK +G + 
Sbjct: 451 GLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSP 510

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y TVI  F K G+++E   Y+ +M+  G++ ++ +Y   I+ YC+ G+++AA    
Sbjct: 511 DVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSF 570

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM   G   +    T LIDG CK GN   A      M   G   +++ ++ ++  L K+
Sbjct: 571 IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+  A+ VF  +     V D FTY+S++ NLCK   L +A +L     K G+       
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 427 KAVVDGL 433
            A+++GL
Sbjct: 691 NALINGL 697



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 202/429 (47%), Gaps = 5/429 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C    L +A  +  + I  G+ P++V Y  ++    +   F+    IL  M++ G+SPD
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V  YN++I G  +   +      L EM+  G+ P+V++Y + +H   + G+   A R F 
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI 571

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P       +++G CK+  T  A   FR +   G +P++ T+++LI GL K G
Sbjct: 572 EMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNG 631

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L+ A  +  EL D G  P+  TYT+++    +    K   E+   M +KG   +   Y 
Sbjct: 632 KLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYN 691

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K+G + +A +  + +   G+  + V+Y+T+I  YCK   L  A+ L   M+  
Sbjct: 692 ALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLV 751

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D + +  LIDG CKAGN + A      M + G  S   A+N ++D   K GK+  A
Sbjct: 752 GVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST-PAFNALIDGFFKLGKLIEA 810

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             + E M       +  TY+ ++   C    +  A +L +   K  V        +++ G
Sbjct: 811 YQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHG 870

Query: 433 LRHSGCRRE 441
               G R E
Sbjct: 871 YNRIGRRSE 879



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 213/451 (47%), Gaps = 15/451 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+T      +   CK   LEKAE +  +   +G+ PD+ TYN LI+ Y +  + +  Y 
Sbjct: 369 KLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYE 428

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSC-----SLDLLDEMLEMGIPPDVWSYNSL 118
           +L  +++  +     T N+ + GA  N L  C     + +L  EM+  G+ P++  Y ++
Sbjct: 429 LLIEIKKENL-----TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTI 483

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +  L + G+ +EA ++   M    L+P    +N ++ G CK    +        +   G 
Sbjct: 484 VKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P + TY   I G C+AG ++ A     E+ DSG APN +  T ++    ++        
Sbjct: 544 KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFA 603

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
               M  +G   D   +  +I    K G+L+EA     +++  G+  D+ +Y +LI+  C
Sbjct: 604 KFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLC 663

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEG L+AA+ L D+M K+G   +  T+  LI+GLCK G I  AR   + + + G   N  
Sbjct: 664 KEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSV 723

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y+ I+    K   +  A  +F  M++     DSF Y +++   CKA     A  L L  
Sbjct: 724 TYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++ G+     A  A++DG    G   EA ++
Sbjct: 784 VEEGIAS-TPAFNALIDGFFKLGKLIEAYQL 813



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 214/480 (44%), Gaps = 41/480 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA ++E+ ++ +++ I  G+ P+V TY   I  YC+     A       M +
Sbjct: 516 NTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLD 575

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI+P+ V    LI G  ++   + +      ML+ G+ PDV +++ L+H L + GK  E
Sbjct: 576 SGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQE 635

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF +++   L P   T+  +++ LCK      A  +   + K G  P +VTYN LI 
Sbjct: 636 AMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  AR +   + + G A N++TY+TI+    ++       ++   MK  G   
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F YC +I    K G  ++A      MV +G+     ++N LI+ + K GKL  AY L+
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLV 814

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++M       +  T+TILI+  C  GNIK A      M K     N+  Y  ++    + 
Sbjct: 815 EDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRI 874

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVH------------------------------ 396
           G+     ++F+ M  +    D   +S MV                               
Sbjct: 875 GRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLY 934

Query: 397 -----NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKIR 450
                 LCK   L    K+L    K G ++  +    +V     +G   EA ++ +S +R
Sbjct: 935 TILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 163/342 (47%), Gaps = 4/342 (1%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
            I PDV++Y +L++   ++GK +E   V  DM      P   T+++++ GLC+    D A
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L + R +   G +P+   Y  LI G C+  R    + +L E+   G  P+ + YT ++  
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +        ++   M  +    + F Y  +I    KIG L++A D   +M   G++ D
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPD 406

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           I +YN LI  Y K   +E AY LL E++K+    + Y    +++GLC  G++  A    +
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M   G   N+  Y  IV  L K+G+ + AI +   M+ +    D F Y++++   CKA 
Sbjct: 467 EMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG 526

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           ++      L+  +  G++       A + G   +G  + A++
Sbjct: 527 KMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 99/206 (48%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  ST   N  +  F K  +L +A  ++ D +   + P+ VTY +LI+ +C   +     
Sbjct: 787 GIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAE 846

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M++  + P+V+TY SL+ G  R    S    L DEM+  GI PD  +++ ++   
Sbjct: 847 QLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAH 906

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   +A ++  DM+   +  C   + I+++ LCK+      L++   ++K G    L
Sbjct: 907 LKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSL 966

Query: 183 VTYNILIKGLCKAGRLRTARWILKEL 208
            T   L+    +AGR   A  +L+ +
Sbjct: 967 ATCGTLVCCFHRAGRTDEALRVLESM 992


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 219/433 (50%), Gaps = 1/433 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK + +++A  ++ D +  G +PD VTY  LI+  C     +    + N  + 
Sbjct: 297 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 356

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD+V YNSL+ G     L+  +L +++EM E G  PD+ +YN +++ L ++G   +
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 416

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V  D I     P   TFN +++G CK    D+AL++   + ++G  P+ +TYN ++ 
Sbjct: 417 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG++       +E+   G  PN ITY  +++   R+ K +   +++  M ++G   
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 536

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I  F + G L+ A    +++   G      ++NTLI  +  +  +  A  + 
Sbjct: 537 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 596

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   D YT+ +LIDG CK  N+  A +HL  M K GF  ++  +  +++ L  +
Sbjct: 597 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 656

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            ++  A+ +   M VK       +   L   K+  +A K+L+  L     I     + + 
Sbjct: 657 HRVFQAVGIIHIM-VKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTYEVLH 715

Query: 431 DGLRHSGCRREAK 443
           +G+R +   R+ +
Sbjct: 716 EGVRDNKLTRKHR 728



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 205/412 (49%), Gaps = 5/412 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+A RL +A   ++DG+R   +PDVVTYN LI   C+          L RM  
Sbjct: 228 NIWIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 286

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TYN++I G  + S++  + +LL + +  G  PD  +Y SL++ L   G  + 
Sbjct: 287 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +     + P    +N ++ GLC      +AL++   + + G  P++ TYNI+I 
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  A  ++ +    G+ P+  T+ T++    +  K    L+++  M   G   
Sbjct: 407 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 466

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V+    K G++ E  +  ++M+  G   + ++YN LI  +C+  K+E A  ++
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M ++G   D  +   LI G C+ G+++GA L  + + + G+ +  + +N ++      
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +  A  +F+ M  K    DS+TY  ++   CK   +  A   L+  +K G
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 638



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 208/445 (46%), Gaps = 36/445 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS----------------- 82
           P    YN ++DA       D  + +  RM  AG+SPD+ T+                   
Sbjct: 86  PAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRL 145

Query: 83  LIAGATRNSLLSCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           L A   R ++  C++               L D+ML   + P++ ++N ++H L + G  
Sbjct: 146 LRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  +   +I   ++    T+NI + GLC+      A+R+  G++ +  VP++VTYN L
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTL 264

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+GLCK    + A   L+ + + G  P+  TY TI+    +    +   E+L     KG+
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 324

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   YC++I      G ++ A +   +    G++ DIV YN+L+   C +G +  A  
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +++EM ++G   D  T+ I+I+GLCK GNI  A + +      G+  ++  +N ++D   
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  K+D A+ + E M       D+ TY+S+++ LCKA ++   ++     +  G      
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 504

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKI 449
               +++    S    EA K+  K+
Sbjct: 505 TYNILIENFCRSNKMEEASKVIVKM 529



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 14/382 (3%)

Query: 51  AYCQFVS--FDAGYT-----ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDE 102
           AYC  V   +  G+T     + ++M    + P++  +N ++ A   R  +L   L LL +
Sbjct: 156 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGK 214

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +++ G+  ++++YN  +  L + G+  EA R+   M    + P   T+N ++ GLCK   
Sbjct: 215 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSM 273

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+   R +   G +P+  TYN +I G CK   ++ A  +LK+    G  P+ +TY +
Sbjct: 274 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 333

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++         +  LE+ +  + KG   D   Y +++      G +  A   M +M  +G
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DI +YN +IN  CK G +  A +++++   +G+  D +T   LIDG CK   +  A 
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             +E M + G   +   YN +++ L K GK++     F+ M +K    +  TY+ ++ N 
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513

Query: 399 CKAKRLPSASKLLLSCLKSGVR 420
           C++ ++  ASK+++   + G+ 
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLH 535



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 181/441 (41%), Gaps = 72/441 (16%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +R+  A I P    Y + I    R   L  ++D  + M     PP   +YN++M  L   
Sbjct: 45  SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 101

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------ 179
              D+A++V+  M+   ++P   T  I L   C       ALR+ R L   G V      
Sbjct: 102 AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVV 161

Query: 180 -------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                                    P L  +N ++  LCK G +  A  +L ++   G +
Sbjct: 162 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 221

Query: 215 ----------------------------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                                             P+ +TY T+++   +    +  +  L
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 281

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G   D F Y T+I  + KI  ++EAT+ ++  V  G   D V+Y +LIN  C E
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G +E A  L +E + +G + D   +  L+ GLC  G I  A   +  M + G   +++ Y
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++ L K G I  A  V     +K    D FT+++++   CK  +L SA +L+    +
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461

Query: 417 SGVRILKSAQKAVVDGLRHSG 437
            G+        +V++GL  +G
Sbjct: 462 YGIAPDTITYNSVLNGLCKAG 482


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 219/443 (49%), Gaps = 4/443 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +L +A  +++D    G+LP+  T+N+L+  YC+         +++ M +
Sbjct: 251 NTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ 310

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TYN LI G  ++  +  +  L DEM  + + PDV +YN+L++  F      +
Sbjct: 311 NNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK 370

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +   M    + P   T+N+++    K    DNA    R +++ GF P+ VT+N LI 
Sbjct: 371 GFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLIN 430

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAGRL  A  ++ E+   G   N++T  TI+      RK     ++LS+  ++GY  
Sbjct: 431 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 490

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  + K G+  EA    ++M    +   I++YNT+I   C  GK + +   L
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ + G   D+ T+  +I G C+ G ++ A      M K  F  +L   N ++  L  +
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A+ +F +   K    D+ TY++++  LCK  R   A  LL    +  +       
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++  L  +G  +EA++  S+I
Sbjct: 671 NAILSALADAGRMKEAEEFMSRI 693



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 229/448 (51%), Gaps = 7/448 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TIL 65
           +L+  +  +   NR   A  I     RL + P+++T N LI+A  ++ S  + Y    I 
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIF 200

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + + + G+  +  T+N LI G    + LS ++ L+ +M +    PD  SYN+++  L + 
Sbjct: 201 SDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKK 260

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK +EA  +  DM    L P   TFNI+++G CK  +   A ++   + ++  +P++ TY
Sbjct: 261 GKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTY 320

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+LI GLCK G++  A  +  E+ +    P+ +TY T++  CF       G E++  M+ 
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEG 380

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG   +   Y  V+  +VK G++  A + + +M   G   D V++NTLIN YCK G+L  
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSE 440

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+ ++DEM ++G + +  T   ++  LC    +  A   L   +K G+  +  +Y  ++ 
Sbjct: 441 AFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM 500

Query: 366 RLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              KDGK   A+ +++ M+ K+      TY++M+  LC + +   +   L   L+SG+  
Sbjct: 501 GYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP 560

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++    ++ G    G   +A +  +K+
Sbjct: 561 DETTYNTIILGYCREGQVEKAFQFHNKM 588



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 166/348 (47%), Gaps = 23/348 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CKA RL +A  ++ +  R G+  + VT N ++   C     D  Y +L+   
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G   D V+Y +LI G  ++     ++ L DEM E  I P + +YN+++  L   GK D
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           ++     +++   L P   T+N ++ G C+    + A +    + K  F P+L T NIL+
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +GLC  G L  A  +       G A +A+TY TI+    +  +++   ++L+ M+ K   
Sbjct: 605 RGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLG 664

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD----------------------- 286
            D + Y  +++A    GR+KEA ++M ++V  G   D                       
Sbjct: 665 PDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPN 724

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            V+++  IN  C +GK + A  ++ E  ++G    K T+  L++GL K
Sbjct: 725 SVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/410 (31%), Positives = 208/410 (50%), Gaps = 12/410 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR-EAGISPDV 77
           K  R+++A  +  +    G  P VVTYN +ID  C+    +   T+ + M    G  P V
Sbjct: 42  KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTV 101

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY++LI G  R+  +     LL+EM   G  P+  +YN+L++ L   G+  EA  + + 
Sbjct: 102 VTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQ 161

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALR----MFRGLQKHGFVPELVTYNILIKGLC 193
           M      P   TF +++ GLCK    + A R    MF  + + G  P+++T+N ++ GLC
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLC 219

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  R+  A  + K   + G  PN +TY+T++    +  K    L++L+ M   G   +  
Sbjct: 220 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 279

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y TV+   +K+GR+++A   + QM   G   D V+YNTLI+ + K  +L  A  LL EM
Sbjct: 280 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + GF     T+T L  GLC++G    A   L+YM   G   N   Y+ IVD L K G++
Sbjct: 340 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 399

Query: 374 DHAINVFESMEVKD-----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             A+  FE M   +        YS+++  LCKA ++  A + L   +++G
Sbjct: 400 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAG 449



 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 229/484 (47%), Gaps = 49/484 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +   CK  R+E A  +  D  I  G  P VVTY+ LID  C+    D G  +L  M 
Sbjct: 69  NTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMA 128

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G +P+ VTYN+L+           +  LL++M   G PP++ ++  ++  L + G+ +
Sbjct: 129 GRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188

Query: 130 EANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            A RV  +M  I   L+P   TFN +L+GLCK +   +A  +F+   + G  P +VTY+ 
Sbjct: 189 AAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL K  ++  A  +L ++ + G   N +TY+T++    +  + +  + +L  M+  G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y T+I  F K  RL+EA   + +M+  G    +V+Y TL +  C+ G+ + A 
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS----NLEAYNCI 363
            +LD M  +G   +  T++ ++DGLCKAG +  A   L Y  K+  D     ++ AY+ +
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA---LGYFEKMARDEVVAPHVIAYSAL 425

Query: 364 VDRLGKDGKIDHAINVFESME--------------------------------------- 384
           +D L K GKID A    E M                                        
Sbjct: 426 IDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGC 485

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           V D  TY+++V  LC+A R+  A  L       G+   +S ++ ++ GL       +AK+
Sbjct: 486 VPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545

Query: 445 IQSK 448
           IQ +
Sbjct: 546 IQDE 549



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 210/452 (46%), Gaps = 44/452 (9%)

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
           +ID  C+    D   T+  +M +  I PDVVTY +LI G  +   +  + DL +E    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTD-- 164
             P V +YN+++  L + G+ + A  ++ DM I     P   T++ +++GLC++   D  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 165 ---------------------------------NALRMFRGLQKHGFVPELVTYNILIKG 191
                                             A  +   +  +G  PEL+T+ ++IKG
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 192 LCKAGRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           LCK G +  A  ++ E+   +SG +P+ IT+ +++    + ++      +      +G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I    K+ ++ EA   + +MV  G + + V+Y+T+++   K G++E A ++
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L +M   G   D  T+  LIDG  K   ++ A   L  M + GF  ++  Y  +   L +
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS- 424
            G+ D A+ + + M  +    ++ TYSS+V  LCKA R+  A        +  V      
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 425 AQKAVVDGLRHSGCRREAKK-IQSKIRMAKIS 455
           A  A++DGL  +G   EA + ++  IR  +I 
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIP 452


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 214/414 (51%), Gaps = 7/414 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV+ YN ++  YC     DA   ++  M    + PD  TYN+LI G       + +L +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEML     PDV +Y  L+    +     +A ++  +M     TP   T+N+++NG+C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D+A+   + L  +G  P  V+YNI++KGLC A R   A  ++ E+G  G  PN +T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    R    +  LE+L  + + G T +   Y  ++ AF K  ++ +A  +++ MV
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   DIVSYNTL+   C+ G+++ A  LL +++ +G      ++  +IDGL KAG  K
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMV 395
            A   L  M   G   ++  Y+ I   L ++ +I+ AI  F   + M ++ ++  Y++++
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 480

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +   SA  L    + +G    +S    +++GL + G  +EA+ +  ++
Sbjct: 481 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 199/413 (48%), Gaps = 7/413 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +C A +L+ A  ++ +   + V PD  TYN LI   C          +L+ M  
Sbjct: 130 NAMVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 186

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PDVVTY  L+    + S    ++ LLDEM + G  PD+ +YN +++ + Q G+ D+
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    +++      P T ++NI+L GLC     ++A  +   + + G  P +VT+N+LI 
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G +  A  +L+++   G  PN+++Y  ++    + +K    +  L  M  +G   
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T++ A  + G +  A + + Q+   G    ++SYNT+I+   K GK + A  LL
Sbjct: 367 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 426

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM  +G + D  T++ +  GLC+   I+ A      +  +G   N   YN I+  L K 
Sbjct: 427 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 486

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +   AI++F  M     + +  TY+ ++  L     +  A  LL      GV
Sbjct: 487 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  L +    D ALR+    ++    P+  T   LIK L  +GR   AR +L   G    
Sbjct: 72  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 127

Query: 214 A---------------------------PNAITYTTIMK-CCFRNRKYKLGLEILSAMKR 245
           A                           P+A TY T+++  C R R     L +L  M R
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTAN-ALAVLDEMLR 186

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +    D   Y  ++ A  K    K+A   +++M   G   DIV+YN ++N  C+EG+++ 
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A   L  +   G E +  ++ I++ GLC A   + A   +  M + G   N+  +N ++ 
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            L + G ++ A+ V E +       +S +Y+ ++H  CK K++  A   L
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 48/221 (21%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--------------------- 54
            FCK  +++KA A +   +  G  PD+V+YN L+ A C+                     
Sbjct: 342 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 401

Query: 55  -FVSFD--------AGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
             +S++        AG T     +LN M   G+ PD++TY+++ AG  R   +  ++   
Sbjct: 402 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 461

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            ++ +MGI P+   YN+++  L +  +   A  +F  MI     P  +T+ I++ GL   
Sbjct: 462 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA-- 519

Query: 161 RYTDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLR 199
                    + GL K     + EL +  ++ K L   G +R
Sbjct: 520 ---------YEGLIKEARDLLDELCSRGVVRKSLINKGAIR 551


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 215/430 (50%), Gaps = 41/430 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  +CK  R  KA   ++D + L GV  DV TYNMLI   C+      GY +L  MR
Sbjct: 232 NTVLHWYCKKGRF-KAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMR 290

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +  I P+ VTYN+L+ G +    +  +  LL+EML  G+ P+  ++N+L+      G   
Sbjct: 291 KRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFK 350

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNR---------------------------- 161
           EA ++F  M    L     ++ ++L+GLCKN                             
Sbjct: 351 EALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 162 -------YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                  + D A+ M   + K G  P++VTY+ LI G C+ GRL+TA+ I+  +   G +
Sbjct: 411 DGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLS 470

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN I Y+T++  C R    K  + I  AM  +G T D F +  ++ +  K G++ EA ++
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           M  M +DG+  + VS++ LIN Y   G+   A+ + DEM K G     +T+  L+ GLCK
Sbjct: 531 MRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
            G++  A   L+ +  +    +    N ++  + K G +D A+++F  M     + DSFT
Sbjct: 591 GGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFT 650

Query: 391 YSSMVHNLCK 400
           Y+S++  LC+
Sbjct: 651 YTSLISGLCR 660



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 197/408 (48%), Gaps = 4/408 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C     +K+  ++    + G  P +VTYN ++  YC+   F A   +L+ M 
Sbjct: 196 FNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMN 255

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++ DV TYN LI    R++  +    LL +M +  I P+  +YN+L++     GK  
Sbjct: 256 LKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVL 315

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++  +M+   L+P   TFN +++G         AL+MF  ++  G +   V+Y +L+
Sbjct: 316 IARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLL 375

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK      AR     +  +G     ITYT ++    +N      + +L+ M + G  
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGID 435

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  F ++GRLK A + + ++   G+  + + Y+TLI   C+ G L+    +
Sbjct: 436 PDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRI 495

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + M  +G   D +T  +L+  LCKAG +  A   +  M   G   N  +++C+++  G 
Sbjct: 496 YEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGS 555

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            G+   A +VF+ M         FTY S++  LCK   L +A K L S
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKS 603



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 217/469 (46%), Gaps = 15/469 (3%)

Query: 1   MFGKL--STRLLNICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDA 51
           +FG L  + RL N     F    R+   E +I D + +       G  P V T N ++ +
Sbjct: 108 VFGALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167

Query: 52  YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             +     + ++ L  M +  I PDV T+N LI           S  L+ +M + G  P 
Sbjct: 168 IVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPT 227

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           + +YN+++H   + G+   A  +   M    +     T+N++++ LC++  +     + R
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLR 287

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++K    P  VTYN L+ G    G++  AR +L E+   G +PN +T+  ++       
Sbjct: 288 DMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEG 347

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            +K  L++   M+ KG       Y  ++    K      A  +  +M  +GV +  ++Y 
Sbjct: 348 NFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            +I+  CK G L+ A ++L+EM K G + D  T++ LI+G C+ G +K A+  +  + ++
Sbjct: 408 GMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRV 467

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
           G   N   Y+ ++    + G +   I ++E+M       D FT++ +V +LCKA ++  A
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEA 527

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
            + +      G+     +   +++G   SG   +A  +  +  M K+ H
Sbjct: 528 EEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDE--MTKVGH 574



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 187/409 (45%), Gaps = 42/409 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   L++A  ++ +  + G+ PD+VTY+ LI+ +C+         I+ R+   G+SP+
Sbjct: 413 LCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPN 472

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            + Y++LI    R   L  ++ + + M+  G  PD +++N L+  L + GK  EA    +
Sbjct: 473 GIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMR 532

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   +F+ ++NG   +     A  +F  + K G  P   TY  L+KGLCK G
Sbjct: 533 CMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A   LK L +    P A+   T+M                               C
Sbjct: 593 HLIAAEKFLKSLQN---VPAAV--DTVM-------------------------------C 616

Query: 257 -TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I A  K G L +A     +MV   +  D  +Y +LI+  C++GK   A L   E E 
Sbjct: 617 NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 316 QG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +G    +K  +T  +DG+ KAG  K      + M+K+G   ++   N ++D   + GKI+
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 375 HAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              ++   M  ++      TY+ ++H   K K + ++  L  S + SG+
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/459 (20%), Positives = 202/459 (44%), Gaps = 15/459 (3%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            + T + N  +   CK+  L+KA ++  + ++  +LPD  TY  LI   C+      G T+
Sbjct: 611  VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR-----KGKTV 665

Query: 65   LNRM--REA----GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
            +  +  +EA     + P+ V Y   + G  +            +M ++G+  DV + N++
Sbjct: 666  IAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725

Query: 119  MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
            +    ++GK ++ + +  +M   +  P   T+NI+L+G  K ++   +  ++R +   G 
Sbjct: 726  IDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785

Query: 179  VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            +P+ +T   +I G+C++  L     ILK     G   +  T+  ++  C  N +     +
Sbjct: 786  LPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFD 845

Query: 239  ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            +++ M   G + D      +++   +  R +E+   + +M   G+  +   Y  L+N  C
Sbjct: 846  MVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC 905

Query: 299  KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            + G ++ A+++ +EM            + ++  L K G    A L L  M K+     + 
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIA 965

Query: 359  AYNCIVDRLGKDGKIDHAIN---VFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            ++  ++    K+G +  A+    V  +  +K D  +Y+ ++  LC    +  A +L    
Sbjct: 966  SFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025

Query: 415  LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
             + G     +  KA+V G+   G       I  K  +A+
Sbjct: 1026 KRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLAR 1064



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 123/279 (44%)

Query: 18   CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
            C++N LE    I+   I  GV  D  T+NMLI   C     +  + ++N M   GIS D 
Sbjct: 800  CESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDK 859

Query: 78   VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
             T +++++   RN     S  +L EM + GI P+   Y  L++ L ++G    A  V ++
Sbjct: 860  NTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEE 919

Query: 138  MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
            MI   + P     + M+  L K    D A  + R + K   VP + ++  L+   CK G 
Sbjct: 920  MIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGN 979

Query: 198  LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
            +  A  +   + + G   + ++Y  ++          +  E+   MKR G+  +   Y  
Sbjct: 980  VTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKA 1039

Query: 258  VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            ++   +  G     TD + + +     +  +S+N +IN 
Sbjct: 1040 LVGGILSQGTEFSGTDIILKDLLARGFITAMSFNHMINF 1078


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 219/406 (53%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   ++++A  +  + +  G  P+V++YN +I+  C+  +      +  +M 
Sbjct: 169 FNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKME 228

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +    P+VVTYN++I    ++ L++ +++ L EM++ GIPPDV +YN+++H    LG+ +
Sbjct: 229 QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA R+F++M+  ++ P T TFNI+++GLCK      A  +   + + G  P   TYN L+
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALM 348

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C   ++  A  +L  +   G APN  +Y  ++    ++++      +LS M  K  T
Sbjct: 349 DGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLT 408

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T++    ++GR +EA +  ++M + G+  D+++Y+ L++ +CK G L+ A  L
Sbjct: 409 PDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKL 468

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM ++  + +   +TILI G+  AG ++ A+     ++  G   ++  YN ++  L K
Sbjct: 469 LKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLK 528

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +G  D A   F  ME    + DS +Y+ ++    + +   +A +L+
Sbjct: 529 EGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLI 574



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 200/419 (47%), Gaps = 4/419 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV  +V + N+LI+  C+    D   +++ +M + GI PD +T+N+LI G      +  
Sbjct: 125 FGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKE 184

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L +EM+  G  P+V SYN++++ L + G    A RVF+ M      P   T+N +++
Sbjct: 185 AVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIID 244

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R  + A+     +   G  P++VTYN ++ G C  G+L  A  + KE+      P
Sbjct: 245 SLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMP 304

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+  ++    +         +   M  KG   + + Y  ++  +    ++ EA   +
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M+  G   ++ SYN LIN YCK  ++  A  LL EM ++    D  T++ L+ GLC+ 
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQV 424

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G  + A    + M   G   +L AY+ ++D   K G +D A+ + + M  +    +   Y
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  +  A +L  A +L       G+R        ++ GL   G   EA +   K+ 
Sbjct: 485 TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 4/403 (0%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +S D   T   RM      P VV +   +    +    S ++ L ++M   G+  +V+S 
Sbjct: 75  ISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSL 134

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++CL +L   D A  V   M    + P   TFN ++NGLC       A+ +F  +  
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G  P +++YN +I GLCK G    A  + +++  +   PN +TY TI+    ++R    
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNE 254

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            +E LS M  +G   D   Y T++  F  +G+L EAT   ++MV   V  D V++N L++
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CKEG +  A  + + M ++G E + YT+  L+DG C    +  A   L  M   G   
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           NL +YN +++   K  +++ A  +   M  K    D+ TYS+++  LC+  R   A  L 
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                SG+     A   ++DG    G   EA K+  ++   +I
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 183/370 (49%), Gaps = 4/370 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    N  + + CK   + +A   + + +  G+ PDVVTYN ++  +C     +   
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEAT 291

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--H 120
            +   M    + PD VT+N L+ G  +  ++S +  + + M E G  P+ ++YN+LM  +
Sbjct: 292 RLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGY 351

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           CL    + DEA +V   MI     P  +++NI++NG CK++  + A R+   + +    P
Sbjct: 352 CLHN--QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTP 409

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           + VTY+ L++GLC+ GR R A  + KE+  SG  P+ + Y+ ++    ++      L++L
Sbjct: 410 DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLL 469

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +    +   Y  +I      G+L+ A +   ++  DG++ DI +YN +I    KE
Sbjct: 470 KEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKE 529

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G  + AY    +ME  GF  D  ++ ++I G  +  +   A   ++ M    F ++   +
Sbjct: 530 GLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589

Query: 361 NCIVDRLGKD 370
             ++D    D
Sbjct: 590 QMLLDLESHD 599


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 217/462 (46%), Gaps = 54/462 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC    L+K      +  R G LP+VVTYN LIDAYC+    D  + +L  M  
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P++++YN +I G  R   +  + ++L+EM   G  PD  +YN+L++   + G   +
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQKH--------- 176
           A  +  +M+   ++P   T+  ++N +CK R  + A+  F     RGL+ +         
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397

Query: 177 ---------------------GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                GF P +VTYN  I G C   R+  A  +++E+ + G AP
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y+TI+    R  +     ++   M  KG + D   Y ++I    ++ RL EA D  
Sbjct: 458 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 517

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+  G+  D  +Y TLIN YC EG L  A  L DEM  +GF  D  T+++LI+GL K 
Sbjct: 518 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 577

Query: 336 GNIKGAR---LHLEYMNKIGFD----------SNLEAYNCI--VDRLGKDGKIDHAINVF 380
              + A+     L Y   +  D          SN+E  + +  +      G +  A  VF
Sbjct: 578 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 637

Query: 381 ESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ESM  ++       Y+ ++H  C+   LP A  L    + SG
Sbjct: 638 ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 195/391 (49%), Gaps = 4/391 (1%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           AE +  + IR  V P+V TYN+LI  +C       G      M   G  P+VVTYN+LI 
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
              +   +  +  LL  M   G+ P++ SYN +++ L + G   EA  + ++M     TP
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              T+N +LNG CK      AL +   + ++G  P +VTY  LI  +CKA  L  A    
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
            ++   G  PN  TYTT++    R         IL+ M   G++     Y   I     +
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
            R++EA   +++MV  G+  D+VSY+T+I+ +C++G+L+ A+ +  EM ++G   D  T+
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
           + LI GLC+   +  A    + M  +G   +   Y  +++    +G ++ A+++ + M  
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           K    D+ TYS +++ L K  R   A +LL 
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLF 588



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 215/453 (47%), Gaps = 12/453 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF-----VSFDA 60
           S+ + ++ V ++   N +++A   I      G +P V++YN ++DA  +      +S + 
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y  + R R   +SP+V TYN LI G      L   L    EM   G  P+V +YN+L+ 
Sbjct: 201 VYREMIRSR---VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              ++G+ DEA  + + M    + P   ++N+++NGLC+      A  +   +   GF P
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           + VTYN L+ G CK G    A  I  E+  +G +P+ +TYT ++    + R     +E  
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ +G   +   Y T+I  F + G L EA   + +M   G    +V+YN  I+ +C  
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            ++E A  ++ EM ++G   D  +++ +I G C+ G +  A    + M + G   +   Y
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 361 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + ++  L +  ++  A ++ + M       D FTY+++++  C    L  A  L    + 
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            G          +++GL      REAK++  K+
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 184/427 (43%), Gaps = 66/427 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK     +A  I  + +R GV P VVTY  LI++ C+  + +      ++MR 
Sbjct: 323 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 382

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY +LI G +R  LL+ +  +L+EM E G  P V +YN+ +H    L + +E
Sbjct: 383 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 442

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V Q+M+   L P   +++ +++G C+    D A +M + + + G  P+ VTY+ LI+
Sbjct: 443 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 502

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+  RL  A  + +E+ D G  P+  TYTT++            L +   M  KG+  
Sbjct: 503 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 562

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYM-----EQMVTDGVQLDIV----------------- 288
           D   Y  +I    K  R +EA   +     E+ V   V  D +                 
Sbjct: 563 DAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIK 622

Query: 289 ----------------------------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                                        YN +I+ +C+ G L  A+ L  EM   GF  
Sbjct: 623 GFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 682

Query: 321 DKYTHTILIDGLCKAG-----------NIKGARLHLEYMNKIGF-----DSNLEAYNCIV 364
              T   LI  L K G            ++  RL+   + K+       + N+EA   ++
Sbjct: 683 HTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVL 742

Query: 365 DRLGKDG 371
             + KDG
Sbjct: 743 TDMAKDG 749



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 141/287 (49%), Gaps = 8/287 (2%)

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYK 234
           H +      +++++K       +  A   +     SG  P  ++Y +++    R+R   K
Sbjct: 136 HVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVK 195

Query: 235 LGLE-ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           L  E +   M R   + + + Y  +I  F  +G L++      +M  +G   ++V+YNTL
Sbjct: 196 LSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTL 255

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+ YCK G+++ A+ LL  M  +G + +  ++ ++I+GLC+ G++K A   LE M   GF
Sbjct: 256 IDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF 315

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSAS 408
             +   YN +++   K+G    A+ +   M V++       TY+++++++CKA+ L  A 
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEM-VRNGVSPSVVTYTALINSMCKARNLNRAM 374

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           +        G+R  +     ++DG    G   EA +I +++  +  S
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV++YN ++  YC     D    ++  M    + PD  TYN+LI G         +L +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD+ML  G  PDV +Y  L+    +     +A ++  +M      P   T+N+++NG+C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D+A+   + L  +G  P  V+YNI++KGLC A R   A  ++ E+   G  PN +T
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    R    +  +EIL  + + G T +   Y  ++ AF K  ++  A  ++E MV
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   DIVSYNTL+   C+ G+++AA  LL +++ +G      ++  +IDGL KAG  +
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMV 395
            A   L  M   G   ++  Y+ I   L ++G+I+ AI  F   + M ++ ++  Y++++
Sbjct: 415 EALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAIL 474

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +   SA  L    + +G    +S    +++GL + G  +EA+++ +++
Sbjct: 475 LGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 187/366 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   R + A A++ D +R G +PDVVTY +L++A C+   +     +L+ MR+
Sbjct: 156 NTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRD 215

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +PD+VTYN ++ G  +   +  +++ L  +   G  P+  SYN ++  L    + ++
Sbjct: 216 KGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWED 275

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++  +M      P   TFN++++ LC+    + A+ +   + K+G  P  ++YN ++ 
Sbjct: 276 AEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILH 335

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK  ++  A   ++ +  SG  P+ ++Y T++    R  +    +E+L  +K KG T 
Sbjct: 336 AFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 395

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y TVI    K G+ +EA + + +MVT G+Q DI++Y+T+ +  C+EG++E A    
Sbjct: 396 VLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAF 455

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +++  G   +   +  ++ GLCK      A     YM   G   N   Y  +++ L  +
Sbjct: 456 CKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYE 515

Query: 371 GKIDHA 376
           G +  A
Sbjct: 516 GLVKEA 521



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 35/332 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   C+  R++ A   +      G  P+ V+YN+++   C    ++    ++  M  
Sbjct: 226 NVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSR 285

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVT+N LI+   R  L+  ++++LD++ + G  P+  SYN ++H   +  K D 
Sbjct: 286 KGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + M+     P   ++N +L  LC+    D A+ +   L+  G  P L++YN +I 
Sbjct: 346 AMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 405

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+   A  +L E+   G  P+ ITY+TI                           
Sbjct: 406 GLTKAGKTEEALELLNEMVTKGLQPDIITYSTI--------------------------- 438

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
              G C       + GR++EA     ++   G++ + V YN ++   CK     +A  L 
Sbjct: 439 -SSGLC-------REGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLF 490

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
             M   G   ++ T+TILI+GL   G +K AR
Sbjct: 491 TYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 137/273 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R E AE ++ +  R G  P+VVT+NMLI   C+    +    IL+++ +
Sbjct: 261 NIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK 320

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ ++YN ++    +   +  ++  ++ M+  G  PD+ SYN+L+  L + G+ D 
Sbjct: 321 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDA 380

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   +     TP   ++N +++GL K   T+ AL +   +   G  P+++TY+ +  
Sbjct: 381 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISS 440

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ GR+  A     ++ D G  PN + Y  I+    + R     +++ + M   G   
Sbjct: 441 GLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMP 500

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +   Y  +I      G +KEA + M ++ + GV
Sbjct: 501 NESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 33/263 (12%)

Query: 188 LIKGLCKAGRLRTARWILKE-----------------LGDSGHA----------PNAITY 220
           LIK LC +GR   AR +L                    G   +A          P+  TY
Sbjct: 96  LIKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYTY 155

Query: 221 TTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            T+++  C R R     L +L  M R+G   D   Y  ++ A  K    K+A   +++M 
Sbjct: 156 NTLIRGLCGRGRTDN-ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   DIV+YN ++N  C+EG+++ A   L  +   G E +  ++ I++ GLC A   +
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A   +  M++ G   N+  +N ++  L + G ++ A+ + + +       +S +Y+ ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
           H  CK K++  A   +   + SG
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSG 357


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 195/373 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK + +++A  ++ D +  G +PD VTY  LI+  C     +    + N  + 
Sbjct: 294 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 353

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD+V YNSL+ G     L+  +L +++EM E G  PD+ +YN +++ L ++G   +
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V  D I     P   TFN +++G CK    D+AL++   + ++G  P+ +TYN ++ 
Sbjct: 414 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG++       +E+   G  PN ITY  +++   R+ K +   +++  M ++G   
Sbjct: 474 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 533

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I  F + G L+ A    +++   G      ++NTLI  +  +  +  A  + 
Sbjct: 534 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 593

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   D YT+ +LIDG CK  N+  A +HL  M K GF  ++  +  +++ L  +
Sbjct: 594 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 653

Query: 371 GKIDHAINVFESM 383
            ++  A+ +   M
Sbjct: 654 HRVFQAVGIIHIM 666



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 205/412 (49%), Gaps = 5/412 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+A RL +A   ++DG+R   +PDVVTYN LI   C+          L RM  
Sbjct: 225 NIWIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 283

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TYN++I G  + S++  + +LL + +  G  PD  +Y SL++ L   G  + 
Sbjct: 284 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 343

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +     + P    +N ++ GLC      +AL++   + + G  P++ TYNI+I 
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  A  ++ +    G+ P+  T+ T++    +  K    L+++  M   G   
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V+    K G++ E  +  ++M+  G   + ++YN LI  +C+  K+E A  ++
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M ++G   D  +   LI G C+ G+++GA L  + + + G+ +  + +N ++      
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +  A  +F+ M  K    DS+TY  ++   CK   +  A   L+  +K G
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 635



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 214/468 (45%), Gaps = 36/468 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + +A RL  A             P    YN ++DA       D  + +  RM  AG+SPD
Sbjct: 60  YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 119

Query: 77  VVTYNS-----------------LIAGATRNSLLSCSL--------------DLLDEMLE 105
           + T+                   L A   R ++  C++               L D+ML 
Sbjct: 120 LHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLH 179

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             + P++ ++N ++H L + G   EA  +   +I   ++    T+NI + GLC+      
Sbjct: 180 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPE 239

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+R+  G++ +  VP++VTYN LI+GLCK    + A   L+ + + G  P+  TY TI+ 
Sbjct: 240 AVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 298

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +    +   E+L     KG+  D   YC++I      G ++ A +   +    G++ 
Sbjct: 299 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 358

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           DIV YN+L+   C +G +  A  +++EM ++G   D  T+ I+I+GLCK GNI  A + +
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
                 G+  ++  +N ++D   K  K+D A+ + E M       D+ TY+S+++ LCKA
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++   ++     +  G          +++    S    EA K+  K+
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 14/382 (3%)

Query: 51  AYCQFVS--FDAGYT-----ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDE 102
           AYC  V   +  G+T     + ++M    + P++  +N ++ A   R  +L   L LL +
Sbjct: 153 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGK 211

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +++ G+  ++++YN  +  L + G+  EA R+  D +     P   T+N ++ GLCK   
Sbjct: 212 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSM 270

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+   R +   G +P+  TYN +I G CK   ++ A  +LK+    G  P+ +TY +
Sbjct: 271 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 330

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++         +  LE+ +  + KG   D   Y +++      G +  A   M +M  +G
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DI +YN +IN  CK G +  A +++++   +G+  D +T   LIDG CK   +  A 
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             +E M + G   +   YN +++ L K GK++     F+ M +K    +  TY+ ++ N 
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510

Query: 399 CKAKRLPSASKLLLSCLKSGVR 420
           C++ ++  ASK+++   + G+ 
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLH 532



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 183/448 (40%), Gaps = 72/448 (16%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +R+  A I P    Y + I    R   L  ++D  + M     PP   +YN++M  L   
Sbjct: 42  SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 98

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------ 179
              D+A++V+  M+   ++P   T  I L   C       ALR+ R L   G V      
Sbjct: 99  AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVV 158

Query: 180 -------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                                    P L  +N ++  LCK G +  A  +L ++   G +
Sbjct: 159 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 218

Query: 215 ----------------------------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                                             P+ +TY T+++   +    +  +  L
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 278

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G   D F Y T+I  + KI  ++EAT+ ++  V  G   D V+Y +LIN  C E
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G +E A  L +E + +G + D   +  L+ GLC  G I  A   +  M + G   +++ Y
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++ L K G I  A  V     +K    D FT+++++   CK  +L SA +L+    +
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKK 444
            G+        +V++GL  +G   E  +
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNE 486



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 74/280 (26%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   +  A  ++ D I  G LPDV T+N LID YC+ +  D+   ++ RM E
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458

Query: 71  AGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLDLLDE 102
            GI+PD +TYNS++ G                           T N L+   C  + ++E
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518

Query: 103 -------MLEMGIPPDVWSYNSLMH------------CLFQLGKPDE------------- 130
                  M + G+ PD  S+N+L++             LFQ  K +E             
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ--KLEEKGYSATADTFNTL 576

Query: 131 ------------ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
                       A ++F +M+       + T+ ++++G CK    D A      + K GF
Sbjct: 577 IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 636

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +P + T+  +I  L    R+  A  I+  +   G  P  +
Sbjct: 637 IPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC++N++E+A  +I+   + G+ PD V++N LI  +C+    +  Y +  ++ E
Sbjct: 504 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 563

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G S    T+N+LI   +    +  +  + DEML  G   D ++Y  L+    +    D 
Sbjct: 564 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 623

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV------- 183
           A     +MI     P  +TF  ++N L  N     A+ +   + K G VPE+V       
Sbjct: 624 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNAD 683

Query: 184 -----TYNILIKGLCKAGRL 198
                   IL++ L K G +
Sbjct: 684 KKEIAAPKILVEDLMKKGHI 703


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 227/444 (51%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A A++   ++LG  P++VT + L++ YC          ++++M  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ VT+N+LI G   ++  S ++ L+D M+  G  PD+ +Y  +++ L + G  D 
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M  G L P    +  +++GLCKN++ D+AL +F+ ++  G  P +VTY+ LI 
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    P+  T++ ++    +  K     ++   M ++    
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y ++I  F    RL EA    E MV+     D+VSY+TLI  +CK  +++    L 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+T LI GL +AG+   A+   + M   G   N+  YN ++D L K+
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++        +TY+ M+  +CKA ++     L  +    GV+    A 
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G + EA  +  +++
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMK 563



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 205/382 (53%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A+I   +  G  PD+VTY ++++  C+    D  + +LN+M +  + P V+ Y
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIY 259

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
            ++I G  +N  +  +L+L  EM   GI P+V +Y+SL+ CL   G+  +A+R+  DMI 
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TF+ +++   K      A +++  + K    P +VTY+ LI G C   RL  
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ + + +      P+ ++Y+T++K   + ++   G+E+   M ++G   +   Y T+I 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              + G    A +  ++MV+DGV  +I++YNTL++  CK GKLE A ++ + +++   E 
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
             YT+ I+I+G+CKAG ++        ++  G   ++ AYN ++    + G  + A  +F
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 381 ESMEVKDSFTYSSMVHNLCKAK 402
           + M+   +   S   + L +A+
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRAR 581



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 182/361 (50%), Gaps = 1/361 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +     +L+ M E  I+PD
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T+++LI    +   L  +  L DEM++  I P + +Y+SL++      + DEA ++F+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   +++ ++ G CK +  D  + +FR + + G V   VTY  LI+GL +AG
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAG 445

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A+ I KE+   G  PN +TY T++    +N K +  + +   ++R       + Y 
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G++++  D    +   GV+ D+V+YNT+I+ +C++G  E A  L  EM++ 
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +   +  LI    + G+ + +   ++ M   GF  +      + + L  DG++D +
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624

Query: 377 I 377
            
Sbjct: 625 F 625



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 181/357 (50%), Gaps = 3/357 (0%)

Query: 29  IIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           I+++ +  G L P V+ Y  +ID  C+    D    +   M   GI P+VVTY+SLI+  
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
                 S +  LL +M+E  I PDV+++++L+    + GK  EA +++ +M+   + P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
            T++ ++NG C +   D A +MF  +  KH F P++V+Y+ LIKG CKA R+     + +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFR 420

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+   G   N +TYTT+++  F+     +  EI   M   G   +   Y T++    K G
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +L++A    E +    ++  I +YN +I   CK GK+E  + L   +  +G + D   + 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            +I G C+ G+ + A    + M + G   N   YN ++    +DG  + +  + + M
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 177/386 (45%), Gaps = 4/386 (1%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +  D    +   M ++   P ++ ++ L++   + +     + L ++M  +G+P + ++Y
Sbjct: 60  LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTY 119

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           + L++C  +  +   A  V   M+     P   T + +LNG C ++    A+ +   +  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G+ P  VT+N LI GL    +   A  ++  +   G  P+ +TY  ++    +     L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +L+ M++         Y T+I    K   + +A +  ++M T G++ ++V+Y++LI+
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             C  G+   A  LL +M ++    D +T + LID   K G +  A    + M K   D 
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++  Y+ +++      ++D A  +FE M  K    D  +YS+++   CKAKR+    +L 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSG 437
               + G+         ++ GL  +G
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAG 445



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 111/225 (49%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA R+++   +  +  + G++ + VTY  LI    Q    D    I   M   G+ P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++TYN+L+ G  +N  L  ++ + + +    + P +++YN ++  + + GK ++   +F 
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++    + P    +N M++G C+    + A  +F+ +++ G +P    YN LI+   + G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
               +  ++KE+   G A +A T   +       R  K  L++LS
Sbjct: 586 DREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 132/301 (43%), Gaps = 32/301 (10%)

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NGL + +  D+A+ +F  + K    P ++ ++ L+  + K  +      + +++ + G  
Sbjct: 55  NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N  TY+ ++ C  R  +  L L +L  M + GY  +     +++  +    R+ EA   
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++QM   G Q + V++NTLI+      K   A  L+D M  +G + D  T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            G+   A + L  M +                    GK++  +             Y+++
Sbjct: 234 RGDTDLAFILLNKMEQ--------------------GKLEPGV-----------LIYTTI 262

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +  LCK K +  A  L       G+R       +++  L + G   +A ++ S +   KI
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 455 S 455
           +
Sbjct: 323 N 323



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 4/129 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA ++E    +  +    GV PDVV YN +I  +C+  S +    +   M+E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+   YN+LI    R+     S +L+ EM   G   D  S   L+  +   G+ D+
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-STIGLVTNMLHDGRLDK 623

Query: 131 ANRVFQDMI 139
           +   F DM+
Sbjct: 624 S---FLDML 629


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 195/373 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK + +++A  ++ D +  G +PD VTY  LI+  C     +    + N  + 
Sbjct: 295 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 354

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD+V YNSL+ G     L+  +L +++EM E G  PD+ +YN +++ L ++G   +
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V  D I     P   TFN +++G CK    D+AL++   + ++G  P+ +TYN ++ 
Sbjct: 415 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG++       +E+   G  PN ITY  +++   R+ K +   +++  M ++G   
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 534

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I  F + G L+ A    +++   G      ++NTLI  +  +  +  A  + 
Sbjct: 535 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 594

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   D YT+ +LIDG CK  N+  A +HL  M K GF  ++  +  +++ L  +
Sbjct: 595 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 654

Query: 371 GKIDHAINVFESM 383
            ++  A+ +   M
Sbjct: 655 HRVFQAVGIIHIM 667



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 205/412 (49%), Gaps = 5/412 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+A RL +A   ++DG+R   +PDVVTYN LI   C+          L RM  
Sbjct: 226 NIWIRGLCEAGRLPEA-VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 284

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TYN++I G  + S++  + +LL + +  G  PD  +Y SL++ L   G  + 
Sbjct: 285 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 344

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +     + P    +N ++ GLC      +AL++   + + G  P++ TYNI+I 
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  A  ++ +    G+ P+  T+ T++    +  K    L+++  M   G   
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V+    K G++ E  +  ++M+  G   + ++YN LI  +C+  K+E A  ++
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M ++G   D  +   LI G C+ G+++GA L  + + + G+ +  + +N ++      
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +  A  +F+ M  K    DS+TY  ++   CK   +  A   L+  +K G
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 636



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 214/468 (45%), Gaps = 36/468 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + +A RL  A             P    YN ++DA       D  + +  RM  AG+SPD
Sbjct: 61  YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 120

Query: 77  VVTYNS-----------------LIAGATRNSLLSCSL--------------DLLDEMLE 105
           + T+                   L A   R ++  C++               L D+ML 
Sbjct: 121 LHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLH 180

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             + P++ ++N ++H L + G   EA  +   +I   ++    T+NI + GLC+      
Sbjct: 181 THVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPE 240

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+R+  G++ +  VP++VTYN LI+GLCK    + A   L+ + + G  P+  TY TI+ 
Sbjct: 241 AVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 299

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +    +   E+L     KG+  D   YC++I      G ++ A +   +    G++ 
Sbjct: 300 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 359

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           DIV YN+L+   C +G +  A  +++EM ++G   D  T+ I+I+GLCK GNI  A + +
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
                 G+  ++  +N ++D   K  K+D A+ + E M       D+ TY+S+++ LCKA
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++   ++     +  G          +++    S    EA K+  K+
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 188/382 (49%), Gaps = 14/382 (3%)

Query: 51  AYCQFVS--FDAGYT-----ILNRMREAGISPDVVTYNSLI-AGATRNSLLSCSLDLLDE 102
           AYC  V   +  G+T     + ++M    + P++  +N ++ A   R  +L   L LL +
Sbjct: 154 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGK 212

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +++ G+  ++++YN  +  L + G+  EA R+  D +     P   T+N ++ GLCK   
Sbjct: 213 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSM 271

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+   R +   G +P+  TYN +I G CK   ++ A  +LK+    G  P+ +TY +
Sbjct: 272 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 331

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++         +  LE+ +  + KG   D   Y +++      G +  A   M +M  +G
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DI +YN +IN  CK G +  A +++++   +G+  D +T   LIDG CK   +  A 
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             +E M + G   +   YN +++ L K GK++     F+ M +K    +  TY+ ++ N 
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511

Query: 399 CKAKRLPSASKLLLSCLKSGVR 420
           C++ ++  ASK+++   + G+ 
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLH 533



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 183/448 (40%), Gaps = 72/448 (16%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +R+  A I P    Y + I    R   L  ++D  + M     PP   +YN++M  L   
Sbjct: 43  SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 99

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------ 179
              D+A++V+  M+   ++P   T  I L   C       ALR+ R L   G V      
Sbjct: 100 AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVV 159

Query: 180 -------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                                    P L  +N ++  LCK G +  A  +L ++   G +
Sbjct: 160 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 219

Query: 215 ----------------------------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                                             P+ +TY T+++   +    +  +  L
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 279

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G   D F Y T+I  + KI  ++EAT+ ++  V  G   D V+Y +LIN  C E
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G +E A  L +E + +G + D   +  L+ GLC  G I  A   +  M + G   +++ Y
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++ L K G I  A  V     +K    D FT+++++   CK  +L SA +L+    +
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKK 444
            G+        +V++GL  +G   E  +
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNE 487



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 74/280 (26%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   +  A  ++ D I  G LPDV T+N LID YC+ +  D+   ++ RM E
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459

Query: 71  AGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLDLLDE 102
            GI+PD +TYNS++ G                           T N L+   C  + ++E
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519

Query: 103 -------MLEMGIPPDVWSYNSLMH------------CLFQLGKPDE------------- 130
                  M + G+ PD  S+N+L++             LFQ  K +E             
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQ--KLEEKGYSATADTFNTL 577

Query: 131 ------------ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
                       A ++F +M+       + T+ ++++G CK    D A      + K GF
Sbjct: 578 IGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGF 637

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +P + T+  +I  L    R+  A  I+  +   G  P  +
Sbjct: 638 IPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC++N++E+A  +I+   + G+ PD V++N LI  +C+    +  Y +  ++ E
Sbjct: 505 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 564

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G S    T+N+LI   +    +  +  + DEML  G   D ++Y  L+    +    D 
Sbjct: 565 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 624

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV------- 183
           A     +MI     P  +TF  ++N L  N     A+ +   + K G VPE+V       
Sbjct: 625 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNAD 684

Query: 184 -----TYNILIKGLCKAGRL 198
                   IL++ L K G +
Sbjct: 685 KKEIAAPKILVEDLMKKGHI 704


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 215/407 (52%), Gaps = 6/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  +   A +++   ++LG  PD  T+N LI+  C          ++ RM 
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  P+VVTYNS++ G  ++   S +LDLL +M E  +  DV++Y++++  L + G  D
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F++M    +     T+N ++ GLCK    ++ +++ + +     +P ++T+N+LI
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGY 248
               K G+L+ A  + KE+   G +PN ITY ++M   C +NR  +    +L  M R   
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN-NMLDLMVRNNC 341

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D   + ++I  + K+ R+ E      ++   G+  + V+Y+ L+  +C+ GKLE A  
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM   G   D  T+ IL+DGLC  G ++ A    E + K   + ++  Y  I++ + 
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K GK++ A N+F S+  K    +  TY+ M+  LCK   L  A+ LL
Sbjct: 462 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 225/452 (49%), Gaps = 17/452 (3%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  ST+  N+ V  FCK   L             G+  ++ T N++I+ +C+       Y
Sbjct: 74  GVASTKQFNL-VLDFCKKMELN------------GIAHNIYTLNIMINCFCRCCKTCFAY 120

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           ++L ++ + G  PD  T+N+LI G    S +S ++ L+  M+E G  P+V +YNS+++ +
Sbjct: 121 SVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGI 180

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G    A  + + M   ++     T++ +++ LC++   D A+ +F+ ++  G    L
Sbjct: 181 CKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSL 240

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN L+ GLCKAG+      +LK++      PN IT+  ++    +  K +   E+   
Sbjct: 241 VTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKE 300

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  KG + +   Y +++  +    RL EA + ++ MV +    DIV++ +LI  YCK  +
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR 360

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++    L  ++ K+G   +  T++IL+ G C++G ++ A    + M  +G   ++  Y  
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI 420

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++D L  +GK++ A+ +FE ++      D   Y+ ++  +CK  ++  A  L  S    G
Sbjct: 421 LLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKG 480

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           V+        ++ GL   G   EA  +  K+ 
Sbjct: 481 VKPNVMTYTVMISGLCKKGSLSEANILLRKME 512



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 180/352 (51%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C+   ++ A ++  +    G+   +VTYN L+   C+   ++ G  +L  M    I P
Sbjct: 214 SLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIP 273

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V+T+N LI    +   L  + +L  EM+  GI P+  +YNSLM       +  EAN + 
Sbjct: 274 NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+  + +P   TF  ++ G CK +  D  +++FR + K G V   VTY+IL++G C++
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A  + +E+   G  P+ +TY  ++     N K +  LEI   +++     D   Y
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    K G++++A +    +   GV+ ++++Y  +I+  CK+G L  A +LL +ME+
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            G E +  T+  LI    + G++  +   +E M   GF ++  +   ++D L
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 192/391 (49%), Gaps = 13/391 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V  DV TY+ +ID+ C+    DA  ++   M   GI   +VTYNSL+ G  +    +  +
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL +M    I P+V ++N L+    + GK  EAN ++++MI   ++P T T+N +++G 
Sbjct: 261 QLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           C       A  M   + ++   P++VT+  LIKG CK  R+     + +++   G   N 
Sbjct: 321 CMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANT 380

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY+ +++   ++ K ++  E+   M   G   D   Y  ++      G+L++A +  E 
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           +    + LDIV Y  +I   CK GK+E A+ L   +  +G + +  T+T++I GLCK G+
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 397
           +  A + L  M + G + N   YN ++    +DG +  +  + E M+             
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS------------ 548

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
            C      S+ K+++  L S V   K  +++
Sbjct: 549 -CGFSADASSIKMVIDMLSSAVWWFKEPRRS 578



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 169/325 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CKA +      ++ D     ++P+V+T+N+LID + +         +   M  
Sbjct: 244 NSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMIT 303

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GISP+ +TYNSL+ G    + LS + ++LD M+     PD+ ++ SL+    ++ + DE
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++F+ +    L   T T++I++ G C++   + A  +F+ +   G +P+++TY IL+ 
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLD 423

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G+L  A  I ++L  S    + + YT I++   +  K +    +  ++  KG   
Sbjct: 424 GLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKP 483

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I+   K G L EA   + +M  DG + +  +YNTLI  + ++G L A+  L+
Sbjct: 484 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLI 543

Query: 311 DEMEKQGFECDKYTHTILIDGLCKA 335
           +EM+  GF  D  +  ++ID L  A
Sbjct: 544 EEMKSCGFSADASSIKMVIDMLSSA 568



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 4/289 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +FQ+MI     P    F+   +G+   +  +  L   + ++ +G    + T N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +   A  +L ++   G+ P+  T+ T++       K    + +++ M   
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y +++    K G    A D + +M    V+ D+ +Y+T+I+  C++G ++AA
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EME +G +    T+  L+ GLCKAG        L+ M       N+  +N ++D 
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K+GK+  A  +++ M  K    ++ TY+S++   C   RL  A+ +L
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 220/489 (44%), Gaps = 54/489 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC A  ++ A  +       G LP+VVTYN LID YC+    D G+ +L  M  
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268

Query: 71  AGISP-----------------------------------DVVTYNSLIAGATRNSLLSC 95
            G+ P                                   D VTYN+LI G  +      
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L +  EML  G+ P V +Y SL+H + + G  + A      M    L P   T+  +++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +  Y + A R+ R +  +GF P +VTYN LI G C  G++  A  +L+++ + G +P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y+T++    R+      L +   M  KG   D   Y ++I  F +  R KEA D  
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M+  G+  D  +Y  LIN YC EG LE A  L +EM ++G   D  T+++LI+GL K 
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 336 GNIKGAR---LHLEYMNKIGFD----------SNLEAYNCI--VDRLGKDGKIDHAINVF 380
              + A+   L L Y   +  D          SN+E  + +  +      G +  A  VF
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           ESM  K    D   Y+ M+H  C+A  +  A  L    +KSG  +      A+V  L   
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688

Query: 437 GCRREAKKI 445
           G   E   +
Sbjct: 689 GKVNELNSV 697



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 229/452 (50%), Gaps = 11/452 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF---VSFDAGY 62
           ++ + ++ V ++ + + ++KA +I+      G +P V++YN ++DA  +    +SF    
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF--AE 190

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M E+ +SP+V TYN LI G      +  +L L D+M   G  P+V +YN+L+   
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +L K D+  ++ + M    L P   ++N+++NGLC+         +   + + G+  + 
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN LIKG CK G    A  +  E+   G  P+ ITYT+++    +       +E L  
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ +G   +   Y T++  F + G + EA   + +M  +G    +V+YN LIN +C  GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 361
           +E A  +L++M+++G   D  +++ ++ G C++ ++  A R+  E + K G   +   Y+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYS 489

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++    +  +   A +++E M       D FTY+++++  C    L  A +L    ++ 
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           GV         +++GL      REAK++  K+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 175/353 (49%), Gaps = 21/353 (5%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P VVTYN LI+ +C     +    +L  M+E G+SPDVV+Y+++++G  R+  +  +
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +  EM+E GI PD  +Y+SL+    +  +  EA  ++++M+   L P   T+  ++N 
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C     + AL++   + + G +P++VTY++LI GL K  R R A+ +L +L      P+
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY T+++ C  N ++K                      ++I  F   G + EA    E
Sbjct: 590 DVTYHTLIENC-SNIEFK-------------------SVVSLIKGFCMKGMMTEADQVFE 629

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+    + D  +YN +I+ +C+ G +  AY L  EM K GF     T   L+  L K G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
            +      + ++ +    S  E    +V+   ++G +D  ++V   M  KD F
Sbjct: 690 KVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEM-AKDGF 741



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 15/253 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+  R ++A  +  + +R+G+ PD  TY  LI+AYC     +    + N M E G+ PD
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYN--------------SLMHC 121
           VVTY+ LI G  + S    +  LL ++  E  +P DV  +               SL+  
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
               G   EA++VF+ M+  +  P    +NIM++G C+      A  +++ + K GF+  
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            VT   L+K L K G++     ++  +  S     A     +++   R     + L++L+
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734

Query: 242 AMKRKGYTFDGFG 254
            M + G+  +G  
Sbjct: 735 EMAKDGFLPNGIS 747


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 209/429 (48%), Gaps = 47/429 (10%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G+ PD +T N+LI+ YC     D G  +L  M   G SP+ VT+ SL+ G    S +S 
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD------LTPCTAT 149
           +  LL +M+ MG  P+V +Y +L++ L   G    A ++ ++M+ G+      + P    
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVC 240

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +  +++ LCK+   D    +F  ++  G  P++V Y+ +I G+C  GR   A+ +  E+ 
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D G  PN +T+  ++    +  K +    +L  M ++G + D F Y T+I  F   GR+ 
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCK------------------------------ 299
           +A D    M + G++ D VSYN LIN YCK                              
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420

Query: 300 -----EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
                EGK+  A+ L  EM+      +  T+ IL+DGLCK  ++  A     Y+    F 
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASK 409
            +++ +NC++D L K  KI+ A  +F     E +E  +  TY+ M+H LCK+ +L +A  
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLE-PNVITYTVMIHGLCKSGQLENAKD 539

Query: 410 LLLSCLKSG 418
           L L   + G
Sbjct: 540 LFLGMEEKG 548



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 181/355 (50%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G  + + P++V Y  +ID+ C+    D G  +   M+  GISPDVV Y+S+I G      
Sbjct: 229 GFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGR 288

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
              +  L +EM++ G+ P+V ++N L+  L + GK +EAN + + MI    +P T T+N 
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT 348

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++G C     D+A  +F  ++  G   + V+YN+LI G CK+GR+  A+ + +E+    
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P  ITY T++   FR  K +    +   MK    T +   Y  ++    K   L EA 
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +    +     Q  I  +N LI+  CK  K+E A  L + +  +G E +  T+T++I GL
Sbjct: 469 ELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGL 528

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
           CK+G ++ A+     M + G   NL  +N ++    ++ ++   + + + M  KD
Sbjct: 529 CKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 35/325 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   CKA ++E+A  ++   I+ G  PD  TYN LID +C     D    +   M 
Sbjct: 311 FNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSME 370

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI  D V+YN LI G  ++  +  +  L  EM+   I P V +YN+L+  LF+ GK  
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVR 430

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F +M   DLTP + T+NI+L+GLCKN +   A+ +F  L+ H F P +  +N LI
Sbjct: 431 DAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCKA ++  AR +   L   G  PN ITYT +                          
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGLEPNVITYTVM-------------------------- 524

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                    I    K G+L+ A D    M   G   ++V++NTL+  +C+  +++    L
Sbjct: 525 ---------IHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVEL 575

Query: 310 LDEMEKQGFECDKYTHTILIDGLCK 334
           L EM ++ F  D  T +I++D L K
Sbjct: 576 LQEMAEKDFSPDASTISIVVDLLSK 600



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 10/361 (2%)

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            +++ N + +   +P + ++N+L+    +       + L   M  +G+ PD  + N L++
Sbjct: 76  AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C   L K D    V  +M+    +P T TF  ++ GLC       A  + R + + G+ P
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKEL--GDSGHA----PNAITYTTIMKCCFRNRKYK 234
            +VTY  L+ GLC  G    A  + +E+  G+ G      PN + Y TI+    ++    
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
            G E+   MK +G + D   Y ++I      GR + A     +MV +GV  ++V++N LI
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLI 315

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK GK+E A  LL  M ++G   D +T+  LIDG C  G I  AR     M   G +
Sbjct: 316 DALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE 375

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 410
           ++  +YN +++   K G++  A  ++  M  K+      TY++++  L +  ++  A  L
Sbjct: 376 TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435

Query: 411 L 411
            
Sbjct: 436 F 436



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 183/379 (48%), Gaps = 4/379 (1%)

Query: 12  ICVCT----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           +C CT     CK   ++K + + ++    G+ PDVV Y+ +I   C    ++    + N 
Sbjct: 239 VCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNE 298

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G+ P+VVT+N LI    +   +  +  LL  M++ G  PD ++YN+L+      G+
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A  +F  M    +     ++N+++NG CK+     A +++R +     +P ++TYN 
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNT 418

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GL + G++R A  +  E+      P + TY  ++    +N      +E+   ++   
Sbjct: 419 LLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD 478

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +      +  +I    K  +++ A +   ++  +G++ ++++Y  +I+  CK G+LE A 
Sbjct: 479 FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAK 538

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   ME++G   +  T   L+ G C+   ++     L+ M +  F  +    + +VD L
Sbjct: 539 DLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLL 598

Query: 368 GKDGKIDHAINVFESMEVK 386
            KD K    +++  +   +
Sbjct: 599 SKDEKYREYLHLLPTFPAQ 617



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 185/372 (49%), Gaps = 10/372 (2%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           S +  + + +++M   P + S+N+L+  + ++ +  +   +++ M    L P   T NI+
Sbjct: 74  SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +N  C     D  L +   + + G  P  VT+  L+KGLC   R+  A  +L+++   G+
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193

Query: 214 APNAITYTTIMK--CCFRNR--KYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGR 267
            PN +TY T++   C   N     KL  E+L+     G T       YCT+I +  K G 
Sbjct: 194 RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGL 253

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + +  +   +M   G+  D+V+Y+++I+  C  G+ E A  L +EM  +G   +  T  +
Sbjct: 254 IDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNV 313

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           LID LCKAG ++ A   L+ M + G   +   YN ++D    +G+ID A ++F SME K 
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG 373

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D+ +Y+ +++  CK+ R+  A KL    +   +         ++ GL   G  R+A 
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433

Query: 444 KIQSKIRMAKIS 455
            +  ++++  ++
Sbjct: 434 NLFGEMKVHDLT 445



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 128/243 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  +CK+ R+ +A+ +  + +   ++P V+TYN L+    +       + +   M+ 
Sbjct: 382 NVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKV 441

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ++P+  TYN L+ G  +N+ LS +++L   +      P +  +N L+  L +  K + 
Sbjct: 442 HDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEI 501

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  +    L P   T+ +M++GLCK+   +NA  +F G+++ G  P LVT+N L++
Sbjct: 502 ARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMR 561

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+   ++    +L+E+ +   +P+A T + ++    ++ KY+  L +L     +G T 
Sbjct: 562 GFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTG 621

Query: 251 DGF 253
            G+
Sbjct: 622 RGY 624



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S ++ N  +   CKA ++E A  +       G+ P+V+TY ++I   C+    +    + 
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             M E G +P++VT+N+L+ G  +N  +   ++LL EM E    PD
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPD 587


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 206/406 (50%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  +  +A     D    G  P V TY  +I+  C+     A   +  +M 
Sbjct: 168 FNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKME 227

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           EAG  P+VVTYN LI    ++ L++ +LD+   M    I PD+++YNSL+  L    +  
Sbjct: 228 EAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK 287

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA+ +  +M   ++ P   TFN++++ +CK      A  +F+ + + G  P++VTY+ L+
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G      +  AR +   +   G  P+A +Y  ++K   + ++     ++ + M  +G T
Sbjct: 348 YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    ++GRL+EA D  + M ++G   D+ +Y+ L++ +CKEG L  A+ L
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M+    + D   + ILID +CK GN+K AR     +   G   N++ Y  I++ L K
Sbjct: 468 FRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCK 527

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +G +D A+  F +ME      D F+Y+ ++    + K    A++L+
Sbjct: 528 EGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLI 573



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 197/410 (48%), Gaps = 4/410 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T ++LID +      D  +++ ++M + G+ PD VT+N+LI G  +    + +
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++  D+    G  P V++Y ++++ L ++G+   A  +F+ M      P   T+NI+++ 
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++  + AL +F  ++     P++ TYN LI+GLC   R + A  +L E+      PN
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    +  K      +   M   G   D   Y +++  +     + EA    +
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+T G + D  SYN LI  YCK  +++ A  L +EM  QG   D   +  LI GLC+ G
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A+   + M+  G   +L  Y+ ++D   K+G +  A  +F  M+      D   Y+
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            ++  +CK   L  A KL       G+         +++ L   G   EA
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 207/416 (49%), Gaps = 5/416 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSL 97
           LP ++ +  L+ A  +   +      L++  E AG+SPD+ T + LI   +    +  + 
Sbjct: 91  LPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAF 150

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +  +M+++G+ PD  ++N+L++ L ++GK  +A   F D       P   T+  ++NGL
Sbjct: 151 SVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK   T  A  +F+ +++ G  P +VTYNILI  LCK   +  A  I   +     +P+ 
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY ++++     R++K    +L+ M       + F +  ++ A  K G++ EA    + 
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   GV+ D+V+Y++L+  Y    ++  A  L D M  +G + D +++ ILI G CKA  
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 393
           I  A+     M   G   +   YN ++  L + G++  A ++F++M     + D FTYS 
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++   CK   L  A +L      + ++   +    ++D +   G  ++A+K+ S++
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 163/343 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + CK   + +A  I        + PD+ TYN LI   C F  +     +LN M  
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I P++ T+N L+    +   +S +  +   M EMG+ PDV +Y+SLM+      +  E
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F  MI     P   ++NI++ G CK +  D A ++F  +   G  P+ V YN LI 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ GRLR A+ + K +  +G+ P+  TY+ ++    +         +   M+      
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I A  K G LK+A     ++   G+  ++  Y T+IN  CKEG L+ A    
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
             ME  G   D++++ ++I G  +  +   A   +  M   GF
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 155/316 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   R ++A A++ +   L ++P++ T+N+L+DA C+         +   M E
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTY+SL+ G +    +  +  L D M+  G  PD +SYN L+    +  + DE
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE 393

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F +MI   LTP    +N +++GLC+      A  +F+ +  +G +P+L TY++L+ 
Sbjct: 394 AKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLD 453

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G L  A  + + +  +   P+   Y  ++    +    K   ++ S +  +G   
Sbjct: 454 GFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLP 513

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I    K G L EA +    M  DG   D  SYN +I  + +      A  L+
Sbjct: 514 NVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLI 573

Query: 311 DEMEKQGFECDKYTHT 326
            EM  +GF  +  T T
Sbjct: 574 GEMRDRGFVAEAGTTT 589



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 150/357 (42%), Gaps = 40/357 (11%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLN----------------------GLCKNRYT--- 163
           D+A   F  M+  +  PC   F  +L+                      GL  + YT   
Sbjct: 76  DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135

Query: 164 -----------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
                      D A  +F  + K G  P+ VT+N LI GLCK G+   A     +   SG
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG 195

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P   TYTTI+    +  +      +   M+  G   +   Y  +I +  K   + EA 
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D    M    +  DI +YN+LI   C   + + A  LL+EM       + +T  +L+D +
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G +  A+   + M ++G + ++  Y+ ++       +I  A  +F++M  K    D+
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDA 375

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           F+Y+ ++   CKAKR+  A +L    +  G+         ++ GL   G  REA+ +
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 5/174 (2%)

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLD-EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           I+ +  L++   K G+   A + L  +ME  G   D YT +ILID       +  A    
Sbjct: 94  IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             M K+G   +   +N +++ L K GK   A+  F+  E        +TY+++++ LCK 
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               +A+ L     ++G +        ++D L       EA  I S ++  +IS
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRIS 267



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 44/105 (41%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K    + NI +   CK   L+ A  +  +    G+LP+V  Y  +I+  C+    D    
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
               M   G  PD  +YN +I G  +    S +  L+ EM + G 
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 6/408 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V   C+A ++E A       +     P+V+TY++LID  C+         +L  M+
Sbjct: 82  FNILVTGLCRAGKIETALEFF-RKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK 140

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G SPDV+TY  L+ G  + S ++ + ++L EML+ G  P++ +YNSL+H L +  +  
Sbjct: 141 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS 200

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  + +DM C   TP   T+  +++GLCK     +A  M   +   G  P+L+ YN+LI
Sbjct: 201 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 260

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCKA ++  +  +L+     G  P+ +TY++++    R+ +      +L  +K +G  
Sbjct: 261 NGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP 320

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G++ EA D  E M  DG   D+V+Y+TLI+  CK G+++ A+LL
Sbjct: 321 PDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLL 380

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M + G      T+  LI GLC   ++  A   +E M +     +   YN ++  + +
Sbjct: 381 LARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440

Query: 370 DGKIDH-AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
             ++D  A++ F+ M     + D  TYS ++  L K+K L     L+L
Sbjct: 441 MERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVL 488



 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 209/401 (52%), Gaps = 6/401 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+VVTYN LID  C+    D    +   M+    SP +VTYN+L+ G  R   L  +
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L  EML+     DV S+N L+  L + GK + A   F+ M     +P   T++++++G
Sbjct: 65  MALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDG 122

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK      A+ +   ++  G  P+++TY IL+ GLCK  ++  A  +L+E+ D+G  PN
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY +++    R R+    L ++  M  +G T +   Y T+I    K+GR+K+A   + 
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 242

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G   D++ YN LIN  CK  +++ +  LL      G + D  T++ +I GLC++ 
Sbjct: 243 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 302

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +  A   L Y+   G   ++  Y+ ++D L K GK+D A +++E M       D  TYS
Sbjct: 303 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYS 362

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +++  LCKA R+  A  LL   ++ G         +++ GL
Sbjct: 363 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 39/270 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A A++ D I  G  PD++ YNMLI+  C+    D    +L R    GI PD
Sbjct: 228 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 287

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+S+I G  R++ L  +  LL  +   G PPDV  Y++L+  L + GK DEA  +++
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347

Query: 137 DMICGD------------------------------------LTPCTATFNIMLNGLCKN 160
            M  GD                                      P T T+N ++ GLC  
Sbjct: 348 VMT-GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 406

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 219
            + D A+ +   +++    P  VTYNILI G+C+  R+ +A     +E+ D+G  P+ IT
Sbjct: 407 NHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHIT 466

Query: 220 YTTIMKCCFRNRK-YKLGLEILSAMKRKGY 248
           Y+ +++   +++  ++L   +L  M + GY
Sbjct: 467 YSILLEGLKKSKDLHELRHLVLDQMVQLGY 496



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD-AGYTI 64
           ST   N  +   C  N L++A  ++ +  R    P  VTYN+LI   C+    D A    
Sbjct: 392 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDY 451

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL-LDEMLEMG 107
              M + G+ PD +TY+ L+ G  ++  L     L LD+M+++G
Sbjct: 452 FQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 228/439 (51%), Gaps = 10/439 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N  +  F ++N+  +AE         G+ P++ TYN+LI   C+   F+ G  +L  
Sbjct: 115 RSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTW 174

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E G++PD+++Y +LI    ++  L  +++L DEM   G+ PDV  YN L+    + G 
Sbjct: 175 MFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGD 234

Query: 128 PDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             +AN +++ ++    + P   T+NIM+NGLCK    D ++ M+  ++K+   P+L T++
Sbjct: 235 FVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFS 294

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I GL KAG    A  + +E+ +SG +P+  TY  ++   FR  K     E+ + M  K
Sbjct: 295 SMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMS-K 353

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               +   Y  +I   +   ++++A  Y + +   G++ D  +Y  LIN  CK G L  A
Sbjct: 354 NNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKA 413

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +L+E E +G + D + ++ ++ GLCK G ++ A   +  M K     N   +N +++ 
Sbjct: 414 LRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLING 473

Query: 367 LGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             +  K++ AI+V   M+ KD      +Y+++++ LCKA+R   A   L   L+ G++  
Sbjct: 474 YVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPD 533

Query: 423 KSAQKAVVDGLRHSGCRRE 441
                 ++DGL    CR E
Sbjct: 534 MITYSLLIDGL----CRGE 548



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 205/443 (46%), Gaps = 80/443 (18%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F KAN + K   ++ +     V P V TYN++I+  C+    D    + NRM++   SPD
Sbjct: 235 FVKANEIWKR--LLTES---SVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPD 289

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA----- 131
           + T++S+I G ++    + +  +  EM+E G+ PDV +YN+++  LF+ GK ++      
Sbjct: 290 LFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWN 349

Query: 132 ----------------------NRVFQDMIC-------GDLTPCTATFNIMLNGLCKNRY 162
                                 N+  +  IC         L   + T+ +++NGLCKN Y
Sbjct: 350 VMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGY 409

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + ALR+    +  G   +   Y+ ++ GLCK G L  A                     
Sbjct: 410 LNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQA--------------------- 448

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
                         +E++  MK+     +   + ++I  +V+  +L+EA   + +M +  
Sbjct: 449 --------------VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 341
               +VSYNT+IN  CK  +   AYL L EM ++G + D  T+++LIDGLC+   +  A 
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
            L  + +NK     +L+ +N I+  L    K+D A+ +F  M     V D  T+++++  
Sbjct: 555 NLWHQCINK-RLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEG 613

Query: 398 LCKAKRLPSASKLLLSCLKSGVR 420
           L KA     A K+    L++G++
Sbjct: 614 LYKAGDCVEALKIWDRILEAGLQ 636



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 180/405 (44%), Gaps = 24/405 (5%)

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
           + D+ CQ   +     + + +    + P +V +   I    R    +CS D+        
Sbjct: 29  IFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVAL------ 82

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA---TFNIMLNGLCKNRYTD 164
                    S +    +   PD+A  +FQ+M+  D+  C     +FN MLN   ++    
Sbjct: 83  ---------SAIKAYAKCSMPDQALNLFQNMV--DIFGCNPGIRSFNSMLNAFIESNQWR 131

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A   F   Q  G  P L TYNILIK  CK  +    + +L  + ++G  P+ ++Y T++
Sbjct: 132 EAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLI 191

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GV 283
               ++      +E+   M  +G   D   Y  +I  F++ G   +A +  ++++T+  V
Sbjct: 192 NALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSV 251

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              + +YN +IN  CK GKL+ +  + + M+K     D +T + +I GL KAGN   A  
Sbjct: 252 YPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEK 311

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCK 400
             + M + G   ++  YN ++  L + GK++    ++  M   +     +Y+ ++  L  
Sbjct: 312 VFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLD 371

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            K++  A        + G++   +    +++GL  +G   +A +I
Sbjct: 372 NKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRI 416



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 3/238 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL++ + N  +  + +A +LE+A +++ +       P VV+YN +I+  C+   F   Y 
Sbjct: 461 KLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYL 520

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L  M E G+ PD++TY+ LI G  R   +  +L+L  + +   + PD+  +N ++H L 
Sbjct: 521 SLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLC 580

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              K D A  +F  M   +  P   T N ++ GL K      AL+++  + + G  P+++
Sbjct: 581 TAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDII 640

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR---KYKLGLE 238
           +YNI  KGLC   R+  A   L +  D G  PNA T+  +++    ++   +Y L  E
Sbjct: 641 SYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALNTE 698



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 137/293 (46%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D  TY +LI+  C+    +    IL      G   D   Y+S++ G  +  +L  +
Sbjct: 389 GLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQA 448

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L+ +M +     +   +NSL++   +  K +EA  V ++M   D  P   ++N ++NG
Sbjct: 449 VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIING 508

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A    + + + G  P+++TY++LI GLC+  ++  A  +  +  +    P+
Sbjct: 509 LCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              +  I+      +K  + LEI + M++     D   + T++    K G   EA    +
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWD 628

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +++  G+Q DI+SYN      C   ++  A   L +   +G   +  T  +L+
Sbjct: 629 RILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 127/278 (45%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   L KA  I+ +    G   D   Y+ ++   C+    +    ++++M++     +
Sbjct: 404 LCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLN 463

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              +NSLI G  R   L  ++ +L EM      P V SYN++++ L +  +  +A    +
Sbjct: 464 SHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLK 523

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P   T++++++GLC+    D AL ++         P+L  +NI+I GLC A 
Sbjct: 524 EMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQ 583

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  I  ++      P+ +T+ TIM+  ++       L+I   +   G   D   Y 
Sbjct: 584 KVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYN 643

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
                     R+ +A +++   +  G+  +  ++N L+
Sbjct: 644 ITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 217/462 (46%), Gaps = 54/462 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC    L+K      +  R G LP+VVTYN LIDAYC+    D  + +L  M  
Sbjct: 14  NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 73

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P++++YN +I G  R   +  + ++L+EM   G  PD  +YN+L++   + G   +
Sbjct: 74  KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 133

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQKH--------- 176
           A  +  +M+   ++P   T+  ++N +CK R  + A+  F     RGL+ +         
Sbjct: 134 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 193

Query: 177 ---------------------GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                GF P +VTYN  I G C   R+  A  +++E+ + G AP
Sbjct: 194 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 253

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y+TI+    R  +     ++   M  KG + D   Y ++I    ++ RL EA D  
Sbjct: 254 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 313

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+  G+  D  +Y TLIN YC EG L  A  L DEM  +GF  D  T+++LI+GL K 
Sbjct: 314 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 373

Query: 336 GNIKGAR---LHLEYMNKIGFD----------SNLEAYNCI--VDRLGKDGKIDHAINVF 380
              + A+     L Y   +  D          SN+E  + +  +      G +  A  VF
Sbjct: 374 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 433

Query: 381 ESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ESM  ++       Y+ ++H  C+   LP A  L    + SG
Sbjct: 434 ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 192/386 (49%), Gaps = 4/386 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           IR  V P+V TYN+LI  +C       G      M   G  P+VVTYN+LI    +   +
Sbjct: 2   IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  LL  M   G+ P++ SYN +++ L + G   EA  + ++M     TP   T+N +
Sbjct: 62  DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           LNG CK      AL +   + ++G  P +VTY  LI  +CKA  L  A     ++   G 
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN  TYTT++    R         IL+ M   G++     Y   I     + R++EA  
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +++MV  G+  D+VSY+T+I+ +C++G+L+ A+ +  EM ++G   D  T++ LI GLC
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           +   +  A    + M  +G   +   Y  +++    +G ++ A+++ + M  K    D+ 
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCL 415
           TYS +++ L K  R   A +LL   +
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLI 387



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 4/381 (1%)

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           +SP+V TYN LI G      L   L    EM   G  P+V +YN+L+    ++G+ DEA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            + + M    + P   ++N+++NGLC+      A  +   +   GF P+ VTYN L+ G 
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK G    A  I  E+  +G +P+ +TYT ++    + R     +E    M+ +G   + 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I  F + G L EA   + +M   G    +V+YN  I+ +C   ++E A  ++ E
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M ++G   D  +++ +I G C+ G +  A    + M + G   +   Y+ ++  L +  +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 373 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +  A ++ + M       D FTY+++++  C    L  A  L    +  G          
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365

Query: 429 VVDGLRHSGCRREAKKIQSKI 449
           +++GL      REAK++  K+
Sbjct: 366 LINGLNKQARTREAKRLLFKL 386



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 73/484 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK     +A  I  + +R GV P VVTY  LI++ C+  + +      ++MR 
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY +LI G +R  LL+ +  +L+EM E G  P V +YN+ +H    L + +E
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V Q+M+   L P   +++ +++G C+    D A +M + + + G  P+ VTY+ LI+
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 298

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+  RL  A  + +E+ D G  P+  TYTT++            L +   M  KG+  
Sbjct: 299 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 358

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYM-----EQMVTDGVQLDIV----------------- 288
           D   Y  +I    K  R +EA   +     E+ V   V  D +                 
Sbjct: 359 DAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIK 418

Query: 289 ----------------------------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                                        YN +I+ +C+ G L  A+ L  EM   GF  
Sbjct: 419 GFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 478

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-------NLEAYNCIVDRLGKDGKI 373
              T   LI  L K G         E M+++  D+         E    +V+   K+G +
Sbjct: 479 HTVTVITLIKALFKEG-------MNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNM 531

Query: 374 DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +  +NV     + +  +   +  ++       ++ K+ LS      RI+ +     VDG 
Sbjct: 532 EAVLNV---SRLYNKLSLKCVASSVPPGALTQTSQKIFLS------RIIANFDGTAVDGA 582

Query: 434 RHSG 437
            H G
Sbjct: 583 AHVG 586


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  204 bits (518), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 226/441 (51%), Gaps = 4/441 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA ++ KA  ++   I  G++PD  +Y  L+ + C+  +      ++++M E G   +
Sbjct: 107 LCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTN 166

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYNSL+ G   +  L+ SL LLD +++ G+ P+ ++Y+ L+   ++    DEA+++  
Sbjct: 167 TVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLD 226

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L GLCK   T++A+R+FR L   GF P +V+YNIL++ LC  G
Sbjct: 227 EIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEG 286

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L E+     +P+ +TY  ++     + + +  LE+L  M R  +      Y 
Sbjct: 287 RWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYN 346

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +IA   K G+L      ++QM+      +  +YN +  L C+EG ++ A+ ++  +  +
Sbjct: 347 PIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATL-CEEGMVQEAFSIIQSLGNK 405

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                +  + I+I  LC+ GN   A   L  M K GF  +   Y+ ++  L  +G ++ A
Sbjct: 406 QHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEA 465

Query: 377 INVFESMEV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           I +F  ME     D+  Y+S++   CK++R   A  +    +  G    ++    +V+G+
Sbjct: 466 IEIFSVMEENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGI 525

Query: 434 RHSGCRREAKKIQSKIRMAKI 454
            H      A K+  ++++  +
Sbjct: 526 IHEKEMDLATKVLRELQLRDV 546



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 186/402 (46%), Gaps = 6/402 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V + C+   +  A  ++      G   + VTYN L+   C   +      +L+R+ + G+
Sbjct: 139 VSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGL 198

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+  TY+ L+  A +      +  LLDE++  G  P++ SYN L+  L + G+ ++A R
Sbjct: 199 VPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIR 258

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F+++     +P   ++NI+L  LC     + A  +   +      P  VTYNILI  L 
Sbjct: 259 LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLA 318

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GR   A  +L+E+  +   P A +Y  I+    ++ K  L ++ L  M  + +     
Sbjct: 319 LHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYR-HCNPNE 377

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           G    IA   + G ++EA   ++ +           Y  +I   C++G    A+ LL EM
Sbjct: 378 GTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEM 437

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K GF  D +T++ LI GLC  G +  A      M +     + E YN ++    K  + 
Sbjct: 438 TKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NNKPDTENYNSLILGCCKSRRT 496

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           D A++VFE M  K    +  TY+ +V  +   K +  A+K+L
Sbjct: 497 DLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVL 538



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 141/284 (49%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M+E G  PDV+    L++ L +  K  +A +V + MI   + P  +++  +++ LC+
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCR 144

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+++   ++++G+    VTYN L++GLC  G L  +  +L  L   G  PNA T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ +++  ++ R      ++L  +  KG   +   Y  ++    K GR ++A     ++ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELP 264

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   ++VSYN L+   C EG+ E A +LL EM          T+ ILI  L   G  +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTE 324

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A   LE M +  F     +YN I+  L KDGK+D  +   + M
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQM 368



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 2/384 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C    L ++  ++   I+ G++P+  TY+ L++A  +    D    +L+ +  
Sbjct: 171 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIA 230

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++V+YN L+ G  +      ++ L  E+   G  P+V SYN L+  L   G+ +E
Sbjct: 231 KGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEE 290

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +  +M   + +P T T+NI++  L  +  T++AL +   + +  F P   +YN +I 
Sbjct: 291 ANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIA 350

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK G+L      L ++      PN  TY  I   C      +    I+ ++  K ++ 
Sbjct: 351 HLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLC-EEGMVQEAFSIIQSLGNKQHSS 409

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  VI +  + G    A   + +M   G   D  +Y++LI   C EG L  A  + 
Sbjct: 410 TQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF 469

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             ME+   + D   +  LI G CK+     A    E M   G+  N   Y  +V+ +  +
Sbjct: 470 SVMEENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHE 528

Query: 371 GKIDHAINVFESMEVKDSFTYSSM 394
            ++D A  V   ++++D  + S++
Sbjct: 529 KEMDLATKVLRELQLRDVISQSTL 552



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 4/222 (1%)

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  RL  A + L+ + + G  P+    T ++    +  K +  ++++  M   G   D  
Sbjct: 74  KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++++  + G +  A   +++M   G   + V+YN+L+   C  G L  +  LLD +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G   + YT++ L++   K      A   L+ +   G + NL +YN ++  L K+G+ 
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           + AI +F  +  K    +  +Y+ ++ +LC   R   A+ LL
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLL 295


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 211/385 (54%), Gaps = 5/385 (1%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
            +E++ A+ ++ +  G  P +  +N+L+  +C+         + + + + G+ P VV++N
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           +LI+G  ++  +     L   M   G+ PDV+++++L++ L + G+ DE + +F +M   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            L P   TF  +++G CK    D AL+ F+ +   G  P+LVTYN LI GLCK G L+ A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
           R ++ E+  SG  P+ IT+TT++  C ++   +  LEI   M  +G   D   +  +I+ 
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             + GR+ +A   +  M++ G + D  +Y  +I+ +CK+G ++  + LL EM+  G    
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVF 380
             T+  L++GLCK G +K A++ L+ M  +G   N   YN ++D   K G  +D  +++F
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD--VDIF 585

Query: 381 ESME--VKDSFTYSSMVHNLCKAKR 403
            S +  V D  +Y+++V+   K  +
Sbjct: 586 NSEKGLVTDYASYTALVNESSKTSK 610



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 4/340 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+L+ G PP ++ +N LMH   + G    A  VF ++    L P   +FN +++G CK+ 
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             +   R+   ++  G  P++ T++ LI GLCK GRL     +  E+   G  PN +T+T
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    +  K  L L+    M  +G   D   Y  +I    K+G LKEA   + +M   
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D +++ TLI+  CK+G +E+A  +   M ++G E D    T LI GLC+ G +  A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
              L  M   GF  +   Y  ++D   K G +     + + M+    V    TY+++++ 
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNG 537

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           LCK  ++ +A  LL + L  GV         ++DG    G
Sbjct: 538 LCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 8/223 (3%)

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
           R + L LE+L +    GY    + +  ++  F K G +  A    +++   G++  +VS+
Sbjct: 231 RSWALYLEVLDS----GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSF 286

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           NTLI+  CK G +E  + L   ME +G   D +T + LI+GLCK G +    L  + M  
Sbjct: 287 NTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 346

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            G   N   +  ++D   K GK+D A+  F+ M  +    D  TY+++++ LCK   L  
Sbjct: 347 RGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 406

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           A +L+     SG++  K     ++DG    G    A +I+ ++
Sbjct: 407 ARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM 449



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 24/281 (8%)

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGR 197
           I   LTP   +  I LN LC      + L  F  L  +  F   L +Y  ++  LC    
Sbjct: 77  ILPSLTPRHVSKLITLNPLCLP--PSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRM 134

Query: 198 LRTARWILKELGDSGHAPNAIT-YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           L  A  ++  L       +A T +++I++   R+  +   +         G  FD     
Sbjct: 135 LPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSV---------GLVFDA---- 181

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN--LYCKEGKLEAAYLLLDEME 314
            +I+A+V  G   +A      +  +   + I     L+   +  +  ++E ++ L  E+ 
Sbjct: 182 -LISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVL 240

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G+    Y   +L+ G CKAG++  ARL  + + K G    + ++N ++    K G ++
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
               +   ME +    D FT+S++++ LCK  RL   S L 
Sbjct: 301 EGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF 341


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 232/510 (45%), Gaps = 82/510 (16%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ V T C    L  A A +      G+ PD VTYN L++A+C+         +L RM+
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+P   TYN+L++   R   +  +  +++ M   G  PD+ +YN L   L Q GK D
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330

Query: 130 EANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA R+  +M   G   P   T+N +++   K R + +ALR+   ++  G  P LVT+NI+
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRN---------------- 230
           +K LCK G+L  A   L+++ + G AP+ ITY T++   C   N                
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450

Query: 231 -----------------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------- 264
                            ++Y+   E+L +  ++G+  D   Y TV+AA+ K         
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510

Query: 265 --------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
                                     + RLKEA D + + V  G+  D  +YN +I+ YC
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC 570

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEG LE A+   ++M +  F+ D  T   L++GLC  G +  A    E   + G   ++ 
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++  + K G +D A++ F+ MEVK    D+FTY+ ++  L +A R   A  +L   
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 415 LKSG-------VRILKSAQKAVVDGLRHSG 437
             SG         +LK +     D   H G
Sbjct: 691 ADSGKLSQSFACPLLKPSSADEADVKEHEG 720



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 189/380 (49%), Gaps = 7/380 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSF--DAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           R GV P +   N ++ A  +  S    A   +   + E  + P+  T+N L+        
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           L+ +L  L  M   G+ PD  +YN+L++   + G   EA  +   M    + P   T+N 
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++   +  +   A ++   +  +GF P+L TYN+L  GLC+AG++  A  +  E+   G
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 213 HA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
            A P+ +TY T++  CF+ R     L +L  M+ KG       +  V+ +  K G+L+EA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +E++  +G+  D+++YNTLI+ YCK G +  A+ L+DEM  +G + D +T   ++  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 387
           LCK    + A   L    + GF  +  +Y  ++    K+   + A+ +++ M     +  
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 388 SFTYSSMVHNLCKAKRLPSA 407
             TY++++  LC+ +RL  A
Sbjct: 524 ISTYNTLIKGLCRMERLKEA 543



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 220/483 (45%), Gaps = 41/483 (8%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           R  N+     C+A ++++A  +  +  RLG  LPDVVTYN L+DA  ++        +L 
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLE 373

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR+ G+ P +VT+N ++    +   L  +L  L+++ E G+ PDV +YN+L+    + G
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  +  +M+   L   T T N +L  LCK +  ++A  +     + GFVP+ V+Y 
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++    K      A  +  ++ +    P+  TY T++K   R  + K  ++ L+    K
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK 553

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I A+ K G L+ A  +  +MV +  + D+V+ NTL+N  C  GKL+ A
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L +   ++G + D  T+  LI  +CK G++  A    + M   G   +   YN ++  
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 367 LGKDGKIDHAINVF----ESMEVKDSF--------------------------------- 389
           L + G+ + A N+     +S ++  SF                                 
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDN 733

Query: 390 ---TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
              TY   ++ LC   +L  A  +L   ++ G+ +  S    +++GL     R+     Q
Sbjct: 734 ALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQTHAAGQ 793

Query: 447 SKI 449
           S +
Sbjct: 794 STL 796



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 1/332 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+ T  LN  +   CK  R E AE ++    + G +PD V+Y  ++ AY +  + +    
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + ++M E  + P + TYN+LI G  R   L  ++D L+E +E G+ PD  +YN ++H   
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC 570

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  + A R    M+     P   T N ++NGLC +   D AL++F    + G   +++
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+ +CK G + TA     ++   G  P+A TY  ++       + +    +L  +
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV-SYNTLINLYCKEGK 302
              G     F    +  +      +KE     E   ++  Q + + +Y   +N  C  G+
Sbjct: 691 ADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQ 750

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           L+ A  +LDEM ++G   D  T+  L++GL K
Sbjct: 751 LKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 146/316 (46%), Gaps = 42/316 (13%)

Query: 145 PCTATFNIMLNGLCKNRYT--DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           P     N +L+ L ++  T    +L +FR L +    P   T+N+L+   C  G L  A 
Sbjct: 169 PSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADAL 228

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
             L  +   G +P+A+TY T++    R         +L+ MKR G       Y T+++AF
Sbjct: 229 ATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAF 288

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF---- 318
            ++G +K+AT  +E M   G + D+ +YN L    C+ GK++ A+ L DEME+ G     
Sbjct: 289 ARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPD 348

Query: 319 ---------ECDKY-----------------------THTILIDGLCKAGNIKGARLHLE 346
                     C K+                       TH I++  LCK G ++ A   LE
Sbjct: 349 VVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            + + G   ++  YN ++D   K G +  A  + + M  K    D+FT +++++NLCK K
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK 468

Query: 403 RLPSASKLLLSCLKSG 418
           R   A +LL S  + G
Sbjct: 469 RYEDAEELLHSPPQRG 484


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A A++   ++LG  PD+VT N L++ +C         +++ +M E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  T+N+LI G  R++  S ++ L+D M+  G  PD+ +Y  +++ L + G  D 
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M  G + P    +N +++ LC  +  ++AL +F  +   G  P +VTYN LI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T++ ++    +  K     ++   M ++    
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL EA    E M++     ++V+YNTLI  +CK  +++    L 
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+T LI G  +A     A++  + M   G   ++  Y+ ++D L  +
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++      D +TY+ M+  +CKA ++     L  S    GV+      
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G + EA  +  +++
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMK 563



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 202/390 (51%), Gaps = 4/390 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +    + NR  +A A++   +  G  PD+VTY ++++  C+    D   ++L +M 
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +  I P VV YN++I        ++ +L+L  EM   GI P+V +YNSL+ CL   G+  
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A+R+  DMI   + P   TF+ +++   K      A +++  + K    P++ TY+ LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C   RL  A+ + + +      PN +TY T++K   + ++   G+E+   M ++G  
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F +      A    +QMV+DGV  DI++Y+ L++  C  GK+E A ++
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + +++   E D YT+ I+I+G+CKAG ++        ++  G   N+  Y  ++    +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMV 395
            G  + A  +F  M+    + DS TY++++
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLI 578



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 207/420 (49%), Gaps = 4/420 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L+ A  +  D ++    P +V ++ L+ A  +   FD   ++  +M+  GIS ++ TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI    R S LS +L +L +M+++G  PD+ + NSL++      +  +A  +   M+  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P + TFN +++GL ++     A+ +   +   G  P+LVTY I++ GLCK G +  A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +LK++      P  + Y TI+      +     L + + M  KG   +   Y ++I  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V+++ LI+ + KEGKL  A  L DEM K+  + D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T++ LI+G C    +  A+   E M       N+  YN ++    K  ++D  + +F 
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M     V ++ TY++++H   +A+   +A  +    +  GV         ++DGL ++G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 1/369 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   C    +  A  +  +    G+ P+VVTYN LI   C +  +     +L+ M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P+VVT+++LI    +   L  +  L DEM++  I PD+++Y+SL++      + 
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  +F+ MI  D  P   T+N ++ G CK +  D  + +FR + + G V   VTY  L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  +A     A+ + K++   G  P+ +TY+ ++     N K +  L +   ++R   
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  +I    K G++++  D    +   GV+ ++V+Y T+++ +C++G  E A  
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM+++G   D  T+  LI    + G+   +   +  M    F  +      + + L 
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML- 616

Query: 369 KDGKIDHAI 377
            DG++D + 
Sbjct: 617 HDGRLDKSF 625



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 4/290 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A+ +F  + K    P +V ++ L+  + K  +      + +++ + G + N  TY+ +
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + C  R  +  L L +L+ M + GY  D     +++  F    R+ +A   + QMV  G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           Q D  ++NTLI+   +  +   A  L+D M  +G + D  T+ I+++GLCK G+I  A  
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L+ M +   +  +  YN I+D L     ++ A+N+F  M+ K    +  TY+S++  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              R   AS+LL   ++  +        A++D     G   EA+K+  ++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 113/231 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+++   +  +  + G++ + VTY  LI  + Q    D    +  +M  
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G   N  +  +L + + +    + PD+++YN ++  + + GK ++
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P   T+  M++G C+    + A  +FR +++ G +P+  TYN LI+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  +++E+       +A T   +       R  K  L++LS
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 228/454 (50%), Gaps = 11/454 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---QFVSFDA 60
           K S+ + ++ V +  + N + KA +I+      G +P V++YN ++DA     Q V    
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G  I   M E+G+SP+V TYN LI G      L   L    EM   G  P+V +YN+++ 
Sbjct: 189 G--IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +L K  EA ++ + M    L P   ++N+++NGLC+         +   + K  +VP
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           + VT+N LI G C  G    A  +  E+  +G +PN +TYTT++    +       +E L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ +G   +G  Y T+I  F + G LK+A   M++MV +G    I++YN LIN +C  
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA 359
           G++E A  LL EM ++GF  D  +++ +I G C+   ++ A +L +E + K G   ++  
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVAT 485

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y+ ++  L K  ++    ++F+ M       D  TY+S+++  C    L  A +L    +
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + G          +++G       +EAK++  K+
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 226/492 (45%), Gaps = 60/492 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC A  LE       +  R G LP+VVTYN +IDAYC+       + +L  M  
Sbjct: 207 NILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL 266

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P++++YN +I G  R   +  + ++L+EM +    PD  ++N+L++    +G   +
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ 326

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCK----NR------------------------- 161
           A  +  +M+   L+P   T+  ++N +CK    NR                         
Sbjct: 327 ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386

Query: 162 ------YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                 +   A ++ + + ++GF P ++TYN LI G C  GR+  A  +L+E+ + G  P
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y+TI+    RN++ +   ++   M  KG + D   Y ++I    K  RL E  D  
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M++ G+  D V+Y +LIN YC EG L+ A  L DEM ++GF  D  T+ +LI+G  K 
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566

Query: 336 GNIKGAR---LHLEYMNKIGFDSNLEAYNCIVDRLGK---------------DGKIDHAI 377
              K A+   L L Y   +    N   YN ++D                    G ++ A 
Sbjct: 567 SRTKEAKRLLLKLLYEESV---PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEAD 623

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            V ESM  K    +   Y+ ++H   K   +  A  L    L SG         A+   L
Sbjct: 624 RVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683

Query: 434 RHSGCRREAKKI 445
            H G   E  ++
Sbjct: 684 YHEGKEVELNQL 695



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 197/394 (50%), Gaps = 4/394 (1%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           AE I  + +  GV P+V TYN+LI  +C   + + G      M   G  P+VVTYN++I 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
              +   +  +  LL  M   G+ P++ SYN +++ L + G+  E + + ++M      P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              TFN ++NG C       AL +   + K+G  P +VTY  LI  +CKAG L  A   L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
            ++ D G  PN  TYTT++    +    K   +I+  M   G+T     Y  +I     +
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GR+++A+  +++M+  G   D+VSY+T+I+ +C+  +LE A+ L  EM  +G   D  T+
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
           + LI GLCK   +       + M  +G   +   Y  +++    +G +D A+ + + M  
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           K    D  TY+ +++   K  R   A +LLL  L
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 20/442 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+  ++++   I+ +  +   +PD VT+N LI+ YC   +F     +   M +
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+VVTY +LI    +   L+ +++ LD+M + G+ P+  +Y +L+    Q G   +
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M+    TP   T+N ++NG C     ++A  + + + + GF+P++V+Y+ +I 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+   L  A  +  E+   G +P+  TY+++++   + R+     ++   M   G   
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I A+   G L +A    ++M+  G   DIV+YN LIN + K+ + + A  LL
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 311 DEMEKQGFECDKYTHTILID---------------GLCKAGNIKGARLHLEYMNKIGFDS 355
            ++  +    ++ T+  LID               G C  G +  A   LE M + G+  
Sbjct: 577 LKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKL 636

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N E YN I+    K G I+ A N+++ M        S T  ++  +L    +    ++LL
Sbjct: 637 NEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696

Query: 412 LSCLKSGVRILKSAQKAVVDGL 433
              LKS  RI ++A   V+ G+
Sbjct: 697 DYTLKS-CRITEAALAKVLIGI 717



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 184/381 (48%), Gaps = 28/381 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   L++A  I+ + +  G  P ++TYN LI+ +C     +    +L  M E G  PD
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+Y+++I+G  RN  L  +  L  EM+  GI PDV +Y+SL+  L +  +  E   +FQ
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P   T+  ++N  C     D ALR+   + + GF P++VTYN+LI G  K  
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R + A+ +L +L      PN ITY T++  C  N ++K  L ++             G+C
Sbjct: 568 RTKEAKRLLLKLLYEESVPNEITYNTLIDNC-NNLEFKSALALMK------------GFC 614

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                    G + EA   +E M+  G +L+   YN +I+ + K G +E AY L  EM   
Sbjct: 615 MK-------GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHL----EYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           GF      H++ I  L K+   +G  + L    +Y  K    +       ++    K+G 
Sbjct: 668 GFA----PHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGN 723

Query: 373 IDHAINVFESMEVKDSFTYSS 393
           +D   NV + M +     YSS
Sbjct: 724 MDAVFNVLKDMALSGLLPYSS 744


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 187/357 (52%), Gaps = 3/357 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            NI +   CKA +L KAE +I D    G  P++VTYN LID +C+  S    Y    IL 
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILK 262

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M    I P+ +T+N+LI G  ++  +  + +  +EM   G+ P++ +YNSL++ L   G
Sbjct: 263 EMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K DEA  ++  M+   L P   TFN ++NG CK +    A ++F  + +   VP  +T+N
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I   CKAG +     +   + D G  PN  TY  ++    RN+  +   ++L+ M+  
Sbjct: 383 TMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENY 442

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D   Y  +I  + K G   +A   + +M+  GV+ + V+YNTL++ YC EG L+AA
Sbjct: 443 ELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAA 502

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             +  +MEK+G   +  T+ +LI G CK G ++ A   L  M + G + N   Y+ +
Sbjct: 503 LKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 3/383 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS    N  +    K N   + + +  + I+  + P++ T+N+ I+  C+    +    
Sbjct: 162 KLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAED 221

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSL---LSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           ++  ++  G SP++VTYN+LI G  +      +  +  +L EML   I P+  ++N+L+ 
Sbjct: 222 VIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLID 281

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +      A   F++M    L P   T+N ++NGL  N   D A+ ++  +   G  P
Sbjct: 282 GFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKP 341

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VT+N LI G CK   ++ AR +  ++ +    PNAIT+ T++    +    + G  + 
Sbjct: 342 NIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALH 401

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           ++M  +G   +   Y  +IA   +   ++ A   + +M    ++ D+V+YN LI  +CK+
Sbjct: 402 NSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKD 461

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+   A  LL EM   G + +  T+  L+DG C  GN+K A      M K G  +N+  Y
Sbjct: 462 GEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTY 521

Query: 361 NCIVDRLGKDGKIDHAINVFESM 383
           N ++    K GK++ A  +   M
Sbjct: 522 NVLIKGFCKTGKLEDANRLLNEM 544



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 7/354 (1%)

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCL-FQLGKPD 129
           I P++ T+N  I G  +   L+ + D+++++   G  P++ +YN+L+  HC     GK  
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A+ + ++M+   + P   TFN +++G CK+     A   F  +Q+ G  P +VTYN LI
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL   G+L  A  +  ++   G  PN +T+  ++    + +  K   ++   +  +   
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T+I AF K G ++E       M+ +G+  ++ +YN LI   C+   + AA  L
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+EME    + D  T+ ILI G CK G    A   L  M  +G   N   YN ++D    
Sbjct: 436 LNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCM 495

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +G +  A+ V   ME +    +  TY+ ++   CK  +L  A++LL   L+ G+
Sbjct: 496 EGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           S N L+  L +  +  E   V+++MI   + P   TFNI +NGLCK    + A  +   +
Sbjct: 167 SCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI 226

Query: 174 QKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           +  GF P +VTYN LI G CK   AG++  A  ILKE+  +   PN IT+ T++    ++
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                       M+R+G   +   Y ++I      G+L EA    ++MV  G++ +IV++
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMN 349
           N LIN +CK+  ++ A  L D++ +Q    +  T   +ID  CKAG + +G  LH   ++
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLD 406

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLP 405
           + G   N+  YNC++  L ++  +  A   +N  E+ E+K D  TY+ ++   CK     
Sbjct: 407 E-GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPS 465

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            A KLL   L  GV+        ++DG    G  + A K+++++ 
Sbjct: 466 KAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME 510



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 42/246 (17%)

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           LG      NA+    ++     N +     E+   ++  G+         +++A VK   
Sbjct: 121 LGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNE 180

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             E     ++M+   +Q ++ ++N  IN  CK GKL  A  ++++++  GF  +  T+  
Sbjct: 181 TGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNT 240

Query: 328 LIDGLCKAG--------------------------------------NIKGARLHLEYMN 349
           LIDG CK G                                      N+  A+   E M 
Sbjct: 241 LIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ 300

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
           + G   N+  YN +++ L  +GK+D AI +++ M       +  T++++++  CK K + 
Sbjct: 301 RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIK 360

Query: 406 SASKLL 411
            A KL 
Sbjct: 361 EARKLF 366


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 205/383 (53%), Gaps = 1/383 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
            LE++ A  ++ +  G  P+   +N+L+  +C+     +   + + + + G+ P VV++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           +LI+G  +   +     L   M    + PDV+++++L++ L + G+ DE + +F +M   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            L P   TF ++++G CK    D AL+ F+ +   G  P+LVTYN LI GLCK G L+ A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
           R ++ E+  SG  P+ IT+TT++  C +    +  LEI   M  +G   D   +  +I+ 
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             + GR+ +A   +  M++ G + D  +Y  +++ +CK+G +   + LL EM+  G    
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVF 380
             T+  L++GLCK G +K A++ L+ M  +G   N   YN +++   K G  +D  I   
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNS 481

Query: 381 ESMEVKDSFTYSSMVHNLCKAKR 403
           E   VKD  +Y+++V+   K  +
Sbjct: 482 EKGLVKDYASYTALVNESSKTSK 504



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 160/322 (49%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+L+ G PP+ + +N LMH   ++G    A  VF ++    L P   +FN +++G CK  
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             +   R+   ++     P++ T++ LI GLCK GRL     +  E+   G  PN +T+T
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +  K  L L+    M  +G   D   Y  +I    K+G LKEA   + +M   
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS 311

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D +++ TLI+  CK G +E+A  +   M ++G E D    T+LI GLC+ G +  A
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
              L  M   GF  +   Y  +VD   K G +     + + M+    V    TY+++++ 
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNG 431

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
           LCK  ++ +A  LL + L  GV
Sbjct: 432 LCKQGQVKNAKMLLDAMLNVGV 453



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G+ P    +N+L+ G CK G + +AR +  E+   G  P  +++ T++  C +    + G
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             +   M+ +    D F +  +I    K GRL E +   ++M   G+  + V++  LI+ 
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK GK++ A      M  QG   D  T+  LI+GLCK G++K AR  +  M+  G   +
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316

Query: 357 LEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +  ++D   K G ++ A+      V E +E+ D   ++ ++  LC+  R+  A ++L
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL-DDVAFTVLISGLCRDGRVHDAERML 375

Query: 412 LSCLKSGVRILKSAQKAVVD 431
              L +G +        VVD
Sbjct: 376 RDMLSAGFKPDDPTYTMVVD 395



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 8/223 (3%)

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
           R +   LE+L +    GY  + F +  ++  F K+G +  A    +++   G++  +VS+
Sbjct: 125 RSWAFYLEVLDS----GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSF 180

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           NTLI+  CK G +E  + L   ME +    D +T + LI+GLCK G +    L  + M  
Sbjct: 181 NTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 240

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            G   N   +  ++D   K GK+D A+  F+ M  +    D  TY+++++ LCK   L  
Sbjct: 241 KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 300

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           A +L+     SG+R  +     ++DG    G    A +I+ ++
Sbjct: 301 ARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRM 343



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +LE ++    E+   G+  + +   +L+ G CK G +  ARL  + + K G    + ++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 362 CIVDRLGKDGKIDHAI---NVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLL 411
            ++    K G ++       V ES  V  D FT+S++++ LCK  RL   S L 
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLF 235


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 215/427 (50%), Gaps = 4/427 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K NR+E A  +  +  RL +   V T+N++++  C+          +  M  
Sbjct: 196 NDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEG 255

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VV+YN++I G +    +  +  +LD M   GI PD ++Y SL+  + + G+ +E
Sbjct: 256 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEE 315

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F  M+   L P   T+N +++G C     + A      + K G +P + TYN+L+ 
Sbjct: 316 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 375

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L   GR+  A  ++KE+   G  P+AITY  ++    R    K   ++ + M  KG   
Sbjct: 376 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 435

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y ++I    +  R+KEA D  E+++  GV  D++ +N +++ +C  G +E A++LL
Sbjct: 436 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 495

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+++    D+ T   L+ G C+ G ++ AR+ L+ M + G   +  +YN ++   G+ 
Sbjct: 496 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G I  A  V + M          TY++++  LCK +    A +LL   +  G+    S  
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 615

Query: 427 KAVVDGL 433
            ++++G+
Sbjct: 616 LSLIEGM 622



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 4/267 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    N+ V       R+ +A+ +I +  + G++PD +TYN+LI+ Y +  +    + + 
Sbjct: 366 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 425

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLF 123
           N M   GI P  VTY SLI   +R + +  + DL +++L+ G+ PDV  +N+++  HC  
Sbjct: 426 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC-- 483

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  + A  + ++M    + P   TFN ++ G C+    + A  +   +++ G  P+ +
Sbjct: 484 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 543

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YN LI G  + G ++ A  +  E+   G  P  +TY  ++KC  +N++  L  E+L  M
Sbjct: 544 SYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKE 270
             KG + D   Y ++I     +  L E
Sbjct: 604 VNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 39/307 (12%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           +  F++++   C+ R  D A + F  +++ G VP++ T N ++    K  R+  A W+L 
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMA-WVL- 214

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
                        Y  + +           L I S +    YTF+      ++    K G
Sbjct: 215 -------------YAEMFR-----------LRISSTV----YTFN-----IMVNVLCKEG 241

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +LK+A +++  M   G + ++VSYNT+I+ Y   G +E A  +LD M  +G E D YT+ 
Sbjct: 242 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 301

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            LI G+CK G ++ A    + M +IG   N   YN ++D     G ++ A +  + M  K
Sbjct: 302 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 361

Query: 387 DSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
                  TY+ +VH L    R+  A  ++    K G+         +++G    G  ++A
Sbjct: 362 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 421

Query: 443 KKIQSKI 449
             + +++
Sbjct: 422 FDLHNEM 428



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 7/265 (2%)

Query: 197 RLRTARWILKELG---DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           R+ T R +  EL    D     ++I +  +++ C   R+     +    MK KG      
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
               +++ F+K+ R++ A     +M    +   + ++N ++N+ CKEGKL+ A   +  M
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 253

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E  GF+ +  ++  +I G    GNI+GAR  L+ M   G + +   Y  ++  + K+G++
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 313

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A  +F+ M     V ++ TY++++   C    L  A       +K G+    S    +
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
           V  L   G   EA  +  ++R   I
Sbjct: 374 VHALFMEGRMGEADDMIKEMRKKGI 398


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 199/369 (53%), Gaps = 1/369 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +  G  P V  YN+LI+ +C+  S      I N +R+ G+ P  V++N+LI G  ++  L
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                L   M E  I PDV++Y+ L+H L + G+ D A ++F +M    L P   TF  +
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G C++R  D+A+  +  +   G  P+LV YN L+ GLCK G +  AR ++ E+   G 
Sbjct: 335 IDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGM 394

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ ITYTT++    +    +  +EI   M  +G   D   +  +I+ F + GR+++A  
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAER 454

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            + +MV  G++ D  +Y  +I+ YCK+G ++  + LL EM+  G +    T+ +L++GLC
Sbjct: 455 TLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYS 392
           K G +K A + LE M  +G   +   YN +++   K+GK +  + +  E   + D   Y+
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYT 574

Query: 393 SMVHNLCKA 401
           S+V    K+
Sbjct: 575 SLVSEYNKS 583



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 168/322 (52%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+LE G PP V  YN L++   + G   +A  +F ++    L P T +FN ++NGLCK+R
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   R+ + ++++   P++ TY++LI GLCK GRL  A  +  E+   G  PN IT+T
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    R+R+    +     M   G   D   Y T++    K+G + +A   +++M   
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D ++Y TLI+ YCKEG LE+A  +   M ++G   D    T LI G C+ G ++ A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 397
              L  M + G   +   Y  ++D   K G +     + + M++        TY+ +++ 
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
           LCK  ++ +A+ LL + L  GV
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGV 534



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   + KA  ++ +   +G+ PD +TY  LID YC+    ++   I   M
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+  D V + +LI+G  R+  +  +   L EM+E G+ PD  +Y  ++    + G  
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
               ++ ++M      P   T+N+++NGLCK     NA  +   +   G  P+ +TYNIL
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           ++G CK G+   A  +LK   + G   +   YT+++
Sbjct: 545 LEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 98/183 (53%), Gaps = 6/183 (3%)

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           +  +++  G    +  YN LIN +CKEG +  A L+ +E+ K+G      +   LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 334 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           K+ N+ +G RL  + M +     ++  Y+ ++  L K+G++D A  +F+ M+ +    + 
Sbjct: 270 KSRNLDEGFRLK-KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            T+++++   C+++R+ SA       L  GV+        +++GL   G   +A+K+  +
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 449 IRM 451
           +RM
Sbjct: 389 MRM 391



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 4/130 (3%)

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +    E+ + GF      + ILI+  CK G+I+ A+L    + K G      ++N +++ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K   +D    + ++ME      D FTYS ++H LCK  RL  A +L     + G+R  
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 423 KSAQKAVVDG 432
                A++DG
Sbjct: 328 GITFTALIDG 337


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 202/390 (51%), Gaps = 4/390 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK     +A  +  D +  G  PDV TYN +I+  C+     A   +L +M EAG  P+
Sbjct: 173 LCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPN 232

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY++LI    R+ L++ +LD+   M   GI PD+++Y SL+  L +  +  EA+ +  
Sbjct: 233 MVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN 292

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   ++ P   TFN++++  CK      AL + + + + G  P +VTY+ L+ G     
Sbjct: 293 EMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  AR +   +   G  PN  +Y  ++    + ++    +++ + M  +G T +   Y 
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYN 412

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  F ++G+L+EA D    M T+G   D+ +Y+ L++ +CK+G L  A+ L   M+  
Sbjct: 413 TLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQST 472

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + +   +TIL+  +CK+GN K AR     +   G   +++ Y  I++ L K+G +D A
Sbjct: 473 YLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532

Query: 377 INVFESMEV----KDSFTYSSMVHNLCKAK 402
           +  F +ME      D  +Y+ ++  L + K
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHK 562



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 208/411 (50%), Gaps = 4/411 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G+ P++ T ++ ++ +CQ    D G+++L ++ + G+ P +VT+ +LI G  +    + 
Sbjct: 122 VGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQ 181

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +++L D+M+  G  PDV++YN++++ L ++G+   A  + + M      P   T++ +++
Sbjct: 182 AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC++R  + AL +F  ++  G  P++ TY  LI+GLCK  R + A  +L E+      P
Sbjct: 242 SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMP 301

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+  ++    +  K    L +L  M   G   +   Y +++  +     + EA    
Sbjct: 302 DIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M+T G + +I SYN LIN YCK  +++ A  L +EM  QG   +  ++  LI G C+ 
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G ++ A+     M   G   +L  Y+ ++D   K G +  A  +F +M+      +   Y
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           + +VH +CK+     A KL       G++        +++GL   G   EA
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR-NSLLSCSLDLLDE 102
           TY    DA   F + D      N M      P ++ +  L++   +        + L  +
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M  +G+ P++++ +  M+C  QL + D    V   +I   L P   TF  ++NGLCK   
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+ +F  +   G  P++ TYN +I GLCK G    A  +LK++ ++G  PN +TY+T
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R+R     L+I S MK KG + D F Y ++I    K  R KEA+  + +M +  
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  DIV++N L++ +CKEGK+  A  +L  M + G E +  T++ L+ G     ++  AR
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 398
                M   G   N+ +YN +++   K  +ID A+ +F  M       ++ +Y++++H  
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGF 418

Query: 399 CKAKRLPSASKLL 411
           C+  +L  A  L 
Sbjct: 419 CQLGKLREAQDLF 431



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 161/321 (50%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ TY  LI   C+F  +     +LN M    I PD+VT+N L+    +   +S +
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +L  M EMG+ P+V +Y+SLM+         EA ++F  MI     P   ++NI++NG
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK +  D A+++F  +   G  P  V+YN LI G C+ G+LR A+ + + +  +G+ P+
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY+ ++    +         +  AM+      +   Y  ++ A  K G  K+A     
Sbjct: 443 LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFS 502

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++   G+Q  +  Y T+IN  CKEG L+ A      ME  G   D+ ++ ++I GL +  
Sbjct: 503 ELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHK 562

Query: 337 NIKGARLHLEYMNKIGFDSNL 357
           +   A L +  M   GF +++
Sbjct: 563 DESRALLLVGEMRDRGFIADV 583



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 161/305 (52%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +R ++A A++ +   L ++PD+VT+N+L+D +C+         +L  M E G+ P+
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+SL+ G +  + +  +  L   M+  G  P+++SYN L++   +  + DEA ++F 
Sbjct: 338 VVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFN 397

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   LTP   ++N +++G C+      A  +FR +  +G +P+L TY+IL+ G CK G
Sbjct: 398 EMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQG 457

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  + + +  +   PN + YT ++    ++  +K   ++ S +  +G       Y 
Sbjct: 458 YLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYT 517

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K G L EA +    M  DG   D +SYN +I    +      A LL+ EM  +
Sbjct: 518 TIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDR 577

Query: 317 GFECD 321
           GF  D
Sbjct: 578 GFIAD 582



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 5/355 (1%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP-DEANRVFQDMICGDLTPCTATFNIML 154
           +L   + ML     P +  +  L+  + ++G+  D    + + M    L+P   T +I +
Sbjct: 76  ALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFM 135

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N  C+ +  D    +   + K G  P +VT+  LI GLCK G    A  +  ++   G  
Sbjct: 136 NCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQ 195

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TY TI+    +  +      +L  M+  G   +   Y T+I +  +   + EA D 
Sbjct: 196 PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDI 255

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M   G+  DI +Y +LI   CK  + + A  LL+EM       D  T  +L+D  CK
Sbjct: 256 FSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCK 315

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G +  A   L+ M ++G + N+  Y+ ++        +  A  +F  M  K    + F+
Sbjct: 316 EGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFS 375

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y+ +++  CKAKR+  A +L    +  G+     +   ++ G    G  REA+ +
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 101/202 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  +CKA R+++A  +  + I  G+ P+ V+YN LI  +CQ         +   M  
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+ TY+ L+ G  +   L  +  L   M    + P++  Y  L+H + + G   +
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKD 496

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F ++    L P    +  ++NGLCK    D AL  FR ++  G  P+ ++YN++I+
Sbjct: 497 ARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIR 556

Query: 191 GLCKAGRLRTARWILKELGDSG 212
           GL +      A  ++ E+ D G
Sbjct: 557 GLLQHKDESRALLLVGEMRDRG 578



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 5/265 (1%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAIT 219
           R  D+AL  F  +     +P ++ +  L+  + K G+       L K++   G +PN  T
Sbjct: 71  RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            +  M C  + ++  LG  +L+ + + G       + T+I    K+G   +A +  + MV
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G Q D+ +YNT+IN  CK G+  AA  LL +ME+ G + +  T++ LID LC+   + 
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A     YM   G   ++  Y  ++  L K  +   A  +   M     + D  T++ +V
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVR 420
              CK  ++  A  +L +  + GV 
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVE 335



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 86/172 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+  +L +A+ +  +    G LPD+ TY++L+D +C+       + +   M+ 
Sbjct: 412 NTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P++V Y  L+    ++     +  L  E+   G+ P V  Y ++++ L + G  DE
Sbjct: 472 TYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDE 531

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           A   F++M      P   ++N+++ GL +++    AL +   ++  GF+ ++
Sbjct: 532 ALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 5/174 (2%)

Query: 287 IVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           I+ +  L++   K G+  +    L  +ME  G   + YT +I ++  C+   +      L
Sbjct: 92  IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             + K+G    +  +  +++ L K G+   A+ +F+ M  K    D +TY+++++ LCK 
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               +A+ LL    ++G +        ++D L       EA  I S ++   IS
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS 265



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 45/104 (43%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  I V   CK+   + A  +  +    G+ P V  Y  +I+  C+    D        M
Sbjct: 480 MYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNM 539

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
              G  PD ++YN +I G  ++   S +L L+ EM + G   DV
Sbjct: 540 EADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 215/427 (50%), Gaps = 4/427 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K NR+E A  +  +  RL +   V T+N++++  C+          +  M  
Sbjct: 218 NDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEG 277

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VV+YN++I G +    +  +  +LD M   GI PD ++Y SL+  + + G+ +E
Sbjct: 278 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEE 337

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F  M+   L P   T+N +++G C     + A      + K G +P + TYN+L+ 
Sbjct: 338 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 397

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L   GR+  A  ++KE+   G  P+AITY  ++    R    K   ++ + M  KG   
Sbjct: 398 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 457

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y ++I    +  R+KEA D  E+++  GV  D++ +N +++ +C  G +E A++LL
Sbjct: 458 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 517

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+++    D+ T   L+ G C+ G ++ AR+ L+ M + G   +  +YN ++   G+ 
Sbjct: 518 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G I  A  V + M          TY++++  LCK +    A +LL   +  G+    S  
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637

Query: 427 KAVVDGL 433
            ++++G+
Sbjct: 638 LSLIEGM 644



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 4/267 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    N+ V       R+ +A+ +I +  + G++PD +TYN+LI+ Y +  +    + + 
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLH 447

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLF 123
           N M   GI P  VTY SLI   +R + +  + DL +++L+ G+ PDV  +N+++  HC  
Sbjct: 448 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC-- 505

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  + A  + ++M    + P   TFN ++ G C+    + A  +   +++ G  P+ +
Sbjct: 506 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 565

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YN LI G  + G ++ A  +  E+   G  P  +TY  ++KC  +N++  L  E+L  M
Sbjct: 566 SYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKE 270
             KG + D   Y ++I     +  L E
Sbjct: 626 VNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 39/307 (12%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           +  F++++   C+ R  D A + F  +++ G VP++ T N ++    K  R+  A W+L 
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMA-WVL- 236

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
                        Y  + +           L I S +    YTF+      ++    K G
Sbjct: 237 -------------YAEMFR-----------LRISSTV----YTFN-----IMVNVLCKEG 263

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +LK+A +++  M   G + ++VSYNT+I+ Y   G +E A  +LD M  +G E D YT+ 
Sbjct: 264 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 323

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            LI G+CK G ++ A    + M +IG   N   YN ++D     G ++ A +  + M  K
Sbjct: 324 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 383

Query: 387 DSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
                  TY+ +VH L    R+  A  ++    K G+         +++G    G  ++A
Sbjct: 384 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 443

Query: 443 KKIQSKI 449
             + +++
Sbjct: 444 FDLHNEM 450



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 7/265 (2%)

Query: 197 RLRTARWILKELG---DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           R+ T R +  EL    D     ++I +  +++ C   R+     +    MK KG      
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
               +++ F+K+ R++ A     +M    +   + ++N ++N+ CKEGKL+ A   +  M
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 275

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E  GF+ +  ++  +I G    GNI+GAR  L+ M   G + +   Y  ++  + K+G++
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 335

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A  +F+ M     V ++ TY++++   C    L  A       +K G+    S    +
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
           V  L   G   EA  +  ++R   I
Sbjct: 396 VHALFMEGRMGEADDMIKEMRKKGI 420


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 210/415 (50%), Gaps = 5/415 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+  ++ TY++ I+ +C+         IL +M + G  P +VT NSL+ G    + +S 
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L+D+M+EMG  PD  ++ +L+H LFQ  K  EA  + + M+     P   T+  ++N
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK    D AL +   ++K     ++V YN +I GLCK   +  A  +  ++   G  P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY  ++ C     ++     +LS M  K    D   +  +I AFVK G+L EA    
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343

Query: 276 EQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++MV +     D+V+YNTLI  +CK  ++E    +  EM ++G   +  T+T LI G  +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FT 390
           A +   A++  + M   G   ++  YN ++D L  +G ++ A+ VFE M+ +D      T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y++M+  LCKA ++     L  S    GV+        ++ G    G + EA  +
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 212/413 (51%), Gaps = 5/413 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A AI+   ++LG  P +VT N L++ +C          ++++M E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VT+ +L+ G  +++  S ++ L++ M+  G  PD+ +Y ++++ L + G+PD 
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M  G +      +N +++GLCK ++ D+A  +F  ++  G  P++ TYN LI 
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    P+ + +  ++    +  K     ++   M +  + F
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353

Query: 251 -DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  F K  R++E  +   +M   G+  + V+Y TLI+ + +    + A ++
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M   G   D  T+ IL+DGLC  GN++ A +  EYM K     ++  Y  +++ L K
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            GK++   ++F S+ +K    +  TY++M+   C+      A  L +   + G
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 193/394 (48%), Gaps = 1/394 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +  FC  NR+ +A A++   + +G  PD VT+  L+    Q         ++ RM 
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 207

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD+VTY ++I G  +      +L+LL++M +  I  DV  YN+++  L +    D
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F  M    + P   T+N +++ LC      +A R+   + +    P+LV +N LI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327

Query: 190 KGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
               K G+L  A  +  E+  S H  P+ + Y T++K   + ++ + G+E+   M ++G 
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T+I  F +      A    +QMV+DGV  DI++YN L++  C  G +E A +
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           + + M+K+  + D  T+T +I+ LCKAG ++        ++  G   N+  Y  ++    
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 402
           + G  + A  +F  M+       S   + L +A+
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 168/338 (49%), Gaps = 2/338 (0%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DVV YN +ID  C++   D  + + N+M   GI PDV TYN LI+        S +  LL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCK 159
            +MLE  I PD+  +N+L+    + GK  EA +++ +M+      P    +N ++ G CK
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +  +  + +FR + + G V   VTY  LI G  +A     A+ + K++   G  P+ +T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++     N   +  L +   M+++    D   Y T+I A  K G++++  D    + 
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ ++V+Y T+++ +C++G  E A  L  EM++ G   +  T+  LI    + G+  
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            +   ++ M   GF  +   +  + + L  DG++D + 
Sbjct: 549 ASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 162/325 (49%), Gaps = 1/325 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   ++ A  +       G+ PDV TYN LI   C +  +     +L+ M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGK 127
            E  I+PD+V +N+LI    +   L  +  L DEM++     PDV +YN+L+    +  +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +E   VF++M    L   T T+  +++G  + R  DNA  +F+ +   G  P+++TYNI
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GLC  G + TA  + + +       + +TYTT+++   +  K + G ++  ++  KG
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y T+++ F + G  +EA     +M  DG   +  +YNTLI    ++G   A+ 
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551

Query: 308 LLLDEMEKQGFECDKYTHTILIDGL 332
            L+ EM   GF  D  T  ++ + L
Sbjct: 552 ELIKEMRSCGFAGDASTFGLVTNML 576



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 112/231 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  R+E+   +  +  + G++ + VTY  LI  + Q    D    +  +M  
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TYN L+ G   N  +  +L + + M +  +  D+ +Y +++  L + GK ++
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P   T+  M++G C+    + A  +F  +++ G +P   TYN LI+
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G A +A T+  +       R  K  L++LS
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 4/193 (2%)

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +L +A      MV       IV ++ L++   K  K +    L ++M+  G   + YT++
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 383
           I I+  C+   +  A   L  M K+G+  ++   N +++      +I  A+ + + M   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 384 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               D+ T++++VH L +  +   A  L+   +  G +       AV++GL   G    A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 443 KKIQSKIRMAKIS 455
             + +K+   KI 
Sbjct: 235 LNLLNKMEKGKIE 247


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ +++  A A++   ++LG  P +VT + L++ YC          ++++M E
Sbjct: 86  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD +T+ +LI G   ++  S ++ L+D M++ G  P++ +Y  +++ L + G  D 
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      FN +++ LCK R+ D+AL +F+ ++  G  P +VTY+ LI 
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T+  ++    +  K+    ++   M ++    
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y +++  F    RL +A    E MV+     D+V+YNTLI  +CK  ++E    L 
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 385

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   D  T+T LI GL   G+   A+   + M   G   ++  Y+ ++D L  +
Sbjct: 386 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 445

Query: 371 GKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VF+ M   E+K D + Y++M+  +CKA ++     L  S    GV+      
Sbjct: 446 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 505

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ GL      +EA  +  K++
Sbjct: 506 NTMISGLCSKRLLQEAYALLKKMK 529



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 46/379 (12%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L K EA  I+        DVV +N +ID+ C++   D    +   M   GI P+VVTY
Sbjct: 208 NLLNKMEAAKIEA-------DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           +SLI+        S +  LL +M+E  I P++ ++N+L+    + GK  EA +++ DMI 
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   T+N ++NG C +   D A +MF  +      P++VTYN LIKG CK+ R+  
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              + +E+   G   + +TYTT+++  F +                              
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHD------------------------------ 410

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                G    A    +QMV+DGV  DI++Y+ L++  C  GKLE A  + D M+K   + 
Sbjct: 411 -----GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 465

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D Y +T +I+G+CKAG +         ++  G   N+  YN ++  L     +  A  + 
Sbjct: 466 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525

Query: 381 ESME----VKDSFTYSSMV 395
           + M+    + +S TY++++
Sbjct: 526 KKMKEDGPLPNSGTYNTLI 544



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 187/368 (50%), Gaps = 1/368 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +     +L+ M
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 283

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P++VT+N+LI    +      +  L D+M++  I PD+++YNSL++      + 
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A ++F+ M+  D  P   T+N ++ G CK++  ++   +FR +   G V + VTY  L
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+GL   G    A+ + K++   G  P+ +TY+ ++     N K +  LE+   M++   
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y T+I    K G++ +  D    +   GV+ ++V+YNT+I+  C +  L+ AY 
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL +M++ G   +  T+  LI    + G+   +   +  M    F  +      + + L 
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 582

Query: 369 KDGKIDHA 376
            DG++D +
Sbjct: 583 HDGRLDKS 590



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 200/420 (47%), Gaps = 4/420 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V +N L+ A  +   FD   ++  +M+   I   + TYN LI    R S +S +L 
Sbjct: 44  LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 103

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M+++G  P + + +SL++      +  +A  +   M+     P T TF  +++GL 
Sbjct: 104 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 163

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            +     A+ +   + + G  P LVTY +++ GLCK G    A  +L ++  +    + +
Sbjct: 164 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 223

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            + TI+    + R     L +   M+ KG   +   Y ++I+     GR  +A+  +  M
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 283

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   +  ++V++N LI+ + KEGK   A  L D+M K+  + D +T+  L++G C    +
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A+   E+M       ++  YN ++    K  +++    +F  M     V D+ TY+++
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +  L       +A K+    +  GV         ++DGL ++G   +A ++   ++ ++I
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 108/231 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ R+E    +  +    G++ D VTY  LI         D    +  +M  
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 425

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G   N  L  +L++ D M +  I  D++ Y +++  + + GK D+
Sbjct: 426 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P   T+N M++GLC  R    A  + + +++ G +P   TYN LI+
Sbjct: 486 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  +++E+       +A T   +       R  K  L++LS
Sbjct: 546 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 596



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I+ NGL  +   D+A+ +F G+ K   +P +V +N L+  + K  +      + +++   
Sbjct: 18  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
                  TY  ++ C  R  +  L L +L  M + GY                       
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 113

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                       +  IV+ ++L+N YC   ++  A  L+D+M + G+  D  T T LI G
Sbjct: 114 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 161

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
           L        A   ++ M + G   NL  Y  +V+ L K G  D A+N+   ME      D
Sbjct: 162 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 221

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              +++++ +LCK + +  A  L       G+R       +++  L   G   +A ++ S
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 281

Query: 448 KIRMAKIS 455
            +   KI+
Sbjct: 282 DMIEKKIN 289


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ +++  A A++   ++LG  P +VT + L++ YC          ++++M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD +T+ +LI G   ++  S ++ L+D M++ G  P++ +Y  +++ L + G  D 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      FN +++ LCK R+ D+AL +F+ ++  G  P +VTY+ LI 
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T+  ++    +  K+    ++   M ++    
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y +++  F    RL +A    E MV+     D+V+YNTLI  +CK  ++E    L 
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   D  T+T LI GL   G+   A+   + M   G   ++  Y+ ++D L  +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483

Query: 371 GKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VF+ M   E+K D + Y++M+  +CKA ++     L  S    GV+      
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ GL      +EA  +  K++
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMK 567



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 46/379 (12%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L K EA  I+        DVV +N +ID+ C++   D    +   M   GI P+VVTY
Sbjct: 246 NLLNKMEAAKIEA-------DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           +SLI+        S +  LL +M+E  I P++ ++N+L+    + GK  EA +++ DMI 
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   T+N ++NG C +   D A +MF  +      P++VTYN LIKG CK+ R+  
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              + +E+   G   + +TYTT+++  F +                              
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHD------------------------------ 448

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                G    A    +QMV+DGV  DI++Y+ L++  C  GKLE A  + D M+K   + 
Sbjct: 449 -----GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D Y +T +I+G+CKAG +         ++  G   N+  YN ++  L     +  A  + 
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563

Query: 381 ESME----VKDSFTYSSMV 395
           + M+    + +S TY++++
Sbjct: 564 KKMKEDGPLPNSGTYNTLI 582



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 187/368 (50%), Gaps = 1/368 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +     +L+ M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P++VT+N+LI    +      +  L D+M++  I PD+++YNSL++      + 
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A ++F+ M+  D  P   T+N ++ G CK++  ++   +FR +   G V + VTY  L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+GL   G    A+ + K++   G  P+ +TY+ ++     N K +  LE+   M++   
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y T+I    K G++ +  D    +   GV+ ++V+YNT+I+  C +  L+ AY 
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL +M++ G   +  T+  LI    + G+   +   +  M    F  +      + + L 
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 620

Query: 369 KDGKIDHA 376
            DG++D +
Sbjct: 621 HDGRLDKS 628



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 200/420 (47%), Gaps = 4/420 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V +N L+ A  +   FD   ++  +M+   I   + TYN LI    R S +S +L 
Sbjct: 82  LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M+++G  P + + +SL++      +  +A  +   M+     P T TF  +++GL 
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            +     A+ +   + + G  P LVTY +++ GLCK G    A  +L ++  +    + +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            + TI+    + R     L +   M+ KG   +   Y ++I+     GR  +A+  +  M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   +  ++V++N LI+ + KEGK   A  L D+M K+  + D +T+  L++G C    +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A+   E+M       ++  YN ++    K  +++    +F  M     V D+ TY+++
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +  L       +A K+    +  GV         ++DGL ++G   +A ++   ++ ++I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 108/231 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ R+E    +  +    G++ D VTY  LI         D    +  +M  
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G   N  L  +L++ D M +  I  D++ Y +++  + + GK D+
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P   T+N M++GLC  R    A  + + +++ G +P   TYN LI+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  +++E+       +A T   +       R  K  L++LS
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 634



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I+ NGL  +   D+A+ +F G+ K   +P +V +N L+  + K  +      + +++   
Sbjct: 56  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
                  TY  ++ C  R  +  L L +L  M + GY                       
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 151

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                       +  IV+ ++L+N YC   ++  A  L+D+M + G+  D  T T LI G
Sbjct: 152 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
           L        A   ++ M + G   NL  Y  +V+ L K G  D A+N+   ME      D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              +++++ +LCK + +  A  L       G+R       +++  L   G   +A ++ S
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319

Query: 448 KIRMAKIS 455
            +   KI+
Sbjct: 320 DMIEKKIN 327


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 228/454 (50%), Gaps = 11/454 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---QFVSFDA 60
           K S+ + ++ V +  + N + KA +I+      G +P V++YN ++DA     Q V    
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G  I   M E+G+SP+V TYN LI G      L   L    EM   G  P+V +YN+++ 
Sbjct: 189 G--IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +L K  EA ++ + M    L P   ++N+++NGLC+         +   + K  +VP
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           + VT+N LI G C  G    A  +  E+  +G +PN +TYTT++    +       +E L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ +G   +G  Y T+I  F + G LK+A   M++MV +G    I++YN LIN +C  
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA 359
           G++E A  LL EM ++GF  D  +++ +I G C+   ++ A +L +E + K G   ++  
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVAT 485

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y+ ++  L K  ++    ++F+ M       D  TY+S+++  C    L  A +L    +
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + G          +++G       +EAK++  K+
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 226/492 (45%), Gaps = 60/492 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC A  LE       +  R G LP+VVTYN +IDAYC+       + +L  M  
Sbjct: 207 NILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL 266

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P++++YN +I G  R   +  + ++L+EM +    PD  ++N+L++    +G   +
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ 326

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCK----NR------------------------- 161
           A  +  +M+   L+P   T+  ++N +CK    NR                         
Sbjct: 327 ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386

Query: 162 ------YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                 +   A ++ + + ++GF P ++TYN LI G C  GR+  A  +L+E+ + G  P
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y+TI+    RN++ +   ++   M  KG + D   Y ++I    K  RL E  D  
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M++ G+  D V+Y +LIN YC EG L+ A  L DEM ++GF  D  T+ +LI+G  K 
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566

Query: 336 GNIKGAR---LHLEYMNKIGFDSNLEAYNCIVDRLGK---------------DGKIDHAI 377
              K A+   L L Y   +    N   YN ++D                    G ++ A 
Sbjct: 567 SRTKEAKRLLLKLLYEESV---PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEAD 623

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            V ESM  K    +   Y+ ++H   K   +  A  L    L SG         A+   L
Sbjct: 624 RVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683

Query: 434 RHSGCRREAKKI 445
            H G   E  ++
Sbjct: 684 YHEGKEVELNQL 695



 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 197/394 (50%), Gaps = 4/394 (1%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           AE I  + +  GV P+V TYN+LI  +C   + + G      M   G  P+VVTYN++I 
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
              +   +  +  LL  M   G+ P++ SYN +++ L + G+  E + + ++M      P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              TFN ++NG C       AL +   + K+G  P +VTY  LI  +CKAG L  A   L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
            ++ D G  PN  TYTT++    +    K   +I+  M   G+T     Y  +I     +
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GR+++A+  +++M+  G   D+VSY+T+I+ +C+  +LE A+ L  EM  +G   D  T+
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
           + LI GLCK   +       + M  +G   +   Y  +++    +G +D A+ + + M  
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           K    D  TY+ +++   K  R   A +LLL  L
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 220/442 (49%), Gaps = 20/442 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+  ++++   I+ +  +   +PD VT+N LI+ YC   +F     +   M +
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+VVTY +LI    +   L+ +++ LD+M + G+ P+  +Y +L+    Q G   +
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M+    TP   T+N ++NG C     ++A  + + + + GF+P++V+Y+ +I 
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+   L  A  +  E+   G +P+  TY+++++   + R+     ++   M   G   
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I A+   G L +A    ++M+  G   DIV+YN LIN + K+ + + A  LL
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576

Query: 311 DEMEKQGFECDKYTHTILID---------------GLCKAGNIKGARLHLEYMNKIGFDS 355
            ++  +    ++ T+  LID               G C  G +  A   LE M + G+  
Sbjct: 577 LKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKL 636

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N E YN I+    K G I+ A N+++ M        S T  ++  +L    +    ++LL
Sbjct: 637 NEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696

Query: 412 LSCLKSGVRILKSAQKAVVDGL 433
              LKS  RI ++A   V+ G+
Sbjct: 697 DYTLKS-CRITEAALAKVLIGI 717



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 184/381 (48%), Gaps = 28/381 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   L++A  I+ + +  G  P ++TYN LI+ +C     +    +L  M E G  PD
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+Y+++I+G  RN  L  +  L  EM+  GI PDV +Y+SL+  L +  +  E   +FQ
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P   T+  ++N  C     D ALR+   + + GF P++VTYN+LI G  K  
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R + A+ +L +L      PN ITY T++  C  N ++K  L ++             G+C
Sbjct: 568 RTKEAKRLLLKLLYEESVPNEITYNTLIDNC-NNLEFKSALALMK------------GFC 614

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                    G + EA   +E M+  G +L+   YN +I+ + K G +E AY L  EM   
Sbjct: 615 MK-------GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHL----EYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           GF      H++ I  L K+   +G  + L    +Y  K    +       ++    K+G 
Sbjct: 668 GFA----PHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGN 723

Query: 373 IDHAINVFESMEVKDSFTYSS 393
           +D   NV + M +     YSS
Sbjct: 724 MDAVFNVLKDMALSGLLPYSS 744


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 225/450 (50%), Gaps = 4/450 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +++T  LNI V ++CK  +  + + +I +  +  V PDVVT+N+++DA  +    +A   
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +++ M   GI P +VTYNS++ G  RN     + ++   M   G+ PDV S+N L+    
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ +EA R +++M    +TP   +F+ ++    +    D+A    R +++ G +P+ V
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y ++I G C+AG +  A  +  E+   G  P+ +TY T++    + R+     E+L+ M
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +G   D   + T+I  + + G +++A  + + +    ++ DIV+YNTLI+  C++G L
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L D+M  +    +  T++ILID  C+ G +  A   L+ M   G   N+  YN I
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    + G +         M     + D  TY++++H   K  ++  A  LL       V
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENV 575

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +        ++ G    G  +EA  +  K+
Sbjct: 576 QPDAVTYNMIISGFSVHGNMQEADWVYKKM 605



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 178/358 (49%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N+ +  FC+A  LE+A     +     V PDVV+++ LI  + +    D     L  
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MRE G+ PD V Y  +I G  R  L+  +L + DEM+  G  PDV +YN+L++ L +  +
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A  +  +M    + P   TF  +++G C++   + AL+ F  +      P++VTYN 
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G+C+ G L  A  +  ++      PN +TY+ ++       +       L  M  KG
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y ++I  + + G + +   ++ +M  D V  D+++YNTLI+ Y KEGK+  A+
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
            LL  ME +  + D  T+ ++I G    GN++ A    + M   G + +   Y  +++
Sbjct: 565 NLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 176/335 (52%), Gaps = 1/335 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   ++ A   + +    G++PD V Y M+I  +C+         + + M   G  PD
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPD 368

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G  +   LS + +LL+EM E G+PPD+ ++ +L+H   + G  ++A + F 
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    L P   T+N +++G+C+      A  ++  +      P  VTY+ILI   C+ G
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKG 488

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A   L E+ + G  PN +TY +I+K   R+     G + L  M+      D   Y 
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  +VK G++ EA + ++ M  + VQ D V+YN +I+ +   G ++ A  +  +M  +
Sbjct: 549 TLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGAR 608

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK 350
           G E D+YT+  +I+G   AGN K + +LH E + K
Sbjct: 609 GIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 183/395 (46%), Gaps = 4/395 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I++ +  +  +P    ++ LI   T++     + +    +L+  +P    + N+L+  L 
Sbjct: 76  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALS 135

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G P      ++ ++  +    T T NIM++  CK         +   ++K    P++V
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+++    +AG +  A  ++  +   G  P  +TY +++K   RN ++    E+  AM
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   D   +  +I  F + G L+EA  + ++M    V  D+VS++ LI L+ + G++
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A   L EM + G   D   +T++I G C+AG +  A    + M   G   ++  YN +
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K+ ++  A  +   M+ +    D  T+++++H  C+   +  A +   +     +
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           R        ++DG+   G   +A ++   +   +I
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREI 470



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 104/206 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   L KA  +  D     + P+ VTY++LID++C+    D  +  L+ M  
Sbjct: 443 NTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVN 502

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+++TYNS+I G  R+  +S     L +M    + PD+ +YN+L+H   + GK  E
Sbjct: 503 KGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHE 562

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M   ++ P   T+N++++G   +     A  +++ +   G  P+  TY  +I 
Sbjct: 563 AFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622

Query: 191 GLCKAGRLRTARWILKELGDSGHAPN 216
           G   AG  + +  +  E+   G AP+
Sbjct: 623 GHVVAGNSKKSFQLHDEMLQKGLAPD 648


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 228/474 (48%), Gaps = 44/474 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA RL  A  ++ + +    +PD  T  +++ + C     D    ++  M   G++ + +
Sbjct: 51  KARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI 110

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY++L+ G  +   L  ++ L++ M E G  P V +YNS++    +  + DEA+   + M
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P   T+  ++ G CK+R     L +   + + GF P++VTY+ +I GLCKAGRL
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           R A  I +E+     AP AITY +++    R       + +L  M       D   Y T+
Sbjct: 231 RDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTL 287

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           ++AF K+GRL +A +  +QMV + +  D+V++ +L++  C EG++E A  LL+E+ ++G 
Sbjct: 288 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 347

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV-------------- 364
               YT+  ++DG CKA  ++ A   +      GF  N   YN +V              
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407

Query: 365 -----------------------DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
                                  D L +DG+ D A+  +E M     V  + T++++V  
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           LCKA +   A +LL   +K G         AVV     +G  ++A ++ S++R+
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 521



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 37/408 (9%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  + +N++I   C+         +  +M +A   PD +TY  L+ G ++   L  ++ +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L EM+     PD  +   ++  L    + D+A  + ++M+   +     T++ +++GLCK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ +   + + G  P +VTYN +I G C+A R+  A   ++++   G  P+ IT
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ-- 277
           YT ++    ++R    GLE+L  + R+G+T D   Y TVI    K GRL++A D  E+  
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 278 ------------------------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                                         MV D    D+V+Y TL++ +CK G+L+ AY
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  +M       D  T T L+DGLC  G ++ A   LE + + G    +  YNC+VD  
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            K  ++  A  +         V ++ TY+ +V   C+A R   A + L
Sbjct: 362 CKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 409



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 5/327 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK+  + +   ++ +  R G  PD+VTY+ +ID  C+         I   M     +P 
Sbjct: 189 FCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPT 245

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYNSLI G  R   +  ++ LL +M++    PDV +Y +LM    ++G+ D+A  +FQ
Sbjct: 246 AITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQ 305

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L+P   TF  +++GLC     ++AL +   + + G  P + TYN ++ G CKA 
Sbjct: 306 QMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKAN 365

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FG 254
           ++R A  ++ +    G  PN +TY  ++  C R  +    L+ L  +  +G         
Sbjct: 366 QVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAM 425

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++ A  + GR  +A  + E+M+  G      ++ T++   CK  + + A+ LL+EM 
Sbjct: 426 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 485

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGA 341
           K G      T   ++   C+AG I+ A
Sbjct: 486 KYGHTPGPGTCDAVVSAYCRAGMIQKA 512


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 222/487 (45%), Gaps = 74/487 (15%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV TY+ LI+AYC+    ++   ++  MRE G S +VVTYN+LI G  R   +  +
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                EM + G+ PD ++Y ++++ L + G+PD+A  +  +M C  L P    ++ +++G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             +    D A ++ + +   G  P  +TY+ LI+GLCK GR+  A  ILK++   G+  +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  +++   R    +    +L+ M++ G + + + Y  +I    +IG  + A+  +E
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 277 QMVTDGVQLDIVSYNTLINLYCKE-----------------------------------G 301
           QM+ DG++ +   Y  LI+ YC+E                                   G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN----- 356
           K++ A    DEM ++GF+ + +T+  LI G   AGN++ A   L  M   G + N     
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYA 597

Query: 357 --LEA----------------------------YNCIVDRLGKDGKIDHAINVFESME-- 384
             LE                             Y  ++  L   G +  A++V   +E  
Sbjct: 598 QILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN 657

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             V DS  Y S++   CKA  +  A  LL    K G+    S   A++DG   S     A
Sbjct: 658 GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHA 717

Query: 443 KKIQSKI 449
           + I + I
Sbjct: 718 RNIFNSI 724



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 206/442 (46%), Gaps = 11/442 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+ +A  I+    ++G + D +TYN++I+ + +  + +  + +LN MR+ GISP+
Sbjct: 393 LCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPN 452

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY+ +I G  +      +  LL++M+  G+ P+ + Y  L+    + G    A    +
Sbjct: 453 VYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLK 512

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   +LTP    +N ++ GL      D A+  +  + + GF P   TY  LI G   AG
Sbjct: 513 KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  +L ++ +SG  PN   Y  I++  F++   +     L +M  KG   D   Y 
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYG 632

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI      G ++ A   +  +  +G+  D + Y +LI+ +CK   +E A  LLDEM K+
Sbjct: 633 IVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E     +  LIDG CK+ +I  AR     +   G   N   Y  ++D   K G I  A
Sbjct: 693 GIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDA 752

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I+++  M  +    D+F YS +      +  L  A  +    +  G  I+ S      + 
Sbjct: 753 IDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS-----FNT 807

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
           L H  C+R   K+Q  ++   +
Sbjct: 808 LVHGFCKR--GKLQETVKFLHV 827



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 4/277 (1%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V  ++L+    K GR+R    ++  + D G AP+      ++K   R     L  ++   
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+  G + D + Y T+I A+ K+  L+ A   +E+M   G  L++V+YNTLI   C+ G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +E A+    EME  G   D +T+  +I+GLCK G    A+  L+ M+  G   N+  Y+ 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++D   + G  D A  + + M       +  TY +++  LCK  R+  AS++L    K G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                     V++G      + EA  + +++R   IS
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGIS 450



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 22/224 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK++ +  A  I    I  G+ P+ VTY  LID YC+         + N M  
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD   Y+ L AG + +  L  +L + +EM+  G    + S+N+L+H   + GK  E
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQE 820

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGL--------------------CKNRYTDNALRMF 170
             +    M+  D+ P   T   ++ GL                      +R TD+   +F
Sbjct: 821 TVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLF 880

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             +   G VP  V +N +I+  CK G L  A  +   L   G A
Sbjct: 881 TDMINQGLVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKGRA 923


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+ ++L  A AI+   ++LG  P +VT N L++ +C          ++++M E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VT+ +L+ G  +++  S ++ L++ M+  G  PD+ +Y ++++ L + G+PD 
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M  G +      ++ +++ LCK R+ D+AL +F  +   G  P++ TY+ LI 
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T+ +++    +  K     ++   M ++    
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I  F    RL EA      MV+     D+V+YNTLIN +CK  K+     L 
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M ++G   +  T+T LI G  +A +   A++  + M   G   N+  YN ++D L K+
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++      D +TY+ M   +CKA ++     L  S    GV+    A 
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G + EA  +  K++
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMK 547



 Score =  201 bits (511), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 201/381 (52%), Gaps = 4/381 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           + N+  +A A++   +  G  PD+VTY  +I+  C+    D    +LN+M +  I  DVV
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y+++I    +   +  +L+L  EM   GI PDV++Y+SL+ CL   G+  +A+R+  DM
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   + P   TFN +++   K      A ++F  + +    P +VTYN LI G C   RL
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A+ I   +      P+ +TY T++    + +K   G+E+   M R+G   +   Y T+
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I  F +      A    +QMV+DGV  +I++YNTL++  CK GKLE A ++ + ++K   
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E D YT+ I+ +G+CKAG ++        ++  G   ++ AYN ++    K G  + A  
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 379 VFESME----VKDSFTYSSMV 395
           +F  M+    + DS TY++++
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLI 562



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 182/359 (50%), Gaps = 1/359 (0%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK   ++ A  +  +    G+ PDV TY+ LI   C +  +     +L+ M E  I+P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVT+NSLI    +   L  +  L DEM++  I P++ +YNSL++      + DEA ++F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+  D  P   T+N ++NG CK +   + + +FR + + G V   VTY  LI G  +A
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A+ + K++   G  PN +TY T++    +N K +  + +   +++     D + Y
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +     K G++++  D    +   GV+ D+++YNT+I+ +CK+G  E AY L  +M++
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            G   D  T+  LI    + G+   +   ++ M    F  +   Y  + D L  DG++D
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLD 606



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 209/437 (47%), Gaps = 4/437 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L++A  +  + ++    P +V ++ L+ A  +   FD   +   +M   G+S ++ TYN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            +I    R S LS +L +L +M+++G  P + + NSL++      +  EA  +   M+  
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P T TF  +++GL ++     A+ +   +   G  P+LVTY  +I GLCK G    A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L ++       + + Y+T++    + R     L + + M  KG   D F Y ++I+ 
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V++N+LI+ + KEGKL  A  L DEM ++  + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+  LI+G C    +  A+     M       ++  YN +++   K  K+   + +F 
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M     V ++ TY++++H   +A    +A  +    +  GV         ++DGL  +G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 438 CRREAKKIQSKIRMAKI 454
              +A  +   ++ +K+
Sbjct: 465 KLEKAMVVFEYLQKSKM 481



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 170/368 (46%), Gaps = 4/368 (1%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +  D    +   M ++   P +V ++ L++   +       +   ++M  +G+  ++++Y
Sbjct: 44  LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N +++CL +  +   A  +   M+     P   T N +LNG C       A+ +   + +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G+ P+ VT+  L+ GL +  +   A  +++ +   G  P+ +TY  ++    +  +  L
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            L +L+ M++     D   Y TVI +  K   + +A +   +M   G++ D+ +Y++LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             C  G+   A  LL +M ++    +  T   LID   K G +  A    + M +   D 
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 411
           N+  YN +++      ++D A  +F  M  KD      TY+++++  CKAK++    +L 
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 412 LSCLKSGV 419
               + G+
Sbjct: 404 RDMSRRGL 411



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 1/261 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC  +RL++A+ I    +    LPDVVTYN LI+ +C+      G  +   M  
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + VTY +LI G  + S    +  +  +M+  G+ P++ +YN+L+  L + GK ++
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF+ +    + P   T+NIM  G+CK    ++   +F  L   G  P+++ YN +I 
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G    A  +  ++ + G  P++ TY T+++   R+       E++  M+   +  
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588

Query: 251 DGFGYCTVIAAFVKIGRLKEA 271
           D   Y  ++   +  GRL + 
Sbjct: 589 DASTY-GLVTDMLHDGRLDKG 608



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 114/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA ++     +  D  R G++ + VTY  LI  + Q    D    +  +M  
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+++TYN+L+ G  +N  L  ++ + + + +  + PD+++YN +   + + GK ++
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P    +N M++G CK    + A  +F  +++ G +P+  TYN LI+
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+     A +A TY  +       R  K  LE+LS
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 10/290 (3%)

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F GL   G+  E ++ N L+       +L  A  +  E+  S   P+ + ++ ++    +
Sbjct: 24  FSGLSYDGY-REKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAK 77

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            +K+ L +     M+  G + + + Y  +I    +  +L  A   + +M+  G    IV+
Sbjct: 78  MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            N+L+N +C   ++  A  L+D+M + G++ D  T T L+ GL +      A   +E M 
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
             G   +L  Y  +++ L K G+ D A+N+   ME      D   YS+++ +LCK + + 
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A  L       G+R       +++  L + G   +A ++ S +   KI+
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 220/443 (49%), Gaps = 8/443 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C A  + KA  + +   R G  P+V  +  LI   C+         + + M +
Sbjct: 142 TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 201

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V+TYN++I G ++   ++ +L + + M + G  PD W+YN+L++ L    K +E
Sbjct: 202 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEE 260

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  + +    TP   TF  ++NG C     D+ALRM   +       +L  +  LI 
Sbjct: 261 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 320

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K  RL+ A+ +L E+  +G  PN ITYT+I+    ++ K  + LE+L  M+R G   
Sbjct: 321 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 380

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y +++   VK  +L +A   + +M  DG+  ++++Y TL+   C E   + A+ L 
Sbjct: 381 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + ME+ G + D++ + +L D LCKAG  + A     ++ + G       Y  ++D   K 
Sbjct: 441 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKA 497

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A  + E M       DS+TYS ++H LCK KRL  A  +L      G++    A 
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
             ++D +   G    AK++ +++
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEM 580



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 199/432 (46%), Gaps = 33/432 (7%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           +FGKL   L+        K +RL++A+ ++ +    G++P+V+TY  +ID YC+    D 
Sbjct: 314 VFGKLINSLI--------KKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 365

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L  M   G  P+  TYNSL+ G  ++  L  ++ LL +M + GI P+V +Y +L+ 
Sbjct: 366 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 425

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                   D A R+F+ M    L P    + ++ + LCK    + A   +  + + G   
Sbjct: 426 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVAL 482

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             V Y  LI G  KAG    A  +++ + D G  P++ TY+ ++    + ++    L IL
Sbjct: 483 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 542

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G     F Y  +I   ++ G+   A     +M + G +    +Y   IN YCKE
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 602

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+LE A  L+ +ME++G   D  T+ ILIDG    G I  A   L+ M     + N   Y
Sbjct: 603 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 662

Query: 361 NCIVDRLGKDG----------------KIDHAINVFESMEVKDSF-----TYSSMVHNLC 399
             ++  L K                  ++D    + E M VK        TYSS++   C
Sbjct: 663 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM-VKHGLNPTVTTYSSLIAGFC 721

Query: 400 KAKRLPSASKLL 411
           KA RL  A  LL
Sbjct: 722 KAGRLEEACLLL 733



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 215/473 (45%), Gaps = 45/473 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS +  N  + +  + +  E    +    ++ G+LPD VTYN +I +YC+       +  
Sbjct: 31  LSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRY 90

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              + E G+ P+  T N+L+ G  R   L  +  L   M  MG   + +SY  L+  L  
Sbjct: 91  FRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCD 150

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                +A  +F  M     +P    F  +++GLCK+    +A  +F  + ++G VP ++T
Sbjct: 151 AKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 210

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGLEILSAM 243
           YN +I G  K GR+  A  I + +  +G  P+  TY T I   C  ++K +   E+L+  
Sbjct: 211 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC--DQKTEEAEELLNNA 268

Query: 244 KRKGY-----TFDGF--GYC----------------------------TVIAAFVKIGRL 268
            ++G+     TF     GYC                             +I + +K  RL
Sbjct: 269 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 328

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           KEA + + ++  +G+  ++++Y ++I+ YCK GK++ A  +L  ME+ G + + +T+  L
Sbjct: 329 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 388

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           + GL K   +  A   L  M K G   N+  Y  ++     +   D+A  +FE ME    
Sbjct: 389 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 448

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             D   Y+ +   LCKA R   A   +   ++ GV + K     ++DG   +G
Sbjct: 449 KPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAG 498



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 178/384 (46%), Gaps = 19/384 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R E+A + I+   R GV    V Y  LID + +  + D   T++ RM + G +PD
Sbjct: 462 LCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 518

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY+ L+    +   L+ +L +LD+M   GI   +++Y  L+  + + GK D A R++ 
Sbjct: 519 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 578

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+ + +N  CK    ++A  +   +++ G  P++VTYNILI G    G
Sbjct: 579 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 638

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR----------------KYKLGLEIL 240
            +  A   LK +  +   PN  TY  ++K   +                  +  +  ++L
Sbjct: 639 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 698

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + G       Y ++IA F K GRL+EA   ++ M   G+  +   Y  LI   C  
Sbjct: 699 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 758

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
              E A   +  M + GF+    ++ +L+ GLC  G+ +  +     + ++G++ +  A+
Sbjct: 759 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 818

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             + D L K G +D    +   ME
Sbjct: 819 KILNDGLLKAGYVDICFQMLSIME 842



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 173/403 (42%), Gaps = 41/403 (10%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           VS DA   I  R   A ++     YN  +    R  +      +  ++++ G+ PD  +Y
Sbjct: 13  VSADAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 71

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N+++    + G    A+R F+ ++ G L P T T N ++ G C+      A  +F  +  
Sbjct: 72  NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 131

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G      +Y ILI+GLC A  +R A  +   +   G +PN   +T ++    ++ +   
Sbjct: 132 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 191

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +  AM + G       Y  +I  + K+GR+ +A    E M  +G   D  +YNTLI 
Sbjct: 192 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 251

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------RL 343
             C + K E A  LL+   K+GF     T T LI+G C A     A            +L
Sbjct: 252 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 310

Query: 344 HLEYMNKI-----------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
            L+   K+                       G   N+  Y  I+D   K GK+D A+ V 
Sbjct: 311 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 370

Query: 381 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + ME      +++TY+S+++ L K K+L  A  LL    K G+
Sbjct: 371 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 51/116 (43%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCKA RLE+A  ++      G+ P+   Y +LI   C    F+   + ++ M E G 
Sbjct: 717 IAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGF 776

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            P + +Y  L+ G            L  ++LE+G   D  ++  L   L + G  D
Sbjct: 777 QPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 832


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 220/443 (49%), Gaps = 8/443 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C A  + KA  + +   R G  P+V  +  LI   C+         + + M +
Sbjct: 257 TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V+TYN++I G ++   ++ +L + + M + G  PD W+YN+L++ L    K +E
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEE 375

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  + +    TP   TF  ++NG C     D+ALRM   +       +L  +  LI 
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K  RL+ A+ +L E+  +G  PN ITYT+I+    ++ K  + LE+L  M+R G   
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 495

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y +++   VK  +L +A   + +M  DG+  ++++Y TL+   C E   + A+ L 
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + ME+ G + D++ + +L D LCKAG  + A     ++ + G       Y  ++D   K 
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A  + E M       DS+TYS ++H LCK KRL  A  +L      G++    A 
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
             ++D +   G    AK++ +++
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEM 695



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 199/432 (46%), Gaps = 33/432 (7%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           +FGKL   L+        K +RL++A+ ++ +    G++P+V+TY  +ID YC+    D 
Sbjct: 429 VFGKLINSLI--------KKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L  M   G  P+  TYNSL+ G  ++  L  ++ LL +M + GI P+V +Y +L+ 
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                   D A R+F+ M    L P    + ++ + LCK    + A   +  + + G   
Sbjct: 541 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVAL 597

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             V Y  LI G  KAG    A  +++ + D G  P++ TY+ ++    + ++    L IL
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G     F Y  +I   ++ G+   A     +M + G +    +Y   IN YCKE
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+LE A  L+ +ME++G   D  T+ ILIDG    G I  A   L+ M     + N   Y
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 777

Query: 361 NCIVDRLGKDG----------------KIDHAINVFESMEVKDSF-----TYSSMVHNLC 399
             ++  L K                  ++D    + E M VK        TYSS++   C
Sbjct: 778 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM-VKHGLNPTVTTYSSLIAGFC 836

Query: 400 KAKRLPSASKLL 411
           KA RL  A  LL
Sbjct: 837 KAGRLEEACLLL 848



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 215/473 (45%), Gaps = 45/473 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS +  N  + +  + +  E    +    ++ G+LPD VTYN +I +YC+       +  
Sbjct: 146 LSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRY 205

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              + E G+ P+  T N+L+ G  R   L  +  L   M  MG   + +SY  L+  L  
Sbjct: 206 FRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCD 265

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                +A  +F  M     +P    F  +++GLCK+    +A  +F  + ++G VP ++T
Sbjct: 266 AKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 325

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGLEILSAM 243
           YN +I G  K GR+  A  I + +  +G  P+  TY T I   C  ++K +   E+L+  
Sbjct: 326 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC--DQKTEEAEELLNNA 383

Query: 244 KRKGY-----TFDGF--GYC----------------------------TVIAAFVKIGRL 268
            ++G+     TF     GYC                             +I + +K  RL
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           KEA + + ++  +G+  ++++Y ++I+ YCK GK++ A  +L  ME+ G + + +T+  L
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           + GL K   +  A   L  M K G   N+  Y  ++     +   D+A  +FE ME    
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             D   Y+ +   LCKA R   A   +   ++ GV + K     ++DG   +G
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAG 613



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 178/384 (46%), Gaps = 19/384 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R E+A + I+   R GV    V Y  LID + +  + D   T++ RM + G +PD
Sbjct: 577 LCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY+ L+    +   L+ +L +LD+M   GI   +++Y  L+  + + GK D A R++ 
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+ + +N  CK    ++A  +   +++ G  P++VTYNILI G    G
Sbjct: 694 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR----------------KYKLGLEIL 240
            +  A   LK +  +   PN  TY  ++K   +                  +  +  ++L
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + G       Y ++IA F K GRL+EA   ++ M   G+  +   Y  LI   C  
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
              E A   +  M + GF+    ++ +L+ GLC  G+ +  +     + ++G++ +  A+
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             + D L K G +D    +   ME
Sbjct: 934 KILNDGLLKAGYVDICFQMLSIME 957



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 173/403 (42%), Gaps = 41/403 (10%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           VS DA   I  R   A ++     YN  +    R  +      +  ++++ G+ PD  +Y
Sbjct: 128 VSADAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N+++    + G    A+R F+ ++ G L P T T N ++ G C+      A  +F  +  
Sbjct: 187 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G      +Y ILI+GLC A  +R A  +   +   G +PN   +T ++    ++ +   
Sbjct: 247 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +  AM + G       Y  +I  + K+GR+ +A    E M  +G   D  +YNTLI 
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------RL 343
             C + K E A  LL+   K+GF     T T LI+G C A     A            +L
Sbjct: 367 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425

Query: 344 HLEYMNKI-----------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
            L+   K+                       G   N+  Y  I+D   K GK+D A+ V 
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 381 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + ME      +++TY+S+++ L K K+L  A  LL    K G+
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 51/116 (43%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCKA RLE+A  ++      G+ P+   Y +LI   C    F+   + ++ M E G 
Sbjct: 832 IAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGF 891

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            P + +Y  L+ G            L  ++LE+G   D  ++  L   L + G  D
Sbjct: 892 QPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 947


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 232/510 (45%), Gaps = 82/510 (16%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ V T C    L  A A +      G+ PD VTYN L++A+C+         +L RM+
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+P   TYN+L++   R   +  +  +++ M   G  PD+ +YN L   L Q GK D
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330

Query: 130 EANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA R+  +M       P   T+N +++   K R + +ALR+   ++  G  P LVT+NI+
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRN---------------- 230
           +K LCK G+L  A   L+++ + G AP+ ITY T++   C   N                
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450

Query: 231 -----------------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK--------- 264
                            ++Y+   E+L +  ++G+  D   Y TV+AA+ K         
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510

Query: 265 --------------------------IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
                                     + RLKEA D + ++V  G+  D  +YN +I+ YC
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEG LE A+   ++M +  F+ D  T   L++GLC  G +  A    E   + G   ++ 
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++  + K G +D A++ F+ MEVK    D+FTY+ ++  L +A R   A  +L   
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 415 LKSG-------VRILKSAQKAVVDGLRHSG 437
             SG         +LK +     D   H G
Sbjct: 691 ADSGKLSQSFACPLLKPSSADEADVKEHEG 720



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 220/483 (45%), Gaps = 41/483 (8%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           R  N+     C+A ++++A  +  +  RL   LPDVVTYN L+DA  ++        +L 
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLE 373

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR+ G+ P +VT+N ++    +   L  +L  L+++ E G+ PDV +YN+L+    + G
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  +  +M+   L   T T N +L  LCK +  ++A  +     + GFVP+ V+Y 
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++    K      A  +  ++ +    P+  TY T++K   R  + K  ++ L+ +  K
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I A+ K G L+ A  +  +MV +  + D+V+ NTL+N  C  GKL+ A
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L +   ++G + D  T+  LI  +CK G++  A    + M   G   +   YN ++  
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 367 LGKDGKIDHAINVF----ESMEVKDSF--------------------------------- 389
           L + G+ + A N+     +S ++  SF                                 
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDN 733

Query: 390 ---TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
              TY   ++ LC   +L  A  +L   ++ G+ +  S    +++GL     R+     Q
Sbjct: 734 ALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHAAGQ 793

Query: 447 SKI 449
           S +
Sbjct: 794 STL 796



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 193/392 (49%), Gaps = 7/392 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSF--DAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           R GV P +   N ++ A  +  S    A   +   + E  + P+  T+N L+        
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           L+ +L  L  M   G+ PD  +YN+L++   + G   EA  +   M    + P   T+N 
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++   +  +   A ++   +  +GF P+L TYN+L  GLC+AG++  A  +  E+    
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 213 HA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
            A P+ +TY T++  CF+ R     L +L  M+ KG       +  V+ +  K G+L+EA
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +E++  +G+  D+++YNTLI+ YCK G +  A+ L+DEM  +G + D +T   ++  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 387
           LCK    + A   L    + GF  +  +Y  ++    K+   + A+ +++ M     +  
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             TY++++  LC+ +RL  A   L   ++ G+
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGL 555



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 161/332 (48%), Gaps = 1/332 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+ T  LN  +   CK  R E AE ++    + G +PD V+Y  ++ AY +  + +    
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + ++M E  + P + TYN+LI G  R   L  ++D L+E++E G+ PD  +YN ++H   
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  + A R    M+     P   T N ++NGLC +   D AL++F    + G   +++
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+ +CK G + TA     ++   G  P+A TY  ++       + +    +L  +
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV-SYNTLINLYCKEGK 302
              G     F    +  +      +KE     E   ++  Q + + +Y   +N  C  G+
Sbjct: 691 ADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQ 750

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           L+ A  +LDEM ++G   D  T+  L++GL K
Sbjct: 751 LKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 231/437 (52%), Gaps = 4/437 (0%)

Query: 19   KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
            KA RL++A +++ +  + G  P VVTY+ L+ ++ +    +   ++ + M   G   DV 
Sbjct: 575  KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634

Query: 79   TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            TY+ +I    ++  +  +LD+   M E G+ P + +Y +L+  L +  K D A ++F ++
Sbjct: 635  TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 139  ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                L P T  +NIM+NGL K+   D A ++   ++    +P+L TY  L+ GL K+GRL
Sbjct: 695  QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 199  RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
              A  +  ++ + GH P+ + YT++M    +  K    L I  AM +K    D   Y ++
Sbjct: 755  EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814

Query: 259  IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
            I +  K GR++EA  + E  ++ G   ++  Y++LI+ + K+G ++ A  L +EM+++  
Sbjct: 815  IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874

Query: 319  ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
              +  T+  L+ GL KAG +  A   LE M K+G   +L  YN ++D +GK G +D A +
Sbjct: 875  PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934

Query: 379  VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
             F+ M+    V D  T++S++ +L K  +L  A +L  S  + G          ++D L 
Sbjct: 935  YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994

Query: 435  HSGCRREAKKIQSKIRM 451
             +G   EA  I  ++++
Sbjct: 995  RAGKVHEAAMIFHEMKV 1011



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 204/405 (50%), Gaps = 4/405 (0%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +TYN L+ A+      D    +L  M++    P VVTY +L+ G  +   L  ++ LL E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M + G  P V +Y+SLM   ++  + +E+  +F +M+        +T+++++N LCK+  
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D AL +F  +++ G  P L  Y  L+  L K  ++  A  I  EL +S   P+   Y  
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    ++ +     +++ +MK +    D F Y +++    K GRL+EA +   +M  +G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            + D+V+Y +L+++  K GKL  A ++   M K+    D  T++ LID L K G ++ A 
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
              E     G   N+  Y+ ++D  GK G +D A+ +FE M+ +    +  TY++++  L
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            KA RL  A KLL    K G          ++DG+   G   EA+
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 16/363 (4%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I N+M+  G +P    YN ++    +      ++ +  ++ +  I PD  ++   +H   
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ D A    Q+MI   + P   TF ++++ L K+   D A + F G++     P +V
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ GL KAGRL  A  +  E+ ++  +P+AI Y T++    +  +  +   +   M
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +G   +   Y  +I+   K GR  EA      +   G   D+ +YNTLI++  K G++
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN---IKGARLHLEYMNKIGFDSNLE-A 359
           +    ++ EM ++G EC       +I     AG+   I+GA   +EY + +GF S  E  
Sbjct: 479 DKVLAIIKEMVEKGGEC-------IISRDSNAGHEGTIEGADRTVEYPS-LGFKSLGEIT 530

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN ++     +G +D A+ + E M+    +    TY+++V  L KA RL  A  LL    
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590

Query: 416 KSG 418
           K G
Sbjct: 591 KQG 593



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 205/465 (44%), Gaps = 35/465 (7%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           ++S  LL   + TF   N +  A  I       G  P    YN +++   +   + +   
Sbjct: 214 RISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVI 273

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  ++ +  I PD  T+   +    R+  L  + + + EM++ GI P V ++  L+  L 
Sbjct: 274 VFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALV 333

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  DEA + F  M     +P   T+  ++NGL K    + A  +F  ++++   P+ +
Sbjct: 334 KSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAI 393

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN LI GL KAG    A  + KE+ D G  PN  TY  ++    +  +     ++   +
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ------------------- 284
           K +G   D F Y T+I    K G++ +    +++MV  G +                   
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513

Query: 285 ------------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                       L  ++YNTL++ +   G ++ A  LL+ M+K        T+T L+DGL
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            KAG +  A   L  M K G + ++  Y+ ++    K  + + ++++F+ M     V D 
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADV 633

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            TYS +++ LCK+  +  A  +     + G+  L    K ++  L
Sbjct: 634 STYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 35/326 (10%)

Query: 38   VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
            ++PD   YN++++   +    D    +++ M+   I PD+ TY SL+ G  ++  L  + 
Sbjct: 699  LVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAF 758

Query: 98   DLLDEMLEMGIPPDVWSYNSLMHCLFQLGK-----------------PD----------- 129
            ++  +M E G  PDV +Y SLM  L + GK                 PD           
Sbjct: 759  NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818

Query: 130  -------EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
                   EA   F++ I    TP    ++ +++   K    D AL +F  +Q+    P +
Sbjct: 819  GKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI 878

Query: 183  VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            VTYN L+ GL KAGRL  A  +L+E+   G  P+ +TY  ++    +             
Sbjct: 879  VTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKR 938

Query: 243  MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            MK KG   D   + ++I +  K+ +L EA +  + M  +G    +V+YN LI++  + GK
Sbjct: 939  MKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGK 998

Query: 303  LEAAYLLLDEMEKQGFECDKYTHTIL 328
            +  A ++  EM+ +G   D  T  I+
Sbjct: 999  VHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 35/318 (11%)

Query: 7    TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
            T + NI V    K+NR+++A  ++       +LPD+ TY  L+D   +    +  + +  
Sbjct: 703  TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762

Query: 67   RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +M E G  PDVV Y SL+    +   LS +L +   M +    PDV +Y+SL+  L + G
Sbjct: 763  KMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822

Query: 127  KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH---------- 176
            + +EA   F++ I    TP    ++ +++   K    D AL +F  +Q+           
Sbjct: 823  RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYN 882

Query: 177  -------------------------GFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
                                     G VP+LVTYNILI G+ K G +  A    K + + 
Sbjct: 883  NLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942

Query: 212  GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
            G  P+ IT+T++++   +  K     E+  +M+ +GY      Y  +I    + G++ EA
Sbjct: 943  GIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002

Query: 272  TDYMEQMVTDGVQLDIVS 289
                 +M   G   D ++
Sbjct: 1003 AMIFHEMKVKGCMPDGIT 1020



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 6/318 (1%)

Query: 69  REAGISPDVVTYNSLI---AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++ G S  V TY  +I   AGA     +   + +L  M + G    +    SL+      
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAV---VQILTAMWKEGHRISMHLLTSLLRTFGST 230

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
                A  +F  M      P T  +N +L  L K  +  +A+ +F  L +    P+  T+
Sbjct: 231 NNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTF 290

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I +    ++GRL  A   ++E+  SG  P   T+T ++    ++       +  + MK 
Sbjct: 291 RIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN 350

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
              + +   Y T++    K GRL+EA +   +M  +    D ++YNTLI+   K G+ + 
Sbjct: 351 LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADM 410

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L  EM+ +G   +  T+ I+I  L KAG    A      + + G   ++  YN ++D
Sbjct: 411 ACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470

Query: 366 RLGKDGKIDHAINVFESM 383
            LGK G++D  + + + M
Sbjct: 471 VLGKGGQMDKVLAIIKEM 488



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 84/173 (48%)

Query: 16   TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            +F K   +++A  +  +  R    P++VTYN L+    +    +    +L  M + G  P
Sbjct: 852  SFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVP 911

Query: 76   DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            D+VTYN LI G  +  ++  +      M E GI PDV ++ SL+  L ++ K  EA  +F
Sbjct: 912  DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971

Query: 136  QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
              M      P   T+N++++ L +      A  +F  ++  G +P+ +T  I+
Sbjct: 972  DSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 4/166 (2%)

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           DG    + +Y  +I       + +A   +L  M K+G     +  T L+       N+ G
Sbjct: 176 DGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSG 235

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 396
           A      M   G + +   YN +++ L K G    A+ VF  +       D+ T+   VH
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVH 295

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           +  ++ RL  A++ +   +KSG+         ++D L  SG   EA
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEA 341


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 220/426 (51%), Gaps = 7/426 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG +   R  N  +    ++N+ ++AE+  +    +G+ P++ TYN+LI   C+   FD
Sbjct: 107 IFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFD 166

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +LN M E G SPDV +Y +LI    +N  +S +L L DEM E G+ PDV  YN L+
Sbjct: 167 KAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 226

Query: 120 HCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
              F+ G    A+ +++ ++ G  + P   ++N+M+NGLCK    D +  ++  ++K+  
Sbjct: 227 DGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 286

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             +L TY+ LI GLC +G L  A  + KE+ ++G +P+ + Y T++    R  + +  LE
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+++G       Y  +I    +  ++ EA    E +       D ++Y  L++  C
Sbjct: 347 LWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G L  A  +L+E E    + D + ++ +I+GLC+ G +      L+ M K G   N  
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSC 414
             N +++   +  K++ A+  F +M  K  F    TY+++++ L KA+R   A  L+   
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 415 LKSGVR 420
           L  G +
Sbjct: 526 LHKGWK 531



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 199/422 (47%), Gaps = 43/422 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC 95
           GV PDV  YN+LID + +         I  R+ +   + P++ +YN +I G  +      
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           S ++   M +     D+++Y++L+H L   G  D A RV+++M    ++P    +N MLN
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +    +  L +++ ++K G    +V+YNILI+GL +  ++  A  I + L +     
Sbjct: 334 GYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT------------------ 257
           +++TY  ++    +N      L IL   +      D F Y +                  
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452

Query: 258 -----------------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                            VI  FV+  +L++A  +   MV+ G    +V+YNTLIN   K 
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA 359
            +   AY L+ EM  +G++ +  T+++L++GLC+   +  A  L  + + K GF  +++ 
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKM 571

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +N I+  L   GK++ A+ ++  M+    V +  T+++++    K +    ASK+    L
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631

Query: 416 KS 417
           +S
Sbjct: 632 QS 633



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 154/368 (41%), Gaps = 40/368 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  + +++  I     +     D+ TY+ LI   C   + D    +   M E
Sbjct: 259 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SPDVV YN+++ G  R   +   L+L   M + G    V SYN L+  LF+  K DE
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDE 377

Query: 131 ANRVFQDM------------------IC-------------------GDLTPCTATFNIM 153
           A  +++ +                  +C                   GDL   T  ++ M
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD--TFAYSSM 435

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NGLC+    D    +   + KHG  P     N +I G  +A +L  A      +   G 
Sbjct: 436 INGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGC 495

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P  +TY T++    +  ++     ++  M  KG+  +   Y  ++    +  +L  A +
Sbjct: 496 FPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALN 555

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              Q +  G + D+  +N +I+  C  GK+E A  L  EM+++    +  TH  L++G  
Sbjct: 556 LWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFY 615

Query: 334 KAGNIKGA 341
           K  + + A
Sbjct: 616 KVRDFERA 623



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 117/228 (51%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   CK   L KA +I+ +        D   Y+ +I+  C+    D    +L++M + 
Sbjct: 399 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 458

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P+    N++I G  R S L  +L     M+  G  P V +YN+L++ L +  +  EA
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + ++M+     P   T+++++NGLC+ +  D AL ++    + GF P++  +NI+I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           LC +G++  A  +  E+      PN +T+ T+M+  ++ R ++   +I
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKI 626



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 101/214 (47%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G L T   +  +   C+  RL++   ++    + G  P+    N +I+ + +    +   
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
                M   G  P VVTYN+LI G ++    S +  L+ EML  G  P++ +Y+ LM+ L
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            Q  K D A  ++   +     P     NI+++GLC +   ++AL+++  +++   VP L
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           VT+N L++G  K      A  I   +  S  + N
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV+ YN ++  YC     DA   ++  M    + PD  TYN+LI G       S +L +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L++M   G  PDV +Y  L+    +     +A ++  +M      P   T+N++LNG+C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               ++A+   + L  +G  P  V+YNI++KGL  A R   A  +++E+   G  PN +T
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    R    +  +E+L  M + G T +   Y  ++ AF K  ++ +A +++E MV
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   DIVSYNTL+   C+ G+++ A  LL +++ +G      ++  +IDGL KAG  K
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVKDSFT-YSSMV 395
            A   L+ M   G   ++  Y+ I   L ++ +I+ A+  F   + M ++ +   Y++++
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +   +A  L    + SG    +S    +V+GL + G  +EA+++ +++
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 188/373 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   R   A A++ D  R G LPDVVTY +L++A C+   +     +L+ M +
Sbjct: 170 NTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD 229

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +PD+VTYN ++ G  +   +  +++ L  +   G  P+  SYN ++  LF   + ++
Sbjct: 230 KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWED 289

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M      P   TFN++++ LC+    + A+ +   + ++G  P  ++YN L+ 
Sbjct: 290 AEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH 349

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK  ++  A   ++ +   G  P+ ++Y T++    RN +  + +E+L  +K KG + 
Sbjct: 350 AFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSP 409

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y TVI    K G+ KEA + +++M + G+Q DI++Y+T+ +  C+E ++E A    
Sbjct: 410 VLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTF 469

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +++  G       +  ++ GLCK      A     YM   G   N   Y  +V+ L  +
Sbjct: 470 CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYE 529

Query: 371 GKIDHAINVFESM 383
           G +  A  +F  +
Sbjct: 530 GLVKEARELFAQL 542



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 207/429 (48%), Gaps = 10/429 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +C A +L+ A  ++ D   + V PD  TYN LI   C          +L  M  
Sbjct: 138 NAMVAGYCGAGQLDAARRLVAD---MPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTY  L+    + S    ++ LLDEM + G  PD+ +YN +++ + Q G+ ++
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVED 254

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    +++      P T ++NI+L GL      ++A ++   +   G  P +VT+N+LI 
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G +  A  +L+++   G  PN+++Y  ++    + +K    +E +  M  +G   
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP 374

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T++ A  + G +  A + + Q+   G    ++SYNT+I+   K GK + A  LL
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELL 434

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G + D  T++ +  GLC+   I+ A      +  +G       YN I+  L K 
Sbjct: 435 DEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKR 494

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV---RILK 423
            +  +AI++F  M     + +  TY+ +V  L     +  A +L       GV   +++K
Sbjct: 495 RETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMK 554

Query: 424 SAQKAVVDG 432
                ++DG
Sbjct: 555 KGSIKMLDG 563



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 130/301 (43%), Gaps = 39/301 (12%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY----NILIKGLCKAGRLRTAR 202
           +A+    L  L +    D+ALR+   L   G  P           LIK LC +GR   AR
Sbjct: 67  SASATERLRVLVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADAR 124

Query: 203 WILKELG---------------------------DSGHAPNAITYTTIMK-CCFRNRKYK 234
            +L   G                           D    P+A TY T+++  C R R   
Sbjct: 125 RVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSN 184

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L +L  M R+G   D   Y  ++ A  K    K+A   +++M   G   DIV+YN ++
Sbjct: 185 -ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVL 243

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  C+EG++E A   L  +   G E +  ++ I++ GL  A   + A   +E M   G  
Sbjct: 244 NGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCP 303

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            N+  +N ++  L + G ++ A+ V E M       +S +Y+ ++H  CK K++  A + 
Sbjct: 304 PNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363

Query: 411 L 411
           +
Sbjct: 364 V 364


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 220/426 (51%), Gaps = 7/426 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG +   R  N  +    ++N+ ++AE+  +    +G+ P++ TYN+LI   C+   FD
Sbjct: 107 IFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFD 166

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +LN M E G SPDV +Y +LI    +N  +S +L L DEM E G+ PDV  YN L+
Sbjct: 167 KAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 226

Query: 120 HCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
              F+ G    A+ +++ ++ G  + P   ++N+M+NGLCK    D +  ++  ++K+  
Sbjct: 227 DGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 286

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             +L TY+ LI GLC +G L  A  + KE+ ++G +P+ + Y T++    R  + +  LE
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+++G       Y  +I    +  ++ EA    E +       D ++Y  L++  C
Sbjct: 347 LWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G L  A  +L+E E    + D + ++ +I+GLC+ G +      L+ M K G   N  
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSC 414
             N +++   +  K++ A+  F +M  K  F    TY+++++ L KA+R   A  L+   
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 415 LKSGVR 420
           L  G +
Sbjct: 526 LHKGWK 531



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 200/425 (47%), Gaps = 43/425 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC 95
           GV PDV  YN+LID + +         I  R+ +   + P++ +YN +I G  +      
Sbjct: 214 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 273

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           S ++   M +     D+++Y++L+H L   G  D A RV+++M    ++P    +N MLN
Sbjct: 274 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +    +  L +++ ++K G    +V+YNILI+GL +  ++  A  I + L +     
Sbjct: 334 GYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 392

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT------------------ 257
           +++TY  ++    +N      L IL   +      D F Y +                  
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452

Query: 258 -----------------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                            VI  FV+  +L++A  +   MV+ G    +V+YNTLIN   K 
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA 359
            +   AY L+ EM  +G++ +  T+++L++GLC+   +  A  L  + + K GF  +++ 
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKM 571

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +N I+  L   GK++ A+ ++  M+    V +  T+++++    K +    ASK+    L
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631

Query: 416 KSGVR 420
           + G +
Sbjct: 632 QYGPQ 636



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 141/300 (47%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           VV+YN+LI    +    D   +I   + E     D +TY  L+ G  +N  L+ +L +L+
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E        D ++Y+S+++ L + G+ DE   V   M      P     N ++NG  +  
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             ++ALR F  +   G  P +VTYN LI GL KA R   A  ++KE+   G  PN ITY+
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYS 538

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +M    + +K  + L +      KG+  D   +  +I      G++++A     +M   
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
               ++V++NTL+  + K    E A  + D + + G + D  ++ I + GLC    I  A
Sbjct: 599 KCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA 658



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 117/227 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + N  +  F +A++LE A     + +  G  P VVTYN LI+   +   F   Y 
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++  M   G  P+++TY+ L+ G  +   L  +L+L  + LE G  PDV  +N ++H L 
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             GK ++A +++ +M      P   T N ++ G  K R  + A +++  + ++G  P+++
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           +YNI +KGLC   R+  A   L +  D G  P AIT+  +++    N
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 140/292 (47%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   CK   L KA +I+ +        D   Y+ +I+  C+    D    +L++M + 
Sbjct: 399 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 458

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P+    N++I G  R S L  +L     M+  G  P V +YN+L++ L +  +  EA
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + ++M+     P   T+++++NGLC+ +  D AL ++    + GF P++  +NI+I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LC +G++  A  +  E+      PN +T+ T+M+  ++ R ++   +I   + + G   D
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPD 638

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              Y   +       R+ +A  ++   V  GV    +++N L+      G L
Sbjct: 639 IISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 93/188 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    KA R  +A A++ + +  G  P+++TY++L++  CQ    D    +  +  E
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDV  +N +I G   +  +  +L L  EM +    P++ ++N+LM   +++   + 
Sbjct: 563 KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A++++  ++     P   ++NI L GLC      +A+         G +P  +T+NIL++
Sbjct: 623 ASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVR 682

Query: 191 GLCKAGRL 198
            +   G L
Sbjct: 683 AVLDNGAL 690



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 63/123 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K   ++ NI +   C + ++E A  +  +  +   +P++VT+N L++ + +   F+    
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I + + + G  PD+++YN  + G      +S ++  L++ ++ G+ P   ++N L+  + 
Sbjct: 626 IWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVL 685

Query: 124 QLG 126
             G
Sbjct: 686 DNG 688



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 34/78 (43%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K    E+A  I    ++ G  PD+++YN+ +   C           LN   + G+ P 
Sbjct: 614 FYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPT 673

Query: 77  VVTYNSLIAGATRNSLLS 94
            +T+N L+     N  L+
Sbjct: 674 AITWNILVRAVLDNGALT 691


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 221/443 (49%), Gaps = 8/443 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C+A  + +A  + +   R G  P+V  +  LI   C+         + + M +
Sbjct: 257 TILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V+TYN++I G ++   ++ +L + + M + G  PD W+YN+L++ L    K +E
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEE 375

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  + +    TP   TF  ++NG C     D+ALRM   +       +L  +  LI 
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K  RL+ A+ +L E+  +G  PN ITYT+I+    ++ K  + LE+L  M+R G   
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 495

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y +++   VK  +L +A   + +M  DG+  ++++Y TL+   C E   + A+ L 
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + ME+ G + D++ + +L D LCKAG  + A     ++ + G       Y  ++D   K 
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A  + E M       DS+TYS ++H LCK KRL  A  +L      G++    A 
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
             ++D +   G    AK++ +++
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEM 695



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 199/432 (46%), Gaps = 33/432 (7%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           +FGKL   L+        K +RL++A+ ++ +    G++P+V+TY  +ID YC+    D 
Sbjct: 429 VFGKLINSLI--------KKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L  M   G  P+  TYNSL+ G  ++  L  ++ LL +M + GI P+V +Y +L+ 
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                   D A R+F+ M    L P    + ++ + LCK    + A   +  + + G   
Sbjct: 541 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVAL 597

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             V Y  LI G  KAG    A  +++ + D G  P++ TY+ ++    + ++    L IL
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G     F Y  +I   ++ G+   A     +M + G +    +Y   IN YCKE
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+LE A  L+ +ME++G   D  T+ ILIDG    G I  A   L+ M     + N   Y
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 777

Query: 361 NCIVDRLGKDG----------------KIDHAINVFESMEVKDSF-----TYSSMVHNLC 399
             ++  L K                  ++D    + E M VK        TYSS++   C
Sbjct: 778 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM-VKHGLNPTVTTYSSLIAGFC 836

Query: 400 KAKRLPSASKLL 411
           KA RL  A  LL
Sbjct: 837 KAGRLEEACLLL 848



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 216/473 (45%), Gaps = 45/473 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS +  N  + +  + +  E    +    ++ G+LPD VTYN +I +YC+       +  
Sbjct: 146 LSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRC 205

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              + E G+ P+  T N+L+ G  R   L  +  L   M  MG   + +SY  L+  L +
Sbjct: 206 FRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCE 265

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                EA  +F  M     +P    F  +++GLCK+    +A  +F  + ++G VP ++T
Sbjct: 266 AKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 325

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGLEILSAM 243
           YN +I G  K GR+  A  I + +  +G  P+  TY T I   C  ++K +   E+L+  
Sbjct: 326 YNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC--DQKTEEAEELLNNA 383

Query: 244 KRKGY-----TFDGF--GYC----------------------------TVIAAFVKIGRL 268
            ++G+     TF     GYC                             +I + +K  RL
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           KEA + + ++  +G+  ++++Y ++I+ YCK GK++ A  +L  ME+ G + + +T+  L
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           + GL K   +  A   L  M K G   N+  Y  ++     +   D+A  +FE ME    
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             D   Y+ +   LCKA R   A   +   ++ GV + K     ++DG   +G
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAG 613



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 178/384 (46%), Gaps = 19/384 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R E+A + I+   R GV    V Y  LID + +  + D   T++ RM + G +PD
Sbjct: 577 LCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY+ L+    +   L+ +L +LD+M   GI   +++Y  L+  + + GK D A R++ 
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+ + +N  CK    ++A  +   +++ G  P++VTYNILI G    G
Sbjct: 694 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR----------------KYKLGLEIL 240
            +  A   LK +  +   PN  TY  ++K   +                  +  +  ++L
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + G       Y ++IA F K GRL+EA   ++ M   G+  +   Y  LI   C  
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
              E A   +  M + GF+    ++ +L+ GLC  G+ +  +     + ++G++ +  A+
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             + D L K G +D    +   ME
Sbjct: 934 KILNDGLLKAGYVDICFQMLSIME 957



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 174/403 (43%), Gaps = 41/403 (10%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           VS DA   I  R   A ++     YN  +    R  +      +  ++++ G+ PD  +Y
Sbjct: 128 VSADAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N+++    + G    A+R F+ ++ G L P T T N ++ G C+      A  +F  +  
Sbjct: 187 NTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G      +Y ILI+GLC+A  +R A  +   +   G +PN   +T ++    ++ +   
Sbjct: 247 MGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +  AM + G       Y  +I  + K+GR+ +A    E M  +G   D  +YNTLI 
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------RL 343
             C + K E A  LL+   K+GF     T T LI+G C A     A            +L
Sbjct: 367 GLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425

Query: 344 HLEYMNKI-----------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
            L+   K+                       G   N+  Y  I+D   K GK+D A+ V 
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 381 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + ME      +++TY+S+++ L K K+L  A  LL    K G+
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 51/116 (43%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCKA RLE+A  ++      G+ P+   Y +LI   C    F+   + ++ M E G 
Sbjct: 832 IAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGF 891

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            P + +Y  L+ G            L  ++LE+G   D  ++  L   L + G  D
Sbjct: 892 QPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 947


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 223/436 (51%), Gaps = 4/436 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A A++   ++LG  PD+VT + L++ YC          ++++M E
Sbjct: 120 SILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VT+N+LI G   ++  S ++ L+D M+  G  PD+++Y ++++ L + G  D 
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M  G +      +N +++GLCK ++ D+A  +F  ++  G  P++ TYN LI 
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T+ +++    +  K     ++   M ++    
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I  F    RL EA      MV+     D+V+YNTLI  +CK  ++E    L 
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+  LI GL +AG+   A+   + M   G   ++  Y+ ++D L K 
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 479

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++      + +TY+ M+  +CKA ++     L  S    GV+      
Sbjct: 480 GKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 539

Query: 427 KAVVDGLRHSGCRREA 442
             ++ G    G + EA
Sbjct: 540 TTMISGFCRKGLKEEA 555



 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 198/382 (51%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A+I   +  G  PD+ TY  +++  C+    D   ++L +M +  I  +VV Y
Sbjct: 200 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIY 259

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N++I G  +   +  + DL ++M   GI PDV++YNSL+ CL   G+  +A+R+  DMI 
Sbjct: 260 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TFN +++   K      A ++F  + +    P +VTYN LI G C   RL  
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ I   +      P+ +TY T++K   + ++ + G+E+   M ++G   +   Y T+I 
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              + G    A    ++MV+DGV  DI++Y+ L++  CK GKLE A ++ + ++K   E 
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           + YT+ I+I+G+CKAG ++        ++  G   N+  Y  ++    + G  + A  +F
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559

Query: 381 ESMEVKDSFTYSSMVHNLCKAK 402
             M+   +   S   + L +A+
Sbjct: 560 REMKEDGTLPDSGCYNTLIRAR 581



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 4/376 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+  +  TY++L++ +C+         +L +M + G  PD+VT +SL+ G      +S 
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 169

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L+D+M+EMG  PD  ++N+L+H LF   K  EA  +   M+     P   T+  ++N
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK    D AL + + ++K      +V YN +I GLCK   +  A  +  ++   G  P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY +++ C     ++     +LS M  +    +   + ++I AF K G+L EA    
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+   +  +IV+YN+LIN +C   +L+ A  +   M  +    D  T+  LI G CKA
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
             ++        M++ G   N   YN ++  L + G  D A  +F+ M       D  TY
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469

Query: 392 SSMVHNLCKAKRLPSA 407
           S ++  LCK  +L  A
Sbjct: 470 SILLDGLCKYGKLEKA 485



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 197/401 (49%), Gaps = 5/401 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++ A +++    +  +  +VV YN +ID  C++   D  + + N+M   GI PD
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 290

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYNSLI+        S +  LL +M+E  I P+V ++NSL+    + GK  EA ++F 
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   + P   T+N ++NG C +   D A ++F  +     +P++VTYN LIKG CKA 
Sbjct: 351 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAK 410

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+     +  +I   M   G   D   Y 
Sbjct: 411 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 470

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G+L++A    E +    ++ +I +YN +I   CK GK+E  + L   +  +
Sbjct: 471 ILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +   +T +I G C+ G  + A      M + G   +   YN ++    +DG    +
Sbjct: 531 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 590

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             + + M     V D+ T  SMV N+    RL  +   +LS
Sbjct: 591 AELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSYLEMLS 630



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 37/367 (10%)

Query: 3   GKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           GK+   ++  N  +   CK   ++ A  +       G+ PDV TYN LI   C +  +  
Sbjct: 250 GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSD 309

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L+ M E  I+P+VVT+NSLI    +   L  +  L DEM++  I P++ +YNSL++
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV- 179
                 + DEA ++F  M+  D  P   T+N ++ G CK +  +  + +FR + + G V 
Sbjct: 370 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429

Query: 180 ----------------------------------PELVTYNILIKGLCKAGRLRTARWIL 205
                                             P+++TY+IL+ GLCK G+L  A  + 
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           + L  S   PN  TY  +++   +  K + G ++  ++  KG   +   Y T+I+ F + 
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G  +EA     +M  DG   D   YNTLI    ++G   A+  L+ EM   GF  D  T 
Sbjct: 550 GLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 609

Query: 326 TILIDGL 332
           +++I+ L
Sbjct: 610 SMVINML 616



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 200/416 (48%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L+ A A+  + ++    P ++ ++ L+ A  +   FD   ++  +M+  GI  +  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            L+    R S L  +L +L +M+++G  PD+ + +SL++      +  EA  +   M+  
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P T TFN +++GL  +     A+ +   +   G  P+L TY  ++ GLCK G +  A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +LK++       N + Y TI+    + +      ++ + M+ KG   D F Y ++I+ 
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V++N+LI+ + KEGKL  A  L DEM ++  + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+  LI+G C    +  A+     M       ++  YN ++    K  +++  + +F 
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            M     V ++ TY++++  L +A     A K+    +  GV         ++DGL
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 4/398 (1%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +  D    +   M ++   P ++ ++ L++   + +     + L ++M  +GIP + ++Y
Sbjct: 60  LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           + L++C  +  +   A  V   M+     P   T + +LNG C  +    A+ +   + +
Sbjct: 120 SILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE 179

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G+ P+ VT+N LI GL    +   A  ++  +   G  P+  TY T++    +     L
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            L +L  M++     +   Y T+I    K   + +A D   +M T G++ D+ +YN+LI+
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             C  G+   A  LL +M ++    +  T   LID   K G +  A    + M +   D 
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 411
           N+  YN +++      ++D A  +F  M  KD      TY++++   CKAKR+    +L 
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               + G+         ++ GL  +G    A+KI  K+
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 115/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+E+   +  +  + G++ + VTYN LI    Q    D    I  +M  
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G  +   L  +L + + + +  + P++++YN ++  + + GK ++
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P    +  M++G C+    + A  +FR +++ G +P+   YN LI+
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G   +A T + ++      R  K  LE+LS
Sbjct: 580 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 630



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 4/263 (1%)

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +  E+  S   P+ I ++ ++    +  K+ + + +   M+  G   + + Y 
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F +  +L  A   + +M+  G + DIV+ ++L+N YC   ++  A  L+D+M + 
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G++ D  T   LI GL        A   ++ M   G   +L  Y  +V+ L K G ID A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++ + ME      +   Y++++  LCK K +  A  L       G++       +++  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 433 LRHSGCRREAKKIQSKIRMAKIS 455
           L + G   +A ++ S +   KI+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKIN 323


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 213/431 (49%), Gaps = 2/431 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  + K  +++ A  I+ D    G +PD  TY  LI   CQ    D    +      
Sbjct: 297 NTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALG 356

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P +V YN+LI G ++  L+  +L L+++M + G+ PD+W+YN +++ L ++G   +
Sbjct: 357 KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSD 416

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +    I     P   TFN +++G CK    DNA+ +   +  HG  P+++TYN ++ 
Sbjct: 417 ANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN 476

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA +        K + + G  PN ITY  +++   + RK    L++L  ++ +G   
Sbjct: 477 GLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIP 536

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           D   + TVI+ F   G L EA     +M     +   + +YN +IN + ++  ++ A  L
Sbjct: 537 DPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKL 596

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM  +G + D YT+ ++IDG CK GN+      L    +IGF  +L  +  +++ L  
Sbjct: 597 FHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCV 656

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             ++  A+ +   M V+      ++V      K+  +A K+++  L     I   A + +
Sbjct: 657 QHRVHEAVGIVHLM-VRTGVVPEAVVTIFDADKKAVAAPKIIVEDLLKKSHITYYAYELL 715

Query: 430 VDGLRHSGCRR 440
            DG+R+   ++
Sbjct: 716 YDGIRNKKLQK 726



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 188/375 (50%), Gaps = 11/375 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + +YN +++   ++  F+  + +  RM+  GI+PDV T+   I    R      +L L
Sbjct: 109 PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRL 168

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M   G   +   Y +++   ++     EA  +F  M+   + P  ATFN +++ LCK
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCK 228

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR-------TARWILKELGDSG 212
             +     ++   + K+G  P L T+NI I+GLC+ G L         A   L ++ + G
Sbjct: 229 KGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+  TY TI+    +  K +    IL   K KG+  D F YC++I    + G +  A 
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              E+ +  G++  IV YNTLI    ++G +  A  L+++M K+G   D +T+ ++I+GL
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
           CK G +  A   L      G+  ++  +N ++D   K  K+D+AI + +SM       D 
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDV 468

Query: 389 FTYSSMVHNLCKAKR 403
            TY+S+++ LCKA +
Sbjct: 469 ITYNSILNGLCKAAK 483



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 206/432 (47%), Gaps = 12/432 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  F + N   +A  +    +RLG+ P + T+N L+   C+      G  +LN++ + G+
Sbjct: 188 ISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGV 247

Query: 74  SPDVVTYNSLIAGATR-------NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            P++ T+N  I G  R       NS +  + + L +M+  G+ PD ++YN++++   ++G
Sbjct: 248 CPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVG 307

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +A+R+ +D       P   T+  ++ G+C++   D+AL +F      G  P +V YN
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LIKGL + G +  A  ++ ++   G +P+  TY  ++    +         +L+A   K
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  D F + T+I  + K  ++  A   ++ M + GV  D+++YN+++N  CK  K E  
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
                 + ++G   +  T+ ILI+ LCKA  +  A   LE +   G   +  ++  ++  
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547

Query: 367 LGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              +G +D A  +F  ME +        TY+ M++   +   +  A KL       G   
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607

Query: 422 LKSAQKAVVDGL 433
                + ++DG 
Sbjct: 608 DSYTYRVMIDGF 619



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 195/420 (46%), Gaps = 11/420 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV T+ + I ++C+     A   +LN M   G   + V Y ++I+G    +    +
Sbjct: 141 GIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEA 200

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L ++ML +GI P + ++N LMH L + G   E  ++   ++   + P   TFNI + G
Sbjct: 201 YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQG 260

Query: 157 LCK-------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           LC+       N     A      +   G  P+  TYN +I G  K G+++ A  ILK+  
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAK 320

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G  P+  TY +++    ++      L +      KG       Y T+I    + G + 
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A   M  M  +G+  DI +YN +IN  CK G +  A  LL+    +G+  D +T   LI
Sbjct: 381 KALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI 440

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CK   +  A   L+ M   G   ++  YN I++ L K  K +  +  F+ +  K   
Sbjct: 441 DGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL 500

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +  TY+ ++ +LCKA+++  A  LL      G+     +   V+ G  ++G   EA ++
Sbjct: 501 PNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQL 560



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 160/348 (45%), Gaps = 13/348 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  L N  +    +   + KA  ++ D  + G+ PD+ TYN++I+  C+         
Sbjct: 360 KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN 419

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +LN     G  PD+ T+N+LI G  +   +  ++ +LD M   G+ PDV +YNS+++ L 
Sbjct: 420 LLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLC 479

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  KP++    F+ ++     P   T+NI++  LCK R    AL +   ++  G +P+ V
Sbjct: 480 KAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPV 539

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILSA 242
           ++  +I G C  G L  A  + + +       + +    IM   F  +    +  ++   
Sbjct: 540 SFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHE 599

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  KG   D + Y  +I  F K+G +    D++ + +  G    + ++  +IN  C + +
Sbjct: 600 MGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHR 659

Query: 303 LEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLCKAGNI 338
           +  A  ++  M + G         F+ DK       I+++ L K  +I
Sbjct: 660 VHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAPKIIVEDLLKKSHI 707



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 162/363 (44%), Gaps = 12/363 (3%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYT 163
           E G      +Y  ++  L   G+ D   RV  +M +  D +     +   +    +    
Sbjct: 33  EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKV 92

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A+ +F  +  +   P + +YN ++  L + G    A  +   +   G AP+  T+T  
Sbjct: 93  QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIR 152

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +K   R ++    L +L+ M  +G   +   YCTVI+ F +     EA +   +M+  G+
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              I ++N L+++ CK+G L+    LL+++ K G   + +T  I I GLC+ G ++GA  
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANS 272

Query: 344 HL----EYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +     Y++K+   G + +   YN I+    K GKI  A  + +  + K    D FTY 
Sbjct: 273 KVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYC 332

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           S++  +C+   +  A  L    L  G++        ++ GL   G   +A ++ + +   
Sbjct: 333 SLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE 392

Query: 453 KIS 455
            +S
Sbjct: 393 GMS 395


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 209/418 (50%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV TY+ LI+AYC+   FD    +L  MRE G   + VTYN LIAG  R+  +  +
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                +M + G+ PD ++Y +L++ L +  + +EA  +  +M C +L P    +  +++G
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             +    D A +M + +   G  P  +TY+ L++GLCK G++  A  +LK++    H P+
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY  I++  FR+   K    +LS M+  G + + + Y  +I    + G  ++A+D +E
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M T G++ +   Y  LI+ YC+EG +  A  + D+M K     D Y +  LI GL K G
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            ++ +  +   M + G   N   Y+ ++    K+G ++ A  + + M       +   Y 
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++ +  K+  +   S    S L  GV +       ++  L  SG    A ++ S+I 
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 206/407 (50%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +    ++A  +I + +  GV P+ +TY+ L+   C+    D    +L +M      PD
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN +I G  R+     +  LL EM   GI P+V++Y+ ++H L Q G+P++A+ + +
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P    +  +++G C+      A  +F  + K   +P+L  YN LI GL K G
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  +     ++ + G  PN  TY+ ++    +N   +   +++  M   G   +   Y 
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++ ++ K   +++ +   + M+  GV LD   Y  LI+     G +EAA+ +L E+EK 
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D + ++ LI GLCK  + + A   L+ M+K G D N+  YN ++D L K G I +A
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NVF S+  K    +  TY+S++   CK   + +A  L    L +G+
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 638



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 215/449 (47%), Gaps = 4/449 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N+ +   C++  +E+A     D    G++PD  TY  LI+  C+    +    +
Sbjct: 150 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 209

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M  A + P+VV Y +LI G  R      +  ++ EM+  G+ P+  +Y++L+  L +
Sbjct: 210 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G+ D A+ + + M+     P T T+N+++ G  ++    +A R+   ++  G  P + T
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLC++G    A  +L+E+   G  PNA  Y  ++    R     L  EI   M 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +     D + Y ++I    K+GR++E+T Y  QM   G+  +  +Y+ LI+ Y K G LE
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +A  L+  M   G + +   +  L++   K+ +I+      + M   G   +   Y  ++
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L   G ++ A  V   +E    V D   YSS++  LCK      A  +L    K GV 
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 569

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                  A++DGL  SG    A+ + + I
Sbjct: 570 PNIVCYNALIDGLCKSGDISYARNVFNSI 598



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 185/398 (46%), Gaps = 5/398 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   C++   EKA  ++ +    G+ P+   Y  LI  YC+  +      I ++M +
Sbjct: 331 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+  YNSLI G ++   +  S     +M E G+ P+ ++Y+ L+H   + G  + 
Sbjct: 391 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 450

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ Q M+   L P    +  +L    K+   +     F+ +   G + +   Y ILI 
Sbjct: 451 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 510

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L  +G +  A  +L E+  +G  P+   Y++++    +    +    IL  M +KG   
Sbjct: 511 NLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 570

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K G +  A +    ++  G+  + V+Y +LI+  CK G +  A+ L 
Sbjct: 571 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 630

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM   G   D + +++L  G   AG+++ A   +E M   G  S + ++N +VD   K 
Sbjct: 631 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS-ISSFNNLVDGFCKR 689

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           GK+   + +   +     V ++ T  +++  L +A +L
Sbjct: 690 GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 175/396 (44%), Gaps = 5/396 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +C+   +  A  I     ++ VLPD+  YN LI    +    +       +M+E G+
Sbjct: 369 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 428

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+  TY+ LI G  +N  L  +  L+  ML+ G+ P+   Y  L+   F+    ++ + 
Sbjct: 429 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 488

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M+   +      + I+++ L  +   + A R+   ++K+G VP++  Y+ LI GLC
Sbjct: 489 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLC 548

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K      A  IL E+   G  PN + Y  ++    ++        + +++  KG   +  
Sbjct: 549 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 608

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y ++I    K+G +  A     +M+  G+  D   Y+ L       G LE A  L++EM
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G      +   L+DG CK G ++     L  +   G   N      I+  L + GK+
Sbjct: 669 FLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727

Query: 374 DHAINVFESMEVKDSFT----YSSMVHNLCKAKRLP 405
                +F  ++ K S +    +SS+  ++    ++P
Sbjct: 728 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 763



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 179/427 (41%), Gaps = 54/427 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  R+E++          G+LP+  TY+ LI  Y +    ++   ++ RM +
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ V Y  L+    ++  +         ML+ G+  D   Y  L+H L   G  + 
Sbjct: 461 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 520

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV  ++      P    ++ +++GLCK    + A  +   + K G  P +V YN LI 
Sbjct: 521 AFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 580

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+G +  AR +   +   G  PN +TYT+++    +         + + M   G T 
Sbjct: 581 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 640

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  +       G L++A   +E+M   G    I S+N L++ +CK GK++    LL
Sbjct: 641 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLL 699

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIK----------------GAR----LHLEYMN- 349
             +  +G   +  T   +I GL +AG +                  AR    L ++ +N 
Sbjct: 700 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759

Query: 350 -KIGFD------------SNLE-------------------AYNCIVDRLGKDGKIDHAI 377
            KI  D             NL+                   +Y  IVD L + GK+  A+
Sbjct: 760 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 819

Query: 378 NVFESME 384
           N+ + M+
Sbjct: 820 NLLKEMD 826



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 159/348 (45%), Gaps = 18/348 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R+  I +     +  +E A  ++ +  + G +PDV  Y+ LI   C+    +  + I
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 559

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M + G+ P++V YN+LI G  ++  +S + ++ + +L  G+ P+  +Y SL+    +
Sbjct: 560 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G    A  ++ +M+   +TP    ++++  G       + A+ +   +   G    + +
Sbjct: 620 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISS 678

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N L+ G CK G+++    +L  +   G  PNA+T   I+       K      I   ++
Sbjct: 679 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 738

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +K        + ++    +  G+               + LD+V  + +I  +CKEG L+
Sbjct: 739 QKTSESAARHFSSLFMDMINQGK---------------IPLDVV--DDMIRDHCKEGNLD 781

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
            A +L D +  +       ++  ++D LC+ G +  A   L+ M+K G
Sbjct: 782 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 6/275 (2%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++L+    K+GR++ A  ++  + D G AP+      ++K   R     L  ++   M  
Sbjct: 51  DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + D + Y T+I A+ K+     A   + +M   G  L+ V+YN LI   C+ G +E 
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+    +ME  G   D +T+  LI+GLCK+     A+  L+ M+      N+  Y  ++D
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 230

Query: 366 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              ++G  D A  + + M       +  TY ++V  LCK  ++  AS LL   ++   R 
Sbjct: 231 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 290

Query: 422 LKSAQKAVVDG-LRHSGCRREAKKIQSKIRMAKIS 455
                  +++G  RH   +++A ++ S++  A IS
Sbjct: 291 DTITYNLIIEGHFRHHN-KKDAFRLLSEMENAGIS 324



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 41/313 (13%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           A  +++++   K+    +A  +   ++  G  P +   N L+K L +A  +    W ++E
Sbjct: 48  AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAM-ALLWKVRE 106

Query: 208 -LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +  +G +P+  TY+T+++   + R++    ++L  M+ +G   +   Y  +IA   + G
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK--------------------------- 299
            ++EA  + + M   G+  D  +Y  LIN  CK                           
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226

Query: 300 --------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
                   EG  + A+ ++ EM   G + +K T+  L+ GLCK G +  A L L+ M + 
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 286

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
               +   YN I++   +      A  +   ME      + +TYS M+H LC++     A
Sbjct: 287 SHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 346

Query: 408 SKLLLSCLKSGVR 420
           S LL      G++
Sbjct: 347 SDLLEEMTTKGLK 359



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 57/291 (19%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK+  +  A  +    +  G++P+ VTY  LID  C+       + + N M  
Sbjct: 576 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+PD   Y+ L  G +    L  ++ L++EM   G    + S+N+L+    + GK  E
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 694

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC---------------KNRYTDNALRMFRGL-- 173
             ++   ++   L P   T   +++GL                + + +++A R F  L  
Sbjct: 695 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 754

Query: 174 --QKHGFVPELV----------------------------------TYNILIKGLCKAGR 197
                G +P  V                                  +Y  ++  LC+ G+
Sbjct: 755 DMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK 814

Query: 198 LRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L  A  +LKE+   G+  P  +    I    FR   + L   +     R G
Sbjct: 815 LSEALNLLKEMDKRGNLQPTLVALLGIF--WFRRHHHILNKSVTKMATRFG 863


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 221/468 (47%), Gaps = 39/468 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  +++AE ++   I  GV PDVVTYN +ID  C+  + D    +L  M + G+ PD
Sbjct: 244 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 303

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN++I G  +   +  +  +L  M++  + PD+ +YN L+H     G+  E  R  +
Sbjct: 304 VVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P   T++++L+ LCKN     A ++F  + + G  P +  Y IL+ G    G
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +     +L  +  +G +PN   +  ++    +       + I S M + G + D   Y 
Sbjct: 424 AIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYG 483

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTD----------------------------------- 281
            +I A  K+GR+ +A     QM+ D                                   
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ 543

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV+ ++V +NT++   C EG++  A  L+D ME+ G   +  ++  LI G C AG    A
Sbjct: 544 GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEA 603

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              L+ M  +G   +L +Y+ ++    K G+ID+A  +F  M  K     + TYS+++  
Sbjct: 604 AQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           L   +R   A +L L+ +KSG +        +++GL  + C  EA KI
Sbjct: 664 LFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKI 711



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 228/548 (41%), Gaps = 109/548 (19%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  +++AE ++   I  GV PDVVTYN +ID  C+  + D    +L  M +
Sbjct: 273 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+ TYN LI G          +  L+EM   G+ PDV +Y+ L+  L + GK  E
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE 392

Query: 131 ANRVFQDMICGDLTPCTATFNIML---------------------NGLCKNRYT------ 163
           A ++F  MI   + P    + I+L                     NG+  N Y       
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452

Query: 164 --------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-------------- 201
                   D A+ +F  + +HG  P++VTY ILI  LCK GR+  A              
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 202 ----------------RW-----ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
                           RW     +  E+ D G  PN + + TIM       +  +   ++
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
            +M+R G   +   Y T+I      GR  EA   ++ MV+ G++ D++SY+TL+  YCK 
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKT 632

Query: 301 GKLEAAYLLLDEMEKQGF-----------------------------------ECDKYTH 325
           G+++ AY L  EM ++G                                    + D YT+
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY 692

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
            I+++GLCK   +  A    + +       N+  +  ++D L K G+   A+++F S+  
Sbjct: 693 NIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPS 752

Query: 385 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
              V +  TY  M+ N+ +   L     L L+  KSG         A++  L   G    
Sbjct: 753 HGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMR 812

Query: 442 AKKIQSKI 449
           A    SKI
Sbjct: 813 AGAYLSKI 820



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 11/413 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLG---VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            C   R+E+A  ++      G     P+VVTYN +ID  C+  + D    +L  M + G+
Sbjct: 171 LCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 230

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             DVVTY+++I G  +   +  +  +L  M++ G+ PDV +YN+++  L +    D A  
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V Q MI   + P   T+N +++GLCK +  D A  + + +      P++ TYN LI G  
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G  +     L+E+   G  P+ +TY+ ++    +N K     +I   M RKG   +  
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  +   G + + TD ++ MV +G+  +   +N ++  Y K+  ++ A  +   M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN------CIVDRL 367
            + G   D  T+ ILID LCK G +  A L    M   G   N   +N      C VDR 
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530

Query: 368 GKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            K  ++     +++     +   +++++ NLC   ++  A +L+ S  + GVR
Sbjct: 531 EKAEEL--FFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVR 581



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 186/399 (46%), Gaps = 8/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGISP 75
           FC+  R+E   A     ++ G   + V  N L++  C     D    IL  RM E G  P
Sbjct: 100 FCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMP 159

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDVWSYNSLMHCLFQLGKPDEAN 132
           +VV+ N+L+ G      +  +L+LL  M E G     P+V +YN+++  L +    D A 
Sbjct: 160 NVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAE 219

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V Q MI   +     T++ +++GLCK +  D A  + + +   G  P++VTYN +I GL
Sbjct: 220 GVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 279

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CKA  +  A  +L+ + D G  P+ +TY TI+    + +       +L  M  K    D 
Sbjct: 280 CKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDI 339

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I  ++  G  KE    +E+M   G+  D+V+Y+ L++  CK GK   A  +   
Sbjct: 340 QTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYC 399

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M ++G + +   + IL+ G    G I      L+ M   G   N   +N ++    K   
Sbjct: 400 MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM 459

Query: 373 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           ID A+++F  M       D  TY  ++  LCK  R+  A
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 178/368 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +C + K   +++A  I     + G+ PDVVTY +LIDA C+    D      N+M
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++P+ V +NSL+ G         + +L  EM + G+ P+V  +N++M  L   G+ 
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A R+   M    + P   ++N ++ G C    TD A ++   +   G  P+L++Y+ L
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           ++G CK GR+  A  + +E+   G  P A+TY+TI++  F  R++    E+   M + G 
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            +D + Y  ++    K   + EA    + + +  ++ +I+++  +I++  K G+ + A  
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   +  T+ I++  + + G +         M K G   +    N I+  L 
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805

Query: 369 KDGKIDHA 376
             G+I  A
Sbjct: 806 GRGEIMRA 813



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 156/321 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V   C  +R EKAE +  +    GV P+VV +N ++   C          +++ M
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ P+V++YN+LI G         +  LLD M+ +G+ PD+ SY++L+    + G+ 
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  +F++M+   +TP   T++ +L GL   R    A  ++  + K G   ++ TYNI+
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + GLCK   +  A  I + L      PN IT+T ++   F+  + K  +++ +++   G 
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   YC ++   ++ G L E  +    M   G   D V  N +I      G++  A  
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815

Query: 309 LLDEMEKQGFECDKYTHTILI 329
            L ++++  F  +  T ++LI
Sbjct: 816 YLSKIDEMNFSLEASTTSLLI 836



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 12/176 (6%)

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           M +  ++ V+ D+ +Y+ L   +C+ G++E  +     + K G+  ++     L++GLC 
Sbjct: 78  MARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCD 137

Query: 335 AGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-------VK 386
           A  +  A  + L  M + G   N+ + N ++  L  + +++ A+ +  +M          
Sbjct: 138 AKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTP 197

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           +  TY++++  LCKA+ +  A  +L   +  GV++       ++DGL    C+ +A
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGL----CKAQA 249


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 223/444 (50%), Gaps = 9/444 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +      N  + A  +  D +   + P + T+ +++ A+C     D+  ++L  M +
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTK 245

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ V Y +LI   ++ + ++ +L LL+EM  MG  PD  ++N ++  L +  + +E
Sbjct: 246 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M+     P   T+  ++NGLCK    D A  +F  + K    PE+V +N LI 
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIH 361

Query: 191 GLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           G    GRL  A+ +L ++  S G  P+  TY +++   ++     L LE+L  M+ KG  
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + + Y  ++  F K+G++ EA + + +M  DG++ + V +N LI+ +CKE ++  A  +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM ++G + D YT   LI GLC+   IK A   L  M   G  +N   YN +++   +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I  A  +   M  +    D  TY+S++  LC+A  +  A  L    L+ G      +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              +++GL  SG   EA + Q ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEM 625



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 195/393 (49%), Gaps = 9/393 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISP 75
            CK  R++ A+ +     +    P++V +N LI  +      D    +L+ M  + GI P
Sbjct: 332 LCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV TYNSLI G  +  L+  +L++L +M   G  P+V+SY  L+    +LGK DEA  V 
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M    L P T  FN +++  CK      A+ +FR + + G  P++ T+N LI GLC+ 
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             ++ A W+L+++   G   N +TY T++    R  + K   ++++ M  +G   D   Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I    + G + +A    E+M+ DG     +S N LIN  C+ G +E A     EM  
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI-D 374
           +G   D  T   LI+GLC+AG I+        +   G   +   +N ++  L K G + D
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687

Query: 375 HAINVFESME---VKDSFTYSSMVHNLCKAKRL 404
             + + E +E   V +  T+S ++ ++   + L
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 182/381 (47%), Gaps = 9/381 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P   +YN ++      +    + ++  +ML   IPP ++++  +M     + + D A  
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + +DM      P +  +  +++ L K    + AL++   +   G VP+  T+N +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  R+  A  ++  +   G AP+ ITY  +M    +  +     ++   + +        
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI--- 355

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
            + T+I  FV  GRL +A   +  MVT  G+  D+ +YN+LI  Y KEG +  A  +L +
Sbjct: 356 -FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M  +G + + Y++TIL+DG CK G I  A   L  M+  G   N   +NC++    K+ +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           I  A+ +F  M  K    D +T++S++  LC+   +  A  LL   +  GV         
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 429 VVDGLRHSGCRREAKKIQSKI 449
           +++     G  +EA+K+ +++
Sbjct: 535 LINAFLRRGEIKEARKLVNEM 555



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 118/221 (53%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +T   N  +  FCK +R+ +A  I  +  R G  PDV T+N LI   C+         
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+  + VTYN+LI    R   +  +  L++EM+  G P D  +YNSL+  L 
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ D+A  +F+ M+     P   + NI++NGLC++   + A+   + +   G  P++V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           T+N LI GLC+AGR+     + ++L   G  P+ +T+ T+M
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 101/198 (51%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +  F +   +++A  ++ + +  G   D +TYN LI   C+    D   ++ 
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M   G +P  ++ N LI G  R+ ++  +++   EM+  G  PD+ ++NSL++ L + 
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ ++   +F+ +    + P T TFN +++ LCK  +  +A  +     + GFVP   T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707

Query: 186 NILIKGLCKAGRLRTARW 203
           +IL++ +     L   R+
Sbjct: 708 SILLQSIIPQETLDRRRF 725



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 15/284 (5%)

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFR 229
            ++G+      Y +LI  L   G  +T   +L ++ D G       + +IM    K  F 
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            +  +L LE+ +    +  TF    Y  V+   V     K A +    M++  +   + +
Sbjct: 163 GQTTRLMLEMRNVYSCEP-TFK--SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           +  ++  +C   ++++A  LL +M K G   +   +  LI  L K   +  A   LE M 
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
            +G   + E +N ++  L K  +I+ A  +   M ++    D  TY  +++ LCK  R+ 
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +A  L     K  + I  +    ++ G    G   +AK + S +
Sbjct: 340 AAKDLFYRIPKPEIVIFNT----LIHGFVTHGRLDDAKAVLSDM 379



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 1/264 (0%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKE 207
            + +++  L  N       R+   ++  G V +   +  +++   KAG   +T R +L+ 
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
                  P   +Y  +++       +K+   +   M  +      F +  V+ AF  +  
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           +  A   +  M   G   + V Y TLI+   K  ++  A  LL+EM   G   D  T   
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
           +I GLCK   I  A   +  M   GF  +   Y  +++ L K G++D A ++F  +   +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352

Query: 388 SFTYSSMVHNLCKAKRLPSASKLL 411
              +++++H      RL  A  +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVL 376


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 228/436 (52%), Gaps = 4/436 (0%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA  L++A  +    +  G++PD+ TY++LI+ +C          +L  M + G+ P+ +
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TYN+LI G  R   +  +  + DEM+  GI  ++  +N+L++ + + GK ++A  + Q+M
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   + P + T+++++ G C+ +    A  +   ++K    P ++TY+++I GLC+ G L
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           +    IL+E+  +G  PNA+ YTT+M    +  + +    IL  M+ +G   D F Y ++
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I  F K  R++EA  Y+ +M+   ++ +  +Y   I+ Y K G++E A    +EM   G 
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +   +T LI+G CK GN+  A     ++       +++ Y+ ++  L ++GK+  A  
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +F  ++ K    ++FTY+S++   CK   +  AS+LL      G+         ++DGL 
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672

Query: 435 HSGCRREAKKIQSKIR 450
            +G    AK +   I 
Sbjct: 673 KAGEIERAKNLFDDIE 688



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 204/413 (49%), Gaps = 4/413 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F +   +E+A  I  + +  G+  +++ +N L++  C+    +    I+  M E
Sbjct: 315 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD  TY+ LI G  R   ++ + +LLDEM +  + P V +Y+ +++ L + G    
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            N + ++M+   L P    +  ++    K    + +  +   +++ G +P++  YN LI 
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKA R+  AR  L E+ +    PNA TY   +    +  + ++     + M   G   
Sbjct: 495 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 554

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K G + EA      +++  V  D+ +Y+ LI+   + GK+  A+ + 
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            E++++G   + +T+  LI G CK GN+  A   LE M   G + ++  YN ++D L K 
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           G+I+ A N+F+ +E      +  TY++MV   CK+K   +A +LL   L  GV
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 727



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 215/448 (47%), Gaps = 7/448 (1%)

Query: 4   KLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           KL+  +L  ++ +   C+   L+   AI+ + +  G+ P+ V Y  L+ A+ +    +  
Sbjct: 411 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 470

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             IL RMRE GI PDV  YNSLI G  +   +  +   L EMLE  + P+  +Y + +  
Sbjct: 471 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             + G+ + A+R F +M+   + P    +  ++ G CK      A  +FR +     + +
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + TY++LI GL + G++  A  I  EL + G  PNA TY +++    +        ++L 
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M  KG   D   Y  +I    K G ++ A +  + +   G+  + V+Y  +++ YCK  
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
              AA+ LL+EM  +G   D + + ++++  CK    + A    + M + GF S + ++N
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFN 769

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++   K GK+  A ++ E M     + +  TY+S++ + CKA  +  A +L L   + 
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKI 445
            V        +++ G  + G   E   +
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSAL 857



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 210/441 (47%), Gaps = 27/441 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + KA  +E A+    + +  GVLP+V  Y  LI+ +C+  +    +++   +    +  D
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY+ LI G +RN  +  +  +  E+ E G+ P+ ++YNSL+    + G  D+A+++ +
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T+NI+++GLCK    + A  +F  ++  G  P  VTY  ++ G CK+ 
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +L+E+   G  P+A  Y  I+  C +  K++  L++   M  KG+      + 
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFN 769

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K G+L+EA   +E+M+      + V+Y +LI+  CK G +  A  L  EM+++
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 829

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                  T+T L+ G    GN+       E M   G + +   Y  ++D   ++G     
Sbjct: 830 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG----- 884

Query: 377 INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
            NV E+ ++KD      M                    +KSG R+       +  G + +
Sbjct: 885 -NVMEACKLKDEILVKGMP-------------------MKSGFRLGLPTCSVIARGFQIA 924

Query: 437 GCRREAKKI-QSKIRMAKISH 456
           G   EA ++ +S ++   +S+
Sbjct: 925 GNMDEAAEVLRSMVKFGWVSN 945



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 195/395 (49%), Gaps = 21/395 (5%)

Query: 5   LSTRLL------NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF 58
           LS R+L      ++ +    +  ++ +A  I  +    G+LP+  TYN LI   C+  + 
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D    +L  M   GI+PD+VTYN LI G  +   +  + +L D++   G+ P+  +Y ++
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +    +   P  A ++ ++M+   + P    +N++LN  CK    + AL +F+ + + GF
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF 762

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYK 234
               V++N LI+G CK+G+L+ A  +L+E+ +    PN +TYT+++    K        +
Sbjct: 763 A-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 821

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           L LE    M+ +        Y +++  +  IG + E +   E+MV  G++ D ++Y  +I
Sbjct: 822 LWLE----MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 877

Query: 295 NLYCKEGKLEAAYLLLDEM------EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           + YC+EG +  A  L DE+       K GF     T +++  G   AGN+  A   L  M
Sbjct: 878 DAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 937

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            K G+ SN  +   +VD        + + N+ + M
Sbjct: 938 VKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 220/471 (46%), Gaps = 25/471 (5%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  ++ + ++ + ++ K   L +A  + +        P +++ N L+    +    +  +
Sbjct: 150 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 209

Query: 63  TILNRMREAGISPDVVTYNSLIAG-----------------ATRNSLLSCSLDLLDEMLE 105
            + + M    + PDV TY ++I+                    +  LL  +++L   M++
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVD 269

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G+ PD+++Y+ L++      +  EA  +  +MI   L P   T+N +++G  +    + 
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A R+   +   G    L+ +N L+ G+CKAG++  A  I++E+ + G  P++ TY+ +++
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              R +      E+L  MK++        Y  +I    + G L+     + +MV +G++ 
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           + V Y TL+  + KEG++E + ++L+ M +QG   D + +  LI G CKA  ++ AR +L
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKA 401
             M +     N   Y   +D   K G+++ A   F  M     + +   Y++++   CK 
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 569

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIR 450
             +  A  +    L    R+L+  Q    ++ GL  +G   EA  I S+++
Sbjct: 570 GNVTEAFSVFRFILSR--RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 8/214 (3%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  ST   N  +  +CK+ +L++A  ++ + I    +P+ VTY  LID  C+        
Sbjct: 761 GFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M+E  + P   TY SL+ G      +S    L +EM+  GI PD  +Y  ++   
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATF-------NIMLNGLCKNRYTDNALRMFRGLQK 175
            + G   EA ++ +D I     P  + F       +++  G       D A  + R + K
Sbjct: 881 CREGNVMEACKL-KDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 939

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
            G+V    +   L+ G         +  +LK++ 
Sbjct: 940 FGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 218/447 (48%), Gaps = 12/447 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  RL   + +++D  + G++P+ VTYN L+  YC+  S    + I+  M++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+ TYN LI G      +   L+L+D M  + + PDV +YN+L+   F+LG   E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILI 189
           A ++ + M    +     T NI L  LCK    +   R  + L   HGF P++VTY+ LI
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           K   K G L  A  +++E+G  G   N IT  TI+    + RK      +L++  ++G+ 
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  F +  ++++A +  ++M    +   + ++N+LI   C  GK E A   
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN---KIGFDSNLEAYNCIVDR 366
            DE+ + G   D  T   +I G CK G ++ A    E+ N   K  F  +    N +++ 
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKA---FEFYNESIKHSFKPDNYTCNILLNG 600

Query: 367 LGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K+G  + A+N F    E  EV D+ TY++M+   CK K+L  A  LL    + G+   
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +    + +  L   G   E  ++  K 
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKF 686



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 226/444 (50%), Gaps = 6/444 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+   L I +  +  +  +  A  +  D +++GV  +V T+N+L++ YC     +    +
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226

Query: 65  LNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           L RM  E  ++PD VTYN+++   ++   LS   +LL +M + G+ P+  +YN+L++   
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC 286

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG   EA ++ + M   ++ P   T+NI++NGLC        L +   ++     P++V
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV 346

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSA 242
           TYN LI G  + G    AR +++++ + G   N +T+   +K  C   ++  +  ++   
Sbjct: 347 TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   G++ D   Y T+I A++K+G L  A + M +M   G++++ ++ NT+++  CKE K
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+ A+ LL+   K+GF  D+ T+  LI G  +   ++ A    + M K+     +  +N 
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526

Query: 363 IVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++  L   GK + A+  F    ES  + D  T++S++   CK  R+  A +     +K  
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586

Query: 419 VRILKSAQKAVVDGLRHSGCRREA 442
            +        +++GL   G   +A
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKA 610



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 9/419 (2%)

Query: 28  AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           +++   + L   P    +++ + AY           I  +M    + P+++T N+L+ G 
Sbjct: 117 SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGL 176

Query: 88  TR---NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DL 143
            R   +  +S + ++ D+M+++G+  +V ++N L++     GK ++A  + + M+    +
Sbjct: 177 VRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKV 236

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P   T+N +L  + K     +   +   ++K+G VP  VTYN L+ G CK G L+ A  
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           I++ +  +   P+  TY  ++         + GLE++ AMK      D   Y T+I    
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDK 322
           ++G   EA   MEQM  DGV+ + V++N  +   CKE K EA    + E+ +  GF  D 
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  LI    K G++ GA   +  M + G   N    N I+D L K+ K+D A N+  S
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                 + D  TY +++    + +++  A ++     K  +    S   +++ GL H G
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++T  LN  +   CK  +L++A  ++    + G + D VTY  LI  + +    +    
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M++  I+P V T+NSLI G   +     +++  DE+ E G+ PD  ++NS++    
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ ++A   + + I     P   T NI+LNGLCK   T+ AL  F  L +   V + V
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTV 626

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-- 241
           TYN +I   CK  +L+ A  +L E+ + G  P+  TY + +     + K     E+L   
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686

Query: 242 -----AMKR----------------KGYTFDGFGYCTVIAAFVKIGRLKEAT 272
                +MKR                +    +   Y  VI      GRLKE +
Sbjct: 687 SGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHS 738



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 8/173 (4%)

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 346
           ++  ++ Y  EGK   A  +  +M +   + +  T   L+ GL +   + +I  AR   +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVK---DSFTYSSMVHNLCKA 401
            M KIG   N++ +N +V+    +GK++ A+ + E M  E K   D+ TY++++  + K 
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            RL    +LLL   K+G+   +     +V G    G  +EA +I   ++   +
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 214/422 (50%), Gaps = 4/422 (0%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I  G+ P V TYN++ID  C+    +    +  +MRE G+SPDVVTYNSLI G  +  
Sbjct: 279 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 338

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L     L +EM ++G  PD+ +YN L++C  +  K   A   F +M    L P   T++
Sbjct: 339 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 398

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++  CK      A+++F  +++ G +P   TY  LI   CKAG L  A  +L ++  +
Sbjct: 399 TLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA 458

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G   N +TYT ++    +  +     E+  +M + G + +   Y  ++  ++K  R+++A
Sbjct: 459 GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDA 518

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              ++QM    ++ D++ Y ++I  +C + KLE   L+L+EM+ +G   +    T +ID 
Sbjct: 519 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 578

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KD 387
             KAG    A    + M  +G ++ +  Y  ++D L K G ++ A++ F  M       +
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              Y+S++  LCK   + SA KL       G+    +A  A++DG    G  +EA  + S
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698

Query: 448 KI 449
           ++
Sbjct: 699 RM 700



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 208/439 (47%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   LE +  + +    +G+ PDVVTYN LID Y +  S +   ++ N M++
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD++TYN LI    +   +  + +   EM   G+ P+V +Y++L+    + G    
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 412

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F DM    L P   T+  +++  CK      A ++   + + G    +VTY  L+ 
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 472

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAGR+  A  + + +   G +PN   YT ++    +  + +  ++IL  M       
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 532

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I       +L+E    +E+M + G+  + V   T+I+ Y K GK   A    
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 592

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+  G E    T+ +LIDGLCKAG ++ A  +   M  +G   N+  Y  ++D L K+
Sbjct: 593 QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             I+ A  +F+ M+ +    D   +++++    K   L  A  L+    +  +       
Sbjct: 653 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 712

Query: 427 KAVVDGLRHSGCRREAKKI 445
            ++V G    G   +A+K 
Sbjct: 713 TSLVSGFSQCGELHQARKF 731



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 185/367 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++ +A     +    G+ P+VVTY+ LIDA+C+         +   MR  G+ P+
Sbjct: 369 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPN 428

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY SLI    +   L+ +  LL++ML+ G+  ++ +Y +L+  L + G+  EA  VF+
Sbjct: 429 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 488

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++P    +  +++G  K    ++A+++ + + +    P+L+ Y  +I G C   
Sbjct: 489 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 548

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L   + IL+E+   G + N +  TTI+   F+  K    L     M+  G       YC
Sbjct: 549 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 608

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G ++ A DY  +M++ G+Q ++  Y +LI+  CK   +E+A  L DEM+ +
Sbjct: 609 VLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR 668

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D    T LIDG  K GN++ A + +  M ++  + +L  Y  +V    + G++  A
Sbjct: 669 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 728

Query: 377 INVFESM 383
              F  M
Sbjct: 729 RKFFNEM 735



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 163/338 (48%), Gaps = 6/338 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   S N L+H L + G      + F DMI   + P   T+N+M++ LCK    +N+ R+
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  +++ G  P++VTYN LI G  K G L     +  E+ D G  P+ ITY  ++ C  +
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
             K     E  S MK  G   +   Y T+I AF K G ++ A      M   G+  +  +
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y +LI+  CK G L  A+ LL++M + G + +  T+T L+DGLCKAG +  A      M 
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 405
           K G   N + Y  +V    K  +++ A+ + + M       D   Y S++   C  ++L 
Sbjct: 492 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL- 550

Query: 406 SASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREA 442
             +KL+L  +KS G+         ++D    +G   +A
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 200/446 (44%), Gaps = 39/446 (8%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            +++L   + +    +      +RMR     P   + N L+   +++          ++M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +  GI P V++YN ++  L + G  + + R+F  M    L+P   T+N +++G  K    
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           +    +F  ++  G VP+++TYN LI   CK  ++  A     E+ ++G  PN +TY+T+
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +    +  +++   M+R G   + F Y ++I A  K G L EA   +  M+  GV
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-- 341
           +L+IV+Y  L++  CK G++  A  +   M K G   ++  +T L+ G  KA  ++ A  
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 342 ---------------------------------RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
                                            +L LE M   G  +N      I+D   
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580

Query: 369 KDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K GK   A+N F+ M+   V+ +  TY  ++  LCKA  +  A       L  G++   +
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
              +++DGL  + C   AKK+  +++
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQ 666



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 146/307 (47%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA R+ +AE +    ++ G+ P+   Y  L+  Y +    +    IL +M E  I PD+
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           + Y S+I G      L  +  +L+EM   GI  +     +++   F+ GK  +A   FQ+
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    +     T+ ++++GLCK    + A+  F  +   G  P +  Y  LI GLCK   
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           + +A+ +  E+   G  P+   +T ++    ++   +  L ++S M      FD   Y +
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +++ F + G L +A  +  +M+  G+  + V    L+  Y K G+L+ A  L +EME+ G
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774

Query: 318 FECDKYT 324
              +  T
Sbjct: 775 LITESAT 781



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 55/367 (14%)

Query: 99  LLDEMLEMGIP-----PDVWS-----------YNSLMHCLFQLGKPDEANRVFQDMICGD 142
           +++  ++MG P       +WS           ++ L     +LG  +EAN  F  M    
Sbjct: 190 IMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFR 249

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   + N +L+ L K+       + F  +   G  P + TYN++I  LCK G L  +R
Sbjct: 250 TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSR 309

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  ++ + G +P+ +TY +++                          DG+G        
Sbjct: 310 RLFVQMREMGLSPDVVTYNSLI--------------------------DGYG-------- 335

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K+G L+E      +M   G   DI++YN LIN YCK  K+  A+    EM+  G + + 
Sbjct: 336 -KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T++ LID  CK G ++GA      M + G   N   Y  ++D   K G +  A  +   
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 383 M---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M    VK +  TY++++  LCKA R+  A ++  S LK G+   +    A+V G   +  
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 439 RREAKKI 445
             +A KI
Sbjct: 515 MEDAMKI 521



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 155/336 (46%), Gaps = 35/336 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   ++ A  + +D  R G+LP+  TY  LIDA C+  +    + +LN M +AG+  +
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 463

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY +L+ G  +   +  + ++   ML+ GI P+   Y +L+H   +  + ++A ++ +
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 523

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRY---------------------------------- 162
            M   ++ P    +  ++ G C  R                                   
Sbjct: 524 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG 583

Query: 163 -TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            + +AL  F+ +Q  G    +VTY +LI GLCKAG +  A      +   G  PN   YT
Sbjct: 584 KSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYT 643

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           +++    +N   +   ++   M+ +G T D   +  +I   +K G L+EA   + +M   
Sbjct: 644 SLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 703

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
            ++ D+  Y +L++ + + G+L  A    +EM ++G
Sbjct: 704 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 221/481 (45%), Gaps = 77/481 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   ++KAE+I+   +  G+ PD+ TY+++ID  C+  + D    +L +M E
Sbjct: 173 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 232

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ +TYNSLI G + + + + S+ +  +M   G+ P V + NS +H LF+ G+ +E
Sbjct: 233 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 292

Query: 131 ANRVFQDMICGDLTP------------CTAT----------FNIMLN-GLCKNRYT---- 163
           A  +F  M+     P             TAT          FN+ML  G+  N++     
Sbjct: 293 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 352

Query: 164 ----------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
                     D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL  A      + D G 
Sbjct: 353 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 412

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CTVIAAFVKIGRLKEAT 272
            P+   Y  +++ C  + +     E++S M  K     G  Y  ++I    K GR+ E  
Sbjct: 413 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 472

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D M+ MV  G + ++V++N+L+  YC  G +E A+ LLD M   G E + Y +  L+DG 
Sbjct: 473 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 532

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C                                   K+G+ID A+ VF  M  K     S
Sbjct: 533 C-----------------------------------KNGRIDDALTVFRDMLHKGVKPTS 557

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             YS ++H L +A+R  +A K+    ++SG  +       V+ GL  + C  EA  +  K
Sbjct: 558 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 617

Query: 449 I 449
           +
Sbjct: 618 L 618



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 8/388 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + TYN+LID Y +    D G  I+ R+ + G+ PD  +Y SLI G  ++  +  +  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM+E G+ P +   NS++  L ++ + D+A  + Q M+   + P   T++++++GLCK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           ++  D A R+   + + G  P  +TYN LI G   +G    +  + K++   G  P    
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQ 277
             + +   F++ +      I  +M  KG   D   Y T++  +       L +  +    
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+T G+  +   +N LIN Y + G ++ A L+ ++M+ +G   D  T   +I  LC+ G 
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YS 392
           +  A     +M  IG   +   Y C++      G++  A  +   M  KD        +S
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           S+++NLCK  R+     ++   +++G R
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQR 484



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 406

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ L + G
Sbjct: 407 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 466

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + A  +   +   G  P    Y 
Sbjct: 467 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 526

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+  A  + +++   G  P ++ Y+ I+   F+ R+     ++   M   
Sbjct: 527 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 586

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  V+    +     EA   +E++    V+ DI+++N +I+   K G+ + A
Sbjct: 587 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 646

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L D +   G   +  T++++I  L K  + + A      + K G  S+    N IV  
Sbjct: 647 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 706

Query: 367 LGKDGKIDHAIN 378
           L    ++  A N
Sbjct: 707 LLNKAEVAKASN 718



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 148/294 (50%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  R+ + + I+   ++ G  P+VVT+N L++ YC   + +  + +L+ M   GI
Sbjct: 459 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 518

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+   Y +L+ G  +N  +  +L +  +ML  G+ P    Y+ ++H LFQ  +   A +
Sbjct: 519 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 578

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F +MI    T    T+ ++L GLC+N  TD A  +   L       +++T+NI+I  + 
Sbjct: 579 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 638

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A+ +   +   G  PN  TY+ ++    +   Y+    +  ++++ G+  D  
Sbjct: 639 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 698

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
               ++   +    + +A++Y+  +  + + L+  + + L +L+ +EG ++  +
Sbjct: 699 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLF 752



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 5/380 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+LI+AY +    D    I   M+  G+ PD VT+ ++I+   R   L  +
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLN 155
           L   + M+++G+PP    Y  L+      G+  +A  +  +M+  D+ P     F+ ++N
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 460

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK         +   + + G  P +VT+N L++G C  G +  A  +L  +   G  P
Sbjct: 461 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 520

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y T++    +N +    L +   M  KG       Y  ++    +  R   A    
Sbjct: 521 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 580

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A +LL+++     + D  T  I+I  + K 
Sbjct: 581 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 640

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G  + A+   + ++  G   N++ Y+ ++  L K+   + A N+F S+E      DS   
Sbjct: 641 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 700

Query: 392 SSMVHNLCKAKRLPSASKLL 411
           + +V  L     +  AS  L
Sbjct: 701 NHIVRMLLNKAEVAKASNYL 720



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP + +YN L+ C  ++ +PD    +   ++   L P   +++++  G  K+   D A  
Sbjct: 97  PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 155

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  + + G +P+++  N +IK LCK   +  A  I++++ DSG AP+  TY+ I+    
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +++       +L  M   G   +   Y ++I  +   G   E+    +QM + GV   + 
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 346
           + N+ I+   K G+   A  + D M  +G + D  +++ ++ G   A +   A +H    
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M   G   N   +N +++   + G +D A+ +FE M+    + D+ T+++++ +LC+  
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           RL  A       +  GV   ++    ++ G  + G   +AK++ S++
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 37/208 (17%), Positives = 81/208 (38%), Gaps = 35/208 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ L +I +    +A R   A+ +  + I  G    + TY +++   C+    D    
Sbjct: 554 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 613

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L ++    +  D++T+N +I+                                    +F
Sbjct: 614 LLEKLFAMNVKFDIITFNIVISA-----------------------------------MF 638

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+  EA  +F  +    L P   T+++M+  L K    + A  +F  ++K G   +  
Sbjct: 639 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 698

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDS 211
             N +++ L     +  A   L  +G++
Sbjct: 699 LLNHIVRMLLNKAEVAKASNYLSIIGEN 726


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 225/437 (51%), Gaps = 4/437 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RL +A  +++D    G+ P+  T+N+L+   C+         ++  M +  + PD
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN +I+G  +   ++ ++ L +EM  + + PDV +YN+L++  F+ G  +E  ++ +
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P + T+N+M+    K    D   +  R +++ G +P++VTYN LI   CK G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  ++ E+G  G   + +T  T+++   R RK     ++L + +R+GY  D   Y 
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K  +  +A    ++M    +   I++YN++I   C+ GK   A   LDE+ + 
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D+ T+  +I G C+ G ++ A      M +  F  ++   N ++  L K+G ++ A
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + +F +   K    D+ +Y++++ +LCK KR   A  LL    +  +        A++ G
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661

Query: 433 LRHSGCRREAKKIQSKI 449
           L  +G  ++A++  SKI
Sbjct: 662 LTDAGRMKDAEEFISKI 678



 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 228/452 (50%), Gaps = 7/452 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA---G 61
           +S  LL+I +  +    R  +A  I     RLG+ P ++T N L++A  +F S  +    
Sbjct: 122 ISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLS 181

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +     + G+  +  ++N LI G+   +    ++ +L +M + G PPD  +YN+++  
Sbjct: 182 KAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDG 241

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L + G+ +EA  +  DM    L P   TFNI++ G C+  +   A  +   + ++  VP+
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
             TYN++I G CK GR+  A  + +E+ +   +P+ +TY T++  CF +   + G +++ 
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M+ +G   +   Y  ++  FVK G++ E    + +M   G   DIV+YNTLI+ +CK G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K++ A+ L+DEM ++G + D  T   ++  LC+   +  A   L    + G+  +  +Y 
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++    K  K   A+ +++ M+ K+      TY+SM+  LC+  +   A   L   L+S
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           G+   +     ++ G    G   +A +  +K+
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 200/428 (46%), Gaps = 43/428 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK  R+ +A  +  +   L + PDVVTYN LI+   +  S + G+ ++  M  
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VTYN ++    +   +      + +M E G  PD+ +YN+L+    ++GK DE
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDE 425

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD-------------------------- 164
           A R+  +M    L     T N ML  LC+ R  D                          
Sbjct: 426 AFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLII 485

Query: 165 ---------NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                     ALR++  +++   +P ++TYN +I GLC+ G+   A   L EL +SG  P
Sbjct: 486 GYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVP 545

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ITY TI+    +  + +   +  + M  K +  D     T++    K G L++A    
Sbjct: 546 DEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLF 605

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
              ++ G  +D VSYNT+I   CKE +   A+ LL+EME++    D YT+  ++ GL  A
Sbjct: 606 NTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDA 665

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
           G +K A    E+++KI      E  N  ++ LGK  + D   +        ++  YS+ +
Sbjct: 666 GRMKDAE---EFISKIAEKGKSE--NQFLE-LGK--RQDARTSEIPQEPHPNAIAYSNKI 717

Query: 396 HNLCKAKR 403
           + LC   R
Sbjct: 718 NELCSQGR 725



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 12/299 (4%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+    LN  +   C+  +L++A  ++    R G   D V+Y  LI  Y +         
Sbjct: 439 KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALR 498

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M+E  I P ++TYNS+IAG  +    + ++D LDE+LE G+ PD  +YN+++H   
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q G+ ++A +    M+  +  P   T N +L GLCK    + AL++F      G   + V
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YN +I  LCK  R   A  +L+E+ +    P+  TY  I+       + K   E +S +
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
             KG + +          F+++G+ ++A       +      + ++Y+  IN  C +G+
Sbjct: 679 AEKGKSEN---------QFLELGKRQDART---SEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 218/481 (45%), Gaps = 77/481 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   ++KAE+I+   +  G+ PD+ TY+++ID  C+  + D    +L +M E
Sbjct: 87  NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 146

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ +TYNSLI G + + + + S+ +  +M   G+ P V + NS +H LF+ G+ +E
Sbjct: 147 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 206

Query: 131 ANRVFQDMICGDLTP------------CTAT-------------------------FNIM 153
           A  +F  M+     P             TAT                         FNI+
Sbjct: 207 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 266

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +N   +    D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL  A      + D G 
Sbjct: 267 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 326

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CTVIAAFVKIGRLKEAT 272
            P+   Y  +++ C  + +     E++S M  K     G  Y  ++I    K GR+ E  
Sbjct: 327 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 386

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D M+ MV  G + ++V++N+L+  YC  G +E A+ LLD M   G E + Y +  L+DG 
Sbjct: 387 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 446

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C                                   K+G+ID A+ VF  M  K     S
Sbjct: 447 C-----------------------------------KNGRIDDALTVFRDMLHKGVKPTS 471

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             YS ++H L +A+R  +A K+    ++SG  +       V+ GL  + C  EA  +  K
Sbjct: 472 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 531

Query: 449 I 449
           +
Sbjct: 532 L 532



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 8/388 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + TYN+LID Y +    D G  I+ R+ + G+ PD  +Y SLI G  ++  +  +  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM+E G+ P +   NS++  L ++ + D+A  + Q M+   + P   T++++++GLCK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           ++  D A R+   + + G  P  +TYN LI G   +G    +  + K++   G  P    
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQ 277
             + +   F++ +      I  +M  KG   D   Y T++  +       L +  +    
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+T G+  +   +N LIN Y + G ++ A L+ ++M+ +G   D  T   +I  LC+ G 
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YS 392
           +  A     +M  IG   +   Y C++      G++  A  +   M  KD        +S
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           S+++NLCK  R+     ++   +++G R
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQR 398



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 261 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 320

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ L + G
Sbjct: 321 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 380

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + A  +   +   G  P    Y 
Sbjct: 381 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 440

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+  A  + +++   G  P ++ Y+ I+   F+ R+     ++   M   
Sbjct: 441 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 500

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  V+    +     EA   +E++    V+ DI+++N +I+   K G+ + A
Sbjct: 501 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 560

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L D +   G   +  T++++I  L K  + + A      + K G  S+    N IV  
Sbjct: 561 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 620

Query: 367 LGKDGKIDHAIN 378
           L    ++  A N
Sbjct: 621 LLNKAEVAKASN 632



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 145/286 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+ + + I+   ++ G  P+VVT+N L++ YC   + +  + +L+ M   GI P+
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y +L+ G  +N  +  +L +  +ML  G+ P    Y+ ++H LFQ  +   A ++F 
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 495

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI    T    T+ ++L GLC+N  TD A  +   L       +++T+NI+I  + K G
Sbjct: 496 EMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVG 555

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R + A+ +   +   G  PN  TY+ ++    +   Y+    +  ++++ G+  D     
Sbjct: 556 RRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLN 615

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            ++   +    + +A++Y+  +  + + L+  + + L +L+ +EGK
Sbjct: 616 HIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 661



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 189/426 (44%), Gaps = 8/426 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+LI+AY +    D    I   M+  G+ PD VT+ ++I+   R   L  +
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLN 155
           L   + M+++G+PP    Y  L+      G+  +A  +  +M+  D+ P     F+ ++N
Sbjct: 315 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 374

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK         +   + + G  P +VT+N L++G C  G +  A  +L  +   G  P
Sbjct: 375 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 434

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y T++    +N +    L +   M  KG       Y  ++    +  R   A    
Sbjct: 435 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 494

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A +LL+++     + D  T  I+I  + K 
Sbjct: 495 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 554

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G  + A+   + ++  G   N++ Y+ ++  L K+   + A N+F S+E      DS   
Sbjct: 555 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 614

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAKKIQSKI 449
           + +V  L     +  AS   LS +      L+++  +++  L  R    R   K + + +
Sbjct: 615 NHIVRMLLNKAEVAKASN-YLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPANM 673

Query: 450 RMAKIS 455
            MA ++
Sbjct: 674 TMAVVA 679



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP + +YN L+ C  ++ +PD    +   ++   L P   +++++  G  K+   D A  
Sbjct: 11  PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 69

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  + + G +P+++  N +IK LCK   +  A  I++++ DSG AP+  TY+ I+    
Sbjct: 70  LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +++       +L  M   G   +   Y ++I  +   G   E+    +QM + GV   + 
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 189

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 346
           + N+ I+   K G+   A  + D M  +G + D  +++ ++ G   A +   A +H    
Sbjct: 190 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 249

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M   G   N   +N +++   + G +D A+ +FE M+    + D+ T+++++ +LC+  
Sbjct: 250 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 309

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           RL  A       +  GV   ++    ++ G  + G   +AK++ S++
Sbjct: 310 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 356



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 36/366 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTY-NMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C    L KA+ +I + +   + P  V Y + +I+  C+      G  I++ M + G  P+
Sbjct: 341 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 400

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+NSL+ G      +  +  LLD M  +GI P+ + Y +L+    + G+ D+A  VF+
Sbjct: 401 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 460

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   + P +  ++I+L+GL + R T  A +MF  + + G    + TY +++ GLC+  
Sbjct: 461 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 520

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +                                LE L AM  K   FD   + 
Sbjct: 521 CTDEANML--------------------------------LEKLFAMNVK---FDIITFN 545

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI+A  K+GR +EA +  + + T G+  +I +Y+ +I    KE   E A  L   +EK 
Sbjct: 546 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 605

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D      ++  L     +  A  +L  + +          + +     ++GK    
Sbjct: 606 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREH 665

Query: 377 INVFES 382
           I +  +
Sbjct: 666 IKLLPA 671



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 107/226 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  R++ A  +  D +  GV P  V Y++++    Q     A   + + M E+G +  
Sbjct: 446 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 505

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY  ++ G  RN+    +  LL+++  M +  D+ ++N ++  +F++G+  EA  +F 
Sbjct: 506 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 565

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    L P   T+++M+  L K    + A  +F  ++K G   +    N +++ L    
Sbjct: 566 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 625

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +  A   L  +G++     A T + +     R  KY+  +++L A
Sbjct: 626 EVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPA 671



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/132 (19%), Positives = 63/132 (47%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ L +I +    +A R   A+ +  + I  G    + TY +++   C+    D    
Sbjct: 468 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 527

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L ++    +  D++T+N +I+   +      + +L D +   G+ P++ +Y+ ++  L 
Sbjct: 528 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 587

Query: 124 QLGKPDEANRVF 135
           +    +EA+ +F
Sbjct: 588 KEESYEEADNLF 599


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 221/493 (44%), Gaps = 54/493 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC A  L+ A        + G LP+VVTYN LID YC+    D G+ +L  M  
Sbjct: 209 NILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMAL 268

Query: 71  AGISP-----------------------------------DVVTYNSLIAGATRNSLLSC 95
            G+ P                                   D VTYN+LI G  +      
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L +  EML  G+ P V +Y SL+H + + G  + A      M    L P   T+  +++
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVD 388

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +  Y + A R+ + +  +GF P +VTYN LI G C AG++  A  +L+++ + G  P
Sbjct: 389 GFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP 448

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y+T++    R+      L +   M  KG   D   Y ++I  F +  R KEA D  
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF 508

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+  G+  D  +Y  LIN YC EG L+ A  L +EM ++G   D  T+++LI+GL K 
Sbjct: 509 DEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 336 GNIKGAR---LHLEYMNKIGFD----------SNLEAYNCI--VDRLGKDGKIDHAINVF 380
              + A+   L L Y   +  D          SN+E  + +  +      G +  A  VF
Sbjct: 569 ARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           ESM  K    D   Y+ M+H  C+   +  A  L    +KSG  +      A+V  L   
Sbjct: 629 ESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKE 688

Query: 437 GCRREAKKIQSKI 449
           G   E   + + +
Sbjct: 689 GKVNELNSVIANV 701



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 211/410 (51%), Gaps = 5/410 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEM 103
           +++++ +Y +    D   +I++  +  G  P V++YN+++    R+   +S + ++  EM
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           L+  + P+V++YN L+      G  D A R F  M      P   T+N +++G CK R  
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+   + R +   G  P L++YN++I GLC+ GR++   ++L E+   G++ + +TY T+
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +K   +   +   L + + M R G +     Y ++I +  K G +  AT++++QM   G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             +  +Y TL++ + ++G +  AY +L EM   GF     T+  LI+G C AG +  A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            LE M + G   ++ +Y+ ++    +   +D A+ V   M  K    D+ TYSS++   C
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +R   A  L    L+ G+   +    A+++     G  ++A ++ +++
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 223/451 (49%), Gaps = 9/451 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF---VSFDAGY 62
           ++ + ++ V ++ +   ++KA +I+      G +P V++YN ++DA  +    +SF    
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF--AE 190

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M ++ +SP+V TYN LI G      L  +L   D M + G  P+V +YN+L+   
Sbjct: 191 NVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGY 250

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +L K D+   + + M    L P   ++N+++NGLC+         +   + K G+  + 
Sbjct: 251 CKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDE 310

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN LIKG CK G    A  +  E+   G +P+ ITYT+++    +        E L  
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ +G   +   Y T++  F + G + EA   +++M+ +G    +V+YN LIN +C  GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A  +L++M+++G   D  +++ ++ G C++ ++  A      M   G   +   Y+ 
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS 490

Query: 363 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++    +  +   A ++F+ M       D FTY+++++  C    L  A +L    ++ G
Sbjct: 491 LIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           V         +++GL      REAK++  K+
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKL 581



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 15/323 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C A ++  A A++ D    G+ PDVV+Y+ ++  +C+    D    +  +M  
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA 478

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD +TY+SLI G         + DL DEML +G+PPD ++Y +L++     G   +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQK 538

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI- 189
           A ++  +M+   + P   T+++++NGL K   T  A R+   L     VP  VTY+ LI 
Sbjct: 539 AIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE 598

Query: 190 --------------KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
                         KG C  G +  A  + + + +  H P+   Y  ++    R    + 
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRK 658

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +   M + G+         ++    K G++ E    +  ++      +      L+ 
Sbjct: 659 AYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVE 718

Query: 296 LYCKEGKLEAAYLLLDEMEKQGF 318
           +  +EG ++    +L EM K GF
Sbjct: 719 INHREGNMDVVLDVLAEMAKDGF 741



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 15/251 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+  R ++A  +  + +R+G+ PD  TY  LI+AYC          + N M E G+ PD
Sbjct: 495 FCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPD 554

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYN--------------SLMHC 121
           VVTY+ LI G  + +    +  LL ++  E  +P DV  +               SL+  
Sbjct: 555 VVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
               G   EA++VF+ M+  +  P    +N+M++G C+      A  +++ + K GF+  
Sbjct: 615 FCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLH 674

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            VT   L+K L K G++     ++  +  S     A     +++   R     + L++L+
Sbjct: 675 TVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734

Query: 242 AMKRKGYTFDG 252
            M + G+  +G
Sbjct: 735 EMAKDGFLPNG 745


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 218/481 (45%), Gaps = 77/481 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   ++KAE+I+   +  G+ PD+ TY+++ID  C+  + D    +L +M E
Sbjct: 249 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ +TYNSLI G + + + + S+ +  +M   G+ P V + NS +H LF+ G+ +E
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 131 ANRVFQDMICGDLTP------------CTAT-------------------------FNIM 153
           A  +F  M+     P             TAT                         FNI+
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 428

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +N   +    D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL  A      + D G 
Sbjct: 429 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 488

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CTVIAAFVKIGRLKEAT 272
            P+   Y  +++ C  + +     E++S M  K     G  Y  ++I    K GR+ E  
Sbjct: 489 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 548

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D M+ MV  G + ++V++N+L+  YC  G +E A+ LLD M   G E + Y +  L+DG 
Sbjct: 549 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 608

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C                                   K+G+ID A+ VF  M  K     S
Sbjct: 609 C-----------------------------------KNGRIDDALTVFRDMLHKGVKPTS 633

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             YS ++H L +A+R  +A K+    ++SG  +       V+ GL  + C  EA  +  K
Sbjct: 634 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 693

Query: 449 I 449
           +
Sbjct: 694 L 694



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 8/388 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + TYN+LID Y +    D G  I+ R+ + G+ PD  +Y SLI G  ++  +  +  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM+E G+ P +   NS++  L ++ + D+A  + Q M+   + P   T++++++GLCK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           ++  D A R+   + + G  P  +TYN LI G   +G    +  + K++   G  P    
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQ 277
             + +   F++ +      I  +M  KG   D   Y T++  +       L +  +    
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+T G+  +   +N LIN Y + G ++ A L+ ++M+ +G   D  T   +I  LC+ G 
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YS 392
           +  A     +M  IG   +   Y C++      G++  A  +   M  KD        +S
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           S+++NLCK  R+     ++   +++G R
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQR 560



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 423 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 482

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ L + G
Sbjct: 483 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 542

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + A  +   +   G  P    Y 
Sbjct: 543 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 602

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+  A  + +++   G  P ++ Y+ I+   F+ R+     ++   M   
Sbjct: 603 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 662

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  V+    +     EA   +E++    V+ DI+++N +I+   K G+ + A
Sbjct: 663 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 722

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L D +   G   +  T++++I  L K  + + A      + K G  S+    N IV  
Sbjct: 723 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 782

Query: 367 LGKDGKIDHAIN 378
           L    ++  A N
Sbjct: 783 LLNKAEVAKASN 794



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 146/289 (50%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  R+ + + I+   ++ G  P+VVT+N L++ YC   + +  + +L+ M   GI
Sbjct: 535 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 594

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+   Y +L+ G  +N  +  +L +  +ML  G+ P    Y+ ++H LFQ  +   A +
Sbjct: 595 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 654

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F +MI    T    T+ ++L GLC+N  TD A  +   L       +++T+NI+I  + 
Sbjct: 655 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 714

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A+ +   +   G  PN  TY+ ++    +   Y+    +  ++++ G+  D  
Sbjct: 715 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 774

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
               ++   +    + +A++Y+  +  + + L+  + + L +L+ +EGK
Sbjct: 775 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 823



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 5/380 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+LI+AY +    D    I   M+  G+ PD VT+ ++I+   R   L  +
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLN 155
           L   + M+++G+PP    Y  L+      G+  +A  +  +M+  D+ P     F+ ++N
Sbjct: 477 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 536

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK         +   + + G  P +VT+N L++G C  G +  A  +L  +   G  P
Sbjct: 537 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 596

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y T++    +N +    L +   M  KG       Y  ++    +  R   A    
Sbjct: 597 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 656

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A +LL+++     + D  T  I+I  + K 
Sbjct: 657 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 716

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G  + A+   + ++  G   N++ Y+ ++  L K+   + A N+F S+E      DS   
Sbjct: 717 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 776

Query: 392 SSMVHNLCKAKRLPSASKLL 411
           + +V  L     +  AS  L
Sbjct: 777 NHIVRMLLNKAEVAKASNYL 796



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP + +YN L+ C  ++ +PD    +   ++   L P   +++++  G  K+   D A  
Sbjct: 173 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 231

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  + + G +P+++  N +IK LCK   +  A  I++++ DSG AP+  TY+ I+    
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +++       +L  M   G   +   Y ++I  +   G   E+    +QM + GV   + 
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 346
           + N+ I+   K G+   A  + D M  +G + D  +++ ++ G   A +   A +H    
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 411

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M   G   N   +N +++   + G +D A+ +FE M+    + D+ T+++++ +LC+  
Sbjct: 412 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           RL  A       +  GV   ++    ++ G  + G   +AK++ S++
Sbjct: 472 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 518



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 107/226 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  R++ A  +  D +  GV P  V Y++++    Q     A   + + M E+G +  
Sbjct: 608 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 667

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY  ++ G  RN+    +  LL+++  M +  D+ ++N ++  +F++G+  EA  +F 
Sbjct: 668 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 727

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    L P   T+++M+  L K    + A  +F  ++K G   +    N +++ L    
Sbjct: 728 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKA 787

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +  A   L  +G++     A T + +     R  KY+  +++L A
Sbjct: 788 EVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPA 833



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/132 (19%), Positives = 63/132 (47%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ L +I +    +A R   A+ +  + I  G    + TY +++   C+    D    
Sbjct: 630 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 689

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L ++    +  D++T+N +I+   +      + +L D +   G+ P++ +Y+ ++  L 
Sbjct: 690 LLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLI 749

Query: 124 QLGKPDEANRVF 135
           +    +EA+ +F
Sbjct: 750 KEESYEEADNLF 761


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV TY+ LI+AYC+   FD    +L  MRE G   + VTYN LIAG  R+  +  +
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                +M + G+ PD ++Y +L++ L +  + +EA  +  +M C +L P    +  +++G
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             +    D A +M + +   G  P  +TY+ L++GLCK G++  A  +LK++    H P+
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY  I++  FR+   K    +LS M+  G + + + Y  +I    + G  ++A+D +E
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M T G++ +   Y  LI+ YC+EG +  A  + D+M K     D Y +  LI GL K G
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            ++ +  +   M + G   N   Y+ ++    K+G ++ A  + + M       +   Y 
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++ +  K+  +   S    S L  GV +       ++  L  SG    A ++ S I 
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 205/407 (50%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +    ++A  +I + +  GV P+ +TY+ L+   C+    D    +L +M      PD
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN +I G  R+     +  LL EM   GI P+V++Y+ ++H L Q G+P++A+ + +
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P    +  +++G C+      A  +F  + K   +P+L  YN LI GL K G
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  +     ++ + G  PN  TY+ ++    +N   +   +++  M   G   +   Y 
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++ ++ K   +++ +   + M+  GV LD   Y  LI+     G +EAA+ +L  +EK 
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 658

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D + ++ LI GLCK  + + A   L+ M+K G D N+  YN ++D L K G I +A
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NVF S+  K    +  TY+S++   CK   + +A  L    L +G+
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 215/449 (47%), Gaps = 4/449 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N+ +   C++  +E+A     D    G++PD  TY  LI+  C+    +    +
Sbjct: 277 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 336

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M  A + P+VV Y +LI G  R      +  ++ EM+  G+ P+  +Y++L+  L +
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G+ D A+ + + M+     P T T+N+++ G  ++    +A R+   ++  G  P + T
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLC++G    A  +L+E+   G  PNA  Y  ++    R     L  EI   M 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +     D + Y ++I    K+GR++E+T Y  QM   G+  +  +Y+ LI+ Y K G LE
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +A  L+  M   G + +   +  L++   K+ +I+      + M   G   +   Y  ++
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L   G ++ A  V   +E    V D   YSS++  LCK      A  +L    K GV 
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 696

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                  A++DGL  SG    A+ + + I
Sbjct: 697 PNIVCYNALIDGLCKSGDISYARNVFNSI 725



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 184/398 (46%), Gaps = 5/398 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   C++   EKA  ++ +    G+ P+   Y  LI  YC+  +      I ++M +
Sbjct: 458 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 517

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+  YNSLI G ++   +  S     +M E G+ P+ ++Y+ L+H   + G  + 
Sbjct: 518 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 577

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ Q M+   L P    +  +L    K+   +     F+ +   G + +   Y ILI 
Sbjct: 578 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 637

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L  +G +  A  +L  +  +G  P+   Y++++    +    +    IL  M +KG   
Sbjct: 638 NLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 697

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K G +  A +    ++  G+  + V+Y +LI+  CK G +  A+ L 
Sbjct: 698 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 757

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM   G   D + +++L  G   AG+++ A   +E M   G  S + ++N +VD   K 
Sbjct: 758 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS-ISSFNNLVDGFCKR 816

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           GK+   + +   +     V ++ T  +++  L +A +L
Sbjct: 817 GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 176/396 (44%), Gaps = 5/396 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +C+   +  A  I     ++ VLPD+  YN LI    +    +       +M+E G+
Sbjct: 496 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 555

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+  TY+ LI G  +N  L  +  L+  ML+ G+ P+   Y  L+   F+    ++ + 
Sbjct: 556 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 615

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M+   +      + I+++ L  +   + A R+  G++K+G VP++  Y+ LI GLC
Sbjct: 616 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 675

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K      A  IL E+   G  PN + Y  ++    ++        + +++  KG   +  
Sbjct: 676 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 735

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y ++I    K+G +  A     +M+  G+  D   Y+ L       G LE A  L++EM
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G      +   L+DG CK G ++     L  +   G   N      I+  L + GK+
Sbjct: 796 FLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854

Query: 374 DHAINVFESMEVKDSFT----YSSMVHNLCKAKRLP 405
                +F  ++ K S +    +SS+  ++    ++P
Sbjct: 855 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 890



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 178/427 (41%), Gaps = 54/427 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  R+E++          G+LP+  TY+ LI  Y +    ++   ++ RM +
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ V Y  L+    ++  +         ML+ G+  D   Y  L+H L   G  + 
Sbjct: 588 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 647

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV   +      P    ++ +++GLCK    + A  +   + K G  P +V YN LI 
Sbjct: 648 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 707

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+G +  AR +   +   G  PN +TYT+++    +         + + M   G T 
Sbjct: 708 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 767

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  +       G L++A   +E+M   G    I S+N L++ +CK GK++    LL
Sbjct: 768 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLL 826

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIK----------------GAR----LHLEYMN- 349
             +  +G   +  T   +I GL +AG +                  AR    L ++ +N 
Sbjct: 827 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 886

Query: 350 -KIGFD------------SNLE-------------------AYNCIVDRLGKDGKIDHAI 377
            KI  D             NL+                   +Y  IVD L + GK+  A+
Sbjct: 887 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 946

Query: 378 NVFESME 384
           N+ + M+
Sbjct: 947 NLLKEMD 953



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 158/349 (45%), Gaps = 18/349 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R+  I +     +  +E A  ++    + G +PDV  Y+ LI   C+    +  + I
Sbjct: 627 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 686

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M + G+ P++V YN+LI G  ++  +S + ++ + +L  G+ P+  +Y SL+    +
Sbjct: 687 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 746

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G    A  ++ +M+   +TP    ++++  G       + A+ +   +   G    + +
Sbjct: 747 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISS 805

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N L+ G CK G+++    +L  +   G  PNA+T   I+       K      I   ++
Sbjct: 806 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 865

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +K        + ++    +  G+               + LD+V  + +I  +CKEG L+
Sbjct: 866 QKTSESAARHFSSLFMDMINQGK---------------IPLDVV--DDMIRDHCKEGNLD 908

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            A +L D +  +       ++  ++D LC+ G +  A   L+ M+K G 
Sbjct: 909 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGI 957



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 4/274 (1%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++L+    K+GR++ A  ++  + D G AP+      ++K   R     L  ++   M  
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + D + Y T+I A+ K+     A   + +M   G  L+ V+YN LI   C+ G +E 
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+    +ME  G   D +T+  LI+GLCK+     A+  L+ M+      N+  Y  ++D
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 366 RLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              ++G  D A  + + M       +  TY ++V  LCK  ++  AS LL   ++   R 
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                  +++G      +++A ++ S++  A IS
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 451



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 41/313 (13%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           A  +++++   K+    +A  +   ++  G  P +   N L+K L +A  +    W ++E
Sbjct: 175 AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAM-ALLWKVRE 233

Query: 208 -LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +  +G +P+  TY+T+++   + R++    ++L  M+ +G   +   Y  +IA   + G
Sbjct: 234 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 293

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK--------------------------- 299
            ++EA  + + M   G+  D  +Y  LIN  CK                           
Sbjct: 294 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 353

Query: 300 --------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
                   EG  + A+ ++ EM   G + +K T+  L+ GLCK G +  A L L+ M + 
Sbjct: 354 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 413

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
               +   YN I++   +      A  +   ME      + +TYS M+H LC++     A
Sbjct: 414 SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 473

Query: 408 SKLLLSCLKSGVR 420
           S LL      G++
Sbjct: 474 SDLLEEMTTKGLK 486


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 221/481 (45%), Gaps = 77/481 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   ++KAE+I+   +  G+ PD+ TY+++ID  C+  + D    +L +M E
Sbjct: 229 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 288

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ +TYNSLI G + + + + S+ +  +M   G+ P V + NS +H LF+ G+ +E
Sbjct: 289 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 348

Query: 131 ANRVFQDMICGDLTP------------CTAT----------FNIMLN-GLCKNRYT---- 163
           A  +F  M+     P             TAT          FN+ML  G+  N++     
Sbjct: 349 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 408

Query: 164 ----------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
                     D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL  A      + D G 
Sbjct: 409 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 468

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CTVIAAFVKIGRLKEAT 272
            P+   Y  +++ C  + +     E++S M  K     G  Y  ++I    K GR+ E  
Sbjct: 469 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 528

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D M+ MV  G + ++V++N+L+  YC  G +E A+ LLD M   G E + Y +  L+DG 
Sbjct: 529 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 588

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C                                   K+G+ID A+ VF  M  K     S
Sbjct: 589 C-----------------------------------KNGRIDDALTVFRDMLHKGVKPTS 613

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             YS ++H L +A+R  +A K+    ++SG  +       V+ GL  + C  EA  +  K
Sbjct: 614 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 673

Query: 449 I 449
           +
Sbjct: 674 L 674



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 8/388 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + TYN+LID Y +    D G  I+ R+ + G+ PD  +Y SLI G  ++  +  +  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM+E G+ P +   NS++  L ++ + D+A  + Q M+   + P   T++++++GLCK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           ++  D A R+   + + G  P  +TYN LI G   +G    +  + K++   G  P    
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR--LKEATDYMEQ 277
             + +   F++ +      I  +M  KG   D   Y T++  +       L +  +    
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+T G+  +   +N LIN Y + G ++ A L+ ++M+ +G   D  T   +I  LC+ G 
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YS 392
           +  A     +M  IG   +   Y C++      G++  A  +   M  KD        +S
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           S+++NLCK  R+     ++   +++G R
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQR 540



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 403 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 462

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ L + G
Sbjct: 463 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 522

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + A  +   +   G  P    Y 
Sbjct: 523 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 582

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+  A  + +++   G  P ++ Y+ I+   F+ R+     ++   M   
Sbjct: 583 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 642

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  V+    +     EA   +E++    V+ DI+++N +I+   K G+ + A
Sbjct: 643 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 702

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L D +   G   +  T++++I  L K  + + A      + K G  S+    N IV  
Sbjct: 703 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 762

Query: 367 LGKDGKIDHAIN 378
           L    ++  A N
Sbjct: 763 LLNKAEVAKASN 774



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 148/294 (50%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  R+ + + I+   ++ G  P+VVT+N L++ YC   + +  + +L+ M   GI
Sbjct: 515 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 574

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+   Y +L+ G  +N  +  +L +  +ML  G+ P    Y+ ++H LFQ  +   A +
Sbjct: 575 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 634

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F +MI    T    T+ ++L GLC+N  TD A  +   L       +++T+NI+I  + 
Sbjct: 635 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 694

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A+ +   +   G  PN  TY+ ++    +   Y+    +  ++++ G+  D  
Sbjct: 695 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 754

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
               ++   +    + +A++Y+  +  + + L+  + + L +L+ +EG ++  +
Sbjct: 755 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLF 808



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 5/380 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+LI+AY +    D    I   M+  G+ PD VT+ ++I+   R   L  +
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLN 155
           L   + M+++G+PP    Y  L+      G+  +A  +  +M+  D+ P     F+ ++N
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 516

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK         +   + + G  P +VT+N L++G C  G +  A  +L  +   G  P
Sbjct: 517 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 576

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y T++    +N +    L +   M  KG       Y  ++    +  R   A    
Sbjct: 577 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 636

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A +LL+++     + D  T  I+I  + K 
Sbjct: 637 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 696

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G  + A+   + ++  G   N++ Y+ ++  L K+   + A N+F S+E      DS   
Sbjct: 697 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 756

Query: 392 SSMVHNLCKAKRLPSASKLL 411
           + +V  L     +  AS  L
Sbjct: 757 NHIVRMLLNKAEVAKASNYL 776



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 167/347 (48%), Gaps = 7/347 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP + +YN L+ C  ++ +PD    +   ++   L P   +++++  G  K+   D A  
Sbjct: 153 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY-GFVKDGEVDKAHC 211

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  + + G +P+++  N +IK LCK   +  A  I++++ DSG AP+  TY+ I+    
Sbjct: 212 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 271

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +++       +L  M   G   +   Y ++I  +   G   E+    +QM + GV   + 
Sbjct: 272 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 331

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LE 346
           + N+ I+   K G+   A  + D M  +G + D  +++ ++ G   A +   A +H    
Sbjct: 332 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 391

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M   G   N   +N +++   + G +D A+ +FE M+    + D+ T+++++ +LC+  
Sbjct: 392 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           RL  A       +  GV   ++    ++ G  + G   +AK++ S++
Sbjct: 452 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 498



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/208 (17%), Positives = 81/208 (38%), Gaps = 35/208 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ L +I +    +A R   A+ +  + I  G    + TY +++   C+    D    
Sbjct: 610 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 669

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L ++    +  D++T+N +I+                                    +F
Sbjct: 670 LLEKLFAMNVKFDIITFNIVISA-----------------------------------MF 694

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+  EA  +F  +    L P   T+++M+  L K    + A  +F  ++K G   +  
Sbjct: 695 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 754

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDS 211
             N +++ L     +  A   L  +G++
Sbjct: 755 LLNHIVRMLLNKAEVAKASNYLSIIGEN 782


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 226/437 (51%), Gaps = 8/437 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +  FC+  +L  A + +   ++LG  PD V +N L++  C          +++RM 
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  P ++T N+L+ G   N  +S ++ L+D M+E G  P+  +Y  +++ + + G+  
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M   ++      ++I+++GLCK+   DNA  +F  ++  GF  +++TYN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C AGR      +L+++     +PN +T++ ++    +  K +   ++L  M ++G  
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y ++I  F K  RL+EA   ++ M++ G   DI+++N LIN YCK  +++    L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM  +G   +  T+  L+ G C++G ++ A+   + M       ++ +Y  ++D L  
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+++ A+ +F  +E      D   Y  ++H +C A ++  A  L  S    GV++   A
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545

Query: 426 QKAVVDGLRHSGCRREA 442
              ++  L    CR+++
Sbjct: 546 YNIMISEL----CRKDS 558



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 211/427 (49%), Gaps = 4/427 (0%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I+   LP V+ +N L  A  +   ++    +  +M   GI+  + T + +I    R  
Sbjct: 78  DMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCR 137

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            LS +   + +++++G  PD   +N+L++ L    +  EA  +   M+     P   T N
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            ++NGLC N    +A+ +   + + GF P  VTY  ++  +CK+G+   A  +L+++ + 
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               +A+ Y+ I+    ++        + + M+ KG+  D   Y T+I  F   GR  + 
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +  M+   +  ++V+++ LI+ + KEGKL  A  LL EM ++G   +  T+  LIDG
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            CK   ++ A   ++ M   G D ++  +N +++   K  +ID  + +F  M ++    +
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + TY+++V   C++ +L  A KL    +   VR    + K ++DGL  +G   +A +I  
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497

Query: 448 KIRMAKI 454
           KI  +K+
Sbjct: 498 KIEKSKM 504



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 184/373 (49%), Gaps = 1/373 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     +I +   CK   L+ A  +  +    G   D++TYN LI  +C    +D G  
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M +  ISP+VVT++ LI    +   L  +  LL EM++ GI P+  +YNSL+    
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + +EA ++   MI     P   TFNI++NG CK    D+ L +FR +   G +   V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN L++G C++G+L  A+ + +E+      P+ ++Y  ++     N + +  LEI   +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D   Y  +I       ++ +A D    +   GV+LD  +YN +I+  C++  L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A +L  +M ++G   D+ T+ ILI       +   A   +E M   GF +++     +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619

Query: 364 VDRLGKDGKIDHA 376
           ++ L   G++D +
Sbjct: 620 INMLSS-GELDKS 631



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 39/397 (9%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D V Y+++ID  C+  S D  + + N M   G   D++TYN+LI G            LL
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M++  I P+V +++ L+    + GK  EA+++ ++M+   + P T T+N +++G CK 
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              + A++M   +   G  P+++T+NILI G CKA R+     + +E+   G   N +TY
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+++                            G+C       + G+L+ A    ++MV+
Sbjct: 442 NTLVQ----------------------------GFC-------QSGKLEVAKKLFQEMVS 466

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
             V+ DIVSY  L++  C  G+LE A  +  ++EK   E D   + I+I G+C A  +  
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
           A      +   G   +  AYN ++  L +   +  A  +F  M       D  TY+ ++ 
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
                    +A++L+     SG     S  K V++ L
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 4/286 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A+ +FR + +   +P ++ +N L   + K  +      + K++   G A +  T + +
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + C  R RK       +  + + GY  D   + T++       R+ EA + +++MV  G 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +  +++ NTL+N  C  GK+  A +L+D M + GF+ ++ T+  +++ +CK+G    A  
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L  M +     +   Y+ I+D L KDG +D+A N+F  ME+K    D  TY++++   C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            A R    +KLL   +K  +         ++D     G  REA ++
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ +++  A A++   ++LG  P +VT + L++ YC          ++++M E
Sbjct: 49  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD +T+ +LI G   ++  S ++ L+D M++ G  P++ +Y  +++ L + G  D 
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      FN +++ LCK R+ D+AL +F+ ++  G  P +VTY+ LI 
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T+  ++    +  K+    ++   M ++    
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL +A    E MV+     D+ +YNTLI  +CK  ++E    L 
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   D  T+T LI GL   G+   A+   + M   G   ++  Y+ ++D L  +
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408

Query: 371 GKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VF+ M   E+K D + Y++M+  +CKA ++     L  S    GV+      
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ GL      +EA  +  K++
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMK 492



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 187/368 (50%), Gaps = 1/368 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +     +L+ M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P++VT+N+LI    +      +  L D+M++  I PD+++YNSL++      + 
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A ++F+ M+  D  P   T+N ++ G CK++  ++   +FR +   G V + VTY  L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+GL   G    A+ + K++   G  P+ +TY+ ++     N K +  LE+   M++   
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y T+I    K G++ +  D    +   GV+ ++V+YNT+I+  C +  L+ AY 
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL +M++ G   D  T+  LI    + G+   +   +  M    F  +      + + L 
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 545

Query: 369 KDGKIDHA 376
            DG++D +
Sbjct: 546 HDGRLDKS 553



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 181/379 (47%), Gaps = 46/379 (12%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L K EA  I+        DVV +N +ID+ C++   D    +   M   GI P+VVTY
Sbjct: 171 NLLNKMEAAKIEA-------DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           +SLI+        S +  LL +M+E  I P++ ++N+L+    + GK  EA ++  DMI 
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   T+N ++NG C +   D A +MF  +      P+L TYN LIKG CK+ R+  
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              + +E+   G   + +TYTT+++  F +                              
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHD------------------------------ 373

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                G    A    +QMV+DGV  DI++Y+ L++  C  GKLE A  + D M+K   + 
Sbjct: 374 -----GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D Y +T +I+G+CKAG +         ++  G   N+  YN ++  L     +  A  + 
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488

Query: 381 ESME----VKDSFTYSSMV 395
           + M+    + DS TY++++
Sbjct: 489 KKMKEDGPLPDSGTYNTLI 507



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 204/420 (48%), Gaps = 4/420 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +  +N L+ A  +   FD   ++  +M+  GIS ++ TYN LI    R S +S +L 
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M+++G  P + + +SL++      +  +A  +   M+     P T TF  +++GL 
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            +     A+ +   + + G  P LVTY +++ GLCK G +  A  +L ++  +    + +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            + TI+    + R     L +   M+ KG   +   Y ++I+     GR  +A+  +  M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   +  ++V++N LI+ + KEGK   A  L D+M K+  + D +T+  LI+G C    +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A+   E+M       +L+ YN ++    K  +++    +F  M     V D+ TY+++
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +  L       +A K+    +  GV         ++DGL ++G   +A ++   ++ ++I
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 109/231 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ R+E    +  +    G++ D VTY  LI         D    +  +M  
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G   N  L  +L++ D M +  I  D++ Y +++  + + GK D+
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P   T+N M++GLC  R    A  + + +++ G +P+  TYN LI+
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  +++E+       +A T   +       R  K  L++LS
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 559



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 4/245 (1%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+   +  ++    + +K+ L + +   M+R G + + + Y  +I  F +  ++  A   
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M+  G +  IV+ ++L+N YC   ++  A  L+D+M + G+  D  T T LI GL  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
                 A   ++ M + G   NL  Y  +V+ L K G ID A N+   ME      D   
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++++ +LCK + +  A  L       G+R       +++  L   G   +A ++ S + 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 451 MAKIS 455
             KI+
Sbjct: 248 EKKIN 252


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ +++  A A++   ++LG  P +VT + L++ YC          ++++M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD +T+ +LI G   ++  S ++ L+D M++ G  P++ +Y  +++ L + G  D 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      ++ +++ LCK R+ D+AL +F  ++  G  P ++TY+ LI 
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC   R   A  +L ++ +    PN +T+  ++    +  K     ++   M ++    
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL EA    E M++     ++V+YNTLIN +CK  +++    L 
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+T LI G  +A +   A++  + M   G   N+  YN ++D L K+
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++        +TY+ M+  +CKA ++     L  S    GV+      
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G + EA  +  K+R
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMR 567



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 214/437 (48%), Gaps = 4/437 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L+ A  +    ++   LP +  +N L+ A  +   FD   ++  +M+  GIS ++ TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI    R S +S +L LL +M+++G  P + + +SL++      +  +A  +   M+  
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P T TF  +++GL  +     A+ +   + + G  P LVTY +++ GLCK G +  A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L ++  +    N + Y+T++    + R     L + + M+ KG   +   Y ++I+ 
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
                R  +A+  +  M+   +  ++V++N LI+ + KEGKL  A  L DEM K+  + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T++ LI+G C    +  A+   E M       N+  YN +++   K  +ID  + +F 
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M     V ++ TY++++H   +A+   +A  +    +  GV         ++DGL  +G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484

Query: 438 CRREAKKIQSKIRMAKI 454
              +A  +   ++ +K+
Sbjct: 485 KLEKAMVVFEYLQRSKM 501



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 157/302 (51%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK    + A  +  +    GV P+V+TY+ LI   C +  +     +L+ M E  I+P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVT+N+LI    +   L  +  L DEM++  I PD+++Y+SL++      + DEA  +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + MI  D  P   T+N ++NG CK +  D  + +FR + + G V   VTY  LI G  +A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A+ + K++   G  PN +TY T++    +N K +  + +   ++R       + Y
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    K G++++  D    +   GV+ D++ YNT+I+ +C++G  E A  L  +M +
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568

Query: 316 QG 317
            G
Sbjct: 569 DG 570



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 108/203 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  +RL++A+ +    I     P+VVTYN LI+ +C+    D G  +   M + G+  +
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY +LI G  +      +  +  +M+  G+ P++ +YN+L+  L + GK ++A  VF+
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    + P   T+NIM+ G+CK    ++   +F  L   G  P+++ YN +I G C+ G
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554

Query: 197 RLRTARWILKELGDSGHAPNAIT 219
               A  + +++ + G  P++ T
Sbjct: 555 LKEEADALFRKMREDGPLPDSGT 577



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 89/171 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+++   +  +  + G++ + VTY  LI  + Q    D    +  +M  
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+++TYN+L+ G  +N  L  ++ + + +    + P +++YN ++  + + GK ++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
              +F  +    + P    +N M++G C+    + A  +FR +++ G +P+
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 217/436 (49%), Gaps = 6/436 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   ++ A+ I+ DG   G +PD  TY  LI+  CQ    D    + N   E G+ P+
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPN 389

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V  N+L+ G ++  L+  +L L++EM E G  PD+W+YN +++ L ++G   +A+ +  
Sbjct: 390 LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D I     P   TFN +++G CK    DNA+ +   +  HG  P+++TYN ++ GLCKAG
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +        K + + G  PN ITY  + +   + RK +  L ++  M+ KG T D   + 
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFG 569

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLD--IVSYNTLINLYCKEGKLEAAYLLLDEME 314
           T++  F   G L  A    ++ V +  +    I +YN +IN +  +  +  A  L ++M 
Sbjct: 570 TLMKGFCDNGDLDGAYQLFKR-VDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + GF  D YT+ ++IDG CK GNI      L    + G   +L  +  +++ L    ++ 
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKA-KRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            A+ +   M  K       +V+ + +A K+  +A K+++  L     I   A + + DG+
Sbjct: 689 EAVGIIHLMVHKG--IVPEVVNTIFEADKKEVAAPKIVVENLMKKGHITYFAYEILHDGI 746

Query: 434 RHSGCRREAKKIQSKI 449
           R     R+      K+
Sbjct: 747 RDKKLSRKKLPTSQKV 762



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 198/415 (47%), Gaps = 6/415 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +NI +  FC+   L +A   ++DG+  G+ PDV+TYN LI   C+          L +M 
Sbjct: 254 VNIFIQGFCQRAMLNEA-IRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD  TYNS+I G  +  ++  +  +L +    G  PD  +Y SL++ L Q G  D
Sbjct: 313 NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  VF + +   L P     N ++ GL +      AL++   + ++G  P++ TYN++I
Sbjct: 373 RAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVI 432

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G +  A  ++ +    GH P+  T+ T++    +  K    +EI+  M   G +
Sbjct: 433 NGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS 492

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y +++    K G+ ++     + M+  G   +I++YN L   +CK  K+E A  L
Sbjct: 493 PDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNL 552

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           ++EM+ +G   D      L+ G C  G++ GA +L      +  F   +  YN +++   
Sbjct: 553 IEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFA 612

Query: 369 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               ++ A  +F  M       DS+TY  M+   CK   + S    LL  ++ G+
Sbjct: 613 GKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 198/372 (53%), Gaps = 7/372 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++PDV T+ + + ++C+     A   +LN M   G     V Y ++I G    +    +
Sbjct: 141 GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEA 200

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L +EML +GI PD+ ++N L+H L + G   E+ R+   ++   ++P   T NI + G
Sbjct: 201 HELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQG 260

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+    + A+R+  G+ + G  P+++TYN LI GLCK  ++  A   L+++ + G+ P+
Sbjct: 261 FCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPD 319

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY +I+    +    +   +IL     KG+  D   YC++I    + G +  A +   
Sbjct: 320 GFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFN 379

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + +  G++ ++V  NTL+    ++G +  A  L++EM + G   D +T+ ++I+GLCK G
Sbjct: 380 EAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIG 439

Query: 337 NIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            +  A  L ++ + K G   ++  +N ++D   K  K+D+AI + + M       D  TY
Sbjct: 440 CVSDADNLVIDAIAK-GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITY 498

Query: 392 SSMVHNLCKAKR 403
           +S+++ LCKA +
Sbjct: 499 NSILNGLCKAGK 510



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 200/399 (50%), Gaps = 5/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F + N   +A  +  + + LG+ PD++ +N LI   C+         +LN++ + G+SP+
Sbjct: 191 FYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + T N  I G  + ++L+ ++ LLD  +  G+ PDV +YN+L+  L +  K  EA    +
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   T+N +++G CK     NA ++ R     GFVP+  TY  LI GLC+ G
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDG 369

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +  E  + G  PN +   T++K   +       L++++ M   G + D + Y 
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI    KIG + +A + +   +  G   D+ ++NTLI+ YCK+ KL+ A  ++D M   
Sbjct: 430 LVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNH 489

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  +++GLCKAG  +      + M + G   N+  YN + +   K  K++ A
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +N+ E M+ K    D   + +++   C    L  A +L 
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 172/388 (44%), Gaps = 10/388 (2%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM---LEMGIPPDVWSYNSLMHCLFQL 125
           +E G    ++TY  +I     +       ++L E    ++ G+   V  Y   M    + 
Sbjct: 32  KEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--YIGAMRNYGRK 89

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA  VF+ M   +  P   ++N ++N L + RY D A +++  ++  G VP++ T+
Sbjct: 90  GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I +K  C+  R   AR +L  +   G   +A+ Y T++   +         E+   M  
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   +  +I    + G ++E+   + +++  GV  ++ + N  I  +C+   L  
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE 269

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LLD + + G   D  T+  LI GLCK   +  A  +L  M   G++ +   YN I+D
Sbjct: 270 AIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K G + +A  +      K    D  TY S+++ LC+   +  A  +    ++ G++ 
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                  +V GL   G   +A K+ +++
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEM 416


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 228/452 (50%), Gaps = 12/452 (2%)

Query: 14  VCTF-----CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            CTF      KAN LEK+   + + +R GV PDV  ++  I+A+C+    +    +   M
Sbjct: 214 TCTFLLSSLVKANELEKS-YWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 272

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+SP+VVTYN+LI G  ++  L  +    ++M++ G+   + +Y+ L++ L +L K 
Sbjct: 273 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 332

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EAN V ++ +    TP    +N +++G CK     +ALR+   +   G  P  VT N +
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+G CK G++  A  IL+E+   G + N   +TTI+     N +++  L  L  M  +  
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +     T++    K G+  +A +   +++  G   ++V+ N LI+  CK G ++ A  
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           LL +M ++GF  DK T+  LI G CK G + +G +L  E M K G + +   YN ++  +
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE-MVKQGIEPDTFTYNLLIHGM 571

Query: 368 GKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            + GK+D A+N++   + +D     +TY  M+   CKA ++    KL    L   + +  
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                ++     +G   EA K+   +R   I 
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663



 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 218/466 (46%), Gaps = 39/466 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  +  +A +++ + +  G  P+ V YN LID YC+  +      I   M   GI+P+ V
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T NS+I G  +   +  +  +L+EML  G   +  ++ +++H L    + + A R  ++M
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +  ++ P       ++ GLCK     +A+ ++  L + GF   LVT N LI GLCK G +
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  +LK++ + G   + ITY T++  C +  K + G ++   M ++G   D F Y  +
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567

Query: 259 IAAFVKIGRLKEAT----------------------------DYME-------QMVTDGV 283
           I    +IG+L EA                             D +E       +++T  +
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +L+ V YNTLI  YC+ G    A+ L D+M  +G      T++ LI G+C  G ++ A+ 
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLC 399
            ++ M K G   N+  Y  ++    K G++D  +NV + M   D      TY+ M+    
Sbjct: 688 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 747

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K+  + +A+KLL   +  G+         + +G    G   E  KI
Sbjct: 748 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 211/446 (47%), Gaps = 4/446 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L +  +  FCK  ++E A  +  D  +LGV P+VVTYN LI   C+  + D  +    +M
Sbjct: 248 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G++  ++TY+ LI G  +    + +  +L E LE G  P+   YN+L+    ++G  
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A R+  DM+   + P + T N ++ G CK    + A  +   +   GF      +  +
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC   R  +A   L+E+      PN    TT++    +  K+   +E+   +  KG+
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +      +I    K G ++EA   +++M+  G  LD ++YNTLI+  CKEGK+E  + 
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM KQG E D +T+ +LI G+C+ G +  A              N+  Y  ++D   
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  KI+    +F  +  +    +S  Y++++   C+      A KL       G+    +
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
              +++ G+ + G   +AK +  ++R
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMR 693



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 190/392 (48%), Gaps = 4/392 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  +R E A   + + +   + P+      L+   C+         +  R+ E G   +
Sbjct: 431 LCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 490

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VT N+LI G  +   +  ++ LL +MLE G   D  +YN+L+    + GK +E  ++  
Sbjct: 491 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 550

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P T T+N++++G+C+    D A+ ++   +    VP + TY ++I G CKA 
Sbjct: 551 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 610

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++     +  EL       N++ Y T+++   RN       ++   M+ KG       Y 
Sbjct: 611 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 670

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I     IGR+++A   +++M  +G+  ++V Y  LI  YCK G+++    +L EM   
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +K T+T++IDG  K+G++K A   L  M   G   +   YN + +   K+GKI+  
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 790

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRL 404
             + + M  +    D  TY+++VH   +   L
Sbjct: 791 FKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 160/321 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   +++A  ++   +  G + D +TYN LI   C+    + G+ +   M +
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD  TYN LI G  R   L  +++L +E     + P+V++Y  ++    +  K +E
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++F +++  +L   +  +N ++   C+N  T  A ++   ++  G  P   TY+ LI 
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G+C  GR+  A+ ++ E+   G  PN + YT ++    +  +    + +L  M       
Sbjct: 675 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHP 734

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I  + K G +K A   + +MV  G+  D V+YN L N +CKEGK+E  + + 
Sbjct: 735 NKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKIC 794

Query: 311 DEMEKQGFECDKYTHTILIDG 331
           D M ++G   D+ T+T L+ G
Sbjct: 795 DYMSQEGLPLDEITYTTLVHG 815



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 7/290 (2%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           NA+ +FR L   G  P + T   L+  L KA  L  + W+ + +   G +P+   ++T +
Sbjct: 195 NAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAI 253

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  K +  +++   M++ G + +   Y  +I    K G L EA  + E+MV DGV 
Sbjct: 254 NAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVN 313

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RL 343
             +++Y+ LIN   K  K   A  +L E  ++GF  ++  +  LIDG CK GN+  A R+
Sbjct: 314 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 373

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
             + ++K G + N    N I+    K G+++ A  + E M  +    +   +++++H LC
Sbjct: 374 RGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 432

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              R  SA + L   L   +R        +V GL   G   +A ++  ++
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 46/78 (58%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K+  ++ A  ++ + +  G++PD VTYN+L + +C+    + G+ I + M + G+  D
Sbjct: 746 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLD 805

Query: 77  VVTYNSLIAGATRNSLLS 94
            +TY +L+ G  + S L+
Sbjct: 806 EITYTTLVHGWQQPSALT 823


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 228/452 (50%), Gaps = 12/452 (2%)

Query: 14  VCTF-----CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            CTF      KAN LEK+   + + +R GV PDV  ++  I+A+C+    +    +   M
Sbjct: 281 TCTFLLSSLVKANELEKS-YWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 339

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+SP+VVTYN+LI G  ++  L  +    ++M++ G+   + +Y+ L++ L +L K 
Sbjct: 340 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 399

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EAN V ++ +    TP    +N +++G CK     +ALR+   +   G  P  VT N +
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+G CK G++  A  IL+E+   G + N   +TTI+     N +++  L  L  M  +  
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +     T++    K G+  +A +   +++  G   ++V+ N LI+  CK G ++ A  
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           LL +M ++GF  DK T+  LI G CK G + +G +L  E M K G + +   YN ++  +
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE-MVKQGIEPDTFTYNLLIHGM 638

Query: 368 GKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            + GK+D A+N++   + +D     +TY  M+   CKA ++    KL    L   + +  
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                ++     +G   EA K+   +R   I 
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 217/464 (46%), Gaps = 39/464 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  +  +A +++ + +  G  P+ V YN LID YC+  +      I   M   GI+P+ V
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T NS+I G  +   +  +  +L+EML  G   +  ++ +++H L    + + A R  ++M
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 514

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +  ++ P       ++ GLCK     +A+ ++  L + GF   LVT N LI GLCK G +
Sbjct: 515 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  +LK++ + G   + ITY T++  C +  K + G ++   M ++G   D F Y  +
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634

Query: 259 IAAFVKIGRLKEAT----------------------------DYME-------QMVTDGV 283
           I    +IG+L EA                             D +E       +++T  +
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +L+ V YNTLI  YC+ G    A+ L D+M  +G      T++ LI G+C  G ++ A+ 
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLC 399
            ++ M K G   N+  Y  ++    K G++D  +NV + M   D      TY+ M+    
Sbjct: 755 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 814

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           K+  + +A+KLL   +  G+         + +G    G   E K
Sbjct: 815 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGK 858



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 211/446 (47%), Gaps = 4/446 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L +  +  FCK  ++E A  +  D  +LGV P+VVTYN LI   C+  + D  +    +M
Sbjct: 315 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 374

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G++  ++TY+ LI G  +    + +  +L E LE G  P+   YN+L+    ++G  
Sbjct: 375 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A R+  DM+   + P + T N ++ G CK    + A  +   +   GF      +  +
Sbjct: 435 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 494

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC   R  +A   L+E+      PN    TT++    +  K+   +E+   +  KG+
Sbjct: 495 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 554

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +      +I    K G ++EA   +++M+  G  LD ++YNTLI+  CKEGK+E  + 
Sbjct: 555 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 614

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM KQG E D +T+ +LI G+C+ G +  A              N+  Y  ++D   
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  KI+    +F  +  +    +S  Y++++   C+      A KL       G+    +
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
              +++ G+ + G   +AK +  ++R
Sbjct: 735 TYSSLIHGMCNIGRMEDAKCLIDEMR 760



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 176/363 (48%), Gaps = 6/363 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LL   V   CK  +   A  +    +  G   ++VT N LI   C+  +      +L +M
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G   D +TYN+LI+G  +   +     L  EM++ GI PD ++YN L+H + ++GK 
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  ++ +    DL P   T+ +M++G CK    +   ++F  L         V YN L
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+  C+ G    A  +  ++   G  P   TY++++       + +    ++  M+++G 
Sbjct: 705 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 764

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  + K+G++ +  + +++M +  +  + ++Y  +I+ Y K G ++ A  
Sbjct: 765 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL----EAYNCIV 364
           LL EM  +G   D  T+ +L +G CK G I+  +L  E  + +GF+S L    EA+    
Sbjct: 825 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE--DGVGFNSPLFLIHEAFRACT 882

Query: 365 DRL 367
            R+
Sbjct: 883 RRV 885



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 176/360 (48%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  +R E A   + + +   + P+      L+   C+         +  R+ E G   +
Sbjct: 498 LCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 557

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VT N+LI G  +   +  ++ LL +MLE G   D  +YN+L+    + GK +E  ++  
Sbjct: 558 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 617

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P T T+N++++G+C+    D A+ ++   +    VP + TY ++I G CKA 
Sbjct: 618 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 677

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++     +  EL       N++ Y T+++   RN       ++   M+ KG       Y 
Sbjct: 678 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I     IGR+++A   +++M  +G+  ++V Y  LI  YCK G+++    +L EM   
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +K T+T++IDG  K+G++K A   L  M   G   +   YN + +   K+GKI+  
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 7/290 (2%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           NA+ +FR L   G  P + T   L+  L KA  L  + W+ + +   G +P+   ++T +
Sbjct: 262 NAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAI 320

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  K +  +++   M++ G + +   Y  +I    K G L EA  + E+MV DGV 
Sbjct: 321 NAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVN 380

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RL 343
             +++Y+ LIN   K  K   A  +L E  ++GF  ++  +  LIDG CK GN+  A R+
Sbjct: 381 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 440

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
             + ++K G + N    N I+    K G+++ A  + E M  +    +   +++++H LC
Sbjct: 441 RGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 499

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              R  SA + L   L   +R        +V GL   G   +A ++  ++
Sbjct: 500 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 549


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 222/443 (50%), Gaps = 3/443 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V    K+  +  A  ++   I  G+ PDV+T+N ++D  C+       + +  R  E
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVTY++LI G ++ + +  +L LL +M+E+G   +  +Y++++  L ++G+ ++
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V + M      P   T+N +++G  K +    A+ + R + + GF P +VTY  L  
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC++GR   A  IL  +   G APNAITY++I+    +  +    L     M R     
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716

Query: 251 DG-FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  +I    K GR+ EA +++E+M+  G   D+V+++ LIN  C  G+++    L
Sbjct: 717 PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 776

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M ++G + D Y +  +I+  C  G    A   LE M   G   N   +  ++  L  
Sbjct: 777 FCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCG 836

Query: 370 DGKIDHAINVFESM--EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           + +ID A++ F S+  + +D  +Y++++ +L  ++R   A +LL + +  G         
Sbjct: 837 NDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYM 896

Query: 428 AVVDGLRHSGCRREAKKIQSKIR 450
            V+DGL  +G    A K+  ++R
Sbjct: 897 TVMDGLFKAGSPEVAAKLLQEMR 919



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 209/430 (48%), Gaps = 28/430 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISP 75
            C+A R+++A  +       G   DV+TYN+L+   C+       Y  +  MR   G SP
Sbjct: 320 LCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSP 379

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           +VVT+++LI G      ++ + ++ + M+ + GI P+ ++Y  L+  L + G      + 
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439

Query: 135 FQDMICGDLT---------------------PCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           F+ M+  +                       P   T+N ++ GL K+    +AL +   +
Sbjct: 440 FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM 499

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            + G  P+++T+N ++ GLCK  R+  A  + K   + G  PN +TY+T++    +  K 
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKM 559

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L++L+ M   G   +   Y TV+   +K+GR+++A   + QM   G   D V+YNTL
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+ + K  +L  A  LL EM + GF     T+T L  GLC++G    A   L+YM   G 
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSAS 408
             N   Y+ IVD L K G++  A+  FE M            YS+++  LCKA R+  A 
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAY 739

Query: 409 KLLLSCLKSG 418
           + L   +++G
Sbjct: 740 EFLERMIRAG 749



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 208/453 (45%), Gaps = 41/453 (9%)

Query: 19   KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
            K  ++++A  ++   + LG   + VTY+ ++D   +    +    +L +MR+AG  PD V
Sbjct: 555  KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 614

Query: 79   TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            TYN+LI G  +   L  ++ LL EMLE G  P V +Y +L H L + G+ DEA  +   M
Sbjct: 615  TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 674

Query: 139  ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGR 197
                  P   T++ +++GLCK      AL  F  + +   V P ++ Y+ LI GLCKAGR
Sbjct: 675  AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGR 734

Query: 198  LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
            +  A   L+ +  +G  P+ +T++ ++       +   GLE+   M  +G   D + Y  
Sbjct: 735  IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNA 794

Query: 258  VIAAFVKIGRLKEATDYMEQMVTDGVQ--------------------------------- 284
            +I A+   G    A   +E+M T G+                                  
Sbjct: 795  MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854

Query: 285  LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
             D +SYNTLI       + E A  LL  M   G   D   +  ++DGL KAG+ + A   
Sbjct: 855  RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914

Query: 345  LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            L+ M   G   +L  Y  ++  L K  ++  A + FE M  K    D+  YSS++   CK
Sbjct: 915  LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974

Query: 401  AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            A ++  A KLL S   SG+    +    +VD L
Sbjct: 975  ADKVDDAWKLLRS---SGIEPTITMYSTMVDSL 1004



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 192/394 (48%), Gaps = 4/394 (1%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N  +  F K  RL +A  ++ + +  G  P VVTY  L    C+   FD    IL+ M  
Sbjct: 617  NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 676

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPD 129
             G +P+ +TY+S++ G  +   ++ +L   ++M  +  + P V +Y++L+  L + G+ D
Sbjct: 677  RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRID 736

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            EA    + MI     P   TF+I++NGLC     D  L +F G+ + G   ++  YN +I
Sbjct: 737  EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMI 796

Query: 190  KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               C  G    A  +L+E+   G A N +T+  ++K    N +    +    ++      
Sbjct: 797  NAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--C 854

Query: 250  FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
             D   Y T+I + V   R ++A + +  MV DG   D  +Y T+++   K G  E A  L
Sbjct: 855  RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914

Query: 310  LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            L EM  +G   D  T+TI+I GL KA  +  A  + E M +     +   Y+ ++D   K
Sbjct: 915  LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974

Query: 370  DGKIDHAINVFESMEVKDSFT-YSSMVHNLCKAK 402
              K+D A  +  S  ++ + T YS+MV +LCK +
Sbjct: 975  ADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNR 1008



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 196/426 (46%), Gaps = 35/426 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CKA R+  A       I+ G  P VVTY+ +ID  C+    D G  +L  M  
Sbjct: 5   NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ VTYN+L+           +  LL+ M   G PP++ ++  ++  L + G+ + 
Sbjct: 65  RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV  +M+     P      ++L+ LC+    D A   F+ +   GF P+ VTYN ++ 
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAGRL  A  +L+ L +S  +P   T+T  +    +        E   +M + G + 
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYME---------------------QMVTDGVQL---- 285
           +   Y  +I    K G+L  A   +                        + + +QL    
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304

Query: 286 ----DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
               ++V +N+L+N  C+  +++ A+ L D M++ G   D  T+ IL+ GLCK   I  A
Sbjct: 305 PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA 364

Query: 342 RLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMV 395
             H+E M +  G   N+  ++ ++  L   G+++ A  V+E M        + FTY+ ++
Sbjct: 365 YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLL 424

Query: 396 HNLCKA 401
             LCKA
Sbjct: 425 EGLCKA 430



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 10/372 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           +VTYN+LI+  C+       +T   +  + G  P VVTY+++I G  R++ +     LL+
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM   G  P+  +YN+L++ L   G+  EA  + + M      P   TF +++ GLCK  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             + A R+   +   GFVP++  + +L+  LC+ GR+  A +  +++   G  P+A+TY 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++   ++  + +    +L  +     +   F +   +    K G L  A ++ + M   
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV  + V+Y+ LI+  CK GKL+ A  LL +   Q      +  + L+ GLC+A  ++ A
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEA 297

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
              L+ M  +    N+  +N +++ L +  ++D A  +F+ M+      D  TY+ ++  
Sbjct: 298 IQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 398 LCKAKRLPSASK 409
           LCK +R+P A +
Sbjct: 355 LCKLRRIPEAYR 366



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 172/339 (50%), Gaps = 14/339 (4%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN L++ L + G+  +A   F+  I     P   T++ +++GLC++   D   ++   +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P  VTYN L+  L   GR + A  +L+ +  +G  P  IT+  I+K   +  + 
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +    ++  M  +G+  D   +  ++ A  ++GR+ EA  + +Q++  G   D V+YNT+
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++   K G+LEAA ++L  + +       +T TI +DGL KAGN+ GA    + M + G 
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-FTYSSMVHNLCKAKRLPSASKLL- 411
             N   Y+ ++D L K GK+D A+ +      +   F +SS++H LC+A RL  A +LL 
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK 302

Query: 412 -------LSCLKSGVRILKSAQKA-----VVDGLRHSGC 438
                  + C  S +  L  A++      + D ++ SGC
Sbjct: 303 AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGC 341



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 177/372 (47%), Gaps = 12/372 (3%)

Query: 17   FCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
             CKA R+ +A    E +  D +   V P V+ Y+ LID  C+    D  Y  L RM  AG
Sbjct: 693  LCKAGRVTEALGYFEKMARDEV---VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAG 749

Query: 73   ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
              PDVVT++ LI G      +   L+L   M E G   D+++YN++++     G+   A 
Sbjct: 750  RIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAY 809

Query: 133  RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
             + ++M    +   T T  I++  LC N   D A+  F  + +     + ++YN LI  L
Sbjct: 810  ALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSL 867

Query: 193  CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
              + R   A  +L+ +   G +P+A  Y T+M   F+    ++  ++L  M+ +G++ D 
Sbjct: 868  VASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDL 927

Query: 253  FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
              Y  +I+   K  +L  A DY E+M+   ++ D + Y++LI+ +CK  K++ A+ LL  
Sbjct: 928  RTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL-- 985

Query: 313  MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
                G E     ++ ++D LCK      A   +  M     +  +  +  +      +G+
Sbjct: 986  -RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGR 1044

Query: 373  IDHAINVFESME 384
            +D A+ +   ++
Sbjct: 1045 VDEAVKLVNDLQ 1056



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 36/295 (12%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             +I +   C A R++    +       G   D+  YN +I+AYC    F A Y +L  M+
Sbjct: 757  FSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMK 816

Query: 70   EAGISPDVVT---------------------------------YNSLIAGATRNSLLSCS 96
              GI+ + VT                                 YN+LI     +     +
Sbjct: 817  THGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQA 876

Query: 97   LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            L+LL  M+  G  PD  +Y ++M  LF+ G P+ A ++ Q+M     +P   T+ IM++G
Sbjct: 877  LELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISG 936

Query: 157  LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            L K +    A   F  + +    P+ + Y+ LI   CKA ++  A W  K L  SG  P 
Sbjct: 937  LSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA-W--KLLRSSGIEPT 993

Query: 217  AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               Y+T++    +NR     LE++  MK K        + ++  A+V  GR+ EA
Sbjct: 994  ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEA 1048



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)

Query: 8    RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            R   I +    KA +L  A     + +R  + PD + Y+ LIDA+C+    D  + +L  
Sbjct: 928  RTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL-- 985

Query: 68   MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
             R +GI P +  Y++++    +N     +L+++ EM      P +  + SL       G+
Sbjct: 986  -RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGR 1044

Query: 128  PDEANRVFQDM 138
             DEA ++  D+
Sbjct: 1045 VDEAVKLVNDL 1055


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 212/407 (52%), Gaps = 12/407 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            CK  R  +AE ++ D I  G    PD+VTY+ L+  YC+    +    +L  +   G+ 
Sbjct: 55  LCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLR 114

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PD + Y  ++A   +++ L  +L+LL+EM+  G  P + ++N+L+    +    + A+ +
Sbjct: 115 PDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            Q M    +     T+N +++GLCK      A ++   ++  G  P++V Y+  + GLCK
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGF 253
           +G++  A  +L+++ DS H PN +TY TI+    ++ K    LE++  M    G   +  
Sbjct: 235 SGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           GY TV+    K+GR +EA   ME M   G + D+V+Y++L+N  CK GK+E A   + EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-----DSNLEAYNCIVDRLG 368
             +G + +  T+  L+ GLC  G +  A   +E M+  G        ++  YN ++  L 
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K G+ID A+  F+ M  +    D  +YS++V  L ++ R   A  +L
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 225/453 (49%), Gaps = 12/453 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM- 68
            N  V  F K  R    E ++       + P+VV+YN L++  C+   +     ++  M 
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72

Query: 69  -REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            R    +PD+VTY++L++G  +   +  S +LL E++  G+ PD   Y  ++  L +  +
Sbjct: 73  SRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSAR 132

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA  + ++MI     P   TFN +++G C+ +  + A  + + +   G   ++VTYN 
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNT 192

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GLCKAGRL+ A  +L+ +  SG AP+ + Y++ +    ++ K     ++L  M+   
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGKLEAA 306
           +  +   Y T++    K G++  A + MEQM + DG  L++V Y+T+++  CK G+ + A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +++ M + G   D  T++ L++GLCKAG I+ A   +  M   G   N   Y  +V  
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 367 LGKDGKIDHAINVFESMEVKDSF---------TYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           L   G++  A  + E M               TY++++  LCKA R+  A K        
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           G      +   +V+GL  SG   +A+ I S++R
Sbjct: 433 GCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 185/356 (51%), Gaps = 7/356 (1%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   G PP+  ++N+L++   + G+P +  R+ + M   D+ P   ++N +L GLCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 163 TDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              A  + R +   G    P++VTY+ L+ G CKAG++  +R +LKE+   G  P+A+ Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T ++    ++ +    LE+L  M R G       + T+I+   +   L+ A   +++M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            GV+ D+V+YNTL++  CK G+L+ A  LL+ M+  G   D   ++  + GLCK+G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMV 395
           A   LE M     D N+  YN I+D L K GKID A+ + E M   D        YS++V
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             LCK  R   A  ++ +  ++G R       ++V+GL  +G   EA +   ++ M
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 196/385 (50%), Gaps = 7/385 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G  P+ VT+N+L+ G ++         LL+ M    I P+V SYN L+  L +L +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 128 PDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
             EA  + +DMI   G  TP   T++ +L+G CK    + +  + + +   G  P+ + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             ++  LCK+ RL  A  +L+E+  +G  P  IT+ T++  C R +  ++   +L  M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   Y T++    K GRL+EA   +E+M   G   D+V+Y++ +   CK GK+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLEAYNCIV 364
           A+ +L++M     + +  T+  ++DGLCK+G I  A   +E M +  G   N+  Y+ +V
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K G+   A +V E+M       D  TYSS+V+ LCKA ++  A + +      G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
                  ++V GL   G   EA+++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERM 385


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 221/463 (47%), Gaps = 39/463 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +    K  ++ +AE I+    +  + PDV TY  LI  +C+  + D  + + +RM 
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN------------- 116
           + G  P+ VTY++LI G      +  +LD+L+EM+E GI P V++Y              
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320

Query: 117 ----------------------SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
                                 +L+  L +LGK + A  ++  M+   L P T T+N ++
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N LC       AL++F  ++ HG +    TYN +IKGLC  G +  A  + +++   G  
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P  +TY T++              +L  MK  G   D + Y  +++ F K G+L+ A+ Y
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++MV  G+  + VSY  LI+ + K+GK++ A  LL  ME+ G   +  ++  +I+GL K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
                 A    + M + G   N+  Y  ++D L ++G+   A  +F  ME    + + +T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           YSS+++ LC+  +   A  LL    + G+   +    +++DG 
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 219/439 (49%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K   +E A  +    +  G+ P ++T+N LI+   +         IL+++ +
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPDV TY SLI G  RN  L  +  + D M++ G  P+  +Y++L++ L   G+ DE
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++MI   + P   T+ + +  LC   + + A+ +   ++K G  P + TY  LI 
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G+L  A  +  ++   G  PN +TY  ++       ++   L+I   M+  G   
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I      G +++A    E+M+  G    +V+YNTLIN Y  +G +  A  LL
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M++ G E D++T+  L+ G  K G ++ A  + + M + G + N  +Y  ++D   KD
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+D A+++ + ME      +  +Y+++++ L K  R   A K+    ++ G+       
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++DGL  +G  + A KI
Sbjct: 587 TTLIDGLCRNGRTQFAFKI 605



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 172/347 (49%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V TY  LI    +    +    + ++M + G+ P+ VTYN+LI         S +
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +   M   G   +  +YN ++  L   G  ++A  +F+ M+     P   T+N ++NG
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
                  +NA R+   ++++G  P+  TYN L+ G  K G+L +A +  +E+ + G  PN
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++YT ++    ++ K  + L +L  M+  G   +   Y  VI    K  R  EA    +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G+  ++++Y TLI+  C+ G+ + A+ +  +MEK+    + YT++ LI GLC+ G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
               A + L+ M + G   +   +  ++D     G+IDHA  +   M
Sbjct: 633 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 187/378 (49%), Gaps = 4/378 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            LN +   G    + + N+L+    +  ++  + +L  +ML  GI P + ++N+L++ L 
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK  EA  +   +   DL+P   T+  ++ G C+NR  D A  +F  + K G  P  V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI GLC  GR+  A  +L+E+ + G  P   TYT  +         +  +E+++ M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K++G   +   Y  +I+   ++G+L+ A     +M+ +G+  + V+YN LIN  C  G+ 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  +   ME  G   +  T+  +I GLC  G+I+ A +  E M K+G    +  YN +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++     G +++A  + + M+      D +TY+ +V    K  +L SAS      ++ G+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 420 RILKSAQKAVVDGLRHSG 437
                +  A++DG    G
Sbjct: 510 NPNPVSYTALIDGHSKDG 527



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 147/295 (49%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T+  N  +   C    +EKA  +    +++G LP VVTYN LI+ Y    + +    +L
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M+E G  PD  TYN L++G ++   L  +     EM+E G+ P+  SY +L+    + 
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK D A  + + M      P   ++N ++NGL K      A ++   + + G +P ++TY
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI GLC+ GR + A  I  ++      PN  TY++++    +  K      +L  M+R
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 646

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           KG   D   + ++I  FV +GR+  A   + +MV  G + +  +Y+ L+    KE
Sbjct: 647 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D   AP       ++K C    + +   + L+ +   G+ F  +   T++    K   ++
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM+  G+Q  ++++NTLIN+  K+GK+  A L+L ++ +     D +T+T LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
            G C+  N+  A    + M K G D N   Y+ +++ L  +G++D A+++ E M  K   
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              +TY+  +  LC  +    A +L+    K G R       A++ GL   G
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 198/369 (53%), Gaps = 1/369 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +  G  P V  YN+LI+ +C+  S      I N +R+ G+ P  V++N+LI G  ++  L
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                L   M E  I PDV++Y+ L+H L + G+ D A ++F +M    L P   TF  +
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G  ++R  D+A+  +  +   G  P+LV YN L+ GLCK G +  AR ++ E+   G 
Sbjct: 335 IDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGM 394

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ ITYTT++    +    +  +EI   M  +G   D   +  +I+ F + GR+++A  
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAER 454

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            + +MV  G++ D  +Y  +I+ YCK+G ++  + LL EM+  G +    T+ +L++GLC
Sbjct: 455 TLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEVKDSFTYS 392
           K G +K A + LE M  +G   +   YN +++   K+GK +  + +  E   + D   Y+
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIVDYAYYT 574

Query: 393 SMVHNLCKA 401
           S+V    K+
Sbjct: 575 SLVSEYNKS 583



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 169/322 (52%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+LE G PP V  YN L++   + G   +A  +F ++    L P T +FN ++NGLCK+R
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   R+ + ++++   P++ TY++LI GLCK GRL  A  +  E+   G  PN IT+T
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++   +R+R+    +     M   G   D   Y T++    K+G + +A   +++M   
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMV 392

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D ++Y TLI+ YCKEG LE+A  +   M ++G   D    T LI G C+ G ++ A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 397
              L  M + G   +   Y  ++D   K G +     + + M++        TY+ +++ 
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
           LCK  ++ +A+ LL + L  GV
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGV 534



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   + KA  ++ +   +G+ PD +TY  LID YC+    ++   I   M
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+  D V + +LI+G  R+  +  +   L EM+E G+ PD  +Y  ++    + G  
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
               ++ ++M      P   T+N+++NGLCK     NA  +   +   G  P+ +TYNIL
Sbjct: 485 KMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           ++G CK G+   A  +LK   + G   +   YT+++
Sbjct: 545 LEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 97/183 (53%), Gaps = 6/183 (3%)

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           +  +++  G    +  YN LIN +CKEG +  A L+ +E+ K+G      +   LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 334 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           K+ N+ +G RL  + M +     ++  Y+ ++  L K+G++D A  +F+ M+ +    + 
Sbjct: 270 KSRNLDEGFRLK-KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            T+++++    +++R+ SA       L  GV+        +++GL   G   +A+K+  +
Sbjct: 329 ITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 449 IRM 451
           ++M
Sbjct: 389 MKM 391



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +    E+ + GF      + ILI+  CK G+I+ A+L    + K G      ++N +++ 
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K   +D    + ++ME      D FTYS ++H LCK  RL  A +L     + G+R  
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 423 KSAQKAVVDGLRHS 436
                A++DG   S
Sbjct: 328 GITFTALIDGQYRS 341


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 215/431 (49%), Gaps = 7/431 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +N+ V  FCK  R+E A   I +   + G  PD  T+N L++  C+         I++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G  PDV TYNS+I+G  +   +  +++ LD+M+     P+  +YN+L+  L +  + 
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQV 381

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  + + +    + P   TFN ++ GLC  R    A+ +F  ++  G  P+  TYN+L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC  G+L  A  +LK++  SG A + ITY T++    +  K +   EI   M+  G 
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGV 501

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +   Y T+I    K  R+++A+  M+QM+ +G + D  +YN+L+  +C+ G ++ A  
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAAD 561

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           ++  M   G E D  T+  LI GLCKAG ++ A   L  +   G      AYN ++  L 
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLF 621

Query: 369 KDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRIL 422
           +  K   AIN+F  M        D+ +Y  +   LC     +  A   L+  L+ G    
Sbjct: 622 RKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

Query: 423 KSAQKAVVDGL 433
            S+   + +GL
Sbjct: 682 FSSLYMLAEGL 692



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 40/447 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   C+A++L  A  ++ D    G++PD  T+  ++  Y +    D    I  +M 
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMV 251

Query: 70  EAGIS------------------------------------PDVVTYNSLIAGATRNSLL 93
           E G S                                    PD  T+N+L+ G  +   +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +++++D ML+ G  PDV++YNS++  L +LG+  EA      MI  D +P T T+N +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTL 371

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK    + A  + R L   G +P++ T+N LI+GLC     R A  + +E+   G 
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  TY  ++       K    L +L  M+  G       Y T+I  F K  +++EA +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M   GV  + V+YNTLI+  CK  ++E A  L+D+M  +G + DK+T+  L+   C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFC 551

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           + G+IK A   ++ M   G + ++  Y  ++  L K G+++ A  +  S+++K       
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPH 611

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLK 416
            Y+ ++  L + ++   A  L    L+
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLE 638



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 199/390 (51%), Gaps = 5/390 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PD   YN +++      +         +M   GI PDV T+N LI    R   L  
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ +L++M   G+ PD  ++ ++M    + G  D A R+ + M+    +    + N++++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267

Query: 156 GLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           G CK    ++AL   + +  + GF P+  T+N L+ GLCKAG ++ A  I+  +   G+ 
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TY +++    +  + K  +E L  M  +  + +   Y T+I+   K  +++EAT+ 
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              + + G+  D+ ++N+LI   C       A  L +EM  +G E D++T+ +LID LC 
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
            G +  A   L+ M   G   ++  YN ++D   K  KI  A  +F+ MEV    ++S T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVT 507

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           Y++++  LCK++R+  AS+L+   +  G +
Sbjct: 508 YNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 191/436 (43%), Gaps = 57/436 (13%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM----LEMGIPPDVWSYNSLMHCLFQ 124
           ++   SP+   Y  ++    R+        +L++M     EMG  P    +  L+    Q
Sbjct: 75  KKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSP----FLILIESYAQ 130

Query: 125 LGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFR----GLQKHGFV 179
               DE   V   MI    L P T  +N MLN L       N L++       +   G  
Sbjct: 131 FELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDG----NNLKLVEIAHAKMSVWGIK 186

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ T+N+LIK LC+A +LR A  +L+++   G  P+  T+TTIM+           L I
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYC 298
              M   G ++       ++  F K GR+++A +++++M   DG   D  ++NTL+N  C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G ++ A  ++D M ++G++ D YT+  +I GLCK G +K A   L+ M       N  
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366

Query: 359 AYNCIVDRLGKDGKIDHA-----------------------------------INVFESM 383
            YN ++  L K+ +++ A                                   + +FE M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
             K    D FTY+ ++ +LC   +L  A  +L     SG          ++DG   +   
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486

Query: 440 REAKKIQSKIRMAKIS 455
           REA++I  ++ +  +S
Sbjct: 487 REAEEIFDEMEVHGVS 502



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 19/303 (6%)

Query: 153 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L+ L        ALR+F    +K  F PE   Y  ++  L ++G     R IL+++ +S
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-------YCTVIAAFVK 264
           G       +  +++      +++L  EIL  +    +  D FG       Y  ++   V 
Sbjct: 113 GCEMGTSPFLILIESY---AQFELQDEILGVVH---WMIDDFGLKPDTHFYNRMLNLLVD 166

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
              LK       +M   G++ D+ ++N LI   C+  +L  A L+L++M   G   D+ T
Sbjct: 167 GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            T ++ G  + G++ GA    E M + G   +  + N IV    K+G+++ A+N  + M 
Sbjct: 227 FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286

Query: 385 VKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
            +D F     T++++V+ LCKA  +  A +++   L+ G         +V+ GL   G  
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346

Query: 440 REA 442
           +EA
Sbjct: 347 KEA 349


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 216/431 (50%), Gaps = 7/431 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +N+ V  FCK  R+E A   I +   + G  PD  T+N L++  C+         I++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G  PDV TYNS+I+G  +   +  ++++LD+M+     P+  +YN+L+  L +  + 
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  + + +    + P   TFN ++ GLC  R    A+ +F  ++  G  P+  TYN+L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC  G+L  A  +LK++  SG A + ITY T++    +  K +   EI   M+  G 
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +   Y T+I    K  R+++A   M+QM+ +G + D  +YN+L+  +C+ G ++ A  
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           ++  M   G E D  T+  LI GLCKAG ++ A   L  +   G +    AYN ++  L 
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621

Query: 369 KDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRIL 422
           +  K   AIN+F  M        D+ +Y  +   LC     +  A   L+  L+ G    
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681

Query: 423 KSAQKAVVDGL 433
            S+   + +GL
Sbjct: 682 FSSLYMLAEGL 692



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 212/447 (47%), Gaps = 40/447 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   C+A++L  A  ++ D    G++PD  T+  ++  Y +    D    I  +M 
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251

Query: 70  EAGIS------------------------------------PDVVTYNSLIAGATRNSLL 93
           E G S                                    PD  T+N+L+ G  +   +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +++++D ML+ G  PDV++YNS++  L +LG+  EA  V   MI  D +P T T+N +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK    + A  + R L   G +P++ T+N LI+GLC     R A  + +E+   G 
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  TY  ++       K    L +L  M+  G       Y T+I  F K  + +EA +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M   GV  + V+YNTLI+  CK  ++E A  L+D+M  +G + DKYT+  L+   C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           + G+IK A   ++ M   G + ++  Y  ++  L K G+++ A  +  S+++K       
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLK 416
            Y+ ++  L + ++   A  L    L+
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLE 638



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 209/474 (44%), Gaps = 75/474 (15%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
             G+ PD   YN +++      S         +M   GI PDV T+N LI    R   L 
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------------- 139
            ++ +L++M   G+ PD  ++ ++M    + G  D A R+ + M+               
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266

Query: 140 ---CGD------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
              C +                    P   TFN ++NGLCK  +  +A+ +   + + G+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK------------- 225
            P++ TYN +I GLCK G ++ A  +L ++     +PN +TY T++              
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 226 --------------CCFRN--------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
                         C F +        R +++ +E+   M+ KG   D F Y  +I +  
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
             G+L EA + ++QM   G    +++YNTLI+ +CK  K   A  + DEME  G   +  
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  LIDGLCK+  ++ A   ++ M   G   +   YN ++    + G I  A ++ ++M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 384 EV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
                  D  TY +++  LCKA R+  ASKLL S    G+ +   A   V+ GL
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 209/419 (49%), Gaps = 16/419 (3%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC-SLDLLD 101
           T+ +LI++Y QF   D   ++++ M  E G+ PD   YN ++     N L+   SL L++
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML-----NLLVDGNSLKLVE 174

Query: 102 ----EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
               +M   GI PDV ++N L+  L +  +   A  + +DM    L P   TF  ++ G 
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPN 216
            +    D ALR+   + + G     V+ N+++ G CK GR+  A   ++E+ +  G  P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+ T++    +    K  +EI+  M ++GY  D + Y +VI+   K+G +KEA + ++
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           QM+T     + V+YNTLI+  CKE ++E A  L   +  +G   D  T   LI GLC   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
           N + A    E M   G + +   YN ++D L   GK+D A+N+ + ME+    +   TY+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           +++   CKA +   A ++       GV         ++DGL  S    +A ++  ++ M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 189/432 (43%), Gaps = 49/432 (11%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           ++   SP+   Y  ++    R+        +L++M          ++  L+    Q    
Sbjct: 75  KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134

Query: 129 DEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFR----GLQKHGFVPELV 183
           DE   V   MI    L P T  +N MLN L       N+L++       +   G  P++ 
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG----NSLKLVEISHAKMSVWGIKPDVS 190

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+LIK LC+A +LR A  +L+++   G  P+  T+TT+M+           L I   M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGK 302
              G ++       ++  F K GR+++A +++++M   DG   D  ++NTL+N  CK G 
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A  ++D M ++G++ D YT+  +I GLCK G +K A   L+ M       N   YN 
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370

Query: 363 IVDRLGKDGKIDHA-----------------------------------INVFESMEVK- 386
           ++  L K+ +++ A                                   + +FE M  K 
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D FTY+ ++ +LC   +L  A  +L     SG          ++DG   +   REA+
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490

Query: 444 KIQSKIRMAKIS 455
           +I  ++ +  +S
Sbjct: 491 EIFDEMEVHGVS 502



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 19/306 (6%)

Query: 153 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L+ L        ALR+F    +K  F PE   Y  ++  L ++G     + IL+++  S
Sbjct: 53  LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-------YCTVIAAFVK 264
                  T+  +++      +++L  EILS +    +  D FG       Y  ++   V 
Sbjct: 113 RCEMGTSTFLILIESY---AQFELQDEILSVVD---WMIDEFGLKPDTHFYNRMLNLLVD 166

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
              LK       +M   G++ D+ ++N LI   C+  +L  A L+L++M   G   D+ T
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            T ++ G  + G++ GA    E M + G   +  + N IV    K+G+++ A+N  + M 
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286

Query: 385 VKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
            +D F     T++++V+ LCKA  +  A +++   L+ G         +V+ GL   G  
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346

Query: 440 REAKKI 445
           +EA ++
Sbjct: 347 KEAVEV 352


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 213/408 (52%), Gaps = 8/408 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  +   A +++   ++LG  PD  T+N LI+  C          +++RM 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD+VTYNS++ G  R+   S + D+L +M E  +  DV++Y++++  L + G  D
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  +F++M    +     T+N ++ GLCK  ++ D AL + + +     VP ++T+N+L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVL 304

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKG 247
           +    K G+L+ A  + KE+   G +PN ITY T+M   C +NR  +    +L  M R  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NMLDLMVRNK 363

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + D   + ++I  +  + R+ +       +   G+  + V+Y+ L+  +C+ GK++ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D  T+ IL+DGLC  G ++ A    E + K   D  +  Y  I++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            K GK++ A N+F S+  K    +  TY+ M+  LCK   L  A+ LL
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 213/431 (49%), Gaps = 4/431 (0%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C   ++ KA  ++   +  G  PD+VTYN +++  C+       + +L 
Sbjct: 158 TTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLR 217

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M E  +  DV TY+++I    R+  +  ++ L  EM   GI   V +YNSL+  L + G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K ++   + +DM+  ++ P   TFN++L+   K      A  +++ +   G  P ++TYN
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G C   RL  A  +L  +  +  +P+ +T+T+++K     ++   G+++   + ++
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  ++  F + G++K A +  ++MV+ GV  D+++Y  L++  C  GKLE A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + ++++K   +     +T +I+G+CK G ++ A      +   G   N+  Y  ++  
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K G +  A  +   ME      +  TY++++    +   L +++KL+      G    
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577

Query: 423 KSAQKAVVDGL 433
            S+ K V+D L
Sbjct: 578 ASSIKMVIDML 588



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 212/418 (50%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  ++ T N++I+ +C+       Y++L ++ + G  PD  T+N+LI G      +S +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+E G  PD+ +YNS+++ + + G    A  + + M   ++     T++ +++ 
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC++   D A+ +F+ ++  G    +VTYN L++GLCKAG+      +LK++      PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++    +  K +   E+   M  +G + +   Y T++  +    RL EA + ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV +    DIV++ +LI  YC   +++    +   + K+G   +  T++IL+ G C++G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
            IK A    + M   G   ++  Y  ++D L  +GK++ A+ +FE ++          Y+
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++  +CK  ++  A  L  S    GV+        ++ GL   G   EA  +  K+ 
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 176/339 (51%), Gaps = 7/339 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F ++ T+ +   V T+       CKA +      ++ D +   ++P+V+T+N+L+D + 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         +   M   GISP+++TYN+L+ G    + LS + ++LD M+     PD+ 
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           ++ SL+     + + D+  +VF+++    L     T++I++ G C++     A  +F+ +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
             HG +P+++TY IL+ GLC  G+L  A  I ++L  S      + YTTI++   +  K 
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +    +  ++  KG   +   Y  +I+   K G L EA   + +M  DG   +  +YNTL
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           I  + ++G L A+  L++EM+  GF  D  +  ++ID L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 4/289 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +FQ+MI     P    F+   + + + +  +  L   + L+ +G    + T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +   A  +L ++   G+ P+  T+ T++       K    + ++  M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y +++    + G    A D + +M    V+ D+ +Y+T+I+  C++G ++AA
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EME +G +    T+  L+ GLCKAG      L L+ M       N+  +N ++D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K+GK+  A  +++ M  +    +  TY++++   C   RL  A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C  NRL +A  ++   +R    PD+VT+  LI  YC     D G  +   + + G+  +
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY+ L+ G  ++  +  + +L  EM+  G+ PDV +Y  L+  L   GK ++A  +F+
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462

Query: 137 DM-----------------------------------ICGDLTPCTATFNIMLNGLCKNR 161
           D+                                    C  + P   T+ +M++GLCK  
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  + R +++ G  P   TYN LI+   + G L  +  +++E+   G + +A +  
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++         K  L++LS
Sbjct: 583 MVIDMLLSGELDKSFLDMLS 602


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 217/482 (45%), Gaps = 78/482 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   ++KAE+I+   +  G+ PD+ TY+++ID  C+  + D    +L +M E
Sbjct: 249 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ +TYNSLI G + + + + S+ +  +M   G+ P V + NS +H LF+ G+ +E
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 131 A--------------------------------------NRVFQDMICGDLTPCTATFNI 152
           A                                      + +F  M+   + P    FNI
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNI 428

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++N   +    D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL  A      + D G
Sbjct: 429 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CTVIAAFVKIGRLKEA 271
             P+   Y  +++ C  + +     E++S M  K     G  Y  ++I    K GR+ E 
Sbjct: 489 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D M+ MV  G + ++V++N+L+  YC  G +E A+ LLD M   G E + Y +  L+DG
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 608

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            C                                   K+G+ID A+ VF  M  K     
Sbjct: 609 YC-----------------------------------KNGRIDDALTVFRDMLHKGVKPT 633

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           S  YS ++H L +A+R  +A K+    ++SG  +       V+ GL  + C  EA  +  
Sbjct: 634 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 693

Query: 448 KI 449
           K+
Sbjct: 694 KL 695



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 11/390 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + TYN+LID Y +    D G  I+ R+ + G+ PD  +Y SLI G  ++  +  +  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM+E G+ P +   NS++  L ++ + D+A  + Q M+   + P   T++++++GLCK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           ++  D A R+   + + G  P  +TYN LI G   +G    +  + K++   G  P    
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT----VIAAFVKIGRLKEATDYM 275
             + +   F++ +      I  +M  KG   D   Y T    V   +V +  +    +  
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVM-WHNIF 411

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M+T G+  +   +N LIN Y + G ++ A L+ ++M+ +G   D  T   +I  LC+ 
Sbjct: 412 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 471

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----- 390
           G +  A     +M  IG   +   Y C++      G++  A  +   M  KD        
Sbjct: 472 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 531

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +SS+++NLCK  R+     ++   +++G R
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQTGQR 561



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 424 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 483

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ L + G
Sbjct: 484 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 543

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + A  +   +   G  P    Y 
Sbjct: 544 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 603

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+  A  + +++   G  P ++ Y+ I+   F+ R+     ++   M   
Sbjct: 604 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIES 663

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  V+    +     EA   +E++    V+ DI+++N +I+   K G+ + A
Sbjct: 664 GTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEA 723

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L D +   G   +  T++++I  L K  + + A      + K G  S+    N IV  
Sbjct: 724 KELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 783

Query: 367 LGKDGKIDHAIN 378
           L    ++  A N
Sbjct: 784 LLNKAEVAKASN 795



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 152/306 (49%), Gaps = 1/306 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  R+ + + I+   ++ G  P+VVT+N L++ YC   + +  + +L+ M   GI
Sbjct: 536 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 595

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+   Y +L+ G  +N  +  +L +  +ML  G+ P    Y+ ++H LFQ  +   A +
Sbjct: 596 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 655

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F +MI    T    T+ ++L GLC+N  TD A  +   L       +++T+NI+I  + 
Sbjct: 656 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 715

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A+ +   +   G  PN  TY+ ++    +   Y+    +  ++++ G+  D  
Sbjct: 716 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 775

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
               ++   +    + +A++Y+  +  + + L+  + + L +L+ +EGK      LL   
Sbjct: 776 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL-PA 834

Query: 314 EKQGFE 319
           + Q FE
Sbjct: 835 KYQFFE 840



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 5/380 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+LI+AY +    D    I   M+  G+ PD VT+ ++I+   R   L  +
Sbjct: 418 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 477

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLN 155
           L   + M+++G+PP    Y  L+      G+  +A  +  +M+  D+ P     F+ ++N
Sbjct: 478 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 537

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK         +   + + G  P +VT+N L++G C  G +  A  +L  +   G  P
Sbjct: 538 NLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 597

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y T++    +N +    L +   M  KG       Y  ++    +  R   A    
Sbjct: 598 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMF 657

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A +LL+++     + D  T  I+I  + K 
Sbjct: 658 HEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKV 717

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G  + A+   + ++  G   N++ Y+ ++  L K+   + A N+F S+E      DS   
Sbjct: 718 GRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLL 777

Query: 392 SSMVHNLCKAKRLPSASKLL 411
           + +V  L     +  AS  L
Sbjct: 778 NHIVRMLLNKAEVAKASNYL 797



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 36/366 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTY-NMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C    L KA+ +I + +   + P  V Y + +I+  C+      G  I++ M + G  P+
Sbjct: 504 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 563

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+NSL+ G      +  +  LLD M  +GI P+ + Y +L+    + G+ D+A  VF+
Sbjct: 564 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 623

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   + P +  ++I+L+GL + R T  A +MF  + + G    + TY +++ GLC+  
Sbjct: 624 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 683

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +                                LE L AM  K   FD   + 
Sbjct: 684 CTDEANML--------------------------------LEKLFAMNVK---FDIITFN 708

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI+A  K+GR +EA +  + + T G+  +I +Y+ +I    KE   E A  L   +EK 
Sbjct: 709 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 768

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D      ++  L     +  A  +L  + +          + +     ++GK    
Sbjct: 769 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREH 828

Query: 377 INVFES 382
           I +  +
Sbjct: 829 IKLLPA 834



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/239 (18%), Positives = 94/239 (39%), Gaps = 35/239 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ L +I +    +A R   A+ +  + I  G    + TY +++   C+    D    
Sbjct: 631 KPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANM 690

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L ++    +  D++T+N +I+                                    +F
Sbjct: 691 LLEKLFAMNVKFDIITFNIVISA-----------------------------------MF 715

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+  EA  +F  +    L P   T+++M+  L K    + A  +F  ++K G   +  
Sbjct: 716 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 775

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             N +++ L     +  A   L  +G++     A T + +     R  KY+  +++L A
Sbjct: 776 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPA 834


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 212/397 (53%), Gaps = 11/397 (2%)

Query: 26  AEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           ++A IID ++L       G  PDV+TY+ +I+  C+  S      +L +M E G  P+VV
Sbjct: 59  SKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVV 118

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y+++I    ++ L++ +++ L EM+  GI P+V +Y+S++H    LG+ +EA  +F+ M
Sbjct: 119 VYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQM 178

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +  ++ P T TFNI+++GL K      A  +F  + + G  P + TYN L+ G C   ++
Sbjct: 179 VERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQM 238

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A+ +   +   G AP+  +Y  ++K   ++ +      +L+ M  K  T D   Y T+
Sbjct: 239 DEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTL 298

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +  F + GR ++A   +E+M + G+  D+++Y+ +++  CK+G L+ A+ LL  M++   
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E + + +TILI G+C  G ++ AR     +   G   ++  Y  ++  L K G  + A  
Sbjct: 359 EPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACE 418

Query: 379 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           +F  M V     +S TY+ ++    +     +A +L+
Sbjct: 419 LFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLI 455



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 214/442 (48%), Gaps = 6/442 (1%)

Query: 10  LNICVCTFCKANR--LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L I +  FC +N      A +++ +  +LG+ P+ VT++ L++             + + 
Sbjct: 13  LTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDE 72

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G  PDV+TY+++I G  +    + ++ LL +M E G  P+V  Y++++  L +   
Sbjct: 73  MVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKL 132

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA     +M+   ++P   T++ +L+G C    ++ A  +F+ + +   +P+ VT+NI
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GL K G +  A+ + + + + G  PN  TY  +M       +     ++ + M RKG
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  +I    K GR+ EA   + +M    +  D V+Y+TL+  +C++G+ + A 
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL+EM   G   D  T++I++DGLCK G++  A   L+ M +   + N+  Y  ++  +
Sbjct: 313 KLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM 372

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              GK++ A  +F ++ VK    D  TY+ M+  L K      A +L       G     
Sbjct: 373 CNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNS 432

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                ++ G   +G    A ++
Sbjct: 433 CTYNVIIQGFLRNGDTSNAGRL 454



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 198/411 (48%), Gaps = 6/411 (1%)

Query: 38  VLPDVVTYNMLIDAYCQ--FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           + PDV T  +LI+ +C      F   +++L  M + G+ P+ VT+++L+ G +  + +  
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L DEM++MG  PDV +Y+++++ L ++G    A ++ + M      P    ++ +++
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK++    A+     +   G  P +VTY+ ++ G C  GR   A  + K++ +    P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+  ++    +         +   M  KG   +   Y  ++  +    ++ EA    
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             MV  G    + SYN LI  +CK G+++ A  LL EM  +    D  T++ L+ G C+ 
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G  + A+  LE M   G   +L  Y+ ++D L K G +D A  + ++M+      + F Y
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           + ++  +C   +L +A +L  +    G++        ++ GL   G   EA
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEA 416



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 174/355 (49%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK   + +A   + + +  G+ P+VVTY+ ++  +C     +   ++  +M E  + P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D VT+N L+ G ++  ++  +  + + M+E G+ P+V +YN+LM       + DEA ++F
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+     P   ++NI++ G CK+   D A  +   +      P+ VTY+ L+KG C+ 
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR + A+ +L+E+   G  P+ +TY+ ++    +        E+L AM+      + F Y
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I      G+L+ A +    +   G+Q D+V+Y  +I+   K G    A  L  +M  
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAV 425

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            G   +  T+ ++I G  + G+   A   +E M   GF ++   +  + D   +D
Sbjct: 426 HGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRD 480



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 176/354 (49%), Gaps = 8/354 (2%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDE---ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           I PDV++   L++C F     D    A  V  +M    L P   TF+ +LNGL       
Sbjct: 6   IRPDVYTLTILINC-FCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           +A+++F  + K G+ P+++TY+ +I GLCK G    A  +LK++ + G  PN + Y+TI+
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +++     +E LS M  +G + +   Y +++  F  +GR  EAT   +QMV   V 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D V++N L++   KEG +  A  + + M ++G E +  T+  L+DG C    +  A+  
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
              M + G   ++ +YN ++    K G+ID A  +   M  K    D+ TYS+++   C+
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             R   A KLL      G+         V+DGL   G   EA ++   ++ +KI
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 141/294 (47%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   NI V    K   + +A+ +    I  GV P+V TYN L+D YC     D    + N
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G +P V +YN LI G  ++  +  +  LL EM    + PD  +Y++LM    Q G
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P +A ++ ++M    L P   T++I+L+GLCK  + D A  + + +Q+    P +  Y 
Sbjct: 307 RPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYT 366

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI+G+C  G+L  AR +   L   G  P+ +TYT ++    +        E+   M   
Sbjct: 367 ILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVH 426

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           G   +   Y  +I  F++ G    A   +E+MV  G   D  ++  L +L  ++
Sbjct: 427 GCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRD 480



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 114/215 (53%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  NI +   CK+ R+++A+ ++ +     + PD VTY+ L+  +CQ         +L
Sbjct: 256 SVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLL 315

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             MR  G+ PD++TY+ ++ G  +   L  + +LL  M E  I P+++ Y  L+  +   
Sbjct: 316 EEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNF 375

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK + A  +F ++    + P   T+ +M++GL K   ++ A  +FR +  HG +P   TY
Sbjct: 376 GKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTY 435

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           N++I+G  + G    A  +++E+   G + ++ T+
Sbjct: 436 NVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 14/153 (9%)

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY-----MNKIGFDSNLEAYNCIVDRL 367
           M+      D YT TILI+  C + +      H  +     M K+G   N   ++ +++ L
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNH---DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGL 57

Query: 368 GKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
               KI  A+ +F+ M VK     D  TYS++++ LCK      A +LL    + G +  
Sbjct: 58  SSKAKIIDAVKLFDEM-VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPN 116

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                 ++D L       EA +  S++    IS
Sbjct: 117 VVVYSTIIDSLCKDKLITEAMEFLSEMVNRGIS 149


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 220/426 (51%), Gaps = 7/426 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG +   R  N  +    ++N+ ++AE+  +    +G+ P++ TYN+LI   C+   FD
Sbjct: 82  IFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFD 141

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +LN M   G SPDV +Y +LI    +N  +S +L L DEM E G+ PDV  YN L+
Sbjct: 142 KAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 201

Query: 120 HCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
              F+ G    A+ +++ ++ G  + P   ++N+M+NGLCK    D +  ++  ++K+  
Sbjct: 202 DGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 261

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             +L TY+ LI GLC +G L  A  + KE+ ++G +P+ + Y T++    R  + +  LE
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+++G       Y  +I    +  ++ EA    E +       D ++Y  L++  C
Sbjct: 322 LWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G L  A  +L+E E    + D + ++ +I+GLC+ G +      L+ M K G   N  
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY 440

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSC 414
             N +++   +  K++ A+  F +M  K  F    TY+++++ L KA+R   A  L+   
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500

Query: 415 LKSGVR 420
           L+ G +
Sbjct: 501 LQKGWK 506



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 189/413 (45%), Gaps = 5/413 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  + +++  I     +     D+ TY+ LI   C   + D    +   M E
Sbjct: 234 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SPDVV YN+++ G  R   +   L+L   M + G    V SYN L+  LF+  K DE
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDE 352

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +++ +   D    + T+ ++++GLCKN Y + AL +    +      +   Y+ +I 
Sbjct: 353 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 412

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ GRL     +L ++   G  PN      ++    R  K +  L     M  KG   
Sbjct: 413 GLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 472

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y T+I    K  R  EA   +++M+  G + ++++Y+ L+N  C+  KL+ A  L 
Sbjct: 473 TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW 532

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +  ++GF+ D   H I+I GLC +G ++ A      M +     NL  +N +++   K 
Sbjct: 533 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKV 592

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              + A  +++ +       D  +Y+  +  LC   R+  A   L   +  GV
Sbjct: 593 RDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGV 645



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 202/425 (47%), Gaps = 43/425 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC 95
           GV PDV  YN+LID + +         I  R+ +   + P++ +YN +I G  +      
Sbjct: 189 GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDE 248

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           S ++   M +     D+++Y++L+H L   G  D A RV+++M    ++P    +N MLN
Sbjct: 249 SFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 308

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +    +  L +++ ++K G    +V+YNILI+GL +  ++  A  I + L +     
Sbjct: 309 GYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA 367

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT------------------ 257
           +++TY  ++    +N      L IL   +      D F Y +                  
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427

Query: 258 -----------------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                            VI  FV+  +L++A  +   MV+ G    +V+YNTLIN   K 
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA 359
            +   AY L+ EM ++G++ +  T+++L++GLC+   +  A  L  + + K GF  +++ 
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKM 546

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +N I+  L   GK++ A+ ++  M+    V +  T+++++    K +    ASK+    L
Sbjct: 547 HNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 606

Query: 416 KSGVR 420
           + G++
Sbjct: 607 QYGLQ 611



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 154/324 (47%), Gaps = 8/324 (2%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   CK   L KA +I+ +        D   Y+ +I+  C+    D    +L++M + 
Sbjct: 374 VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 433

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P+    N++I G  R S L  +L     M+  G  P V +YN+L++ L +  +  EA
Sbjct: 434 GCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 493

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + ++M+     P   T+++++NGLC+ +  D AL ++    + GF P++  +NI+I G
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LC +G++  A  +  E+      PN +T+ T+M+  ++ R ++   +I   + + G   D
Sbjct: 554 LCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPD 613

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-EGKLEAAYLLL 310
              Y   +       R+ +A  ++   V  GV    +++N L+  Y   +G +E  ++  
Sbjct: 614 IISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPA 673

Query: 311 D-------EMEKQGFECDKYTHTI 327
                   +M   GF CDK +  +
Sbjct: 674 SMKGNPGMQMRYFGFVCDKLSSPL 697



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 1/246 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F +A++LE A     + +  G  P VVTYN LI+   +   F   Y ++  M +
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ 502

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+++TY+ L+ G  +   L  +L+L  + LE G  PDV  +N ++H L   GK ++
Sbjct: 503 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +++ +M   +  P   T N ++ G  K R  + A +++  + ++G  P++++YNI +K
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK-RKGYT 249
           GLC   R+  A   L +  D G  P AIT+  +++     + Y   + + ++MK   G  
Sbjct: 623 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMKGNPGMQ 682

Query: 250 FDGFGY 255
              FG+
Sbjct: 683 MRYFGF 688



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 138/291 (47%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D +TY +L+   C+    +   +IL          D   Y+S+I G  R   L     +L
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           D+M + G  P+ +  N++++   +  K ++A R F +M+     P   T+N ++NGL K 
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A  + + + + G+ P ++TY++L+ GLC+  +L  A  +  +  + G  P+   +
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 547

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             I+     + K +  L++ S MK++    +   + T++  F K+   + A+   + ++ 
Sbjct: 548 NIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 607

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            G+Q DI+SYN  +   C   ++  A   L++   +G      T  IL+ G
Sbjct: 608 YGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/117 (21%), Positives = 62/117 (52%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K   ++ NI +   C + ++E A  +  +  +   +P++VT+N L++ + +   F+    
Sbjct: 541 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASK 600

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           I + + + G+ PD+++YN  + G      +S ++  L++ ++ G+ P   ++N L+ 
Sbjct: 601 IWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQ 657


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 217/412 (52%), Gaps = 7/412 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN +I  +C+    D    +L+RM++ G  PDVVTYN LI        L  +L +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           +D++L+    P V +Y  L+      G  DEA ++  +M+   L P   T+N+++NG+CK
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A      + K+G V  + TYNIL++ L   G+      ++ ++   G  PN IT
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R+ K      +L  MK K    DG+ Y  +I+A  + G++  A ++++ M+
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           + G   DI+SYN+++   CK G  + A  + +++ + G   +  ++  L   L  +G+ I
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDS-FTYSS 393
           +   + LE ++  G D +   YN ++  L +DG +D AI    ++FES + + +  +Y++
Sbjct: 444 RALGMILEMLSN-GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNT 502

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++  LCK +R+  A ++L + +  G    ++    ++ G+  +G R +A ++
Sbjct: 503 VLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 144/299 (48%), Gaps = 9/299 (3%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            K DE+    Q M+     P       ++ G    +  + A+++   L+KHG  P++  Y
Sbjct: 91  AKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAY 149

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMK 244
           N +I G CKA R+  A  +L  +   G  P+ +TY  ++   C R R   L L ++  + 
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR-LDLALRVMDQLL 208

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +         Y  +I A +  G + EA   +++M++ G++ D  +YN ++N  CKEG L+
Sbjct: 209 KDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLD 268

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCI 363
            A+  L  + K G      T+ IL+  L   G  + G +L  + + K G + N   Y+ +
Sbjct: 269 RAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK-GCEPNPITYSTL 327

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +  L +DGKID A NV + M+ K    D ++Y  ++  LC+  ++  A + L   +  G
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 5/268 (1%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
             F   LN  CK+   D +L   + +   G+ P+++    LIKG     ++  A  +++ 
Sbjct: 78  TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           L   G  P+   Y  ++    +  +     ++L  MK++G+  D   Y  +I  F   GR
Sbjct: 138 LEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L  A   M+Q++ D  +  +++Y  LI     +G ++ A  LLDEM  +G   D+YT+ +
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           +++G+CK G +  A   L  ++K G  + +  YN ++  L  +GK ++   +   M VK 
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLL 411
              +  TYS+++  LC+  ++  A  +L
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVL 344



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T+ + C ++ KY   L  L  M  +GY  D      +I  F  + ++++A   ME +   
Sbjct: 83  TLNRSC-KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH 141

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + D+ +YN +I+ +CK  +++ A  +LD M+K+GFE D  T+ ILI   C  G +  A
Sbjct: 142 G-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              ++ + K      +  Y  +++     G ID A+ + + M  +    D +TY+ +V+ 
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +CK   L  A + L    K+G     S    ++  L + G     +K+ S +
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 7/209 (3%)

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           + Y F    +   +    K  +  E+  +++ MV  G + D++    LI  +    K+E 
Sbjct: 71  QDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEK 130

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +++ +EK G + D + +  +I G CKA  +  A   L+ M K GF+ ++  YN ++ 
Sbjct: 131 AIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189

Query: 366 RLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
                G++D A+ V + + +KD+      TY+ ++        +  A KLL   L  G+R
Sbjct: 190 NFCGRGRLDLALRVMDQL-LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             +     VV+G+   G    A +  S+I
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 206/399 (51%), Gaps = 8/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RLE+A   +   +  G  PDV TY  +I A C           L  M    ++P+
Sbjct: 21  LCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN 80

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY  LI G  +   +  ++ LL +M +  +P  V +YNSL+  L +  +  EA  + +
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLE 139

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P   T+  ++ G CK++ +D+ALR+F  L   GF P++VTY+ LI GLCK G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 197 RLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           RL+ A  +   +  SG   PN +TY +++    R  K    + +L  M   G + D   Y
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T++  F K+ RL +A D + QM   G+  D+V++ +L++  C+E +L  A  +L EM +
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +      YT+  ++DG C+A  ++ AR  +  + ++    N+ ++N ++  L K  +   
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           A+ + E    +    D   Y++++  LC+ K++  A ++
Sbjct: 378 AMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRV 416



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 6/345 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           S D VTY SLI G  +   L  +L  L +M+  G  PDV++Y +++H L    +  EA +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             ++M   +LTP   T+ ++++GLCK    D A+ +   ++K   VP  VTYN LI GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KA R   A  +L+E+  SG  P+  TYTT++    +++K    L +   +  +G+  D  
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDE 312
            Y  +I    K GRLKEA D   +M+  G  + + V+YN+LI+ +C+ GK++ A  LL+ 
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M + G   D  T+T L++G CK   +  A   L  M + G   ++  +  ++D L ++ +
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 373 IDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLS 413
           +  A+++   M  K      +TY++++   C+A +L  A K +L 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE 351



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 210/414 (50%), Gaps = 7/414 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+++A A++   +R   +P  VTYN LI   C+       Y +L  M  +G  PD
Sbjct: 91  LCKGGRVDEAVALL-SKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD 149

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY +LI G  ++     +L + ++++  G  PDV +Y+ L+  L + G+  EA  +F 
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209

Query: 137 DMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            MI  G   P T T+N +++G C+    D A+ +   + + G  P++VTY  L+ G CK 
Sbjct: 210 RMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 269

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +L ++   G  P+ +T+T++M    R  +    + IL  M+RK  +   + Y
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329

Query: 256 CTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            T++  + +  +L+EA  +M E+M       ++VS+N +I   CK  +   A  L++E  
Sbjct: 330 NTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           ++    D   +T +IDGLC+   +  A R++ + + + G   N   Y+ +V  L   G +
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGML 446

Query: 374 DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           D A    E   V +  TY+ ++    KA R   A +LL   ++ G  +++S Q+
Sbjct: 447 DRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQSHQR 500



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 44/310 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+  ++++A  ++      G  PDVVTY  L++ +C+    D  Y +LN+M  
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PDVVT+ SL+ G  R + LS ++ +L EM      P V++YN+++    +  + +E
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344

Query: 131 ANR-VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A + + ++M C    P   +FNIM+ GLCK   +  A+ +    ++    P++V Y  +I
Sbjct: 345 ARKFMLEEMDC---PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401

Query: 190 KGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            GLC+  ++  A R   K L + G  PN+ITY+T++                        
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVT----------------------- 438

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                G C         G L  A  Y+E+    G   +I +YN LI+ + K  + E A  
Sbjct: 439 -----GLCNA-------GMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 309 LLDEMEKQGF 318
           LLD+M ++GF
Sbjct: 483 LLDDMVQRGF 492



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           + T+    D V+Y +LI   CK  +LE A + L +M  +GF  D YT+T +I  LC    
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSM 394
           +  AR  LE M       N+  Y  ++D L K G++D A+ +   M    V  + TY+S+
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL 121

Query: 395 VHNLCKAKRLPSASKLLLSCLKSG 418
           +  LCKA+R   A  LL   + SG
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSG 145


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 206/399 (51%), Gaps = 8/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RLE+A   +   +  G  PDV TY  +I A C           L  M    ++P+
Sbjct: 21  LCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPN 80

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY  LI G  +   +  ++ LL +M +  +P  V +YNSL+  L +  +  EA  + +
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLE 139

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P   T+  ++ G CK++ +D+ALR+F  L   GF P++VTY+ LI GLCK G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 197 RLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           RL+ A  +   +  SG   PN +TY +++    R  K    + +L  M   G + D   Y
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T++  F K+ RL +A D + QM   G+  D+V++ +L++  C+E +L  A  +L EM +
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +      YT+  ++DG C+A  ++ AR  +  + ++    N+ ++N ++  L K  +   
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           A+ + E    +    D   Y++++  LC+ K++  A ++
Sbjct: 378 AMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRV 416



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 6/345 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           S D VTY SLI G  +   L  +L  L +M+  G  PDV++Y +++H L    +  EA +
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             ++M   +LTP   T+ ++++GLCK    D A+ +   ++K   VP  VTYN LI GLC
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KA R   A  +L+E+  SG  P+  TYTT++    +++K    L +   +  +G+  D  
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDE 312
            Y  +I    K GRLKEA D   +M+  G  + + V+YN+LI+ +C+ GK++ A  LL+ 
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M + G   D  T+T L++G CK   +  A   L  M + G   ++  +  ++D L ++ +
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 373 IDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLS 413
           +  A+++   M  K      +TY++++   C+A +L  A K +L 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE 351



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 209/414 (50%), Gaps = 7/414 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+++A A++   +R   +P  VTYN LI   C+       Y +L  M  +G  PD
Sbjct: 91  LCKGGRVDEAVALL-SKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPD 149

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY +LI G  ++     +L + ++++  G  PDV +Y+ L+  L + G+  EA  +F 
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209

Query: 137 DMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            MI  G   P T T+N +++G C+    D A+ +   + + G  P++VTY  L+ G CK 
Sbjct: 210 RMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 269

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +L ++   G  P+ +T+T++M    R  +    + IL  M+RK  +   + Y
Sbjct: 270 ARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329

Query: 256 CTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            T++  + +  +L+EA  +M E+M       ++VS+N +I   CK  +   A  L++E  
Sbjct: 330 NTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           ++    D   +T +IDGLC+   +  A R++ + + + G   N   Y+ ++  L   G +
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGML 446

Query: 374 DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           D A    E   V +  TY+ ++    KA R   A +LL   ++ G   ++S Q+
Sbjct: 447 DRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGGVQSHQR 500



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 183/375 (48%), Gaps = 8/375 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA R  +A  ++ + +  G +PD+ TY  LI  +C+    D    +  ++  
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPD 129
            G  PDVVTY+ LI G  +   L  ++DL   M++ G   P+  +YNSL+    ++GK D
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + M     +P   T+  ++NG CK    D+A  +   + + G  P++VT+  L+
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+  RL  A  IL E+     +P   TY TI+    R  + +   + +  ++     
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCP 356

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   +  +I    K+ R  EA + +E+        D+V Y T+I+  C+E K++ A  +
Sbjct: 357 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRV 416

Query: 310 LDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             +M E+ G   +  T++ LI GLC AG +  AR ++E     G   N+  YN ++D   
Sbjct: 417 YRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFR 472

Query: 369 KDGKIDHAINVFESM 383
           K  + + A  + + M
Sbjct: 473 KANRDEDARELLDDM 487



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 44/310 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+  ++++A  ++      G  PDVVTY  L++ +C+    D  Y +LN+M  
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PDVVT+ SL+ G  R + LS ++ +L EM      P V++YN+++    +  + +E
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344

Query: 131 ANR-VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A + + ++M C    P   +FNIM+ GLCK   +  A+ +    ++    P++V Y  +I
Sbjct: 345 ARKFMLEEMDC---PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401

Query: 190 KGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            GLC+  ++  A R   K L + G  PN+ITY+T+                         
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL------------------------- 436

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                     I      G L  A  Y+E+    G   +I +YN LI+ + K  + E A  
Sbjct: 437 ----------ITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 309 LLDEMEKQGF 318
           LLD+M ++GF
Sbjct: 483 LLDDMVQRGF 492



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           + T+    D V+Y +LI   CK  +LE A + L +M  +GF  D YT+T +I  LC    
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSM 394
           +  AR  LE M       N+  Y  ++D L K G++D A+ +   M    V  + TY+S+
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL 121

Query: 395 VHNLCKAKRLPSASKLLLSCLKSG 418
           +  LCKA+R   A  LL   + SG
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSG 145


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 211/411 (51%), Gaps = 7/411 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + YN ++  YC     DA   ++  M    + PD  TYN+LI G       + +L +LDE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           ML     PDV +Y  L+    +     +A ++  +M     TP   T+N+++NG+C+   
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D+A+   + L  +G  P  V+YNI++KGLC A R   A  ++ E+G  G  PN +T+  
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R    +  LE+L  + + G T +   Y  ++ AF K  ++ +A  +++ MV+ G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DIVSYNTL+   C+ G+++ A  LL +++ +G      ++  +IDGL KAG  K A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMVHNL 398
             L  M   G   ++  Y+ I   L ++ +I+ AI  F   + M ++ ++  Y++++  L
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           CK +   SA  L    + +G    +S    +++GL + G  +EA+ +  ++
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +C A +L+ A  ++ +   + V PD  TYN LI   C          +L+ M  
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PDVVTY  L+    + S    ++ LLDEM + G  PD+ +YN +++ + Q G+ D+
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    +++      P T ++NI+L GLC     ++A  +   + + G  P +VT+N+LI 
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G +  A  +L+++   G  PN+++Y  ++    + +K    +  L  M  +G   
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T++ A  + G +  A + + Q+   G    ++SYNT+I+   K GK + A  LL
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM  +G + D  T++ +  GLC+   I+ A      +  +G   N   YN I+  L K 
Sbjct: 301 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 360

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS-CLKSGVRIL 422
            +   AI++F  M     + +  TY+ ++  L     +  A  LL   C ++G  IL
Sbjct: 361 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEIL 417


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 228/479 (47%), Gaps = 39/479 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   CK  ++E  ++ + D    GV PDVVTYN LI+AYC+    +  + +++ M 
Sbjct: 257 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 316

Query: 70  EAGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLD--- 98
             G+ P V TYN++I G                          AT N LL   C  D   
Sbjct: 317 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 376

Query: 99  ----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
               + DEM   G+ PD+ S+++L+  L + G  D+A + F+DM    L P    + I++
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            G C+N     AL++   + + G V ++VTYN ++ GLCK   L  A  +  E+ + G  
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  T+TT++    ++      + +   M ++    D   Y T+I  F K   +++  + 
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M++  +  + +SY  LIN YC  G +  A+ L DEM ++GFE    T   ++ G C+
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AGN   A   L  M   G   +   YN +++   K+  +D A  +   ME    + D  T
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+ +++   +  R+  A  ++L  ++ GV   +S   ++++G       +EA ++  ++
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 735



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 183/377 (48%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   NI +   C+ + +  AE I  +    GV+PD+V+++ LI    +    D       
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+ AG++PD V Y  LI G  RN ++S +L + DEMLE G   DV +YN++++ L +  
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA+ +F +M    + P   TF  ++NG  K+   + A+ +F  + +    P++VTYN
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK   +     +  ++      PN I+Y  ++              +   M  K
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 598

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+        T++  + + G   +A +++  M+  G+  D ++YNTLIN + KE  ++ A
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + L+++ME  G   D  T+ ++++G  + G ++ A L +  M + G + +   Y  +++ 
Sbjct: 659 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718

Query: 367 LGKDGKIDHAINVFESM 383
                 +  A  V + M
Sbjct: 719 HVTQNNLKEAFRVHDEM 735



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 171/332 (51%), Gaps = 2/332 (0%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L++A     D    G+ PD V Y +LI  +C+         + + M E G   DVVTYN+
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 469

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++ G  +  +LS + +L  EM E G+ PD +++ +L++   + G  ++A  +F+ MI  +
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L P   T+N +++G CK    +    ++  +      P  ++Y ILI G C  G +  A 
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 589

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  E+ + G     IT  TI+K   R        E LS M  KG   DG  Y T+I  F
Sbjct: 590 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 649

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
           +K   +  A   + +M   G+  D+++YN ++N + ++G+++ A L++ +M ++G   D+
Sbjct: 650 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 709

Query: 323 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
            T+T LI+G     N+K A R+H E + + GF
Sbjct: 710 STYTSLINGHVTQNNLKEAFRVHDEMLQR-GF 740



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 205/451 (45%), Gaps = 6/451 (1%)

Query: 9   LLNICVCTFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + ++ V T+ +A +L E  EA  +   + G+   +   N L+    +    D  + I   
Sbjct: 186 VFDLLVRTYVQARKLREGCEAFRVLKSK-GLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +  +G+  +V T N +I    +N  +  +   L +M E G+ PDV +YN+L++   + G 
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  +   M    L PC  T+N ++NGLCK      A  +   + K G  P+  TYNI
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+   C+   +  A  I  E+   G  P+ ++++ ++    +N      L+    MK  G
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  F + G + EA    ++M+  G  LD+V+YNT++N  CKE  L  A 
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM ++G   D YT T LI+G  K GN+  A    E M +     ++  YN ++D  
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K  +++    ++  M  +    +  +Y  +++  C    +  A +L    ++ G     
Sbjct: 545 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 604

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                +V G   +G   +A +  S + +  I
Sbjct: 605 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 635



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 195/434 (44%), Gaps = 6/434 (1%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            +R+E  E++++     G  P  + +++L+  Y Q      G      ++  G+   +  
Sbjct: 164 VSRVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 221

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
            NSL+ G  +   +  + ++  E++  G+  +V++ N +++ L +  K +       DM 
Sbjct: 222 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 281

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P   T+N ++N  C+    + A  +   +   G  P + TYN +I GLCK G+  
Sbjct: 282 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 341

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A+ +L E+   G +P+  TY  ++  C RN        I   M  +G   D   +  +I
Sbjct: 342 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 401

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               K G L +A  Y   M   G+  D V Y  LI  +C+ G +  A  + DEM +QG  
Sbjct: 402 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 461

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+  +++GLCK   +  A      M + G   +   +  +++   KDG ++ A+ +
Sbjct: 462 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 521

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           FE M  +    D  TY++++   CK   +   ++L    +   +     +   +++G  +
Sbjct: 522 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 581

Query: 436 SGCRREAKKIQSKI 449
            GC  EA ++  ++
Sbjct: 582 MGCVSEAFRLWDEM 595



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 158/310 (50%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+   + +A  +  + +  G + DVVTYN +++  C+         +   M E 
Sbjct: 434 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 493

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ PD  T+ +LI G +++  ++ ++ L + M++  + PDV +YN+L+    +  + ++ 
Sbjct: 494 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 553

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N ++ DMI   + P   ++ I++NG C       A R++  + + GF   ++T N ++KG
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C+AG    A   L  +   G  P+ ITY T++    +         +++ M+  G   D
Sbjct: 614 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F + GR++EA   M +M+  GV  D  +Y +LIN +  +  L+ A+ + D
Sbjct: 674 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 733

Query: 312 EMEKQGFECD 321
           EM ++GF  D
Sbjct: 734 EMLQRGFVPD 743


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 201/390 (51%), Gaps = 4/390 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK  +L+KA+  I     LGV P+VVTYN +I  +C    F     I   M+
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMK 278

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD  TYNS I+G  +   L  +  L+ +MLE G+ P+  +YN+L+      G  D
Sbjct: 279 DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLD 338

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A     +MI   +     T+N+ ++ L       +A  M + +++ G +P+ VT+NILI
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+ G  + A  +L E+   G  P  +TYT+++    +  + K    + S ++++G  
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLL 458

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  +I      G +  A   +++M    V  D ++YNTL+  YC+EGK+E A  L
Sbjct: 459 PDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQL 518

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LDEM+++G + D  ++  LI G  K G++K A    + M   GFD  +  YN ++  L K
Sbjct: 519 LDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCK 578

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMV 395
           + + +HA  + + M  K    D  TY S++
Sbjct: 579 NQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 203/428 (47%), Gaps = 4/428 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K NR + A  +  +  R+ +   + T+N++I+  C+          +  M  
Sbjct: 185 NQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMET 244

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTYN++I G         +  +   M + G+ PD ++YNS +  L + G+ +E
Sbjct: 245 LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEE 304

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +   M+ G L P   T+N +++G C     D A      +   G +  LVTYN+ I 
Sbjct: 305 ASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIH 364

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L   GR+  A  ++KE+ + G  P+A+T+  ++    R    K    +L  M  KG   
Sbjct: 365 ALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y ++I    K  R+KEA     ++  +G+  DI+ +N LI+ +C  G ++ A+ LL
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+      D+ T+  L+ G C+ G ++ AR  L+ M + G   +  +YN ++    K 
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  A  V + M          TY++++  LCK +    A +LL   +  G+    S  
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604

Query: 427 KAVVDGLR 434
            ++++ + 
Sbjct: 605 LSIIEAME 612



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 166/330 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  RLE+A  +I   +  G++P+ VTYN LID YC     D  Y   + M  
Sbjct: 290 NSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI   +VTYN  I        +  + +++ EM E G+ PD  ++N L++   + G    
Sbjct: 350 KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKR 409

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M+   + P   T+  ++  L K      A  +F  +Q+ G +P+++ +N LI 
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  G +  A  +LKE+ +    P+ ITY T+M+   R  K +   ++L  MKR+G   
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I+ + K G +K+A    ++M+T G    I++YN LI   CK  + E A  LL
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            EM  +G   D  T+  +I+ +    +++G
Sbjct: 590 KEMVSKGITPDDSTYLSIIEAMETVDDLEG 619



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 194/412 (47%), Gaps = 4/412 (0%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
            + +++L+ AYC+    +        ++E G  P++ T N +++   + +    +  L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM  M I   ++++N +++ L + GK  +A      M    + P   T+N +++G C   
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +F+ ++  G  P+  TYN  I GLCK GRL  A  ++ ++ + G  PNA+TY 
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++                  M  KG       Y   I A    GR+ +A + +++M   
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  D V++N LIN YC+ G  + A+ LLDEM  +G +    T+T LI  L K   +K A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
                 + + G   ++  +N ++D    +G ID A  + + M+    + D  TY++++  
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            C+  ++  A +LL    + G++    +   ++ G    G  ++A +++ ++
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 4/265 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +       R+  A+ +I +    G++PD VT+N+LI+ YC+       + +L+ M  
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVG 419

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
            GI P +VTY SLI    + + +  +  L  ++ + G+ PD+  +N+L+  HC    G  
Sbjct: 420 KGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHC--ANGNI 477

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A ++ ++M    + P   T+N ++ G C+    + A ++   +++ G  P+ ++YN L
Sbjct: 478 DRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTL 537

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K G ++ A  +  E+  +G  P  +TY  +++   +N++ +   E+L  M  KG 
Sbjct: 538 ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGI 597

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATD 273
           T D   Y ++I A   +  L+   D
Sbjct: 598 TPDDSTYLSIIEAMETVDDLEGNDD 622



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 78/142 (54%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   C    +++A  ++ +   + VLPD +TYN L+  YC+    +    +L+ M
Sbjct: 463 VFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEM 522

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  GI PD ++YN+LI+G ++   +  +  + DEM+  G  P + +YN+L+  L +  + 
Sbjct: 523 KRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEG 582

Query: 129 DEANRVFQDMICGDLTPCTATF 150
           + A  + ++M+   +TP  +T+
Sbjct: 583 EHAEELLKEMVSKGITPDDSTY 604


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 180/341 (52%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I V   CK+ R+  A  I+ D I  G  P+VVTYN LI+ +C+  + D    + N+M E 
Sbjct: 107 ILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN 166

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
             SPDV TYN LI G  +         LL EM++ G  P+  +YN+LM  L + GK  +A
Sbjct: 167 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 226

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + Q M+  D  P   TFN+M++  CK    D A  +F+ +   G +P++ TYNI+I G
Sbjct: 227 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 286

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C+A R+  AR +L+ + ++G  P+ +TY +I+    +  +     E+   ++  GY  D
Sbjct: 287 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 346

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
                T+I    K  RL +A   + +M  +G   D+V+Y  LI+ +CK  +L+ +     
Sbjct: 347 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 406

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           EM  +G      T++I+ID LCK+  ++   + L+ M + G
Sbjct: 407 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 193/407 (47%), Gaps = 5/407 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD +TY+ LI+ +C+   F   Y +L+ M + GI P    YN++I G   N  +  +L  
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +M +    P V +Y  L+  L +  +  +A+ + +DMI     P   T+N ++NG CK
Sbjct: 91  YRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ +F  + ++   P++ TYNILI G CK  R +    +L+E+   G  PN IT
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T+M    ++ KY     +   M R+      F +  +I  F K+G+L  A +  + M 
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   DI +YN +I+  C+  +++ A  LL+ M + G   D  T+  ++ GLCKA  + 
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A    E +   G+  ++   + ++D L K  ++D A  +   ME      D   Y+ ++
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           H  CKA +L  +       L  G          V+D L  S   R+ 
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 436



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 204/407 (50%), Gaps = 5/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA   ++A  ++ +  + G++P    YN +I   C     D+       M+    +P 
Sbjct: 43  FCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPS 101

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY  L+    +++ +S +  +L++M+E G  P+V +YN+L++   +LG  DEA  +F 
Sbjct: 102 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 161

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+    +P   T+NI+++G CK     +  ++ + + K+G  P  +TYN L+  L K+G
Sbjct: 162 QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  + + +      P+  T+  ++    +  +  L  E+   M  +G   D + Y 
Sbjct: 222 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 281

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I+   +  R+ +A   +E+M   G   D+V+YN++++  CK  +++ AY + + +   
Sbjct: 282 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG 341

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G+  D  T + LIDGLCK+  +  A   L  M + G   ++ AY  ++    K  ++D +
Sbjct: 342 GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKS 401

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  F  M     V    TYS ++  LCK+ R+     LL + L+ GV
Sbjct: 402 LAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 189/377 (50%), Gaps = 5/377 (1%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N L+ A+ +       Y +         SPD +TY++LI G  +      +  LLDEM +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            GI P    YN+++  L   G+ D A   ++DM      P   T+ I+++ LCK+    +
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A  +   + + G  P +VTYN LI G CK G +  A  +  ++ ++  +P+  TY  ++ 
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +  + + G ++L  M + G   +   Y T++ + VK G+  +A +  + M+    + 
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
              ++N +I+++CK G+L+ AY L   M  +G   D YT+ I+I G C+A  I  AR  L
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
           E M + G   ++  YN IV  L K  ++D A  V+E +       D  T S+++  LCK+
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 402 KRLPSASKLLLSCLKSG 418
           +RL  A KLL    ++G
Sbjct: 361 RRLDDAEKLLREMERNG 377



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 167/339 (49%), Gaps = 5/339 (1%)

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L+    +  K  EA  +F++ +CG  +P + T++ ++NG CK R    A R+   ++K
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G VP    YN +IKGLC  GR+ +A    +++     AP+ ITYT ++    ++ +   
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              IL  M   G   +   Y T+I  F K+G + EA     QM+ +    D+ +YN LI+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            YCK+ + +    LL EM K G E +  T+  L+D L K+G    A    + M +     
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +   +N ++D   K G++D A  +F+ M     + D +TY+ M+   C+A R+  A +LL
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
               ++G         ++V GL  +    EA ++   +R
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 209/399 (52%), Gaps = 12/399 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            CK  R  +AE ++ D I  G    PD+VTY+ L+  YC+    +    +L  +   G+ 
Sbjct: 55  LCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLR 114

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PD + Y  ++A   +++ L  +L+LL+EM+  G  P + ++N+L+    +    + A+ +
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            Q M    +     T+N +++GLCK      A ++   ++  G  P++V Y+  + GLCK
Sbjct: 175 LQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGF 253
           +G++  A  +L+++ DS H PN +TY TI+    ++ K    LE++  M    G   +  
Sbjct: 235 SGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           GY TV+    K+GR +EA   ME M   G + D+V+Y++L+N  CK GK+E A   + EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-----DSNLEAYNCIVDRLG 368
             +G + +  T+  L+ GLC  G +  A   +E M+  G        ++  YN ++  L 
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLC 414

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
           K G+ID A+  F+ M  +    D  +YS++V  L ++ R
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 218/440 (49%), Gaps = 12/440 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM- 68
            N  V  F K  R    E ++      G+ P+VV+YN L++  C+   +     ++  M 
Sbjct: 13  FNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72

Query: 69  -REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            R    +PD+VTY++L++G  +   +  S +LL E++  G+ PD   Y  +M  L +  +
Sbjct: 73  SRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSAR 132

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA  + ++MI     P   TFN +++G C+ +  + A  + + +   G   ++VTYN 
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNT 192

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GLCKAGRL+ A  +L+ +  SG AP+ + Y++ +    ++ K     ++L  M+   
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSD 252

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGKLEAA 306
           +  +   Y T++    K G++  A + MEQM + DG  L++V Y+T+++  CK G+ + A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +++ M + G   D  T++ L++GLCKAG I+ A   +  M   G   N   Y  +V  
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 367 LGKDGKIDHAINVFESMEVKDSF---------TYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           L   G++  A  + E M               TY++++  LCKA R+  A K        
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432

Query: 418 GVRILKSAQKAVVDGLRHSG 437
           G      +   +V+GL  SG
Sbjct: 433 GCDPDGVSYSTIVEGLARSG 452



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 183/356 (51%), Gaps = 7/356 (1%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   G PP+  ++N+L++   + G+P +  R+ + M    + P   ++N +L GLCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 163 TDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              A  + R +   G    P+LVTY+ L+ G CKAG++  +R +LKE+   G  P+A+ Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T +M    ++ +    LE+L  M R G       + T+I+   +   L+ A   ++ M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            GV+ D+V+YNTL++  CK G+L+ A  LL+ M+  G   D   ++  + GLCK+G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMV 395
           A   LE M     D N+  YN I+D L K GKID A+ + E M   D        YS++V
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             LCK  R   A  ++ +  ++G R       ++V+GL  +G   EA +   ++ M
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAM 356



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 197/385 (51%), Gaps = 7/385 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G  P+ VT+N+L+ G ++         LL+ M   GI P+V SYN L+  L +L +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 128 PDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
             EA  + +DMI   G  TP   T++ +L+G CK    + +  + + +   G  P+ + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             ++  LCK+ RL  A  +L+E+  +G  P  IT+ T++  C R +  ++   +L  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   Y T++    K GRL+EA   +E+M   G   D+V+Y++ +   CK GK+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLEAYNCIV 364
           A+ +L++M     + +  T+  ++DGLCK+G I  A   +E M +  G   N+  Y+ +V
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K G+   A +V E+M       D  TYSS+V+ LCKA ++  A + +      G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
                  ++V GL   G   EA+++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERM 385



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA RL++AE ++      G  PDVV Y+  +   C+       + +L +MR++   P+
Sbjct: 197 LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPN 256

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           VVTYN+++ G  ++  +  +L+++++M    G   +V  Y++++  L +LG+  EA  V 
Sbjct: 257 VVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVM 316

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M      P   T++ ++NGLCK    + A+   R +   G  P  VTY  L+ GLC  
Sbjct: 317 EAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSC 376

Query: 196 GRLRTARWILKELGDSG----HAPNAI-TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GRL  A  +++E+   G    H P ++ TY  ++    +  +    L+    M+ +G   
Sbjct: 377 GRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436

Query: 251 DGFGYCTVIAAFVKIGRLKEA 271
           DG  Y T++    + GR  +A
Sbjct: 437 DGVSYSTIVEGLARSGRALQA 457


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 222/444 (50%), Gaps = 9/444 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +      N  + A  +  D +   + P + T+ +++ A C     D+  ++L  M +
Sbjct: 180 NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTK 239

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ V Y +LI   ++ + ++ +L LL+EM  MG  PD  ++N ++  L +  + +E
Sbjct: 240 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 299

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M+    TP   T+  ++NGLCK    D A  +F  + K    P  V +N LI 
Sbjct: 300 AAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIH 355

Query: 191 GLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           G    GRL  A+ +L ++  S G  P+  TY +++   ++     L LE+L  M+ KG  
Sbjct: 356 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCK 415

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + + Y  ++  F K+G++ EA + + +M  DG++ + V +N LI+ +CKE ++  A  +
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 475

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM ++G + D YT   LI GLC+   IK A   L  M   G  +N   YN +++   +
Sbjct: 476 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I  A  +   M  +    D  TY+S++  LC+A  +  A  L    L+ G+     +
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              +++GL  SG   EA + Q ++
Sbjct: 596 CNILINGLCRSGMVEEAVEFQKEM 619



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 203/431 (47%), Gaps = 36/431 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA--------- 60
            N  +   CK +R+ +A  ++   +  G  PD +TY  L++  C+    DA         
Sbjct: 284 FNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 343

Query: 61  ------------GYTILNRMREA-----------GISPDVVTYNSLIAGATRNSLLSCSL 97
                       G+    R+ +A           GI PDV TYNSLI G  +  L+  +L
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++L +M   G  P+V+SY  L+    +LGK DEA  +  +M    L P T  FN +++  
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK      A+ +FR + + G  P++ T+N LI GLC+   ++ A W+L+++   G   N 
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY T++    R  + K   ++++ M  +G   D   Y ++I    + G + +A    E+
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+ DG+    +S N LIN  C+ G +E A     EM  +G   D  T   LI+GLC+AG 
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI-DHAINVFESME---VKDSFTYSS 393
           I+        +   G   +   YN ++  L K G + D  + + E +E   V +  T+S 
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSI 703

Query: 394 MVHNLCKAKRL 404
           ++ +L   + L
Sbjct: 704 LLQSLVPQETL 714



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 181/373 (48%), Gaps = 1/373 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           K ++ + N  +  F    RL+ A+A++ D +   G++PDV TYN LI  Y +        
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L  MR  G  P+V +Y  L+ G  +   +  + +LL+EM   G+ P+   +N L+   
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +  +  EA  +F++M      P   TFN +++GLC+     +AL + R +   G V   
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN LI    + G ++ AR ++ E+   G   + ITY +++K   R  +      +   
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M R G          +I    + G ++EA ++ ++MV  G   DIV++N+LIN  C+ G+
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +E    +  +++ +G   D  T+  L+  LCK G +  A L L+   + GF  N   ++ 
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSI 703

Query: 363 IVDRLGKDGKIDH 375
           ++  L     +D 
Sbjct: 704 LLQSLVPQETLDR 716



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 178/387 (45%), Gaps = 40/387 (10%)

Query: 103 MLEM----GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           MLEM       P   SYN ++  L        A  VF DM+   + P   TF +++  LC
Sbjct: 163 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALC 222

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                D+AL + R + KHG VP  V Y  LI  L K  R+  A  +L+E+   G  P+A 
Sbjct: 223 AVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 282

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGYC-------------------- 256
           T+  ++    +  +     ++++ M  +G+T D   +GY                     
Sbjct: 283 TFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI 342

Query: 257 ---------TVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAA 306
                    T+I  FV  GRL +A   +  MVT  G+  D+ +YN+LI  Y K+G +  A
Sbjct: 343 PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +L +M  +G + + Y++TIL+DG CK G I  A   L  M+  G   N   +NC++  
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K+ +I  A+ +F  M  K    D +T++S++  LC+   +  A  LL   +  GV   
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 +++     G  +EA+K+ +++
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEM 549



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 37/285 (12%)

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           T   L  + G QK G+      Y +LI  L   G  +T   +L ++ D G       + +
Sbjct: 87  TSMELFSWTGSQK-GYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFIS 145

Query: 223 IMK-----------------------CCFRNRKYKLGLEILSA-------------MKRK 246
           IM+                       C    + Y + LEIL +             M  +
Sbjct: 146 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR 205

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                 F +  V+ A   +  +  A   +  M   G   + V Y TLI+   K  ++  A
Sbjct: 206 KIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 265

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL+EM   G   D  T   +I GLCK   I  A   +  M   GF  +   Y  +++ 
Sbjct: 266 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNG 325

Query: 367 LGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           L K G++D A ++F  +    S  +++++H      RL  A  +L
Sbjct: 326 LCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVL 370


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 231/485 (47%), Gaps = 39/485 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +++   LNI +   CK  ++E  ++ + D    GV PDVVTYN LI+AYC+    +  + 
Sbjct: 94  QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 153

Query: 64  ILNRMREAGISPDVVTYNSLIAG--------------------------ATRNSLLS--C 95
           +++ M   G+ P V TYN++I G                          AT N LL   C
Sbjct: 154 LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECC 213

Query: 96  SLD-------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
             D       + DEM   G+ PD+ S+++L+  L + G  D+A + F+DM    L P   
Sbjct: 214 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            + I++ G C+N     AL++   + + G V ++VTYN ++ GLCK   L  A  +  E+
Sbjct: 274 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 333

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            + G  P+  T+TT++    ++      + +   M ++    D   Y T+I  F K   +
Sbjct: 334 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 393

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++  +    M++  +  + +SY  LIN YC  G +  A+ L DEM ++GFE    T   +
Sbjct: 394 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           + G C+AGN   A   L  M   G   +   YN +++   K+  +D A  +   ME    
Sbjct: 454 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 513

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           + D  TY+ +++   +  R+  A  ++L  ++ GV   +S   ++++G       +EA +
Sbjct: 514 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFR 573

Query: 445 IQSKI 449
           +  ++
Sbjct: 574 VHDEM 578



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 205/451 (45%), Gaps = 6/451 (1%)

Query: 9   LLNICVCTFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + ++ V T+ +A +L E  EA  +   + G+   +   N L+    +    D  + I   
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSK-GLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +  +G+  +V T N +I    +N  +  +   L +M E G+ PDV +YN+L++   + G 
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  +   M    L PC  T+N ++NGLCK      A  +   + K G  P+  TYNI
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+   C+   +  A  I  E+   G  P+ ++++ ++    +N      L+    MK  G
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  F + G + EA    ++M+  G  LD+V+YNT++N  CKE  L  A 
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM ++G   D YT T LI+G  K GN+  A    E M +     ++  YN ++D  
Sbjct: 328 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 387

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K  +++    ++  M  +    +  +Y  +++  C    +  A +L    ++ G     
Sbjct: 388 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 447

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                +V G   +G   +A +  S + +  I
Sbjct: 448 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 171/332 (51%), Gaps = 2/332 (0%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L++A     D    G+ PD V Y +LI  +C+         + + M E G   DVVTYN+
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 312

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++ G  +  +LS + +L  EM E G+ PD +++ +L++   + G  ++A  +F+ MI  +
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L P   T+N +++G CK    +    ++  +      P  ++Y ILI G C  G +  A 
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  E+ + G     IT  TI+K   R        E LS M  KG   DG  Y T+I  F
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
           +K   +  A   + +M   G+  D+++YN ++N + ++G+++ A L++ +M ++G   D+
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552

Query: 323 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
            T+T LI+G     N+K A R+H E + + GF
Sbjct: 553 STYTSLINGHVTQNNLKEAFRVHDEMLQR-GF 583



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 195/434 (44%), Gaps = 6/434 (1%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            +R+E  E++++     G  P  + +++L+  Y Q      G      ++  G+   +  
Sbjct: 7   VSRVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 64

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
            NSL+ G  +   +  + ++  E++  G+  +V++ N +++ L +  K +       DM 
Sbjct: 65  CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 124

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P   T+N ++N  C+    + A  +   +   G  P + TYN +I GLCK G+  
Sbjct: 125 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 184

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A+ +L E+   G +P+  TY  ++  C RN        I   M  +G   D   +  +I
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               K G L +A  Y   M   G+  D V Y  LI  +C+ G +  A  + DEM +QG  
Sbjct: 245 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 304

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+  +++GLCK   +  A      M + G   +   +  +++   KDG ++ A+ +
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           FE M  +    D  TY++++   CK   +   ++L    +   +     +   +++G  +
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 424

Query: 436 SGCRREAKKIQSKI 449
            GC  EA ++  ++
Sbjct: 425 MGCVSEAFRLWDEM 438



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 158/310 (50%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+   + +A  +  + +  G + DVVTYN +++  C+         +   M E 
Sbjct: 277 ILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ PD  T+ +LI G +++  ++ ++ L + M++  + PDV +YN+L+    +  + ++ 
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 396

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N ++ DMI   + P   ++ I++NG C       A R++  + + GF   ++T N ++KG
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 456

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C+AG    A   L  +   G  P+ ITY T++    +         +++ M+  G   D
Sbjct: 457 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F + GR++EA   M +M+  GV  D  +Y +LIN +  +  L+ A+ + D
Sbjct: 517 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 576

Query: 312 EMEKQGFECD 321
           EM ++GF  D
Sbjct: 577 EMLQRGFVPD 586


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 204/441 (46%), Gaps = 39/441 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   ++++AE I+      G  PD  TY  LI  +C+  + D  + + +RM 
Sbjct: 205 FNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMV 264

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-------------------- 109
           + G  P+ VTY++LI G      L  ++D+L+EM++ GI                     
Sbjct: 265 KDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSC 324

Query: 110 ---------------PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
                          P+V +Y +L+  L + GK + A  V+  M+   L P   T++ ++
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N L      + AL +F  +  H  +P   TYN++IKG C  G ++ A  I  ++  +G +
Sbjct: 385 NQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS 444

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN ITY  I+   F+       + +L  MK  G   D + Y  +I+ F + G+L+ A   
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +MV  G+  ++V+YN +IN Y    K++ A  L  +M + G      T+ ++I G  K
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----T 390
              I  A      M K G   N+  Y   +D L K+G+   A  +F  M+ +D F    T
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624

Query: 391 YSSMVHNLCKAKRLPSASKLL 411
           YSS++  LC+  +   A +LL
Sbjct: 625 YSSLIDGLCQEGQAEDAERLL 645



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 204/426 (47%), Gaps = 4/426 (0%)

Query: 29  IIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           + I+ +  G+ P++ T+N +I   C          I+  +   G  PD  TY SLI G  
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           +N  L  + ++ D M++ G  P+  +Y++L++ L   G+ +EA  + ++MI   + P   
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            + I +  LC    +  A+++   ++K G  P + TY  LI GL + G+   A  +  ++
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  P A+TY+ ++   +   +++  L I   M       +   Y  +I  F  IG +
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++AT   +QM+  G   ++++YN +I++Y K+G +  A  LL+ M+  G + D +T+  L
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESME 384
           I G  + G ++ A      M + G   N+  YN I++      K+D A+ +F    ES  
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           V  S TY+ M+    K  R+  A       +K G+        + +DGL  +G    A K
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFK 608

Query: 445 IQSKIR 450
           I  +++
Sbjct: 609 IFHEMK 614



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 221/471 (46%), Gaps = 53/471 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT-----ILNRMREA 71
            C   RLE+A  ++ + I  G+ P V  Y + I + C     DAG +     +L +M++ 
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLC-----DAGRSCEAVKLLGKMKKR 336

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P+V TY +LI+G +R+     ++ +  +ML  G+ P   +Y++L++ L+  G+ + A
Sbjct: 337 GCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETA 396

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI---- 187
             +F+ M+  D  P T T+N+++ G C   Y   A  +F  + K G  P ++TYNI    
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHI 456

Query: 188 -------------------------------LIKGLCKAGRLRTARWILKELGDSGHAPN 216
                                          LI G  + G+L  A  +  E+ + G +PN
Sbjct: 457 YFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  I+       K    L +   M   G       Y  +I+ F K  R+ EA ++  
Sbjct: 517 VVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCG 576

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G+  ++++Y + I+  CK G+   A+ +  EM+K+ +  +  T++ LIDGLC+ G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
             + A    E +   G + N++ Y  +V  L   G+   A  + ESM+ K        Y 
Sbjct: 637 QAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR 692

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           +++   CK   + SA K+  S + +G +   S  KA++  L  +  R++A+
Sbjct: 693 ALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 204/436 (46%), Gaps = 19/436 (4%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N+ +  FC    ++KA AI    ++ G  P+V+TYN++I  Y +    +    +L
Sbjct: 411 NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL 470

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+  D  TY +LI+G +R   L  +  L +EM+E GI P+V +YN++++    +
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTV 530

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            K D+A  +F  M+     P + T+N+M++G  K      A      + K G +P ++TY
Sbjct: 531 AKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITY 590

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
              I GLCK GR   A  I  E+    + PN  TY++++    +  + +    +L     
Sbjct: 591 TSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD---- 646

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   +   Y T++      GR  EA   +E M   G+Q     Y  L+   CK  ++E+
Sbjct: 647 DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVES 706

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  + D M   GF+     +  LI  LCKA   + A+   + M K  ++S+   +  ++D
Sbjct: 707 ALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLD 766

Query: 366 RLGKDGKIDHAINVFESMEVKD---SFTYSSMVHNLCKAK----RLPSASKLLLSCLKSG 418
            L K+G+ D ++ +   ME ++   +F    M+     A      +P  SK L       
Sbjct: 767 GLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQL------- 819

Query: 419 VRILKSAQKAVVDGLR 434
             I+K  QK   D LR
Sbjct: 820 -GIVKEKQKQTADVLR 834



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 165/362 (45%), Gaps = 48/362 (13%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL T      +  F +  +LE A ++  + +  G+ P+VVTYN +I+ Y      D    
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M E+G  P   TYN +I+G ++ + +S + +   +M++ G+ P+V +Y S +  L 
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+   A ++F +M   D  P   T++ +++GLC+    ++A R+       G  P + 
Sbjct: 599 KNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVD 654

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L++GLC  GR   A  +++ +   G  P+   Y  ++    +N      LE+ SA+
Sbjct: 655 TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN------LEVESAL 708

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K     FD                          MVT G Q  +  Y  LI   CK    
Sbjct: 709 K----IFD-------------------------SMVTTGFQPCLSDYKALICALCKANFR 739

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  +   M K+ +  D+   T+L+DGL K G      L LE ++       +E+ NC 
Sbjct: 740 QKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGE---TDLSLELLHV------MESRNCT 790

Query: 364 VD 365
           ++
Sbjct: 791 LN 792



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 156/363 (42%), Gaps = 45/363 (12%)

Query: 112 VWSYNSLMHCLFQLGKPDE---ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           ++S+++L   L QLGK D       V+ +M+   + P   TFN M+  LC       A  
Sbjct: 167 LYSFSTL---LIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAEL 223

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CC 227
           +   +  +G  P+  TY  LI G CK G L  A  +   +   G  PN++TY+ ++   C
Sbjct: 224 IMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLC 283

Query: 228 FRNR---------------------KYKL-------------GLEILSAMKRKGYTFDGF 253
              R                      Y +              +++L  MK++G   +  
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQ 343

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I+   + G+ + A     +M+ DG+    V+Y+ LIN    EG+ E A  + + M
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
                  +  T+ ++I G C  G I+ A    + M K G   N+  YN I+    K G +
Sbjct: 404 LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           ++A+ + E M+      D++TY++++    +  +L  A  L    ++ G+        A+
Sbjct: 464 NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAI 523

Query: 430 VDG 432
           ++G
Sbjct: 524 ING 526


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 219/444 (49%), Gaps = 4/444 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L +A ++      +G LPDVVT+N LID Y +    D    ++  MR
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G   DVVTYN+LI    +   +  +      M   G+  +V ++++ +    + G   
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F  M    +     T+  +++G CK    D+A+ +   + + G    +VTY +L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  ++  A  +L+ +  +G   N + YTT++   F N+  +  L +LS MK KG  
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I     + +L EA   + +M   G++ + + Y T+++   K GK+  A  +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L ++   GF+ +  T+  LIDGLCKAG+I  A  H   M  +G D N++AY  +VD L K
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G ++ A+ +F  M  K    D   Y++++    K   L  A  L    + SG+++    
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
               + G  +     EA+++ S++
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEM 634



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 4/391 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D    ++ R+ E   +P+V T+N +I    +   L+ +  L   M EMG  PDV ++NSL
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +    + G+ DE  ++ ++M          T+N ++N  CK    + A   F  +++ G 
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           +  +VT++  +   CK G +R A  +  ++   G A N  TYT ++    +  +    + 
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M R+G   +   Y  ++    K  ++ EA D +  M   GV+ + + Y TLI+ + 
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
                E A  LL EM+ +G E D   +  LI GLC    +  A+  L  M++ G + N  
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 359 AYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D   K GK+  AI     + +S    +  TY +++  LCKA  +  A       
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              G+     A  A+VDGL  +GC  EA ++
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 43/409 (10%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           ++L++      LL  ++  +  + E+ +PP+  + N   H L +L + D + R+ + +  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCN---HILLRLAR-DRSGRLVRRLFE 181

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P   TFNI+++ LCK      A  +F  +++ G +P++VT+N LI G  K G L  
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              +++E+  SG   + +TY  ++ C  +  + +      +AMKR+G   +   + T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           AF K G ++EA     QM   G+ L+  +Y  LI+  CK G+L+ A +LLDEM +QG   
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  T+T+L+DGLCK   +  A   L  M K G  +N   Y  ++     +   + A+ + 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL-------------------SCLKS 417
             M+ K    D   Y +++  LC   +L  A  LL                    +C KS
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 418 G---------VRILKSAQK-------AVVDGLRHSGCRREAKKIQSKIR 450
           G          +IL S  +       A++DGL  +G   EA    +K+R
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 35/333 (10%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA RL+ A  ++ + +R GV  +VVTY +L+D  C+         +L  M +AG+  + 
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 78  VTYNSLIAGATRN-------SLLS---------------------CSLDLLDE------- 102
           + Y +LI G   N        LLS                     C++  LDE       
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M E G+ P+   Y ++M   F+ GK  EA  + Q ++     P   T+  +++GLCK   
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D A+  F  ++  G  P +  Y  L+ GLCK G L  A  +  E+   G + + + YT 
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +         + + M   G   D F Y   I+ F  +  + EA +   +M+  G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           +  D   YN LI+ Y K G LE A  L DEME+
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 5/233 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   L    +   C  ++L++A++++      G+ P+ + Y  ++DA  +         
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L ++ ++G  P+V+TY +LI G  +   +  ++   ++M ++G+ P+V +Y +L+  L 
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLC 549

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  +EA ++F +M+   ++     +  +L+G  K     +A  +   +   G   +L 
Sbjct: 550 KNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLF 609

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
            Y   I G C    +  AR +  E+   G AP+   Y      C  ++  KLG
Sbjct: 610 CYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYN-----CLISKYQKLG 657



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +T  I+ID LCK G +  AR     M ++G   ++  +N ++D  GK G++D    + E 
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M       D  TY+++++  CK  R+ +A     +  + GV          VD     G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 439 RREAKKIQSKIRM 451
            REA K+ +++R+
Sbjct: 309 VREAMKLFAQMRV 321


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 8/408 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  +   A +++   ++LG  PD  T+N LI              +++RM 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PDVVTYNS++ G  R+   S +LDLL +M E  +  DV++Y++++  L + G  D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  +F++M    +     T+N ++ GLCK  ++ D AL + + +     VP ++T+N+L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVL 304

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKG 247
           +    K G+L+ A  + KE+   G +PN ITY T+M   C +NR  +    +L  M R  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NMLDLMVRNK 363

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + D   + ++I  +  + R+ +       +   G+  + V+Y+ L+  +C+ GK++ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D  T+ IL+DGLC  G ++ A    E + K   D  +  Y  I++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            K GK++ A N+F S+  K    +  TY+ M+  LCK   L  A+ LL
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 212/417 (50%), Gaps = 4/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  ++ T N++I+ +C+       Y++L ++ + G  PD  T+N+LI G      +S +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+E G  PDV +YNS+++ + + G    A  + + M   ++     T++ +++ 
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC++   D A+ +F+ ++  G    +VTYN L++GLCKAG+      +LK++      PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++    +  K +   E+   M  +G + +   Y T++  +    RL EA + ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV +    DIV++ +LI  YC   +++    +   + K+G   +  T++IL+ G C++G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
            IK A    + M   G   ++  Y  ++D L  +GK++ A+ +FE ++          Y+
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +++  +CK  ++  A  L  S    GV+        ++ GL   G   EA  +  K+
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 208/416 (50%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           ++ +A  ++   +  G  PDVVTYN +++  C+         +L +M E  +  DV TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           ++I    R+  +  ++ L  EM   GI   V +YNSL+  L + GK ++   + +DM+  
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           ++ P   TFN++L+   K      A  +++ +   G  P ++TYN L+ G C   RL  A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L  +  +  +P+ +T+T+++K     ++   G+++   + ++G   +   Y  ++  
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F + G++K A +  ++MV+ GV  D+++Y  L++  C  GKLE A  + ++++K   +  
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
              +T +I+G+CK G ++ A      +   G   N+  Y  ++  L K G +  A  +  
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ME      +  TY++++    +   L +++KL+      G     S+ K V+D L
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 181/354 (51%), Gaps = 11/354 (3%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F ++ T+ +   V T+       CKA +      ++ D +   ++P+V+T+N+L+D + 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         +   M   GISP+++TYN+L+ G    + LS + ++LD M+     PD+ 
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           ++ SL+     + + D+  +VF+++    L     T++I++ G C++     A  +F+ +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
             HG +P+++TY IL+ GLC  G+L  A  I ++L  S      + YTTI++   +  K 
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +    +  ++  KG   +   Y  +I+   K G L EA   + +M  DG   +  +YNTL
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           I  + ++G L A+  L++EM+  GF  D  +  ++ID L  A      RL L Y
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK----RLTLRY 599



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +FQ+MI     P    F+   + + + +  +  L   + L+ +G    + T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +   A  +L ++   G+ P+  T+ T++K  F   K    + ++  M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y +++    + G    A D + +M    V+ D+ +Y+T+I+  C++G ++AA
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EME +G +    T+  L+ GLCKAG      L L+ M       N+  +N ++D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K+GK+  A  +++ M  +    +  TY++++   C   RL  A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 95/197 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V  FC++ +++ AE +  + +  GVLPDV+TY +L+D  C     +    I   +++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + +   +V Y ++I G  +   +  + +L   +   G+ P+V +Y  ++  L + G   E
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN + + M      P   T+N ++    ++     + ++   ++  GF  +  +  ++I 
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586

Query: 191 GLCKAGRLRTARWILKE 207
            L  A +  T R+ L +
Sbjct: 587 MLLSAMKRLTLRYCLSK 603


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 20/452 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  V  FC+A  L+ AE ++      G   P++VT+N +++  C+    +    + + M 
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++PDVV+YN+L++G  +   L  SL +  EM + G+ PDV ++ SL+H   + G  +
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 310

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +   M    L     TF  +++G CK  + D+AL     ++K G  P +V YN LI
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GR+  AR +++E+      P+ +TY+TI+    +        ++   M +KG  
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I    +  RL +A +  E M+  GVQ D  +Y TLI+ +CKEG +E A  L
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 490

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-----RLHLE--YMNKIGFD-------- 354
            DEM ++G   D  T+++LI+GL K+   K A     +L+ E    + I +D        
Sbjct: 491 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           +  ++   ++      G +  A  V++SM  +    D   YS ++H  C+   +  A   
Sbjct: 551 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSF 610

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               L+SG     ++  ++V GL   G   EA
Sbjct: 611 HKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 209/395 (52%), Gaps = 5/395 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L  A   +   +R GV P+V TYN+L+ A C     +    ++  MR AG +P+ VTYN+
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           L+A   R   L  +  ++  M E G   P++ ++NS+++ L + G+ + A +VF +M+  
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            L P   ++N +L+G CK      +L +F  + + G VP++VT+  LI   CKAG L  A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             ++ ++ + G   N +T+T ++    +       L  +  M++ G       Y  +I  
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           + K+GR+  A + + +M    V+ D+V+Y+T+I+ YCK G L++A+ L  +M K+G   D
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T++ LI GLC+   +  A    E M ++G   +   Y  ++D   K+G ++ A+++ +
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
            M  K    D  TYS +++ L K+ R   A +LL 
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 210/418 (50%), Gaps = 6/418 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P V  YN ++ A     S  +    L+ M   G++P+V TYN L+        L  +
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLN 155
           + ++ +M   G  P+  +YN+L+    + G+ D A RV   M   G+  P   TFN M+N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK    + A ++F  + + G  P++V+YN L+ G CK G L  +  +  E+   G  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+T+++    +    +  + +++ M+ +G   +   +  +I  F K G L +A   +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M   G+Q  +V YN LIN YCK G+++ A  L+ EME +  + D  T++ +I G CK 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
           GN+  A    + M K G   +   Y+ ++  L ++ +++ A  +FE+M       D FTY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++++   CK   +  A  L    ++ GV         +++GL  S   +EA ++  K+
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 198/393 (50%), Gaps = 6/393 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           ++ LI +Y            L     AG +P V  YN+++   +  SL S +   L  ML
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPS-ARRFLSSML 144

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ P+V++YN L+  L   G+ +EA  V  DM      P   T+N ++   C+    D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 165 NALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
            A R+   +++ G   P LVT+N ++ GLCKAGR+  AR +  E+   G AP+ ++Y T+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +       L + S M ++G   D   + ++I A  K G L++A   + QM   G+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +++ V++  LI+ +CK+G L+ A L ++EM K G +     +  LI+G CK G +  AR 
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            +  M       ++  Y+ I+    K G +D A  + + M  K    D+ TYSS++  LC
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + KRL  A +L  + L+ GV+  +     ++DG
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 477



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   L ++ A+  +  + G++PDVVT+  LI A C+  + +    ++ +MRE
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + VT+ +LI G  +   L  +L  ++EM + GI P V  YN+L++   +LG+ D 
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    + P   T++ +++G CK    D+A ++ + + K G +P+ +TY+ LI+
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+  RL  A  + + +   G  P+  TYTT++    +    +  L +   M RKG   
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501

Query: 251 DGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDGVQLDIV----------SYNTLIN 295
           D   Y  +I    K  R KEA       Y E  V D ++ D +          S   L+ 
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 561

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            +C +G ++ A  +   M  + ++ D   ++ILI G C+ GN++ A    + M + GF  
Sbjct: 562 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESM 383
           N  +   +V  L ++G +  A N  + +
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 19/325 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R++ A  +I +     V PDVVTY+ +I  YC+  + D+ + +  +M +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
            G+ PD +TY+SLI G      L+ + +L + ML++G+ PD ++Y +L+  HC  + G  
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC--KEGNV 484

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +  +MI   + P   T+++++NGL K+  T  A R+   L     VP+ + Y+ L
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544

Query: 189 ---------------IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
                          +KG C  G ++ A  + + + D     +   Y+ ++    R    
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +  L     M R G++ +     +++    + G + EA + ++ ++T     D  +   L
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGF 318
           I+L  KEG ++A   +L  M + G 
Sbjct: 665 IDLNRKEGNVDALIDVLCGMARDGL 689


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 219/444 (49%), Gaps = 4/444 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L +A ++      +G LPDVVT+N LID Y +    D    ++  MR
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G   DVVTYN+LI    +   +  +      M   G+  +V ++++ +    + G   
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F  M    +     T+  +++G CK    D+A+ +   + + G    +VTY +L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  ++  A  +L+ +  +G   N + YTT++   F N+  +  L +LS MK KG  
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I     + +L EA   + +M   G++ + + Y T+++   K GK+  A  +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L ++   GF+ +  T+  LIDGLCKAG+I  A  H   M  +G D N++AY  +VD L K
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G ++ A+ +F  M  K    D   Y++++    K   L  A  L    + SG+++    
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
               + G  +     EA+++ S++
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEM 634



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 4/391 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D    ++ R+ E   +P+V T+N +I    +   L+ +  L   M EMG  PDV ++NSL
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +    + G+ DE  ++ ++M          T+N ++N  CK    + A   F  +++ G 
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           +  +VT++  +   CK G +R A  +  ++   G A N  TYT ++    +  +    + 
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M R+G   +   Y  ++    K  ++ EA D +  M   GV+ + + Y TLI+ + 
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
                E A  LL EM+ +G E D   +  LI GLC    +  A+  L  M++ G + N  
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYI 469

Query: 359 AYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D   K GK+  AI     + +S    +  TY +++  LCKA  +  A       
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              G+     A  A+VDGL  +GC  EA ++
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 43/409 (10%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           ++L++      LL  ++  +  + E+ +PP+  + N   H L +L + D + R+ + +  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCN---HILLRLAR-DRSGRLVRRLFE 181

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P   TFNI+++ LCK      A  +F  +++ G +P++VT+N LI G  K G L  
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              +++E+  SG   + +TY  ++ C  +  + +      +AMKR+G   +   + T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           AF K G ++EA     QM   G+ L+  +Y  LI+  CK G+L+ A +LLDEM +QG   
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  T+T+L+DGLCK   +  A   L  M K G  +N   Y  ++     +   + A+ + 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL-------------------SCLKS 417
             M+ K    D   Y +++  LC   +L  A  LL                    +C KS
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 418 G---------VRILKSAQK-------AVVDGLRHSGCRREAKKIQSKIR 450
           G          +IL S  +       A++DGL  +G   EA    +K+R
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 35/333 (10%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA RL+ A  ++ + +R GV  +VVTY +L+D  C+         +L  M +AG+  + 
Sbjct: 339 CKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398

Query: 78  VTYNSLIAGATRN-------SLLS---------------------CSLDLLDE------- 102
           + Y +LI G   N        LLS                     C++  LDE       
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M E G+ P+   Y ++M   F+ GK  EA  + Q ++     P   T+  +++GLCK   
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D A+  F  ++  G  P +  Y  L+ GLCK G L  A  +  E+   G + + + YT 
Sbjct: 519 IDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTA 578

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +         + + M   G   D F Y   I+ F  +  + EA +   +M+  G
Sbjct: 579 LLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG 638

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           +  D   YN LI+ Y K G LE A  L DEME+
Sbjct: 639 IAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 106/220 (48%), Gaps = 5/220 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  ++L++A++++      G+ P+ + Y  ++DA  +         +L ++ ++G  P+
Sbjct: 443 LCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TY +LI G  +   +  ++   ++M ++G+ P+V +Y +L+  L + G  +EA ++F 
Sbjct: 503 VITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFN 562

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   ++     +  +L+G  K     +A  +   +   G   +L  Y   I G C   
Sbjct: 563 EMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLN 622

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
            +  AR +  E+   G AP+   Y      C  ++  KLG
Sbjct: 623 MMPEAREVFSEMIGHGIAPDRAVYN-----CLISKYQKLG 657



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +T  I+ID LCK G +  AR     M ++G   ++  +N ++D  GK G++D    + E 
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M       D  TY+++++  CK  R+ +A     +  + GV          VD     G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 439 RREAKKIQSKIRM 451
            REA K+ +++R+
Sbjct: 309 VREAMKLFAQMRV 321


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 8/408 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  +   A +++   ++LG  PD  T+N LI              +++RM 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PDVVTYNS++ G  R+   S +LDLL +M E  +  DV++Y++++  L + G  D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  +F++M    +     T+N ++ GLCK  ++ D AL + + +     VP ++T+N+L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVL 304

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKG 247
           +    K G+L+ A  + KE+   G +PN ITY T+M   C +NR  +    +L  M R  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NMLDLMVRNK 363

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + D   + ++I  +  + R+ +       +   G+  + V+Y+ L+  +C+ GK++ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D  T+ IL+DGLC  G ++ A    E + K   D  +  Y  I++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            K GK++ A N+F S+  K    +  TY+ M+  LCK   L  A+ LL
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 212/418 (50%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  ++ T N++I+ +C+       Y++L ++ + G  PD  T+N+LI G      +S +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+E G  PDV +YNS+++ + + G    A  + + M   ++     T++ +++ 
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC++   D A+ +F+ ++  G    +VTYN L++GLCKAG+      +LK++      PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++    +  K +   E+   M  +G + +   Y T++  +    RL EA + ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV +    DIV++ +LI  YC   +++    +   + K+G   +  T++IL+ G C++G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
            IK A    + M   G   ++  Y  ++D L  +GK++ A+ +FE ++          Y+
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++  +CK  ++  A  L  S    GV+        ++ GL   G   EA  +  K+ 
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 208/416 (50%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           ++ +A  ++   +  G  PDVVTYN +++  C+         +L +M E  +  DV TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           ++I    R+  +  ++ L  EM   GI   V +YNSL+  L + GK ++   + +DM+  
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           ++ P   TFN++L+   K      A  +++ +   G  P ++TYN L+ G C   RL  A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L  +  +  +P+ +T+T+++K     ++   G+++   + ++G   +   Y  ++  
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F + G++K A +  ++MV+ GV  D+++Y  L++  C  GKLE A  + ++++K   +  
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
              +T +I+G+CK G ++ A      +   G   N+  Y  ++  L K G +  A  +  
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ME      +  TY++++    +   L +++KL+      G     S+ K V+D L
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 185/361 (51%), Gaps = 1/361 (0%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C+   ++ A ++  +    G+   VVTYN L+   C+   ++ G  +L  M    I P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V+T+N L+    +   L  + +L  EM+  GI P++ +YN+LM       +  EAN + 
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+    +P   TF  ++ G C  +  D+ +++FR + K G V   VTY+IL++G C++
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+++ A  + +E+   G  P+ +TY  ++     N K +  LEI   +++         Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    K G++++A +    +   GV+ ++++Y  +I+  CK+G L  A +LL +ME+
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   +  T+  LI    + G++  +   +E M   GF ++  +   ++D L   G++D 
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDK 595

Query: 376 A 376
           +
Sbjct: 596 S 596



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 176/339 (51%), Gaps = 7/339 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F ++ T+ +   V T+       CKA +      ++ D +   ++P+V+T+N+L+D + 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         +   M   GISP+++TYN+L+ G    + LS + ++LD M+     PD+ 
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           ++ SL+     + + D+  +VF+++    L     T++I++ G C++     A  +F+ +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
             HG +P+++TY IL+ GLC  G+L  A  I ++L  S      + YTTI++   +  K 
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +    +  ++  KG   +   Y  +I+   K G L EA   + +M  DG   +  +YNTL
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           I  + ++G L A+  L++EM+  GF  D  +  ++ID L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +FQ+MI     P    F+   + + + +  +  L   + L+ +G    + T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +   A  +L ++   G+ P+  T+ T++K  F   K    + ++  M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y +++    + G    A D + +M    V+ D+ +Y+T+I+  C++G ++AA
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EME +G +    T+  L+ GLCKAG      L L+ M       N+  +N ++D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K+GK+  A  +++ M  +    +  TY++++   C   RL  A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C  NRL +A  ++   +R    PD+VT+  LI  YC     D G  +   + + G+  +
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY+ L+ G  ++  +  + +L  EM+  G+ PDV +Y  L+  L   GK ++A  +F+
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462

Query: 137 DM-----------------------------------ICGDLTPCTATFNIMLNGLCKNR 161
           D+                                    C  + P   T+ +M++GLCK  
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  + R +++ G  P   TYN LI+   + G L  +  +++E+   G + +A +  
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++         K  L++LS
Sbjct: 583 MVIDMLLSGELDKSFLDMLS 602


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 20/452 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  V  FC+A  L+ AE ++      G   P++VT+N +++  C+    +    + + M 
Sbjct: 49  NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 108

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++PDVV+YN+L++G  +   L  SL +  EM + G+ PDV ++ SL+H   + G  +
Sbjct: 109 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 168

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +   M    L     TF  +++G CK  + D+AL     ++K G  P +V YN LI
Sbjct: 169 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 228

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GR+  AR +++E+      P+ +TY+TI+    +        ++   M +KG  
Sbjct: 229 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 288

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I    +  RL +A +  E M+  GVQ D  +Y TLI+ +CKEG +E A  L
Sbjct: 289 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 348

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-----RLHLE--YMNKIGFD-------- 354
            DEM ++G   D  T+++LI+GL K+   K A     +L+ E    + I +D        
Sbjct: 349 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 408

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           +  ++   ++      G +  A  V++SM  +    D   YS ++H  C+   +  A   
Sbjct: 409 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSF 468

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               L+SG     ++  ++V GL   G   EA
Sbjct: 469 HKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 206/384 (53%), Gaps = 5/384 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R GV P+V TYN+L+ A C     +    ++  MR AG +P+ VTYN+L+A   R   L
Sbjct: 2   VRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 61

Query: 94  SCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
             +  ++  M E G   P++ ++NS+++ L + G+ + A +VF +M+   L P   ++N 
Sbjct: 62  DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 121

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L+G CK      +L +F  + + G VP++VT+  LI   CKAG L  A  ++ ++ + G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              N +T+T ++    +       L  +  M++ G       Y  +I  + K+GR+  A 
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           + + +M    V+ D+V+Y+T+I+ YCK G L++A+ L  +M K+G   D  T++ LI GL
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C+   +  A    E M ++G   +   Y  ++D   K+G ++ A+++ + M  K    D 
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361

Query: 389 FTYSSMVHNLCKAKRLPSASKLLL 412
            TYS +++ L K+ R   A +LL 
Sbjct: 362 VTYSVLINGLSKSARTKEAHRLLF 385



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 198/387 (51%), Gaps = 5/387 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++P+V TYN L+        L  ++ ++ +M   G  P+  +YN+L+    + G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 128 PDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
            D A RV   M   G+  P   TFN M+NGLCK    + A ++F  + + G  P++V+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK G L  +  +  E+   G  P+ +T+T+++    +    +  + +++ M+ +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   +  +I  F K G L +A   +E+M   G+Q  +V YN LIN YCK G+++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L+ EME +  + D  T++ +I G CK GN+  A    + M K G   +   Y+ ++  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 367 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L ++ +++ A  +FE+M       D FTY++++   CK   +  A  L    ++ GV   
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 +++GL  S   +EA ++  K+
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKL 387



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   L ++ A+  +  + G++PDVVT+  LI A C+  + +    ++ +MRE
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + VT+ +LI G  +   L  +L  ++EM + GI P V  YN+L++   +LG+ D 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    + P   T++ +++G CK    D+A ++ + + K G +P+ +TY+ LI+
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+  RL  A  + + +   G  P+  TYTT++    +    +  L +   M RKG   
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 359

Query: 251 DGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDGVQLDIV----------SYNTLIN 295
           D   Y  +I    K  R KEA       Y E  V D ++ D +          S   L+ 
Sbjct: 360 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 419

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            +C +G ++ A  +   M  + ++ D   ++ILI G C+ GN++ A    + M + GF  
Sbjct: 420 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 479

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESM 383
           N  +   +V  L ++G +  A N  + +
Sbjct: 480 NSTSTISLVRGLFEEGMVVEADNAIQDL 507



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 15/323 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R++ A  +I +     V PDVVTY+ +I  YC+  + D+ + +  +M +
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 284

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD +TY+SLI G      L+ + +L + ML++G+ PD ++Y +L+    + G  ++
Sbjct: 285 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 344

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL-- 188
           A  +  +MI   + P   T+++++NGL K+  T  A R+   L     VP+ + Y+ L  
Sbjct: 345 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 404

Query: 189 -------------IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
                        +KG C  G ++ A  + + + D     +   Y+ ++    R    + 
Sbjct: 405 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRK 464

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            L     M R G++ +     +++    + G + EA + ++ ++T     D  +   LI+
Sbjct: 465 ALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 524

Query: 296 LYCKEGKLEAAYLLLDEMEKQGF 318
           L  KEG ++A   +L  M + G 
Sbjct: 525 LNRKEGNVDALIDVLCGMARDGL 547


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 210/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            C+  R+ +A A++   +  G+ P+ +TY  ++D  C+     +   +L +M E + I P
Sbjct: 188 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP 247

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I G  ++   S + +L  EM E GI PD+++YN ++      G+  EA R+ 
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   + P   T++ ++N   K R    A  ++  +   G +P  +TYN +I G CK 
Sbjct: 308 QEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQ 367

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +P+  T+ T++      ++   G E+L  M   G   D   Y
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTY 427

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D  +QM++ GV  DIV+ NTL++  C  GKL+ A  +   M+K
Sbjct: 428 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 487

Query: 316 -----------QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    + M   G   N   Y+ ++
Sbjct: 488 SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L K  ++D A  +F+SM  K    D  T++++V   CKA R+    +L     + G+ 
Sbjct: 548 NGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIV 607

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 608 ADAITYITLIHGFRKVG 624



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 208/443 (46%), Gaps = 9/443 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP V+ +N L+    +    D   ++  +M    I  D
Sbjct: 52  FHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCD 111

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V ++N LI      S L  +L    ++ ++G  PDV ++++L+H L    +  EA  +F 
Sbjct: 112 VYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFH 171

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 172 QMC----RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+   +++ ++     + + M+ KG   D F Y
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I  F   GR  EA   +++M+   +  ++V+Y+ LIN Y KE K   A  L DEM  
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T+  +IDG CK   +  A      M   G   ++  +N ++D      +ID 
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
              +   M     V D+ TY++++H  C    L +A  L    + SGV         ++D
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467

Query: 432 GLRHSGCRREAKKIQSKIRMAKI 454
           GL  +G  ++A ++   ++ +K+
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKM 490



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 158/309 (51%), Gaps = 11/309 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  PDV T+N LID YC     D G  +L+ M E G+  D
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      L+ +LDL  +M+  G+ PD+ + N+L+  L   GK  +A  +F+
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI+++GL        A  +++ +   G VP  +TY
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +P+ +T+ T++    +  +   GLE+   M R
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D   Y T+I  F K+G +  A D  ++M++ GV  D ++  +++ +   + +L+ 
Sbjct: 604 RGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKR 663

Query: 306 AYLLLDEME 314
           A  +L++++
Sbjct: 664 AVAMLEDLQ 672



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 182/386 (47%), Gaps = 11/386 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC + R  +A+ ++ + +   + P+VVTY+ LI+AY +   F     + + M   GI P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYNS+I G  + + L  +  +   M   G  PDV+++N+L+       + D+   +  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L   T T+N +++G C     + AL + + +   G  P++VT N L+ GLC  G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 197 RLRTARWILKELGDS-----------GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           +L+ A  + K +  S           G  P+  TY  ++       K+    E+   M  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   +   Y ++I    K  RL EAT   + M +     D+V++NTL++ YCK G+++ 
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
              L  EM ++G   D  T+  LI G  K GNI GA    + M   G   +      ++ 
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLT 653

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTY 391
            L    ++  A+ + E +++    ++
Sbjct: 654 VLWSKEELKRAVAMLEDLQMSMDLSF 679



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 94/197 (47%), Gaps = 2/197 (1%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    MV       ++ +N L+ +  +  + +    L  +ME++   
Sbjct: 50  SGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIP 109

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           CD Y+  ILI   C    +  A      + K+GF  ++  ++ ++  L  + ++  A+++
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL 169

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           F  M   +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+   G  
Sbjct: 170 FHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229

Query: 440 REAKKIQSKIRMAKISH 456
             A  +  K  M ++SH
Sbjct: 230 VSALNLLRK--MEEMSH 244


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 20/452 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  V  FC+A  L+ AE ++      G   P++VT+N +++  C+    +    + + M 
Sbjct: 191 NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 250

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++PDVV+YN+L++G  +   L  SL +  EM + G+ PDV ++ SL+H   + G  +
Sbjct: 251 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 310

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +   M    L     TF  +++G CK  + D+AL     ++K G  P +V YN LI
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GR+  AR +++E+      P+ +TY+TI+    +        ++   M +KG  
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I    +  RL +A +  E M+  GVQ D  +Y TLI+ +CKEG +E A  L
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 490

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-----RLHLE--YMNKIGFD-------- 354
            DEM ++G   D  T+++LI+GL K+   K A     +L+ E    + I +D        
Sbjct: 491 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           +  ++   ++      G +  A  V++SM  +    D   YS ++H  C+   +  A   
Sbjct: 551 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSF 610

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               L+SG     ++  ++V GL   G   EA
Sbjct: 611 HKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 209/395 (52%), Gaps = 5/395 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L  A   +   +R GV P+V TYN+L+ A C     +    ++  MR AG +P+ VTYN+
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           L+A   R   L  +  ++  M E G   P++ ++NS+++ L + G+ + A +VF +M+  
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            L P   ++N +L+G CK      +L +F  + + G VP++VT+  LI   CKAG L  A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             ++ ++ + G   N +T+T ++    +       L  +  M++ G       Y  +I  
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALING 372

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           + K+GR+  A + + +M    V+ D+V+Y+T+I+ YCK G L++A+ L  +M K+G   D
Sbjct: 373 YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPD 432

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T++ LI GLC+   +  A    E M ++G   +   Y  ++D   K+G ++ A+++ +
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
            M  K    D  TYS +++ L K+ R   A +LL 
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLF 527



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 210/418 (50%), Gaps = 6/418 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P V  YN ++ A     S  +    L+ M   G++P+V TYN L+        L  +
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLN 155
           + ++ +M   G  P+  +YN+L+    + G+ D A RV   M   G+  P   TFN M+N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK    + A ++F  + + G  P++V+YN L+ G CK G L  +  +  E+   G  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+T+++    +    +  + +++ M+ +G   +   +  +I  F K G L +A   +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M   G+Q  +V YN LIN YCK G+++ A  L+ EME +  + D  T++ +I G CK 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
           GN+  A    + M K G   +   Y+ ++  L ++ +++ A  +FE+M       D FTY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++++   CK   +  A  L    ++ GV         +++GL  S   +EA ++  K+
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 198/393 (50%), Gaps = 6/393 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           ++ LI +Y            L     AG +P V  YN+++   +  SL S +   L  ML
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPS-ARRFLSSML 144

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ P+V++YN L+  L   G+ +EA  V  DM      P   T+N ++   C+    D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 165 NALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
            A R+   +++ G   P LVT+N ++ GLCKAGR+  AR +  E+   G AP+ ++Y T+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +       L + S M ++G   D   + ++I A  K G L++A   + QM   G+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +++ V++  LI+ +CK+G L+ A L ++EM K G +     +  LI+G CK G +  AR 
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            +  M       ++  Y+ I+    K G +D A  + + M  K    D+ TYSS++  LC
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + KRL  A +L  + L+ GV+  +     ++DG
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 477



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   L ++ A+  +  + G++PDVVT+  LI A C+  + +    ++ +MRE
Sbjct: 262 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 321

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + VT+ +LI G  +   L  +L  ++EM + GI P V  YN+L++   +LG+ D 
Sbjct: 322 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    + P   T++ +++G CK    D+A ++ + + K G +P+ +TY+ LI+
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+  RL  A  + + +   G  P+  TYTT++    +    +  L +   M RKG   
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 501

Query: 251 DGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDGVQLDIV----------SYNTLIN 295
           D   Y  +I    K  R KEA       Y E  V D ++ D +          S   L+ 
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 561

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            +C +G ++ A  +   M  + ++ D   ++ILI G C+ GN++ A    + M + GF  
Sbjct: 562 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESM 383
           N  +   +V  L ++G +  A N  + +
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 27/324 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R++ A  +I +     V PDVVTY+ +I  YC+  + D+ + +  +M +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
            G+ PD +TY+SLI G      L+ + +L + ML++G+ PD ++Y +L+  HC  + G  
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC--KEGNV 484

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +  +MI   + P   T+++++NGL K+  T  A R+   L     VP+ + Y+ L
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544

Query: 189 ---------------IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
                          +KG C  G ++ A  + + + D     +   Y+ ++    R    
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +  L     M R G++ +     +++    + G + EA + ++ ++T     D  +   L
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 294 INLYCKEGKLEAAYLLLDEMEKQG 317
           I+L  KEG        +D  + QG
Sbjct: 665 IDLNRKEG--------MDYFQAQG 680


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 216/442 (48%), Gaps = 3/442 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++R   + +  +C+ + + +A  ++ +  +  ++P  V+Y  +I+  C          
Sbjct: 112 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 171

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M  +G+ P+VV Y++LI G      +  +  LLD M   G+ PD++ YN+++ CL 
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK +EA+    ++    L P   TF   + G  K      A + F  +  HG +P   
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y +LI G  KAG L  A  I + L   G  P+  T +  +    +N + +  L++ S +
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K KG   D F Y ++I+ F K G +++A +  ++M   G+  +I  YN L++  CK G +
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L D M ++G E D  T++ +IDG CK+ N+  A      M   G   +   YN +
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 364 VDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           V    K+G ++ A+N+F  M  K    + ++++++   CK+ ++  AS+L    +   + 
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531

Query: 421 ILKSAQKAVVDGLRHSGCRREA 442
                   V+D    +G   EA
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEA 553



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 204/413 (49%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P+  TY ++    C+    +        M++ G+ PD    ++LI G  R   +   
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + D M+  GIP ++ +YN L+H L + GK ++A  + + MI     P + TF +++ G
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+      AL +   ++K   VP  V+Y  +I GLC    L  A  +L+++  SG  PN
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y+T++       + +    +L  M   G   D F Y  +I+   K G+++EA+ Y+ 
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++   G++ D V++   I  Y K GK+  A    DEM   G   +   +T+LI+G  KAG
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           N+  A     +++ +G   +++  +  +  L K+G++  A+ VF  ++    V D FTYS
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S++   CK   +  A +L       G+        A+VDGL  SG  + A+K+
Sbjct: 365 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 212/439 (48%), Gaps = 5/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  ++EKA  I+   I LG  P+  T+ +LI+ YC+  +      +L+ M +
Sbjct: 84  NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P  V+Y ++I G      LS +  LL++M   G+ P+V  Y++L+      G+ +E
Sbjct: 144 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 203

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+   M C  + P    +N +++ L K    + A      +Q  G  P+ VT+   I 
Sbjct: 204 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 263

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G++  A     E+ D G  PN   YT ++   F+       L I   +   G   
Sbjct: 264 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP 323

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D       I   +K GR++EA     ++   G+  D+ +Y++LI+ +CK+G++E A+ L 
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 383

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   + + +  L+DGLCK+G+I+ AR   + M + G + +   Y+ ++D   K 
Sbjct: 384 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 443

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +  A ++F  M  K     SF Y+++VH  CK   +  A  L    L+ G     S  
Sbjct: 444 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 503

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++DG   S   +EA ++
Sbjct: 504 -TLIDGYCKSCKIQEASQL 521



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 190/399 (47%), Gaps = 22/399 (5%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA  L +A +I      LGVLPDV T +  I    +         + + ++E G+ PDV 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+SLI+G  +   +  + +L DEM   GI P+++ YN+L+  L + G    A ++F  M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P + T++ M++G CK+     A  +F  +   G  P    YN L+ G CK G +
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  + +E+   G A   +++ T++    ++ K +   ++   M  K    D   Y TV
Sbjct: 482 EKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540

Query: 259 IAAFVKIGRLKEAT-----------------DYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           I    K G+++EA                     E+MV  GV+ D V+Y  +I  +CKE 
Sbjct: 541 IDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 600

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L  A+ L DE+  +G       H +LI  LCK  ++  A   L+ M ++G   +L A +
Sbjct: 601 NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACS 660

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
            +V    + GK+D A  VFE ++    V D+ T   +V+
Sbjct: 661 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 215/461 (46%), Gaps = 22/461 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    KA ++E+A   +++    G+ PD VT+   I  Y +           + M +
Sbjct: 224 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 283

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+   Y  LI G  +   L  +L +   +  +G+ PDV + ++ +H L + G+  E
Sbjct: 284 HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQE 343

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +VF ++    L P   T++ +++G CK    + A  +   +   G  P +  YN L+ 
Sbjct: 344 ALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD 403

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+G ++ AR +   + + G  P+++TY+T++    ++        +   M  KG   
Sbjct: 404 GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 463

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             F Y  ++    K G +++A +   +M+  G    + S+NTLI+ YCK  K++ A  L 
Sbjct: 464 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLF 522

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK--IGFDSNLEAYNCIVDRLG 368
            EM  +    D  T+T +ID  CKAG ++ A L  + M +  +  D+    +  +V +  
Sbjct: 523 QEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGV 582

Query: 369 KDGKIDHAI---------NVFESMEVKDSFTYSSM-----VHNL-----CKAKRLPSASK 409
           K  ++ + +         N+ E+ +++D      M     +H+L     CK + L  ASK
Sbjct: 583 KPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK 642

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           LL    + G++   +A   +V     +G   EA ++   ++
Sbjct: 643 LLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 683



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 205/480 (42%), Gaps = 55/480 (11%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    I     C+A R+ +A+    +  + G+ PD    + LID + +    D    I 
Sbjct: 9   NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   GI  +++TYN LI G  +   +  + ++L  M+ +G  P     NS   CL   
Sbjct: 69  DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP-----NSRTFCLLIE 123

Query: 126 GKPDEAN-----RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           G   E N      +  +M   +L P   ++  M+NGLC  +    A ++   +   G  P
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +V Y+ LI G    GR+  AR +L  +  SG AP+   Y  I+ C  +  K +     L
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY--- 297
             ++ +G   D   +   I  + K G++ EA  Y ++M+  G+  +   Y  LIN +   
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303

Query: 298 --------------------------------CKEGKLEAAYLLLDEMEKQGFECDKYTH 325
                                            K G+++ A  +  E++++G   D +T+
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363

Query: 326 TILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           + LI G CK G ++ A  LH E   K G   N+  YN +VD L K G I  A  +F+ M 
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            K    DS TYS+M+   CK++ +  A  L       GV+        V + L H  C+ 
Sbjct: 423 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ----PHSFVYNALVHGCCKE 478



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 159/335 (47%), Gaps = 18/335 (5%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCK   +EKA  +  +    G+ P++  YN L+D  C+         + + M E G+
Sbjct: 367 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 426

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD VTY+++I G  ++  ++ +  L  EM   G+ P  + YN+L+H   + G  ++A  
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 486

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F++M+       T +FN +++G CK+     A ++F+ +     +P+ VTY  +I   C
Sbjct: 487 LFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 545

Query: 194 KAGRLRTARWILKELGD-----------------SGHAPNAITYTTIMKCCFRNRKYKLG 236
           KAG++  A  + KE+ +                  G  P+ +TY  ++    +       
Sbjct: 546 KAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            ++   +  KG    G  +  +I A  K   L EA+  +++M   G++  + + +TL+  
Sbjct: 606 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 665

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
           + + GK++ A  + + ++  G   D  T   L++G
Sbjct: 666 FHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 17/223 (7%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF------- 55
           G  +T   N  +  +CK+ ++++A  +  + I   ++PD VTY  +ID +C+        
Sbjct: 495 GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 554

Query: 56  ----------VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
                     +  D  + +  +M   G+ PD VTY  +I    +   L  +  L DE++ 
Sbjct: 555 LLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 614

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G+      ++ L+  L +     EA+++  +M    L P  A  + ++    +    D 
Sbjct: 615 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 674

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           A R+F G++  G VP+  T   L+ G         AR ++K+L
Sbjct: 675 ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 216/442 (48%), Gaps = 3/442 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++R   + +  +C+ + + +A  ++ +  +  ++P  V+Y  +I+  C          
Sbjct: 311 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 370

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M  +G+ P+VV Y++LI G      +  +  LLD M   G+ PD++ YN+++ CL 
Sbjct: 371 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 430

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK +EA+    ++    L P   TF   + G  K      A + F  +  HG +P   
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y +LI G  KAG L  A  I + L   G  P+  T +  +    +N + +  L++ S +
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K KG   D F Y ++I+ F K G +++A +  ++M   G+  +I  YN L++  CK G +
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L D M ++G E D  T++ +IDG CK+ N+  A      M   G   +   YN +
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670

Query: 364 VDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           V    K+G ++ A+N+F  M  K    + ++++++   CK+ ++  AS+L    +   + 
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730

Query: 421 ILKSAQKAVVDGLRHSGCRREA 442
                   V+D    +G   EA
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEA 752



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 212/439 (48%), Gaps = 5/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  ++EKA  I+   I LG  P+  T+ +LI+ YC+  +      +L+ M +
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 342

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P  V+Y ++I G      LS +  LL++M   G+ P+V  Y++L+      G+ +E
Sbjct: 343 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 402

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+   M C  + P    +N +++ L K    + A      +Q  G  P+ VT+   I 
Sbjct: 403 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 462

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G++  A     E+ D G  PN   YT ++   F+       L I   +   G   
Sbjct: 463 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP 522

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D       I   +K GR++EA     ++   G+  D+ +Y++LI+ +CK+G++E A+ L 
Sbjct: 523 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 582

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   + + +  L+DGLCK+G+I+ AR   + M + G + +   Y+ ++D   K 
Sbjct: 583 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 642

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +  A ++F  M  K     SF Y+++VH  CK   +  A  L    L+ G     S  
Sbjct: 643 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 702

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++DG   S   +EA ++
Sbjct: 703 -TLIDGYCKSCKIQEASQL 720



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 207/414 (50%), Gaps = 6/414 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P+  TY ++    C+    +        M++ G+ PD    ++LI G  R   +   
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + D M+  GIP ++ +YN L+H L + GK ++A  + + MI     P + TF +++ G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+      AL +   ++K   VP  V+Y  +I GLC    L  A  +L+++  SG  PN
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y+T++       + +    +L  M   G   D F Y  +I+   K G+++EA+ Y+ 
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++   G++ D V++   I  Y K GK+  A    DEM   G   +   +T+LI+G  KAG
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 503

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           N+  A     +++ +G   +++  +  +  L K+G++  A+ VF  ++    V D FTYS
Sbjct: 504 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 563

Query: 393 SMVHNLCKAKRLPSASKLLLS-CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S++   CK   +  A +L    CLK G+        A+VDGL  SG  + A+K+
Sbjct: 564 SLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKL 616



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 196/382 (51%), Gaps = 5/382 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+++A  +  +    G++PDV TY+ LI  +C+    +  + + + M   GI+P++ 
Sbjct: 536 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 595

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN+L+ G  ++  +  +  L D M E G+ PD  +Y++++    +     EA  +F +M
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P +  +N +++G CK    + A+ +FR + + GF   L ++N LI G CK+ ++
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKI 714

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  + +E+      P+ +TYTT++    +  K +    +   M+ +    D   Y ++
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +  + K+G+  E     E+MV  GV+ D V+Y  +I  +CKE  L  A+ L DE+  +G 
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
                 H +LI  LCK  ++  A   L+ M ++G   +L A + +V    + GK+D A  
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 379 VFESME----VKDSFTYSSMVH 396
           VFE ++    V D+ T   +V+
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVN 916



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 212/438 (48%), Gaps = 5/438 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  ++ +A     + +  G++P+   Y +LI+ + +  +     +I   +   G+ PD
Sbjct: 464 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 523

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T ++ I G  +N  +  +L +  E+ E G+ PDV++Y+SL+    + G+ ++A  +  
Sbjct: 524 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 583

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P    +N +++GLCK+     A ++F G+ + G  P+ VTY+ +I G CK+ 
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +  E+   G  P++  Y  ++  C +    +  + +   M +KG+      + 
Sbjct: 644 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFN 702

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K  +++EA+   ++M+   +  D V+Y T+I+ +CK GK+E A LL  EM+++
Sbjct: 703 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 762

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  T+T L+ G  K G         E M   G   +   Y  ++    K+  +  A
Sbjct: 763 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 822

Query: 377 INVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             + + +  K   T  +    ++  LCK + L  ASKLL    + G++   +A   +V  
Sbjct: 823 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 882

Query: 433 LRHSGCRREAKKIQSKIR 450
              +G   EA ++   ++
Sbjct: 883 FHEAGKMDEATRVFEGVK 900



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 205/480 (42%), Gaps = 55/480 (11%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    I     C+A R+ +A+    +  + G+ PD    + LID + +    D    I 
Sbjct: 208 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 267

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   GI  +++TYN LI G  +   +  + ++L  M+ +G  P     NS   CL   
Sbjct: 268 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP-----NSRTFCLLIE 322

Query: 126 GKPDEAN-----RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           G   E N      +  +M   +L P   ++  M+NGLC  +    A ++   +   G  P
Sbjct: 323 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 382

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +V Y+ LI G    GR+  AR +L  +  SG AP+   Y  I+ C  +  K +     L
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY--- 297
             ++ +G   D   +   I  + K G++ EA  Y ++M+  G+  +   Y  LIN +   
Sbjct: 443 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 502

Query: 298 --------------------------------CKEGKLEAAYLLLDEMEKQGFECDKYTH 325
                                            K G+++ A  +  E++++G   D +T+
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 326 TILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           + LI G CK G ++ A  LH E   K G   N+  YN +VD L K G I  A  +F+ M 
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 621

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            K    DS TYS+M+   CK++ +  A  L       GV+        V + L H  C+ 
Sbjct: 622 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ----PHSFVYNALVHGCCKE 677



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 166/364 (45%), Gaps = 36/364 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCK   +EKA  +  +    G+ P++  YN L+D  C+         + + M E G+
Sbjct: 566 ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 625

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD VTY+++I G  ++  ++ +  L  EM   G+ P  + YN+L+H   + G  ++A  
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 685

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F++M+       T +FN +++G CK+     A ++F+ +     +P+ VTY  +I   C
Sbjct: 686 LFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 744

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG++  A  + KE+ +     + +TYT++M    +  +      +   M  KG   D  
Sbjct: 745 KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 804

Query: 254 GYCTVIAAFVK--------------IGR---------------------LKEATDYMEQM 278
            Y  VI A  K              +G+                     L EA+  +++M
Sbjct: 805 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 864

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G++  + + +TL+  + + GK++ A  + + ++  G   D  T   L++G     + 
Sbjct: 865 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 924

Query: 339 KGAR 342
           + AR
Sbjct: 925 EDAR 928



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 36/322 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V   CK+  +++A  +       G+ PD VTY+ +ID YC+  +    +++ + M
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ P    YN+L+ G  +   +  +++L  EML+ G    + S+N+L+    +  K 
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKI 714

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA+++FQ+MI   + P   T+  +++  CK    + A  +F+ +Q+   + + VTY  L
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC---------CFRNRKYKLG--- 236
           + G  K G+      + +++   G  P+ +TY  ++            F+ R   +G   
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 237 --------LEILSAMKRKGYT-----FDGFGY----------CTVIAAFVKIGRLKEATD 273
                   L I +  KR+  T      D  G            T++ +F + G++ EAT 
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 274 YMEQMVTDGVQLDIVSYNTLIN 295
             E + + G+  D  +   L+N
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVN 916



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 101/217 (46%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  +T   N  +  +CK+ ++++A  +  + I   ++PD VTY  +ID +C+    +   
Sbjct: 694 GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 753

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M+E  +  D VTY SL+ G  +    S    L ++M+  G+ PD  +Y  +++  
Sbjct: 754 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 813

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +     EA ++  +++   +       ++++  LCK      A ++   + + G  P L
Sbjct: 814 CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 873

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              + L++   +AG++  A  + + +   G  P+  T
Sbjct: 874 AACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA ++E+A  +  +     ++ D VTY  L+  Y +       + +  +M   G+ PD 
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY  +I    +   L  +  L DE++  G+      ++ L+  L +     EA+++  +
Sbjct: 804 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 863

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    L P  A  + ++    +    D A R+F G++  G VP+  T   L+ G      
Sbjct: 864 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTD 923

Query: 198 LRTARWILKEL 208
              AR ++K+L
Sbjct: 924 SEDARNLIKQL 934


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 219/481 (45%), Gaps = 41/481 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI V   CK  ++EK    + +    GV PD+VTYN LI AY      +  + +++ M 
Sbjct: 228 LNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMP 287

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G SP V TYN++I G  ++     + ++  EML  G+ PD  +Y SL+    + G   
Sbjct: 288 SKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAV 347

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   +F DM   D+ P    F+ M++   ++   D AL  F  +++ G +P+ V Y ILI
Sbjct: 348 ETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 407

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C+ G +  A  +  E+   G A + +TY TI+    + +      ++ + M  +G  
Sbjct: 408 QGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF 467

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL---------------- 293
            D +    +I    K+G L+ A +  ++M    ++LD+V+YNTL                
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527

Query: 294 -------------------INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                              +N  C +G L  A+ + DEM  +  +        +I G C+
Sbjct: 528 WADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCR 587

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDS 388
           +GN     + LE M   GF  +  +YN ++    K+  +  A  + + ME      V D 
Sbjct: 588 SGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDV 647

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           FTY+S++H  C+  ++  A  +L   ++ GV   +S   ++++G        EA +   +
Sbjct: 648 FTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDE 707

Query: 449 I 449
           +
Sbjct: 708 M 708



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 190/406 (46%), Gaps = 4/406 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + ++ + TF +A +L +A          G    +   N LI +  +    +  + I   +
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             +G+  +V T N ++    ++  +      L E+ E G+ PD+ +YN+L+      G  
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLM 276

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  +   M     +P   T+N ++NGLCK+   + A  +F  + + G  P+  TY  L
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 336

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +   CK G       I  ++      P+ + ++++M    R+      L   +++K  G 
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 396

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  + + G + EA +   +M+  G  +D+V+YNT+++  CK   L  A  
Sbjct: 397 IPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 456

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L +EM ++G   D YT TILIDG CK GN++ A    + M +     ++  YN ++D  G
Sbjct: 457 LFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFG 516

Query: 369 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 410
           K G ID A  ++  M  K+      ++S +V+ LC    L  A ++
Sbjct: 517 KVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRV 562



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 184/378 (48%), Gaps = 41/378 (10%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK     + E I  D     V+PD+V ++ ++  + +  + D      N ++EAG+ PD 
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y  LI G  R  ++S +++L +EML+ G   DV +YN+++H L +     EA+++F +
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    L P + T  I+++G CK     NA+ +F+ +++     ++VTYN L+ G  K G 
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 198 LRTARWILKELGDSGHAPNAITYT-----------------------------TIMKC-- 226
           + TA+ I  ++      P  I+++                             T+M C  
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 227 -----CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                C R+     G   L  M  +G+  D   Y T+I  FVK   + +A   +++M   
Sbjct: 581 MIKGYC-RSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEK 639

Query: 282 --GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+  D+ +YN++++ +C+E +++ A  +L +M ++G   D+ T+T LI+G     N+ 
Sbjct: 640 QGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLT 699

Query: 340 GA-RLHLEYMNKIGFDSN 356
            A R H E + + GF  +
Sbjct: 700 EAFRFHDEMLQR-GFSPD 716



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 153/315 (48%), Gaps = 2/315 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  I +  +C+   + +A  +  + ++ G   DVVTYN ++   C+         + N M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+ PD  T   LI G  +   L  +++L  +M E  I  DV +YN+L+    ++G  
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  ++ DM+  ++ P   +F+I++N LC   +   A R++  +      P ++  N +
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-- 246
           IKG C++G        L+++   G  P+ I+Y T++    +         ++  M+ K  
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D F Y +++  F +  ++KEA   + +M+  GV  D  +Y +LIN +  +  L  A
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701

Query: 307 YLLLDEMEKQGFECD 321
           +   DEM ++GF  D
Sbjct: 702 FRFHDEMLQRGFSPD 716



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 197/444 (44%), Gaps = 22/444 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  +    ++ RL  A++ ++  IR   +  V   N L+  Y    S D+ + +L R  
Sbjct: 106 LSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIR-- 163

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                        + A   R +  + +L     +   G    + + N+L+  L ++G  +
Sbjct: 164 -----------TFVQARKLREAYEAFTL-----LRSKGYTVSIDACNALIGSLVRIGWVE 207

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A R++Q++    +     T NIM+N LCK+   +        +Q+ G  P++VTYN LI
Sbjct: 208 LAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLI 267

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
                 G +  A  ++  +   G +P   TY T++    ++ KY+   E+ + M R G +
Sbjct: 268 SAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 327

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y +++    K G   E  +    M +  V  D+V ++++++L+ + G L+ A + 
Sbjct: 328 PDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 387

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + +++ G   D   +TILI G C+ G I  A      M + G   ++  YN I+  L K
Sbjct: 388 FNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCK 447

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
              +  A  +F  M  +    DS+T + ++   CK   L +A +L     +  +++    
Sbjct: 448 RKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVT 507

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++DG    G    AK+I + +
Sbjct: 508 YNTLLDGFGKVGDIDTAKEIWADM 531



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 2/215 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     N  +  F K   ++ A+ I  D +   +LP  +++++L++A C        + 
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M    I P V+  NS+I G  R+   S     L++M+  G  PD  SYN+L++   
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621

Query: 124 QLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           +     +A  + + M    G L P   T+N +L+G C+      A  + R + + G  P+
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPD 681

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             TY  LI G      L  A     E+   G +P+
Sbjct: 682 RSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 94/197 (47%), Gaps = 4/197 (2%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  FV+  +L+EA +    + + G  + I + N LI    + G +E A+ +  E+ + G
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              + YT  I+++ LCK G ++     L  + + G   ++  YN ++      G ++ A 
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280

Query: 378 NVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +  +M  K      +TY+++++ LCK  +   A ++    L+SG+    +  ++++   
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340

Query: 434 RHSGCRREAKKIQSKIR 450
              G   E + I S +R
Sbjct: 341 CKKGDAVETENIFSDMR 357


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 8/408 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  +   A +++   ++LG  PD  T+N LI              +++RM 
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PDVVTYNS++ G  R+   S +LDLL +M E  +  DV++Y++++  L + G  D
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  +F++M    +     T+N ++ GLCK  ++ D AL + + +     VP ++T+N+L
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVL 294

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKG 247
           +    K G+L+ A  + KE+   G +PN ITY T+M   C +NR  +    +L  M R  
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NMLDLMVRNK 353

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + D   + ++I  +  + R+ +       +   G+  + V+Y+ L+  +C+ GK++ A 
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D  T+ IL+DGLC  G ++ A    E + K   D  +  Y  I++ +
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            K GK++ A N+F S+  K    +  TY+ M+  LCK   L  A+ LL
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 209/410 (50%), Gaps = 4/410 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  ++ T N++I+ +C+       Y++L ++ + G  PD  T+N+LI G      +S +
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+E G  PDV +YNS+++ + + G    A  + + M   ++     T++ +++ 
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC++   D A+ +F+ ++  G    +VTYN L++GLCKAG+      +LK++      PN
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++    +  K +   E+   M  +G + +   Y T++  +    RL EA + ++
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV +    DIV++ +LI  YC   +++    +   + K+G   +  T++IL+ G C++G
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
            IK A    + M   G   ++  Y  ++D L  +GK++ A+ +FE ++          Y+
Sbjct: 408 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 467

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           +++  +CK  ++  A  L  S    GV+        ++ GL   G   EA
Sbjct: 468 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 208/416 (50%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           ++ +A  ++   +  G  PDVVTYN +++  C+         +L +M E  +  DV TY+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           ++I    R+  +  ++ L  EM   GI   V +YNSL+  L + GK ++   + +DM+  
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           ++ P   TFN++L+   K      A  +++ +   G  P ++TYN L+ G C   RL  A
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L  +  +  +P+ +T+T+++K     ++   G+++   + ++G   +   Y  ++  
Sbjct: 343 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 402

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F + G++K A +  ++MV+ GV  D+++Y  L++  C  GKLE A  + ++++K   +  
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
              +T +I+G+CK G ++ A      +   G   N+  Y  ++  L K G +  A  +  
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ME      +  TY++++    +   L +++KL+      G     S+ K V+D L
Sbjct: 523 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 181/354 (51%), Gaps = 11/354 (3%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F ++ T+ +   V T+       CKA +      ++ D +   ++P+V+T+N+L+D + 
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         +   M   GISP+++TYN+L+ G    + LS + ++LD M+     PD+ 
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           ++ SL+     + + D+  +VF+++    L     T++I++ G C++     A  +F+ +
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
             HG +P+++TY IL+ GLC  G+L  A  I ++L  S      + YTTI++   +  K 
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 479

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +    +  ++  KG   +   Y  +I+   K G L EA   + +M  DG   +  +YNTL
Sbjct: 480 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 539

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           I  + ++G L A+  L++EM+  GF  D  +  ++ID L  A      RL L Y
Sbjct: 540 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK----RLTLRY 589



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +FQ+MI     P    F+   + + + +  +  L   + L+ +G    + T N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +   A  +L ++   G+ P+  T+ T++K  F   K    + ++  M   
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y +++    + G    A D + +M    V+ D+ +Y+T+I+  C++G ++AA
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EME +G +    T+  L+ GLCKAG      L L+ M       N+  +N ++D 
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K+GK+  A  +++ M  +    +  TY++++   C   RL  A+ +L
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 95/197 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V  FC++ +++ AE +  + +  GVLPDV+TY +L+D  C     +    I   +++
Sbjct: 397 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + +   +V Y ++I G  +   +  + +L   +   G+ P+V +Y  ++  L + G   E
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN + + M      P   T+N ++    ++     + ++   ++  GF  +  +  ++I 
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576

Query: 191 GLCKAGRLRTARWILKE 207
            L  A +  T R+ L +
Sbjct: 577 MLLSAMKRLTLRYCLSK 593


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 206/415 (49%), Gaps = 9/415 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  +  + +  F +   +E+A  +     ++ VLP +   NM++D   +   FD  + 
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGLVKKGRFDTMWK 179

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   G SP+VVTY +LI G  R      +  L DEM+E  I P V  Y  L+  L 
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              +  EA  +F+ M    + P   T+N M++G CK  +   AL +++ +   G +P +V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+ ILI GLCK   + +AR  L ++   G  PN   Y  ++    +       L + S +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D F Y  +I     + R++EA   +++M   G   + V+YNTLI+ YCKEG +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNC 362
           E A  +  +M ++G E +  T + LIDG CKAG ++ A  L+ E + K G   ++ AY  
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTA 478

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           ++D   KDG    A  + + M+      + FT S ++  LCK  R+  A KL L+
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 211/463 (45%), Gaps = 89/463 (19%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    K  R +    +  D +  G  P+VVTY  LID  C+   F   + + + M E
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I P VV Y  LI G    S +S +  +   M   G+ P++++YN++M    ++    +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCK---------------------NRYTDN---- 165
           A  ++Q+M+   L P   TF I+++GLCK                     N +  N    
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 166 ----------ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                     AL +   ++KH  +P++ TY+ILIKGLC   R+  A  +L+E+   G  P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           NA+TY T++                             GYC       K G +++A +  
Sbjct: 402 NAVTYNTLID----------------------------GYC-------KEGNMEKAIEVC 426

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            QM   G++ +I++++TLI+ YCK GK+EAA  L  EM  +G   D   +T LIDG  K 
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 336 GNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-------------- 380
           GN K A RLH E M + G   N+   +C++D L KDG+I  AI +F              
Sbjct: 487 GNTKEAFRLHKE-MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 381 ---ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
               S+   +   Y++++  LC   R+  ASK       SG+R
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 191/395 (48%), Gaps = 9/395 (2%)

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           + +L+R+  +  +P+V  +  LI   +   L+  +L +     +M + P + + N ++  
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L + G+ D   +V+ DM+    +P   T+  +++G C+      A R+F  + +    P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +V Y ILI+GLC   R+  A  + + + +SG  PN  TY T+M    +    K  LE+  
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   +   +  +I    K   +  A  ++  M + GV  +I  YN LI+ YCK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L  A  L  E+EK     D +T++ILI GLC    ++ A   L+ M K GF  N   YN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D   K+G ++ AI V   M  K    +  T+S+++   CKA ++ +A  L    +  
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           G+     A  A++DG    G  +EA ++  +++ A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 151/318 (47%), Gaps = 15/318 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  L +A ++  +  +  +LPDV TY++LI   C     +    +L  M++ G  P+
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G  +   +  ++++  +M E GI P++ ++++L+    + GK + A  ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P    +  +++G  K+  T  A R+ + +Q+ G  P + T + LI GLCK G
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 197 RLRTARWIL-------------KELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSA 242
           R+  A  +               EL  S  +PN + YT +++  C   R +K   +  S 
Sbjct: 523 RISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKAS-KFFSD 581

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+  G   D F    +I    +   L++       ++  G+  +   Y  L   Y + G 
Sbjct: 582 MRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGY 641

Query: 303 LEAAYLLLDEMEKQGFEC 320
           L++A    +++   G  C
Sbjct: 642 LKSALRCSEDLSGIGIGC 659


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 210/418 (50%), Gaps = 6/418 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P ++ YN ++ A     S  +   +L  M   G++P+V TYN L+           +
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 97  LDLL-DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           L ++ D+M   G  P+V +YN+L+    + G+ D A R+   M  G + P   TFN ++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK    ++A +MF  + + G  P+ V+YN L+ G CKAG L  A  +  E+   G  P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+T+++    R    +  + ++  M+ +G   + F +  +I  F + G L +A   M
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M    +Q  +V YN LIN YCK G+++ A  L+ EME +G + D  T++ ++ G CK 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
           G+   A      M K G   +   Y+ ++  L ++ ++  A  +FE M       D FTY
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++++   CK   +  A  L    +K GV         ++DGL  S   +EA+++  K+
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 211/395 (53%), Gaps = 5/395 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGISPDVVTYN 81
           L  A  ++   +R GV P+V TYN+L+ A C     +    ++ + MR AG +P+VVTYN
Sbjct: 135 LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYN 194

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           +L+A   R   +  +  L+  M E G+ P + ++N++++ L + G+ ++A ++F +M   
Sbjct: 195 TLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE 254

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            LTP   ++N +++G CK      AL +F  + + G VP++VT+  LI  +C+AG L  A
Sbjct: 255 GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             ++ ++ + G   N  T+T ++    RN      L  +  M+          Y  +I  
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           + K+GR+ EA + + +M   G++ D+V+Y+T+++ YCK G  ++A+ L  +M K+G   D
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T++ LI GLC+   +  A    E M ++G   +   Y  ++D   K+G +  A+++ +
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
            M  K    D  TYS ++  L K+ R   A +LL 
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF 529



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 15/388 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +CKA  L +A A+  +  + GV+PDVVT+  LI A C+  + +    ++ +MRE
Sbjct: 264 NTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRE 323

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  +  T+ +LI G  RN  L  +L  + EM E  I P V  YN L++   +LG+ DE
Sbjct: 324 RGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDE 383

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M    + P   T++ +L+G CK   TD+A  + R + K G VP+ +TY+ LI+
Sbjct: 384 ARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR 443

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+  RL  A  + +++   G  P+  TYTT++    +    +  L +   M +KG   
Sbjct: 444 GLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP 503

Query: 251 DGFGYCTVIAAFVKIGRLKEATD-----YMEQMVTDGVQLDIV----------SYNTLIN 295
           D   Y  +I    K  R KEA       Y E  V D ++ + +          S   L+ 
Sbjct: 504 DVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLK 563

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            +  +G +  A  +   M  + ++ D   +++LI G C+ GNI  A    + + + GF  
Sbjct: 564 GFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSP 623

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESM 383
           N  +   +V  L ++G    A NV + +
Sbjct: 624 NSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 203/444 (45%), Gaps = 24/444 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   CKA R+E A  +  +  R G+ PD V+YN L+  YC+         +   M 
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PDVVT+ SLI    R   L  ++ L+ +M E G+  + +++ +L+    + G  D
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD 347

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A    ++M    + P    +N+++NG CK    D A  +   ++  G  P++VTY+ ++
Sbjct: 348 DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK G   +A  + +++   G  P+AITY+++++     R+     E+   M + G  
Sbjct: 408 SGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQ 467

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T+I    K G +++A    ++M+  GV  D+V+Y+ LI+   K  + + A  L
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L ++  +    D   +  L+   C+    K     L+     GF                
Sbjct: 528 LFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVVALLK-----GFSMK------------- 568

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G ++ A  V++SM  +    D   YS ++H  C+   +  A       L+ G     ++
Sbjct: 569 -GLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTS 627

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
             ++V GL   G   EA  +  ++
Sbjct: 628 TISLVRGLFEEGMTVEADNVIQEL 651



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 159/330 (48%), Gaps = 17/330 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+   L+ A   + +     + P VV YN+LI+ YC+    D    +++ M   G+ PD
Sbjct: 340 FCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+++++G  +      + +L  +ML+ G+ PD  +Y+SL+  L +  +  +A  +F+
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L P   T+  +++G CK      AL +   + K G +P++VTY++LI GL K+ 
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--------- 247
           R + A+ +L +L      P+ I Y  +M CC R  ++K  + +L     KG         
Sbjct: 520 RTKEAQRLLFKLYYEDPVPDNIKYEALMHCC-RTAEFKSVVALLKGFSMKGLMNQADKVY 578

Query: 248 -------YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                  +  DG  Y  +I    + G + +A  + +Q++  G   +  S  +L+    +E
Sbjct: 579 QSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEE 638

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           G    A  ++ E+       D  T   LID
Sbjct: 639 GMTVEADNVIQELLNCCSLADAETSKALID 668



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 124/249 (49%), Gaps = 6/249 (2%)

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G+AP+ + Y  ++     +        +L++M R G   + + Y  ++ A    G+ +EA
Sbjct: 115 GYAPSLLAYNAVL-LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 272 TDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
              + + M   G   ++V+YNTL+  +C+ G+++AA  L+  M + G      T   +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
           GLCKAG ++ AR   + M + G   +  +YN +V    K G +  A+ VF  M     V 
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  T++S++H +C+A  L  A  L+    + G+R+ +    A++DG   +G   +A    
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 447 SKIRMAKIS 455
            ++R  +I 
Sbjct: 354 KEMRECRIQ 362


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 206/414 (49%), Gaps = 6/414 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + ++CK  ++++   ++ +  R G  P+ VTYN+LI+   +   F+    ++  M +
Sbjct: 238 NTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 297

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     TYN LI G     +L+ +L L +EM+  G  P V +YNS ++ L +LG+  +
Sbjct: 298 TGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +   DM+  +L P   ++N ++ G C+      A  +F  L+     P +VTYN L+ 
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L  A+ +  E+ + G AP+ +TYT ++    +     +  E    M  +G   
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y T I   +K+G    A    E+M+  G   D++ YN +++  CK G LE A  LL
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +M   G   D  T+T +I    + G + KG  +  E ++K G   ++  Y  ++     
Sbjct: 538 QKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK-GLTPSVVTYTVLIHGHAG 596

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            G+++ A   F  M+ K    +  TY+S+++ LCK +R+  A       ++ G+
Sbjct: 597 KGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 184/364 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+  A   + D +   +LPDVV+YN LI  YC+  +    + + + +R 
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P +VTYN+L+ G  R   L  +  L  EM+  GI PD+ +Y  L++   ++G    
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M+   L   +  +   + G  K   T  A  +   +   GF P+L+ YN+++ 
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G L  A  +L+++   G  P+ +TYT+I+     N + + G EI   M  KG T 
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I      GRL+ A  Y  +M   G+  ++++YN+LIN  CK  +++ AY   
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +KY++TILI+  C  GN + A    + M   G   +   ++ ++ +LGKD
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702

Query: 371 GKID 374
            K+ 
Sbjct: 703 CKLQ 706



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 140/297 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   LE A+ + ++ I  G+ PD+VTY +L++  C+  S        + M  
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH 472

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  D   Y + I G  +    S +  L +EML  G PPD+  YN ++  L +LG  +E
Sbjct: 473 EGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 532

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + Q M+   + P   T+  +++   +N        +F  +   G  P +VTY +LI 
Sbjct: 533 ASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIH 592

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    GRL  A     E+ + G  PN ITY +++    + R+        + M  KG   
Sbjct: 593 GHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFP 652

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           + + Y  +I     +G  +EA    +QM+  GVQ D  +++ L+    K+ KL+A +
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 6/372 (1%)

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI   ++ S++   L + D+M++  + PDV + N ++  L       +A  V++ M    
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P   T+N +L+  CK       L +   +Q+ G  P  VTYN+LI GL K G    A+
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            ++ E+  +G   +A TY  ++   F        L +   M  KG +     Y + I   
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K+GR+ +A   +  M+ + +  D+VSYNTLI  YC+ G L  A+LL DE+         
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409

Query: 323 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            T+  L+DGLC+ G ++ A +L +E +N+ G   ++  Y  +V+   K G +  A   F+
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M  +    DS+ Y++ +    K      A  L    L  G          VVDGL   G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 438 CRREAKKIQSKI 449
              EA ++  K+
Sbjct: 529 NLEEASELLQKM 540



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 97/191 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ V   CK   LE+A  ++   +  GV+PD VTY  +I A+ +      G  I   M
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++P VVTY  LI G      L  +     EM E GI P+V +YNSL++ L ++ + 
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM 635

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   F +M+   + P   ++ I++N  C       AL +++ +   G  P+  T++ L
Sbjct: 636 DQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695

Query: 189 IKGLCKAGRLR 199
           +K L K  +L+
Sbjct: 696 LKQLGKDCKLQ 706


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 227/479 (47%), Gaps = 39/479 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   CK  ++E  ++ + D    GV PDVVTYN LI+AYC+    +  + +++ M 
Sbjct: 361 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420

Query: 70  EAGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLD--- 98
             G+ P V TYN++I G                          AT N LL   C  D   
Sbjct: 421 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 480

Query: 99  ----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
               + DEM   G+ PD+ S+++L+  L + G  D+A + F+DM    L P    + I++
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            G C+N     AL++   + + G   ++VTYN ++ GLCK   L  A  +  E+ + G  
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  T+TT++    ++      + +   M ++    D   Y T+I  F K   +++  + 
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M++  +  + +SY  LIN YC  G +  A+ L DEM ++GFE    T   ++ G C+
Sbjct: 661 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AGN   A   L  M   G   +   YN +++   K+  +D A  +   ME    + D  T
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+ +++   +  R+  A  ++L  ++ GV   +S   ++++G       +EA ++  ++
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEM 839



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 183/377 (48%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   NI +   C+ + +  AE I  +    GV+PD+V+++ LI    +    D       
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+ AG++PD V Y  LI G  RN ++S +L + DEMLE G   DV +YN++++ L +  
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA+ +F +M    + P   TF  ++NG  K+   + A+ +F  + +    P++VTYN
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK   +     +  ++      PN I+Y  ++              +   M  K
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEK 702

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+        T++  + + G   +A +++  M+  G+  D ++YNTLIN + KE  ++ A
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + L+++ME  G   D  T+ ++++G  + G ++ A L +  M + G + +   Y  +++ 
Sbjct: 763 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822

Query: 367 LGKDGKIDHAINVFESM 383
                 +  A  V + M
Sbjct: 823 HVTQNNLKEAFRVHDEM 839



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 171/332 (51%), Gaps = 2/332 (0%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L++A     D    G+ PD V Y +LI  +C+         + + M E G   DVVTYN+
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT 573

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++ G  +  +LS + +L  EM E G+ PD +++ +L++   + G  ++A  +F+ MI  +
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L P   T+N +++G CK    +    ++  +      P  ++Y ILI G C  G +  A 
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  E+ + G     IT  TI+K   R        E LS M  KG   DG  Y T+I  F
Sbjct: 694 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 753

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
           +K   +  A   + +M   G+  D+++YN ++N + ++G+++ A L++ +M ++G   D+
Sbjct: 754 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 813

Query: 323 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
            T+T LI+G     N+K A R+H E + + GF
Sbjct: 814 STYTSLINGHVTQNNLKEAFRVHDEMLQR-GF 844



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 205/451 (45%), Gaps = 6/451 (1%)

Query: 9   LLNICVCTFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + ++ V T+ +A +L E  EA  +   + G+   +   N L+    +    D  + I   
Sbjct: 290 VFDLLVRTYVQARKLREGCEAFRVLKSK-GLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +  +G+  +V T N +I    +N  +  +   L +M E G+ PDV +YN+L++   + G 
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  +   M    L PC  T+N ++NGLCK      A  +   + K G  P+  TYNI
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+   C+   +  A  I  E+   G  P+ ++++ ++    +N      L+    MK  G
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  F + G + EA    ++M+  G  LD+V+YNT++N  CKE  L  A 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM ++G   D YT T LI+G  K GN+  A    E M +     ++  YN ++D  
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K  +++    ++  M  +    +  +Y  +++  C    +  A +L    ++ G     
Sbjct: 649 CKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATI 708

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                +V G   +G   +A +  S + +  I
Sbjct: 709 ITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 739



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 195/434 (44%), Gaps = 6/434 (1%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            +R+E  E++++     G  P  + +++L+  Y Q      G      ++  G+   +  
Sbjct: 268 VSRVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 325

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
            NSL+ G  +   +  + ++  E++  G+  +V++ N +++ L +  K +       DM 
Sbjct: 326 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 385

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P   T+N ++N  C+    + A  +   +   G  P + TYN +I GLCK G+  
Sbjct: 386 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 445

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A+ +L E+   G +P+  TY  ++  C RN        I   M  +G   D   +  +I
Sbjct: 446 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 505

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               K G L +A  Y   M   G+  D V Y  LI  +C+ G +  A  + DEM +QG  
Sbjct: 506 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCX 565

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+  +++GLCK   +  A      M + G   +   +  +++   KDG ++ A+ +
Sbjct: 566 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTL 625

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           FE M  +    D  TY++++   CK   +   ++L    +   +     +   +++G  +
Sbjct: 626 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 685

Query: 436 SGCRREAKKIQSKI 449
            GC  EA ++  ++
Sbjct: 686 MGCVSEAFRLWDEM 699



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 156/310 (50%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+   + +A  +  + +  G   DVVTYN +++  C+         +   M E 
Sbjct: 538 ILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER 597

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ PD  T+ +LI G  ++  ++ ++ L + M++  + PDV +YN+L+    +  + ++ 
Sbjct: 598 GVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 657

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N ++ DMI   + P   ++ I++NG C       A R++  + + GF   ++T N ++KG
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 717

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C+AG    A   L  +   G  P+ ITY T++    +         +++ M+  G   D
Sbjct: 718 YCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F + GR++EA   M +M+  GV  D  +Y +LIN +  +  L+ A+ + D
Sbjct: 778 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 837

Query: 312 EMEKQGFECD 321
           EM ++GF  D
Sbjct: 838 EMLQRGFVPD 847


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 212/440 (48%), Gaps = 39/440 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +    K  ++ +AE I+    +  + PDV TY  LI  +C+  + D  + + +RM 
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN------------- 116
           + G  P+ VTY++LI G      +  +LD+L+EM+E GI P V++Y              
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320

Query: 117 ----------------------SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
                                 +L+  L +LGK + A  ++  M+   L P T T+N ++
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALI 380

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N LC       AL++F  ++ HG +    TYN +IKGLC  G +  A  + +++   G  
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P  +TY T++              +L  MK  G   D + Y  +++ F K G+L+ A+ Y
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++MV  G+  + VSY  LI+ + K+GK++ A  LL  ME+ G   +  ++  +I+GL K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
                 A    + M + G   N+  Y  ++D L ++G+   A  +F  ME    + + +T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 391 YSSMVHNLCKAKRLPSASKL 410
           YSS+++ LC+  +   A ++
Sbjct: 621 YSSLIYGLCQEGKADEAERM 640



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 219/439 (49%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K   +E A  +    +  G+ P ++T+N LI+   +         IL+++ +
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPDV TY SLI G  RN  L  +  + D M++ G  P+  +Y++L++ L   G+ DE
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++MI   + P   T+ + +  LC   + + A+ +   ++K G  P + TY  LI 
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G+L  A  +  ++   G  PN +TY  ++       ++   L+I   M+  G   
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I      G +++A    E+M+  G    +V+YNTLIN Y  +G +  A  LL
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M++ G E D++T+  L+ G  K G ++ A  + + M + G + N  +Y  ++D   KD
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+D A+++ + ME      +  +Y+++++ L K  R   A K+    ++ G+       
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++DGL  +G  + A KI
Sbjct: 587 TTLIDGLCRNGRTQFAFKI 605



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 226/495 (45%), Gaps = 78/495 (15%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+++A  ++ + I  G+ P V TY + I A C     +    ++ RM++ G  P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY +LI+G +R   L  ++ L  +ML+ G+ P+  +YN+L++ L   G+   A ++F 
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 137 DM--------------------ICGDLT---------------PCTATFNIMLNGLCKNR 161
            M                    + GD+                P   T+N ++NG     
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             +NA R+   ++++G  P+  TYN L+ G  K G+L +A +  +E+ + G  PN ++YT
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    ++ K  + L +L  M+  G   +   Y  VI    K  R  EA    ++MV  
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  ++++Y TLI+  C+ G+ + A+ +  +MEK+    + YT++ LI GLC+ G    A
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK----------------------------- 372
               E M++IG +  L+ Y+ +V  L + G+                             
Sbjct: 638 ----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 693

Query: 373 ------IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
                 +DHA+ +F S+E K        Y +++  LCKA ++  A  L  + L+      
Sbjct: 694 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 753

Query: 423 KSAQKAVVDGLRHSG 437
           +     +VDGL   G
Sbjct: 754 EIVWTVLVDGLLKEG 768



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 203/413 (49%), Gaps = 8/413 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V TY  LI    +    +    + ++M + G+ P+ VTYN+LI         S +
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +   M   G   +  +YN ++  L   G  ++A  +F+ M+     P   T+N ++NG
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
                  +NA R+   ++++G  P+  TYN L+ G  K G+L +A +  +E+ + G  PN
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++YT ++    ++ K  + L +L  M+  G   +   Y  VI    K  R  EA    +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G+  ++++Y TLI+  C+ G+ + A+ +  +MEK+    + YT++ LI GLC+ G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A    E M++IG +  L+ Y+ +V  L + G+   A  + + M+ +    D   Y 
Sbjct: 633 KADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 688

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S++   CK   +  A K+  S    G ++  S  +A++  L  +G   EA+ +
Sbjct: 689 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 741



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 178/353 (50%), Gaps = 5/353 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD  TYN L+  + ++   ++       M E G++P+ V+Y +LI G +++  +  +
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L LL  M EMG  P+V SYN++++ L +  +  EA ++   M+   L P   T+  +++G
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+N  T  A ++F  ++K   +P L TY+ LI GLC+ G+   A    + + + G  P 
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPT 648

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY+T++    R  ++    +++  MK +G+  D   Y +++ A  K   +  A     
Sbjct: 649 LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFH 708

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   G QL +  Y  LI   CK G++E A  L D M ++ +  D+   T+L+DGL K G
Sbjct: 709 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 768

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-KDS 388
            +      L  M    F  N++ Y  +   L + GK   +  + + ++V KDS
Sbjct: 769 ELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDS 821



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 187/378 (49%), Gaps = 4/378 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            LN +   G    + + N+L+    +  ++  + +L  +ML  GI P + ++N+L++ L 
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK  EA  +   +   DL+P   T+  ++ G C+NR  D A  +F  + K G  P  V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI GLC  GR+  A  +L+E+ + G  P   TYT  +         +  +E+++ M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K++G   +   Y  +I+   ++G+L+ A     +M+ +G+  + V+YN LIN  C  G+ 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  +   ME  G   +  T+  +I GLC  G+I+ A +  E M K+G    +  YN +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++     G +++A  + + M+      D +TY+ +V    K  +L SAS      ++ G+
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 420 RILKSAQKAVVDGLRHSG 437
                +  A++DG    G
Sbjct: 510 NPNPVSYTALIDGHSKDG 527



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 167/326 (51%), Gaps = 4/326 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  F K  +LE A     + +  G+ P+ V+Y  LID + +    D   ++L RM E
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+V +YN++I G ++ +  S +  + D+M+E G+ P+V +Y +L+  L + G+   
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F DM      P   T++ ++ GLC+    D A RM     + G  P L TY+ L+ 
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM----SEIGCEPTLDTYSTLVS 657

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ GR   A  ++K++ + G  P+   Y +++    +N +    L+I  +++ KG+  
Sbjct: 658 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 717

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I A  K G+++EA    + M+      D + +  L++   KEG+L+    LL
Sbjct: 718 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 777

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAG 336
             ME + F  +  T+ IL   L + G
Sbjct: 778 HIMESKNFTPNIQTYVILGRELSRIG 803



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D   AP       ++K C    + +   + L+ +   G+ F  +   T++    K   ++
Sbjct: 121 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM+  G+Q  ++++NTLIN+  K+GK+  A L+L ++ +     D +T+T LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
            G C+  N+  A    + M K G D N   Y+ +++ L  +G++D A+++ E M  K   
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              +TY+  +  LC  +    A +L+    K G R       A++ GL   G
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 97/253 (38%), Gaps = 66/253 (26%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN---- 66
           N  +    K NR  +AE I    +  G+LP+V+TY  LID  C+       + I +    
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611

Query: 67  ---------------------------RMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
                                      RM E G  P + TY++L++G  R      +  L
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671

Query: 100 LDEMLEMGIPPDVWSYNSLM--HCL------------------FQL-------------- 125
           + +M E G  PD   Y SL+  HC                   FQL              
Sbjct: 672 VKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 731

Query: 126 -GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ +EA  +F +M+  +       + ++++GL K    D  +++   ++   F P + T
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791

Query: 185 YNILIKGLCKAGR 197
           Y IL + L + G+
Sbjct: 792 YVILGRELSRIGK 804


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 223/443 (50%), Gaps = 4/443 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            +I +    KA  L +A ++  +    G   D+ TY  ++D   +         ++ ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G +P + TYN+L+ G  +   L  ++DLL ++++ G  PDV +Y SL+  L +  +  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F++M    L   T  +  ++ GL +      A  +++ +   G VP++VT + +I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCKAGR+  A  I K +   G APN + Y+ ++    + RK    LE+L+ MK+   T
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I    K G +  A  + ++M+  G + D+ +YN LI+ +CK G  +AA  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D+M       +  T+  LI GLCK   +  A L+ ++M + G   +   Y+ +VD L K
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361

Query: 370 DGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            GK++    +F+ ME   V +S T + ++ +LCKA R+  A  L  +  K G+     A 
Sbjct: 362 SGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAY 420

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            +++  L  SG   E + +  ++
Sbjct: 421 NSIISALIKSGKVNEGQAVYQEM 443



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 172/363 (47%), Gaps = 4/363 (1%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T++ LI G  +  +L  +  L  E    G   D+ +Y +++  L +  K  EA  + + +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                TP  AT+N +LNGLCK    + A+ + R +  +G  P++VTY  LI GL K  R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  + KE+   G A + + YT +++   +  K      +   M  +G   D     T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K GR+  A    + M   G+  + V Y+ LI+  CK  K++ A  +L +M+K   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  T+ ILIDGLCK+G++  AR   + M + G   ++  YN ++    K G  D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF+ M       +  TY +++  LCK ++L  AS       + G         ++VDGL 
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 435 HSG 437
            SG
Sbjct: 361 KSG 363


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 206/416 (49%), Gaps = 9/416 (2%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            K +  +  + +  F +   +E+A  +     ++ VLP +   NM++D   +   FD  +
Sbjct: 122 SKFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGLVKKGRFDTMW 178

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M   G SP+VVTY +LI G  R      +  L DEM+E  I P V  Y  L+  L
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGL 238

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
               +  EA  +F+ M    + P   T+N M++G CK  +   AL +++ +   G +P +
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT+ ILI GLCK   + +AR  L ++   G  PN   Y  ++    +       L + S 
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +++     D F Y  +I     + R++EA   +++M   G   + V+YNTLI+ YCKEG 
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYN 361
           +E A  +  +M ++G E +  T + LIDG CKAG ++ A  L+ E + K G   ++ AY 
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYT 477

Query: 362 CIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            ++D   KDG    A  + + M+      + FT S ++  LCK  R+  A KL L+
Sbjct: 478 ALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 191/395 (48%), Gaps = 9/395 (2%)

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           + +L+R+  +  +P+V  +  LI   +   L+  +L +     +M + P + + N ++  
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L + G+ D   +V+ DM+    +P   T+  +++G C+      A R+F  + +    P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +V Y ILI+GLC   R+  A  + + + +SG  PN  TY T+M    +    K  LE+  
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   +   +  +I    K   +  A  ++  M + GV  +I  YN LI+ YCK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L  A  L  E+EK     D +T++ILI GLC    ++ A   L+ M K GF  N   YN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D   K+G ++ AI V   M  K    +  T+S+++   CKA ++ +A  L    +  
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           G+     A  A++DG    G  +EA ++  +++ A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 11/212 (5%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           ++  G  P ++   SL+      G   +A+ +F ++   +L   T+    +++    N+ 
Sbjct: 657 VINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTS----VISAYVDNQR 712

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + AL++FR +Q     P++VT  + +      G L    WI   +   G   +     +
Sbjct: 713 PNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNS 772

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD- 281
           ++     N   K G EI +A +      +   +  V+ A    G ++E   +   M  D 
Sbjct: 773 LI-----NMYSKCG-EIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDY 826

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            ++  I  +  +++L C+ G L  AY  + +M
Sbjct: 827 SLRPRISHFGCMVDLLCRAGLLTEAYEFILKM 858



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 5/161 (3%)

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + +VI+A+V   R  +A     QM  D VQ DIV+    ++     G L+    +   +
Sbjct: 699 SWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYI 758

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
             +G + D   +  LI+   K G I  A R  L   N + F   L A  C    L ++GK
Sbjct: 759 RHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMA--CSHAGLVEEGK 816

Query: 373 IDHAINVFESMEVKDSFT-YSSMVHNLCKAKRLPSASKLLL 412
             H  ++ E   ++   + +  MV  LC+A  L  A + +L
Sbjct: 817 -QHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFIL 856


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 212/397 (53%), Gaps = 4/397 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ +RL  A A++   ++LG  PD+VT N L++ +C          ++++M E
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VT+ +LI G   ++  S ++ L+D M++ G  PD+ +Y ++++ L + G  D 
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      ++ +++ LCK R+ D+AL +F  ++  G  P ++TY+ LI 
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T++ ++    +  K     ++   M ++    
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y ++I  F  + RL EA   +E M+      ++V+YNTLIN +CK  +++    L 
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+T LI G  +A +   A++  + M  +G   N+  YN ++D L K+
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           GK+  A+ VFE ++      D +TY+ M+  +CKA +
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 170/319 (53%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A+I   ++ G  PD+VTY  +++  C+    D    +LN+M  A I  +VV Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           +++I    +      +L+L  EM   G+ P+V +Y+SL+ CL   G+  +A+R+  DMI 
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TF+ +++   K      A +++  + K    P + TY+ LI G C   RL  
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ +L+ +      PN +TY T++    + ++   G+E+   M ++G   +   Y T+I 
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            F +      A    +QMV+ GV  +I++YN L++  CK GKL  A ++ + +++   E 
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 321 DKYTHTILIDGLCKAGNIK 339
           D YT+ I+I+G+CKAG  K
Sbjct: 497 DIYTYNIMIEGMCKAGKWK 515



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 200/403 (49%), Gaps = 4/403 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
            P ++ ++ L+ A  +   FD   +   +M   GIS ++ TYN LI    R S LS +L 
Sbjct: 75  FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LL +M+++G  PD+ + NSL++      +  +A  +   M+     P T TF  +++GL 
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            +     A+ +   + + G  P+LVTY  ++ GLCK G    A  +L ++  +    N +
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y+T++    + R     L + + M+ KG   +   Y ++I+     GR  +A+  +  M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   +  ++V+++ LI+ + K+GKL  A  L +EM K+  + + +T++ LI+G C    +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A+  LE M +     N+  YN +++   K  ++D  + +F  M     V ++ TY+++
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +H   +A+   +A  +    +  GV         ++DGL  +G
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 129/259 (49%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK    + A  +  +    GV P+V+TY+ LI   C +  +     +L+ M E  I+P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++VT+++LI    +   L  +  L +EM++  I P++++Y+SL++    L +  EA ++ 
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + MI  D  P   T+N ++NG CK +  D  + +FR + + G V   VTY  LI G  +A
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A+ + K++   G  PN +TY  ++    +N K    + +   ++R     D + Y
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501

Query: 256 CTVIAAFVKIGRLKEATDY 274
             +I    K G+ K    Y
Sbjct: 502 NIMIEGMCKAGKWKMGGIY 520



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 41/323 (12%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A  +F  M      P    F+ +L+ + K    D  +     ++  G    L TYNIL
Sbjct: 60  DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119

Query: 189 I-----------------------------------KGLCKAGRLRTARWILKELGDSGH 213
           I                                    G C   R+  A  ++ ++ + G+
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +T+TT++   F + K    + ++  M ++G   D   Y  V+    K G    A +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            + +M    ++ ++V Y+T+I+  CK    + A  L  EME +G   +  T++ LI  LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----- 388
             G    A   L  M +   + NL  ++ ++D   K GK+  A  ++E M +K S     
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRSIDPNI 358

Query: 389 FTYSSMVHNLCKAKRLPSASKLL 411
           FTYSS+++  C   RL  A ++L
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQML 381



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A+ +F  + +    P ++ ++ L+  + K  +        +++   G + N  TY  +
Sbjct: 60  DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + C  R  +  L L +L  M + GY  D     +++  F    R+ +A   ++QMV  G 
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + D V++ TLI+      K   A  L+D M ++G + D  T+  +++GLCK G+   A  
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L  M     ++N+  Y+ ++D L K    D A+N+F  ME K    +  TYSS++  LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              R   AS+LL   ++  +        A++D     G   +A+K+  ++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 4/252 (1%)

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  S   P+ I ++ ++    +  K+ L +     M+  G + + + Y  +I  F +  R
Sbjct: 69  MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L  A   + +M+  G + DIV+ N+L+N +C   ++  A  L+D+M + G++ D  T T 
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           LI GL        A   ++ M + G   +L  Y  +V+ L K G  D A+N+   ME   
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              +   YS+++ +LCK +    A  L       GVR       +++  L + G   +A 
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308

Query: 444 KIQSKIRMAKIS 455
           ++ S +   KI+
Sbjct: 309 RLLSDMIERKIN 320


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 206/414 (49%), Gaps = 6/414 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + ++CK  ++++   ++ +  R G  P+ VTYN+LI+   +   F+    ++  M +
Sbjct: 238 NTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 297

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     TYN LI G     +L+ +L L +EM+  G  P V +YNS ++ L +LG+  +
Sbjct: 298 TGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 357

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +   DM+  +L P   ++N ++ G C+      A  +F  L+     P +VTYN L+ 
Sbjct: 358 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L  A+ +  E+ + G AP+ +TYT ++    +     +  E    M  +G   
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y T I   +K+G    A    E+M+  G   D++ YN +++  CK G LE A  LL
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +M   G   D  T+T +I    + G + KG  +  E ++K G   ++  Y  ++     
Sbjct: 538 QKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK-GLTPSVVTYTVLIHGHAG 596

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            G+++ A   F  M+ K    +  TY+S+++ LCK +R+  A       ++ G+
Sbjct: 597 KGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 189/373 (50%), Gaps = 1/373 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+  A   + D +   +LPDVV+YN LI  YC+  +    + + + +R 
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P +VTYN+L+ G  R   L  +  L  EM+  GI PD+ +Y  L++   ++G    
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M+   L   +  +   + G  K   T  A  +   +   GF P+L+ YN+++ 
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 522

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G L  A  +L+++   G  P+ +TYT+I+     N + + G EI   M  KG T 
Sbjct: 523 GLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTP 582

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I      GRL+ A  Y  +M   G+  ++++YN+LIN  CK  +++ AY   
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +KY++TILI+  C  GN + A    + M   G   +   ++ ++ +LGKD
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702

Query: 371 GKIDHAINVFESM 383
            K+  A+   ES+
Sbjct: 703 CKL-QAVRQLESL 714



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 6/372 (1%)

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI   ++ S++   L + D+M++  + PDV + N ++  L       +A  V++ M    
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P   T+N +L+  CK       L +   +Q+ G  P  VTYN+LI GL K G    A+
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            ++ E+  +G   +A TY  ++   F        L +   M  KG +     Y + I   
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K+GR+ +A   +  M+ + +  D+VSYNTLI  YC+ G L  A+LL DE+         
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409

Query: 323 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            T+  L+DGLC+ G ++ A +L +E +N+ G   ++  Y  +V+   K G +  A   F+
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 468

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M  +    DS+ Y++ +    K      A  L    L  G          VVDGL   G
Sbjct: 469 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 528

Query: 438 CRREAKKIQSKI 449
              EA ++  K+
Sbjct: 529 NLEEASELLQKM 540



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 1/203 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ V   CK   LE+A  ++   +  GV+PD VTY  +I A+ +      G  I   M
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++P VVTY  LI G      L  +     EM E GI P+V +YNSL++ L ++ + 
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM 635

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   F +M+   + P   ++ I++N  C       AL +++ +   G  P+  T++ L
Sbjct: 636 DQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695

Query: 189 IKGLCKAGRLRTARWILKELGDS 211
           +K L K  +L+  R  L+ L DS
Sbjct: 696 LKQLGKDCKLQAVRQ-LESLLDS 717


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 218/423 (51%), Gaps = 6/423 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ KA  ++   I  G++PD  +Y  L+ + C+  +      ++++M E G   +
Sbjct: 107 LCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTN 166

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYNSL+ G   +  L+ SL LLD +++ G+ P+ ++Y+ L+   ++    DEA+++  
Sbjct: 167 TATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLD 226

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L GLCK   T++A+++FR L   GF P +V+YNIL++ LC  G
Sbjct: 227 EIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEG 286

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L E+     +P+ +TY  ++     + + +  LE+L  M R  +      Y 
Sbjct: 287 RWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYN 346

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EK 315
            +IA   K  ++      ++QM+      +  +YN +  L C+EG ++ A+ ++  +  K
Sbjct: 347 PIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATL-CEEGMVQEAFSIIQSLGNK 405

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           Q F   ++ + I+I  LC+ GN   A   L  M K GF  +   Y+ ++  L  +G ++ 
Sbjct: 406 QHFSTQEF-YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNE 464

Query: 376 AINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           AI +F  ME     D+  Y+S++   CK++R   A  +    +  G    ++    +V+G
Sbjct: 465 AIEIFSVMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEG 524

Query: 433 LRH 435
           + H
Sbjct: 525 IIH 527



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 141/284 (49%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M+E G  PDV+    L++ L +  K  +A +V + MI   + P  A++  +++ LC+
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+++   ++++G+     TYN L++GLC  G L  +  +L  L   G  PNA T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ +++  ++ R      ++L  +  KG   +   Y  ++    K GR ++A     ++ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   ++VSYN L+   C EG+ E A +LL EM+         T+ ILI  L   G  +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A   LE M +  F     +YN I+ RL KD K+D  +   + M
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 176/389 (45%), Gaps = 2/389 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++  ++   I+ G++P+  TY+ L++A  +    D    +L
Sbjct: 166 NTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLL 225

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++ L  E+   G  P+V SYN L+  L   
Sbjct: 226 DEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNE 285

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EAN +  +M   + +P T T+NI++  L  +  T++AL +   + +  F P   +Y
Sbjct: 286 GRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSY 345

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LCK  ++      L ++      PN  TY  I   C      +    I+ ++  
Sbjct: 346 NPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLC-EEGMVQEAFSIIQSLGN 404

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K +      Y  VI +  + G    A   + +M   G   D  +Y++LI   C EG L  
Sbjct: 405 KQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNE 464

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +   ME +  + D   +  LI G CK+     A    E M   G+ +N   Y  +V+
Sbjct: 465 AIEIFSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVE 523

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            +  + ++D A  V   ++++D    S++
Sbjct: 524 GIIHEKEMDLATEVLRELQLRDVINQSTV 552



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 2/312 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    N+ +   CK  R E A  +  +    G  P+VV+YN+L+ + C    ++   
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L  M     SP  VTYN LI   T +     +L++L+EM+     P   SYN ++  L
Sbjct: 293 VLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +  K D   +    M+     P   T+N +   LC+      A  + + L         
Sbjct: 353 CKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQ 411

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             Y I+I  LC+ G    A  +L E+   G  P++ TY+++++           +EI S 
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSV 471

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ +    D   Y ++I    K  R   A D  E MV  G   +  +Y  L+     E +
Sbjct: 472 ME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKE 530

Query: 303 LEAAYLLLDEME 314
           ++ A  +L E++
Sbjct: 531 MDLATEVLRELQ 542



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 4/222 (1%)

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  RL  A + L+ + + G  P+    T ++    +  K +  ++++  M   G   D  
Sbjct: 74  KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++++  + G +  A   +++M   G   +  +YN+L+   C  G L  +  LLD +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G   + YT++ L++   K      A   L+ +   G   NL +YN ++  L K+G+ 
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           + A+ +F  +  K    +  +Y+ ++ +LC   R   A+ LL
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLL 295


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 218/423 (51%), Gaps = 6/423 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ KA  ++   I  G++PD  +Y  L+ + C+  +      ++++M E G   +
Sbjct: 107 LCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTN 166

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYNSL+ G   +  L+ SL LLD +++ G+ P+ ++Y+ L+   ++    DEA+++  
Sbjct: 167 TATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLD 226

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L GLCK   T++A+++FR L   GF P +V+YNIL++ LC  G
Sbjct: 227 EIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEG 286

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L E+     +P+ +TY  ++     + + +  LE+L  M R  +      Y 
Sbjct: 287 RWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYN 346

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EK 315
            +IA   K  ++      ++QM+      +  +YN +  L C+EG ++ A+ ++  +  K
Sbjct: 347 PIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATL-CEEGMVQEAFSIIQSLGNK 405

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           Q F   ++ + I+I  LC+ GN   A   L  M K GF  +   Y+ ++  L  +G ++ 
Sbjct: 406 QHFSTQEF-YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNE 464

Query: 376 AINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           AI +F  ME     D+  Y+S++   CK++R   A  +    +  G    ++    +V+G
Sbjct: 465 AIEIFSVMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEG 524

Query: 433 LRH 435
           + H
Sbjct: 525 IIH 527



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 141/284 (49%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M+E G  PDV+    L++ L +  K  +A +V + MI   + P  A++  +++ LC+
Sbjct: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+++   ++++G+     TYN L++GLC  G L  +  +L  L   G  PNA T
Sbjct: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ +++  ++ R      ++L  +  KG   +   Y  ++    K GR ++A     ++ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   ++VSYN L+   C EG+ E A +LL EM+         T+ ILI  L   G  +
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A   LE M +  F     +YN I+ RL KD K+D  +   + M
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 176/389 (45%), Gaps = 2/389 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++  ++   I+ G++P+  TY+ L++A  +    D    +L
Sbjct: 166 NTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLL 225

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++ L  E+   G  P+V SYN L+  L   
Sbjct: 226 DEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNE 285

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EAN +  +M   + +P T T+NI++  L  +  T++AL +   + +  F P   +Y
Sbjct: 286 GRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSY 345

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LCK  ++      L ++      PN  TY  I   C      +    I+ ++  
Sbjct: 346 NPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLC-EEGMVQEAFSIIQSLGN 404

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K +      Y  VI +  + G    A   + +M   G   D  +Y++LI   C EG L  
Sbjct: 405 KQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNE 464

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +   ME +  + D   +  LI G CK+     A    E M   G+ +N   Y  +V+
Sbjct: 465 AIEIFSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVE 523

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            +  + ++D A  V   ++++D    S++
Sbjct: 524 GIIHEKEMDLATEVLRELQLRDVINQSTV 552



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 2/312 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    N+ +   CK  R E A  +  +    G  P+VV+YN+L+ + C    ++   
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEAN 292

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L  M     SP  VTYN LI   T +     +L++L+EM+     P   SYN ++  L
Sbjct: 293 VLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +  K D   +    M+     P   T+N +   LC+      A  + + L         
Sbjct: 353 CKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQ 411

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             Y I+I  LC+ G    A  +L E+   G  P++ TY+++++           +EI S 
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSV 471

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ +    D   Y ++I    K  R   A D  E MV  G   +  +Y  L+     E +
Sbjct: 472 ME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKE 530

Query: 303 LEAAYLLLDEME 314
           ++ A  +L E++
Sbjct: 531 MDLATEVLRELQ 542



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 4/222 (1%)

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  RL  A + L+ + + G  P+    T ++    +  K +  ++++  M   G   D  
Sbjct: 74  KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++++  + G +  A   +++M   G   +  +YN+L+   C  G L  +  LLD +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G   + YT++ L++   K      A   L+ +   G   NL +YN ++  L K+G+ 
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           + A+ +F  +  K    +  +Y+ ++ +LC   R   A+ LL
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLL 295


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 209/412 (50%), Gaps = 4/412 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+    N  +   CK  +  +A  +  D +  G  PDV TY  +I+  C+     A   
Sbjct: 189 QLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAG 248

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M EAG  PDVVTY+++I    ++  ++ +LD+   M   GI P++++YNSL+  L 
Sbjct: 249 LFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLC 308

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              +  EA+ +  +M+  ++ P   TF++++N  CK      A  + + + + G  P +V
Sbjct: 309 NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV 368

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ L+ G      +  AR +   +   G  P+  +Y  ++    + ++     ++ + M
Sbjct: 369 TYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 428

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G T D   Y T+I    ++GRL+EA D  + M+T+G   D+ +Y+ L++ +CK+G L
Sbjct: 429 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 488

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A+ L   M+    + +   + ILID +CK+ N+K AR     +   G   N++ Y  I
Sbjct: 489 AKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTI 548

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           ++ L K+G +D A+  F +ME      + F+Y+ ++    + K    A +L+
Sbjct: 549 INGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLI 600



 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 205/410 (50%), Gaps = 4/410 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD  T +MLI+ + Q    D G+++L ++ + G+   +VT+N+LI G  +      +
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L D+M+  G  PDV +Y ++++ L ++G+   A  +F+ M      P   T++ +++ 
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+R  + AL +F  ++  G  P + TYN LI+GLC   R R A  +L E+      PN
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T++ ++    +         +L  M   G   +   Y +++  +     + EA    +
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFD 391

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+T G + D+ SYN LIN YCK  ++  A  L +EM  QG   D  ++  LIDGLC+ G
Sbjct: 392 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 451

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A    + M   G   +L  Y+ ++D   K G +  A  +F +M+      +   Y+
Sbjct: 452 RLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 511

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            ++  +CK++ L  A KL       G++        +++GL   G   EA
Sbjct: 512 ILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA 561



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 209/435 (48%), Gaps = 40/435 (9%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVW 113
           F + D      N M      P ++ +N L++   +      ++  L + +E+ G+ PD +
Sbjct: 99  FRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTY 158

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + + L++C FQL + D    V   +I   L     TFN ++NGLCK      A+ +F  +
Sbjct: 159 TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM 218

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G+ P++ TY  +I GLCK G    A  + +++G++G  P+ +TY+TI+    ++R+ 
Sbjct: 219 VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L+I S MK KG + + F Y ++I       R +EA+  + +M++  +  +IV+++ L
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFE---------------------------------- 319
           IN++CKEG +  A  +L  M + G E                                  
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398

Query: 320 -CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D +++ ILI+G CKA  I  A+     M   G   ++ +YN ++D L + G++  A +
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +F++M     + D  TYS ++   CK   L  A +L  +   + ++        ++D + 
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 518

Query: 435 HSGCRREAKKIQSKI 449
            S   +EA+K+ S++
Sbjct: 519 KSRNLKEARKLFSEL 533



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 170/342 (49%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R+ +A  I       G+ P++ TYN LI   C F  +     +LN M    I P
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++VT++ LI    +   +  +  +L  M EMG+ P+V +Y+SLM+      +  EA ++F
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             MI     P   ++NI++NG CK +    A ++F  +   G  P++V+YN LI GLC+ 
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GRLR A  + K +  +G+ P+  TY+ ++    +         +  AM+      +   Y
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I A  K   LKEA     ++   G+Q ++  Y T+IN  CKEG L+ A      ME+
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
            G   +++++ ++I G  +  +   A   +  M + GF +++
Sbjct: 571 DGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 165/314 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C  +R  +A A++ + + L ++P++VT+++LI+ +C+  +      +L  M E
Sbjct: 301 NSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTE 360

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTY+SL+ G +  + +  +  L D M+  G  PDV+SYN L++   +  +  E
Sbjct: 361 MGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGE 420

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F +MI   LTP   ++N +++GLC+      A  +F+ +  +G +P+L TY+IL+ 
Sbjct: 421 AKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLD 480

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G L  A  + + +  +   PN + Y  ++    ++R  K   ++ S +  +G   
Sbjct: 481 GFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP 540

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I    K G L EA +    M  DG   +  SYN +I  + +      A  L+
Sbjct: 541 NVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLI 600

Query: 311 DEMEKQGFECDKYT 324
            EM ++GF  D  T
Sbjct: 601 GEMREKGFVADVAT 614



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +   CK+  L++A  +  +    G+ P+V  Y  +I+  C+    D        M
Sbjct: 509 MYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 568

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
            E G  P+  +YN +I G  ++   S ++ L+ EM E G   DV +
Sbjct: 569 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 5/193 (2%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD-EMEKQGFECDKYTHT 326
           + +A  Y   M+    +  I+ +N L++   K      A + L  +ME  G   D YT  
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           +LI+   +   +      L  + K+G    +  +N +++ L K GK   A+ +F+ M  +
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 387 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               D  TY+++++ LCK     +A+ L     ++G +        ++D L       EA
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 443 KKIQSKIRMAKIS 455
             I S ++   IS
Sbjct: 282 LDIFSYMKAKGIS 294


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 199/367 (54%), Gaps = 2/367 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+L+  + +     +   + + MR + + P VVT+N+LI+G  R   L   
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAV 239

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L  EM ++G+ PDV++Y +L+    + G+ + A ++F +M    + P    F  +++ 
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    +  + +++ ++  G +P+LV YN L+ GLC+A  L+ A  I++E+ ++G  P+
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYTT++  C ++ K  + ++I   M  K  + D   Y  +I+   K GR  +A   + 
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+   ++ D  +Y  +I+ +C++G ++  + LL EM+ +G +    T+ ++++GLCK G
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFTYSSMV 395
            +K A + L  M  IG   +   YN ++D   K GK+ ++  +  S   V D   Y+S++
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMVPDFAVYTSLI 539

Query: 396 HNLCKAK 402
             L K K
Sbjct: 540 SELAKKK 546



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 5/350 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           ++L+ G+ P+   +N LM    +LG+   A +VF +M    + P   TFN +++G+C+ R
Sbjct: 176 QLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRAR 234

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D    +++ +   G  P++ TY  LIKG C+ GR+  A  +  E+ D+G  PNA+ +T
Sbjct: 235 DLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFT 294

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    +      G+++   M+ +G   D   Y  ++    +   LK A   +E+M   
Sbjct: 295 TLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNA 354

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D V+Y TLI+  CK+GKL+ A  +  +M ++    D+ T+T LI GL KAG    A
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDA 414

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 397
              L  M +   + +   Y  ++D   + G +     + + M+ K       TY+ +++ 
Sbjct: 415 ERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNG 474

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           LCK  ++ +A  LL + L  GV         ++DG    G    +++++S
Sbjct: 475 LCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES 524



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 163/326 (50%), Gaps = 5/326 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+A  L+  + +  +   +GV PDV TY  LI  +C+    +    + N MR
Sbjct: 223 FNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMR 282

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++P+ V + +LI    +   ++  +DL  +M   G+ PD+ +YN+L++ L +     
Sbjct: 283 DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK 342

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + ++M    L P   T+  +++G CK+   D A+ + + + +     + VTY  LI
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL KAGR   A  +L+E+ ++   P+  TYT ++    R    K G ++L  M+ KG  
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKK 462

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  ++    K+G++K A   +  M+  GV  D ++YN L++  CK GK+  +   
Sbjct: 463 PGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS--- 519

Query: 310 LDEME-KQGFECDKYTHTILIDGLCK 334
            +E+E  +G   D   +T LI  L K
Sbjct: 520 -EELESSKGMVPDFAVYTSLISELAK 544



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 9/282 (3%)

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           T  A   +  L   G  PE   +N+L++   + G L +AR +  E+  S   P  +T+ T
Sbjct: 167 TPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQ-PTVVTFNT 225

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R R       +   M   G   D + Y  +I  F + GR++ A     +M   G
Sbjct: 226 LISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG 285

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           V  + V + TLI+ +CKEG + A   L  +M  +G   D   +  L++GLC+A N+K A 
Sbjct: 286 VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             +E M   G   +   Y  ++D   KDGK+D A+++ + M  K    D  TY++++  L
Sbjct: 346 SIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGL 405

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            KA R   A ++L   +++ +    +    V+D      CR+
Sbjct: 406 SKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF----CRK 443



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 5/198 (2%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           FV++G L  A    ++M    VQ  +V++NTLI+  C+   L+A   L  EM   G + D
Sbjct: 196 FVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPD 254

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            YT+  LI G C+ G ++ A      M   G + N   +  ++D   K+G ++  +++++
Sbjct: 255 VYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQ 314

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M V+    D   Y+++V+ LC+A+ L +A  ++     +G++  K     ++DG    G
Sbjct: 315 DMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDG 374

Query: 438 CRREAKKIQSKIRMAKIS 455
               A  I+ K+   ++S
Sbjct: 375 KLDMAMDIKQKMAEKEVS 392


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 203/419 (48%), Gaps = 19/419 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R ++A   +      G+ P+++T+NM+I+  C+         +L  M  
Sbjct: 22  NTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSR 81

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN+L+ G  +      +L L  EM+  G+ P+V +Y SL++ + + G  + 
Sbjct: 82  KGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNR 141

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F  M    L P   T+  ++NG  +    D A R+   + + GF+P +VTYN LI 
Sbjct: 142 AMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALIN 201

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  GR+  A  +L+++   G  P+ ++Y+TI+    RN++     ++   M  K    
Sbjct: 202 GHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLP 261

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I    +  RL EA D  ++M+T  +  D  +Y TLIN YCKEG L  A  L 
Sbjct: 262 DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLH 321

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKI--GFDSNLEAYNC--- 362
           DEM ++GF  D  T+ +LI+GL K    K AR   L L Y + I      N    NC   
Sbjct: 322 DEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNI 381

Query: 363 -------IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
                  +V      G +D A  VFESM  K    +   Y+ ++H  C+   +  A KL
Sbjct: 382 EFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKL 440



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 4/356 (1%)

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G      M   G  P+VVTYN++I G  +      +   L  M   G+ P++ ++N +++
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L + G+  E + V  +M      P   T+N ++NG CK      AL +   + ++G  P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  LI  +CKAG L  A     ++   G  PN  TYTTI+    +         +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M R G+      Y  +I     +GR++EA   ++ MV  GV  D+VSY+T+I+ + + 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            +L+ A+ +  EM  +    D  T++ LI GLC+   +  A    + M  I    +   Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
             +++   K+G ++ A+++ + M  K    D+ TY+ +++ L K  R   A +LLL
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLL 357



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 184/385 (47%), Gaps = 37/385 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   L++A  ++ +  R G +P +VTYN LI+ +C     +    +L  M   G+ PD
Sbjct: 168 FAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+Y+++I+G  RN  L  +  +  EM+   + PD  +Y+SL+  L +  +  EA  +FQ
Sbjct: 228 VVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQ 287

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P   T+  ++N  CK    + AL +   + + GF+P+ VTYN+LI GL K  
Sbjct: 288 EMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQA 347

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           R + AR +L +L      P+A+TY T+++ CC         +E  SA+            
Sbjct: 348 RSKEARRLLLKLFYDDSIPSAVTYNTLIENCC--------NIEFKSAV------------ 387

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++  F   G + EA    E M+    + +   YN +I+ +C+ G +  AY L  EM  
Sbjct: 388 -ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM-- 444

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD-------SNLEAYNCIVDRLG 368
                D   HT+ +  L KA   +G    L   N++  D       ++ E    +V+   
Sbjct: 445 --VHVDFVPHTVTVLALVKALFTEGMDGEL---NEVIGDILRSCKLTDAELSKVLVEINQ 499

Query: 369 KDGKIDHAINVFESMEVKDSFTYSS 393
           K+G +D   N+   M  KD    S+
Sbjct: 500 KEGNMDMVFNLLTEM-AKDGLIPST 523



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 150/287 (52%), Gaps = 4/287 (1%)

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R F++M      P   T+N M++G CK + TD A    R +   G  P L+T+N++I GL
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C+ GRL+    +L E+   G+ P+ +TY T++    +   +   L + + M R G + + 
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y ++I +  K G L  A ++ +QM   G+  +  +Y T+IN + ++G L+ AY +L+E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M + GF     T+  LI+G C  G ++ A   L+ M   G   ++ +Y+ I+    ++ +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 373 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           +D A  +   M     + D+ TYSS++  LC+ +RL  A  +    L
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 6/358 (1%)

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L    EM   G  P+V +YN+++    +L + DEA    + M    L P   TFN+++NG
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC++        +   + + G+VP+ VTYN L+ G CK G    A  +  E+  +G +PN
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYT+++    +       +E    M  +G   +   Y T+I  F + G L EA   + 
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G    IV+YN LIN +C  G++E A  LL +M  +G   D  +++ +I G  +  
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 337 NIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
            +  A ++ +E + K      +  Y+ ++  L +  ++  A ++F+ M       D FTY
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAV-TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +++++  CK   L  A  L    ++ G          +++GL      +EA+++  K+
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           +GL     M+R G   +   Y T+I  + K+ R  EA  ++  M   G++ +++++N +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  C++G+L+    +L EM ++G+  D+ T+  L++G CK GN   A +    M + G  
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            N+  Y  +++ + K G ++ A+  F+ M V+    +  TY+++++   +   L  A ++
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 411 LLSCLKSGVRILKSAQKAVVDG 432
           L    +SG         A+++G
Sbjct: 181 LNEMTRSGFIPSIVTYNALING 202


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 223/468 (47%), Gaps = 27/468 (5%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   L  A  +  + I  G+ P+VVTYN L+  +C        +++LN M
Sbjct: 205 MYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM 264

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +   I+PDV T+N+LI    +   +  +  +L  M++  I PDV +YNSL+   F L K 
Sbjct: 265 KLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKV 324

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  VF  M    +TP   T+  M++GLCK +  D A+ +F  ++    +P++VTY  L
Sbjct: 325 KNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSL 384

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK   L  A  + K++ + G  P+  +YT ++    +  + +   E    +  KGY
Sbjct: 385 IDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGY 444

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-NLYCKEG------ 301
             +   Y  +I    K     EA D   +M   G   D +++ T+I  L+ K+       
Sbjct: 445 HLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEK 504

Query: 302 ----------------KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
                           +L+ A ++L  M K   + D  T+  L+DG      +K A+   
Sbjct: 505 ILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVF 564

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKA 401
             M ++G   N++ Y  ++D L K   +D A+++FE M+ K+ F    TY+S++  LCK 
Sbjct: 565 YSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKN 624

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             L  A  LL    + G++    +   ++DGL  SG    AK+I  ++
Sbjct: 625 HHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 212/426 (49%), Gaps = 27/426 (6%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+++ A+ +     + GV P+V TY  +ID  C+    D   ++   M+   + PD+VTY
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
            SLI G  +N  L  ++ L  +M E GI PDV+SY  L+  L + G+ + A   FQ ++ 
Sbjct: 382 TSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLV 441

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI----------- 189
                   T+N+M+NGLCK      A+ +   ++  G +P+ +T+  +I           
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 501

Query: 190 ----------KGLCKAG--RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
                     +GL +A   RL+ A+ +L  +  +   P+ +TY T+M   F   + K   
Sbjct: 502 AEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            +  +M + G T +   Y  +I    K   + EA    E+M    +  +IV+Y +LI+  
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDAL 621

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK   LE A  LL EM++ G + D Y++TIL+DGLCK+G ++GA+   + +   G+  N+
Sbjct: 622 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
           + Y  +++ L K G  D A+++   ME K    D+ T+  ++  L +      A K+L  
Sbjct: 682 QVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXE 741

Query: 414 CLKSGV 419
            +  G+
Sbjct: 742 MIARGL 747



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 201/415 (48%), Gaps = 4/415 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC    +  A +++ + ++ G  P+ +T N LI   C            +++ 
Sbjct: 101 LNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVV 160

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   + V+Y +LI G  +         LL ++    + PDV  YN+++H L +     
Sbjct: 161 AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLG 220

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  ++ +MI   ++P   T+N ++ G C   +   A  +   ++     P++ T+N LI
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLI 280

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L K G+++ A+ +L  +  +   P+ +TY +++   F   K K    +  +M + G T
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I    K   + EA    E+M    +  DIV+Y +LI+  CK   LE A  L
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M++QG + D Y++TIL+D LCK G ++ A+   + +   G+  N++ YN +++ L K
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
                 A+++   ME K    D+ T+ +++  L +      A K+L   +  G++
Sbjct: 461 ADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 188/378 (49%), Gaps = 4/378 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD+ T N+L++ +C        +++L  + + G  P+ +T N+LI G      +  +
Sbjct: 93  GATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKA 152

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   +  SY +L++ L + G+     R+ + +    + P    +N +++ 
Sbjct: 153 LYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHS 212

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCKN+   +A  ++  +   G  P +VTYN L+ G C  G L+ A  +L E+      P+
Sbjct: 213 LCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPD 272

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+ T++    +  K K    +L+ M +     D   Y ++I  +  + ++K A     
Sbjct: 273 VCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY 332

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  ++ +Y T+I+  CKE  ++ A  L +EM+ +    D  T+T LIDGLCK  
Sbjct: 333 SMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNH 392

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           +++ A    + M + G   ++ +Y  ++D L K G++++A   F+ + VK    +  TY+
Sbjct: 393 HLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYN 452

Query: 393 SMVHNLCKAKRLPSASKL 410
            M++ LCKA     A  L
Sbjct: 453 VMINGLCKADLFGEAMDL 470



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 175/389 (44%), Gaps = 4/389 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            +RM      P    +N +++    N      + L  +    G  PD+ + N LM+C   
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           L     A  V  +++     P   T N ++ GLC       AL     +   GF    V+
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCK G  +    +L++L      P+ + Y TI+    +N+      ++ S M 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG + +   Y  ++  F  +G LKEA   + +M    +  D+ ++NTLI+   KEGK++
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           AA ++L  M K   + D  T+  LIDG      +K A+     M + G   N+  Y  ++
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K+  +D A+++FE M+ K    D  TY+S++  LCK   L  A  L     + G++
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               +   ++D L   G    AK+   ++
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRL 439



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 23/325 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RLE A+      +  G   +V TYN++I+  C+   F     + ++M   G  PD
Sbjct: 423 LCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-----------------------IPPDVW 113
            +T+ ++I           +  +L EM+  G                       I PDV 
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVV 542

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y +LM   F + +   A  VF  M    +TP    + IM++GLCK +  D A+ +F  +
Sbjct: 543 TYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEM 602

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +     P +VTY  LI  LCK   L  A  +LKE+ + G  P+  +YT ++    ++ + 
Sbjct: 603 KHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRL 662

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +   EI   +  KGY  +   Y  +I    K G   EA D   +M   G   D V+++ +
Sbjct: 663 EGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDII 722

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGF 318
           I    ++ + + A  +L EM  +G 
Sbjct: 723 IWALFEKDENDKAEKILXEMIARGL 747



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           F +  ++++ V            ++  ++G   D+ + N L+N +C    +  A+ +L  
Sbjct: 64  FHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLAN 123

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           + K+G+  +  T   LI GLC  G IK A    + +   GF  N  +Y  +++ L K G+
Sbjct: 124 ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGE 183

Query: 373 IDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
                 +   +E   VK D   Y++++H+LCK K L  A  L    +  G+        A
Sbjct: 184 TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNA 243

Query: 429 VVDGLRHSGCRREAKKIQSKIRMAKIS 455
           +V G    G  +EA  + +++++  I+
Sbjct: 244 LVYGFCIMGHLKEAFSLLNEMKLKNIN 270


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 223/451 (49%), Gaps = 11/451 (2%)

Query: 11  NICVCTFCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           NI +   C  NR ++A  ++    D    G  PDVV+Y  +I+ + +    D  Y+  + 
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + GI PDVVTYNS+IA   +   +  ++++L+ M++ G+ PD  +YNS++H     G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
           P EA    + M    + P   T++++++ LCKN     A ++F  + K G  PE+ TY  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILSAMKRK 246
           L++G    G L     +L  +  +G  P+   + +I+ C + N+ K    + + S M+++
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF-SILICAYANQGKVDQAMLVFSKMRQQ 400

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  VI    K GR+++A  Y EQM+ +G+    + YN+LI+  C   K E A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L+ EM  +G   +      +ID  CK G +  +    E M +IG   N+  YN +++ 
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
               GK+D A+ +   M       ++ TYS++++  CK  R+  A  L      SGV   
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
                 ++ GL  +  RR A   +  +R+ +
Sbjct: 581 IITYNIILQGLFQT--RRTAAAKELYVRITE 609



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 213/439 (48%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA  ++   ++ GV+PD +TYN ++  YC           L +MR 
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTY+ L+    +N     +  + D M + G+ P++ +Y +L+      G   E
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   + P    F+I++         D A+ +F  +++ G  P  VTY  +I 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+GR+  A    +++ D G +P  I Y +++       K++   E++  M  +G   
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + ++I +  K GR+ E+    E MV  GV+ ++++YNTLIN YC  GK++ A  LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M   G + +  T++ LI+G CK   ++ A +  + M   G   ++  YN I+  L + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 371 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +   A    + + ES    +  TY+ ++H LCK K    A ++  +     +++     
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++D L   G   EAK +
Sbjct: 655 NIMIDALLKVGRNDEAKDL 673



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 218/438 (49%), Gaps = 8/438 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + I+ G   D + +  L+   C    + DA   +L RM E G  P+
Sbjct: 98  CRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPN 157

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +YN L+ G    +    +L+LL  M +    G PPDV SY ++++  F+ G  D+A  
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   + P   T+N ++  LCK +  D A+ +   + K+G +P+ +TYN ++ G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G+ + A   LK++   G  P+ +TY+ +M    +N +     +I  +M ++G   +  
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++  +   G L E    ++ MV +G+  D   ++ LI  Y  +GK++ A L+  +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +QG   +  T+  +I  LCK+G ++ A L+ E M   G       YN ++  L    K 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A  +   M  +    ++  ++S++ + CK  R+  + KL    ++ GV+        +
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 430 VDGLRHSGCRREAKKIQS 447
           ++G   +G   EA K+ S
Sbjct: 518 INGYCLAGKMDEAMKLLS 535



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 195/419 (46%), Gaps = 13/419 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PD+ TY +LI   C+    D G+  L  + + G   D + +  L+ G   +   S ++
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIM 153
           D+ L  M E+G  P+V+SYN L+  L    +  EA  +   M     G   P   ++  +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NG  K   +D A   +  +   G +P++VTYN +I  LCKA  +  A  +L  +  +G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY +I+     + + K  +  L  M+  G   D   Y  ++    K GR  EA  
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   D Y  +ILI    
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
             G +  A L    M + G + N   Y  ++  L K G+++ A+  FE M        + 
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            Y+S++H LC   +   A +L+L  L  G+ +      +++D    S C +E + I+S+
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID----SHC-KEGRVIESE 496



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  + + CK  R+ ++E +    +R+GV P+V+TYN LI+ YC     D    +
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M   G+ P+ VTY++LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN+ TD+AL+MF+ L       E  T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +      +G  PN  TY  + +        +   ++  +M+
Sbjct: 654 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D      ++   ++ G +  A  Y+  +      L+  + +  I+L    GK +
Sbjct: 714 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQ 772

Query: 305 AAYLLLDEMEKQGFE 319
             Y  L E  K   E
Sbjct: 773 EYYRFLPEKYKSFIE 787



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 189/410 (46%), Gaps = 43/410 (10%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ PD   +++LI AY      D    + ++MR+ G++P+ VTY ++I    ++  +
Sbjct: 363 VRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++ G+ P    YNSL+H L    K + A  +  +M+   +   T  FN +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P ++TYN LI G C AG++  A  +L  +   G 
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY+T++                             GYC       KI R+++A  
Sbjct: 543 KPNTVTYSTLIN----------------------------GYC-------KISRMEDALV 567

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K   +    L + + N    D  LEA  +N ++D L K G+ D A ++F +      V +
Sbjct: 628 K-NKLTDDALQM-FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +TY  M  N+     L    +L LS   +G  +       +V  L   G
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 199/431 (46%), Gaps = 20/431 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C +    ++++A  +     + G+ P+ VTY  +I   C+    +       +M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+SP  + YNSLI G    +    + +L+ EML+ GI  +   +NS++    + G+ 
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F+ M+   + P   T+N ++NG C     D A+++  G+   G  P  VTY+ L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + KE+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     +A    + +    ++L+  ++N +I+   K G+ + A  
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L       G   + +T+ ++      A NI G  L LE ++++    ++E   C VD   
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM------AENIIGQGL-LEELDQLFL--SMEDNGCTVD--- 720

Query: 369 KDGKIDHAI-NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-----VRIL 422
             G ++  +  + +  E+  + TY SM+     +    +AS L +  L  G      R L
Sbjct: 721 -SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS-LFIDLLSGGKYQEYYRFL 778

Query: 423 KSAQKAVVDGL 433
               K+ ++ L
Sbjct: 779 PEKYKSFIESL 789



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 151/333 (45%), Gaps = 14/333 (4%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 155
           + DE+L  G    ++  N  +  + +   P  A   +  M      ++TP   T+ I++ 
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHA 214
             C+    D        + K GF  + + +  L+KGLC   R   A   +L+ + + G  
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           PN  +Y  ++K  C  NR  +  LE+L  M   +  G   D   Y TVI  F K G   +
Sbjct: 156 PNVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A     +M+  G+  D+V+YN++I   CK   ++ A  +L+ M K G   D  T+  ++ 
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G C +G  K A   L+ M   G + ++  Y+ ++D L K+G+   A  +F+SM  +    
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  TY +++        L     LL   +++G+
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 35/240 (14%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TY  ++ CC R  +  LG   L  + +KG+  D   +  ++       R  +A D 
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 330
           + + +T+ G   ++ SYN L+   C E + + A  LL  M      G   D  ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G  K G+                D     Y+ ++DR                  + D  T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR----------------GILPDVVT 233

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y+S++  LCKA+ +  A ++L + +K+GV        +++ G   SG  +EA     K+R
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 215/437 (49%), Gaps = 5/437 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K     KA ++  +  R GV PDVVTYN++IDA C+  + D    +L +M  
Sbjct: 269 NTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN +I G      L  +  +  +M   G+ P++   NS +  L + G+  E
Sbjct: 329 NGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKE 388

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M      P   ++  +L+G     +  + + +F  ++ +G   +   +NILI 
Sbjct: 389 AAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIH 448

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K G +  A  I  E+   G +P+ +TY+T++    R  +    +E  + M  +G   
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQP 508

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAYLL 309
           +   Y ++I  F   G L +A + + +M+  G+ + DIV +N++IN  CK+G++  A+ +
Sbjct: 509 NTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDI 568

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D +   G   D  T T LIDG C  G +  A   L+ M  +G ++++  Y+ ++D   K
Sbjct: 569 FDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFK 628

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+I+  + +F  M+ K    ++ TY  M+  L +A R  +A K     ++SG  +  S 
Sbjct: 629 NGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 426 QKAVVDGLRHSGCRREA 442
              ++ GL  + C  EA
Sbjct: 689 YGIILGGLCRNNCADEA 705



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 192/402 (47%), Gaps = 8/402 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF-VSFDAGYTILNRMREAGISPD 76
           C+A R +    +    +R G+    +T + L+   C    + +A   +L+RM E G  P+
Sbjct: 168 CRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPN 227

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V +Y+ ++ G   NS+   +LDL   M + G    P+V +YN+++H  F+ G+  +A  +
Sbjct: 228 VFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSL 287

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F +M    + P   T+N++++ LCK R  D A  + R +  +G  P+ VTYN +I G   
Sbjct: 288 FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYAT 347

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL+ A  + +++   G  PN +   + +    ++ + K   EI  +M  KG+  D   
Sbjct: 348 LGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVS 407

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           YCT++  +   G   +       M ++G+  D   +N LI+ Y K G ++ A L+  EM+
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ 467

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +QG   D  T++ +I    + G +  A      M   G   N   Y+ I+      G + 
Sbjct: 468 QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLV 527

Query: 375 HAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLL 411
            A  +   M  K     D   ++S++++LCK  R+  A  + 
Sbjct: 528 KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 202/466 (43%), Gaps = 82/466 (17%)

Query: 1   MFGKLSTRLL--NICVC-----TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           MF K+ +R L  NI +C     + CK  R ++A  I       G  PD+V+Y  L+  Y 
Sbjct: 357 MFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYA 416

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
               F     + N M+  GI+ D   +N LI    +  ++  ++ +  EM + G+ PDV 
Sbjct: 417 SEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVV 476

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y++++    ++G+  +A   F  M+   + P TA ++ ++ G C +     A  +   +
Sbjct: 477 TYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEM 536

Query: 174 QKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
              G   P++V +N +I  LCK GR+  A  I   + D G  P+ IT+T+++        
Sbjct: 537 INKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLID------- 589

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
                                GYC V       G++ +A   ++ M   GV+ DIV+Y+T
Sbjct: 590 ---------------------GYCLV-------GKMDKAFKILDAMEVVGVETDIVTYST 621

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           L++ Y K G++     L  EM+++G + +  T+ I++ GL +AG    AR     M + G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM--------------------------EVK 386
               +  Y  I+  L ++   D AI +F+ +                          E K
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 387 DSF-------------TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + F             TY  M+ NL K   +  A+ +  S  KSG+
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 172/380 (45%), Gaps = 1/380 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+ NI +  + K   ++ A  I  +  + GV PDVVTY+ +I A+ +           N+
Sbjct: 441 RVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQ 500

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLG 126
           M   GI P+   Y+S+I G   +  L  + +L+ EM+  GIP PD+  +NS+++ L + G
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A+ +F  +      P   TF  +++G C     D A ++   ++  G   ++VTY+
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G  K GR+     + +E+   G  PN +TY  ++   FR  +     +    M   
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  ++    +     EA    +++ T  V+  I   NT+IN   K  + E A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L   +   G   ++ T+ ++I  L K G ++ A      M K G        N I+  
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRM 800

Query: 367 LGKDGKIDHAINVFESMEVK 386
           L + G+I  A N    ++ K
Sbjct: 801 LLEKGEIAKAGNYLSKVDGK 820



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 143/302 (47%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  + + CK  R+  A  I      +G  PDV+T+  LID YC     D  + IL+ M
Sbjct: 548 FFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM 607

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+  D+VTY++L+ G  +N  ++  L L  EM   G+ P+  +Y  ++  LF+ G+ 
Sbjct: 608 EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A + F +MI    T   + + I+L GLC+N   D A+ +F+ L        +   N +
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  + K  R   A+ +   +  SG  PN  TY  ++    ++   +    + S+M++ G 
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                    +I   ++ G + +A +Y+ ++    + L+  + + +++L+ ++GK      
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMK 847

Query: 309 LL 310
           LL
Sbjct: 848 LL 849



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 157/384 (40%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPD-----------------------------EANR----- 133
           +P  V +Y+ LM C  +  +PD                              ANR     
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212

Query: 134 --VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV--PELVTYNILI 189
             +   M      P   +++I+L GLC N  +  AL +F+ + K G    P +V YN +I
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K G    A  +  E+   G  P+ +TY  I+    + R       +L  M   G  
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  +  +GRLKEA     +M + G+  +IV  N+ +   CK G+ + A  +
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D M  +G + D  ++  L+ G    G           M   G  ++   +N ++    K
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M+ +    D  TYS+++    +  RL  A +     +  G++   + 
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
             +++ G    G   +AK++ S++
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEM 536



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 153/321 (47%), Gaps = 1/321 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC    L KA+ ++ + I  G+  PD+V +N +I++ C+       + I + + + G  P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERP 579

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV+T+ SLI G      +  +  +LD M  +G+  D+ +Y++L+   F+ G+ ++   +F
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M    + P T T+ IML GL +   T  A + F  + + G    +  Y I++ GLC+ 
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A  + ++LG      +     T++   ++ ++ +   E+ + +   G   +   Y
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I   +K G +++A +    M   G+       N +I +  ++G++  A   L +++ 
Sbjct: 760 GVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDG 819

Query: 316 QGFECDKYTHTILIDGLCKAG 336
           +    +  T ++++    + G
Sbjct: 820 KRILLEASTTSLMLSLFSRKG 840



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 116/271 (42%), Gaps = 38/271 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C   +++KA  I+     +GV  D+VTY+ L+D Y +    + G T+   M+  G+ P+
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY--------------------- 115
            VTY  ++AG  R      +     EM+E G    V  Y                     
Sbjct: 651 TVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQ 710

Query: 116 --------------NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                         N++++ ++++ + +EA  +F  +    L P  +T+ +M+  L K+ 
Sbjct: 711 KLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDG 770

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             ++A  MF  ++K G VP     N +I+ L + G +  A   L ++        A T +
Sbjct: 771 AVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTS 830

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            ++    R  KY   +++L A   K   FDG
Sbjct: 831 LMLSLFSRKGKYHEDMKLLPA---KYNFFDG 858



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 38/237 (16%)

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQ 277
           TY+ +M CC R R+  LGL +   + R G         T++       R +EA + +  +
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G   ++ SY+ ++   C     + A  L   M K+G  C                 
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSP--------------- 263

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
                             N+ AYN ++    K+G+   A ++F  M  +    D  TY+ 
Sbjct: 264 ------------------NVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNL 305

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++  LCKA+ +  A  +L     +G +        ++ G    G  +EA K+  K++
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK 362


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 220/436 (50%), Gaps = 4/436 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ ++L  A A++   ++LG  PD+VT + L++ YC          ++++M  
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P+ VT+N+LI G   ++  S ++ L+D M+  G  PD+++Y ++++ L + G  D 
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M  G +      +  +++ LC  +  ++AL +F  +   G  P +VTYN LI+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T++ ++    +  K     ++   M ++    
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL EA    E M++     ++V+YNTLI  +CK  ++E    L 
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+  LI GL +AG+   A+   + M   G   ++  Y+ ++D L K 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++      D +TY+ M+  +CKA ++     L  S    GV+      
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538

Query: 427 KAVVDGLRHSGCRREA 442
             ++ G    G + EA
Sbjct: 539 TTMISGFCRKGLKEEA 554



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 196/382 (51%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A+I   +  G  PD+ TY  +++  C+    D   ++L +M +  I  DVV Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
            ++I        ++ +L+L  EM   GI P+V +YNSL+ CL   G+  +A+R+  DMI 
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TF+ +++   K      A +++  + K    P++ TY+ LI G C   RL  
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ + + +      PN +TY T++K   + ++ + G+E+   M ++G   +   Y T+I 
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              + G    A    ++MV+DGV  DI++Y+ L++  CK GKLE A ++ + ++K   E 
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D YT+ I+I+G+CKAG ++        ++  G   N+  Y  ++    + G  + A  +F
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 381 ESMEVKDSFTYSSMVHNLCKAK 402
             M+   +   S   + L +A+
Sbjct: 559 REMKEDGTLPNSGTYNTLIRAR 580



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 191/401 (47%), Gaps = 5/401 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++ A +++    +  +  DVV Y  +IDA C + + +    +   M   GI P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI         S +  LL +M+E  I P+V ++++L+    + GK  EA +++ 
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   + P   T++ ++NG C +   D A  MF  +      P +VTYN LIKG CKA 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+     +  +I   M   G   D   Y 
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G+L++A    E +    ++ DI +YN +I   CK GK+E  + L   +  +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +   +T +I G C+ G  + A      M + G   N   YN ++    +DG    +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             + + M     V D+ T  SMV N+    RL  +   +LS
Sbjct: 590 AELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSYLEMLS 629



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 200/416 (48%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L+ A  +  + ++   LP +V +N L+ A  +   FD   ++  RM+   IS D+ +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI    R S L  +L +L +M+++G  PD+ + +SL++      +  EA  +   M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           +  P T TFN +++GL  +     A+ +   +   G  P+L TY  ++ GLCK G +  A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +LK++       + + YTTI+      +     L + + M  KG   +   Y ++I  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V+++ LI+ + KEGKL  A  L DEM K+  + D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T++ LI+G C    +  A+   E M       N+  YN ++    K  +++  + +F 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            M     V ++ TY++++  L +A     A K+    +  GV         ++DGL
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 185/411 (45%), Gaps = 9/411 (2%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           ++ N+L+D     +  D    +   M ++   P +V +N L++   + +     + L + 
Sbjct: 51  LSRNVLLD-----LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M  + I  D++SYN L++C  +  +   A  V   M+     P   T + +LNG C  + 
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+ +   +    + P  VT+N LI GL    +   A  ++  +   G  P+  TY T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +     L L +L  M++     D   Y T+I A      + +A +   +M   G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ ++V+YN+LI   C  G+   A  LL +M ++    +  T + LID   K G +  A 
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 398
              + M K   D ++  Y+ +++      ++D A ++FE M  KD F    TY++++   
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           CKAKR+    +L     + G+         ++ GL  +G    A+KI  K+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 115/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+E+   +  +  + G++ + VTYN LI    Q    D    I  +M  
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G  +   L  +L + + + +  + PD+++YN ++  + + GK ++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P    +  M++G C+    + A  +FR +++ G +P   TYN LI+
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G   +A T + ++      R  K  LE+LS
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +    +A   + A+ I    +  GV PD++TY++L+D  C++   +    + 
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             ++++ + PD+ TYN +I G  +   +    DL   +   G+ P+V  Y +++    + 
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  +EA+ +F++M      P + T+N ++    ++     +  + + ++  GFV +  T 
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608

Query: 186 NILIKGLCKAGRLRTA 201
           +++I  L   GRL  +
Sbjct: 609 SMVINML-HDGRLEKS 623


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 210/418 (50%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T N+LI+ +C        +T+L ++ + G  P+ +T N+L+ G      +  S
Sbjct: 40  GIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKS 99

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   D  SY +L++ L ++G+   A ++ + +      P    +N +++G
Sbjct: 100 LHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDG 159

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++  + A  ++  +   G  P ++TY+ LI G C AG+L  A  +L E+      PN
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TYT +M    +  K K    +L+ M ++G   +   Y T++  +  IG ++ A     
Sbjct: 220 VYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFH 279

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV  GV  ++ SYN +I+  CK  +++ A  LL E+  +    +  T++ LIDG CK G
Sbjct: 280 TMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLG 339

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   L+ M   G  +++  Y  ++D L K+  +D A  +F  M+ +    + +TY+
Sbjct: 340 RITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYT 399

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++  LCK  R  +A KL    L  G RI       ++ GL   G   EA  ++SK+ 
Sbjct: 400 ALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 209/410 (50%), Gaps = 4/410 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T  LN  +   C    ++K+       +  G   D V+Y  L++  C+     +   +L
Sbjct: 79  NTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLL 138

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             + +    P+VV YN++I G  ++ L++ + DL  EM   GI P+V +Y++L++     
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLA 198

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  EA  +  +MI  ++ P   T+ I+++ LCK      A  +   + K G  P +V+Y
Sbjct: 199 GQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSY 258

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N L+ G C  G ++ A+ +   +   G  PN  +Y  ++    ++++    + +L  +  
Sbjct: 259 NTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH 318

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K    +   Y ++I  F K+GR+  A D +++M   G   D+V+Y +L++  CK   L+ 
Sbjct: 319 KNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L  +M+++G + +KYT+T LIDGLCK G  K A+   +++   G   N+  YN ++ 
Sbjct: 379 ATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMIS 438

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            L K+G +D A+ +   ME    + D+ T+  ++ +L +  +   A KLL
Sbjct: 439 GLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLL 488



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 207/410 (50%), Gaps = 4/410 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P ++ +N ++ +  +   +    ++  +M+  GI PD+ T N LI        ++ S  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  P+  + N+LM  L   G+  ++      ++         ++  +LNGLCK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T +AL++ R ++     P +V YN +I GLCK   +  A  +  E+   G  PN IT
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++       +      +L+ M  K    + + Y  ++ A  K G++KEA + +  M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +GV+ ++VSYNTL++ YC  G+++ A  +   M ++G   + Y++ I+ID LCK+  + 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A   L  +       N   Y+ ++D   K G+I  A+++ + M    +  D  TY+S++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             LCK + L  A+ L +   + G++  K    A++DGL   G  + A+K+
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 172/342 (50%), Gaps = 4/342 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P ++ +N ++    +      ++ L  +M   GI PD+++ N L++C   LG+   +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   ++     P T T N ++ GLC       +L     +   GF  + V+Y  L+ GLC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G  R+A  +L+ + D    PN + Y TI+    +++      ++ S M  +G   +  
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  F   G+L EA   + +M+   +  ++ +Y  L++  CKEGK++ A  LL  M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K+G + +  ++  L+DG C  G ++ A+     M + G + N+ +YN ++DRL K  ++
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 374 DHAIN----VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           D A+N    V     V ++ TYSS++   CK  R+ SA  LL
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 181/380 (47%), Gaps = 1/380 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV YN +ID  C+    +  Y + + M   GI P+V+TY++LI G      L  +  L
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM+   I P+V++Y  LM  L + GK  EA  +   M    + P   ++N +++G C 
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL 267

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                NA +MF  + + G  P + +YNI+I  LCK+ R+  A  +L+E+      PN +T
Sbjct: 268 IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVT 327

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y++++    +  +    L++L  M  +G   D   Y +++ A  K   L +AT    +M 
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+Q +  +Y  LI+  CK G+ + A  L   +  +G   + +T+ ++I GLCK G + 
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 399
            A      M + G   +   +  I+  L +  + D A  +   M  KD   +    H   
Sbjct: 448 EALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDF-HGER 506

Query: 400 KAKRLPSASKLLLSCLKSGV 419
                  A KLL   +  G+
Sbjct: 507 SPNENDKAEKLLHEMIAKGL 526



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 39/329 (11%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           TP    FN ++  L K ++   A+ +F+ +Q  G  P+L T NILI   C  G++  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +L ++   G+ PN IT  T+MK      + K  L     +  +G+  D   Y T++    
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 264 KIGRLK-----------------------------------EATDYMEQMVTDGVQLDIV 288
           KIG  +                                   EA D   +M   G+  +++
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y+TLI  +C  G+L  A+ LL+EM  +    + YT+TIL+D LCK G +K A+  L  M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
            K G   N+ +YN ++D     G++ +A  +F +M  K    + ++Y+ M+  LCK+KR+
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             A  LL   L   +        +++DG 
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGF 335



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 161/335 (48%), Gaps = 36/335 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC A +L +A  ++ + I   + P+V TY +L+DA C+         +L  M + G+ P+
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPN 254

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN+L+ G      +  +  +   M++ G+ P+V+SYN ++  L +  + DEA  + +
Sbjct: 255 VVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLR 314

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +++  ++ P T T++ +++G CK     +AL + + +   G   ++VTY  L+  LCK  
Sbjct: 315 EVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQ 374

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  +  ++ + G  PN  TYT ++                             G C
Sbjct: 375 NLDKATALFMKMKERGIQPNKYTYTALID----------------------------GLC 406

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                  K GR K A    + ++  G ++++ +YN +I+  CKEG L+ A  +  +ME+ 
Sbjct: 407 -------KGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEEN 459

Query: 317 GFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNK 350
           G   D  T  I+I  L  K  N K  +L  E + K
Sbjct: 460 GCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 138/279 (49%), Gaps = 4/279 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   CK  ++++A+ ++    + GV P+VV+YN L+D YC          + + M + 
Sbjct: 225 ILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G++P+V +YN +I    ++  +  +++LL E+L   + P+  +Y+SL+    +LG+   A
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSA 344

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + ++M          T+  +L+ LCKN+  D A  +F  +++ G  P   TY  LI G
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LCK GR + A+ + + L   G   N  TY  ++    +       L + S M+  G   D
Sbjct: 405 LCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
              +  +I +  +    K+  D  E+++ + +  D++ +
Sbjct: 465 AVTFEIIIRSLFE----KDQNDKAEKLLHEMIAKDLLRF 499


>gi|224137392|ref|XP_002322546.1| predicted protein [Populus trichocarpa]
 gi|222867176|gb|EEF04307.1| predicted protein [Populus trichocarpa]
          Length = 264

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/229 (45%), Positives = 138/229 (60%), Gaps = 21/229 (9%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + STR  NIC+ + CKA  L++AE +IIDG  LGVLPDVVTY+ LI+AY +FVSF+A
Sbjct: 1   MVSRSSTRFSNICIASICKARHLKRAEIVIIDGTILGVLPDVVTYDTLINAYSRFVSFEA 60

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y++L+RM+EA I+PDV T NSLIAGA R+ LLS  +DL +EMLE  I  DVWSYN+LM 
Sbjct: 61  AYSVLDRMKEACINPDVFTCNSLIAGAMRHCLLSKCMDLFEEMLEWRIKADVWSYNTLMR 120

Query: 121 CLFQLGKPDEANRVFQDMICG-----------------DLTPCTATFNIMLNGLCKNRYT 163
           C F+LGKPDE NR    ++ G                          N M++G CK  + 
Sbjct: 121 CFFKLGKPDEMNRTHTTLMNGLCEEGDVYGAMEYMNVVGFNSNLVALNTMVDGWCKADWI 180

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           D AL++F  +       +  +++ LI  LCK GR R A  +L     SG
Sbjct: 181 DCALKIFDSMDTR----DSFSHSSLIHNLCKDGRFRCASKLLLSCVRSG 225



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 159/267 (59%), Gaps = 18/267 (6%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NI I  +CKA  L+ A  ++ +    G  P+ +TY T++    R   ++    +L  MK 
Sbjct: 11  NICIASICKARHLKRAEIVIIDGTILGVLPDVVTYDTLINAYSRFVSFEAAYSVLDRMKE 70

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                D F   ++IA  ++   L +  D  E+M+   ++ D+ SYNTL+  + K GK   
Sbjct: 71  ACINPDVFTCNSLIAGAMRHCLLSKCMDLFEEMLEWRIKADVWSYNTLMRCFFKLGKP-- 128

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
                DEM +        THT L++GLC+ G++ GA   +EYMN +GF+SNL A N +VD
Sbjct: 129 -----DEMNR--------THTTLMNGLCEEGDVYGA---MEYMNVVGFNSNLVALNTMVD 172

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
              K   ID A+ +F+SM+ +DSF++SS++HNLCK  R   ASKLLLSC++SG+ IL S 
Sbjct: 173 GWCKADWIDCALKIFDSMDTRDSFSHSSLIHNLCKDGRFRCASKLLLSCVRSGMSILPST 232

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMA 452
           + AV D L  SGC+REAK+++S+I++A
Sbjct: 233 KHAVFDSLSRSGCQREAKRLKSEIKLA 259



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 22/227 (9%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T++ ++N   +    + A  +   +++    P++ T N LI G  +   L     +
Sbjct: 40  PDVVTYDTLINAYSRFVSFEAAYSVLDRMKEACINPDVFTCNSLIAGAMRHCLLSKCMDL 99

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            +E+ +     +  +Y T+M+C F     KLG      M R         + T++    +
Sbjct: 100 FEEMLEWRIKADVWSYNTLMRCFF-----KLGKP--DEMNRT--------HTTLMNGLCE 144

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G +  A +YM  +   G   ++V+ NT+++ +CK   ++ A  + D M+ +    D ++
Sbjct: 145 EGDVYGAMEYMNVV---GFNSNLVALNTMVDGWCKADWIDCALKIFDSMDTR----DSFS 197

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           H+ LI  LCK G  + A   L    + G        + + D L + G
Sbjct: 198 HSSLIHNLCKDGRFRCASKLLLSCVRSGMSILPSTKHAVFDSLSRSG 244


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 205/415 (49%), Gaps = 9/415 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  +  + +  F +   +E+A  +     ++ VLP +   NM++D   +   FD  + 
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALWVYY---KMDVLPAMQACNMVLDGLVKKGRFDTMWK 179

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   G SP+VVTY +LI G  R      +  L DEM+E  I P V  Y  L+  L 
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLC 239

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              +  EA  +F+ M    + P   T+N M++G CK  +   AL ++  +   G +P +V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVV 299

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+ ILI GLCK   + +AR  L ++   G  PN   Y  ++    +       L + S +
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D F Y  +I     + R++EA   +++M   G   + V+YNTLI+ YCKEG +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNC 362
           E A  +  +M ++G E +  T + LIDG CKAG ++ A  L+ E + K G   ++ AY  
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTA 478

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           ++D   KDG    A  + + M+      + FT S ++  LCK  R+  A KL L+
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 202/421 (47%), Gaps = 54/421 (12%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+     KA  +  + I   + P VV Y +LI   C         ++   MR +G+ P++
Sbjct: 204 CRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNL 263

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            TYN+++ G  + + +  +L+L  EML  G+ P+V ++  L+  L +  +   A +   D
Sbjct: 264 YTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID 323

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    + P    +N +++G CK      AL +   ++KH  +P++ TY+ILIKGLC   R
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +L+E+   G  PNA+TY T++                             GYC 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLID----------------------------GYC- 414

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
                 K G +++A +   QM   G++ +I++++TLI+ YCK GK+EAA  L  EM  +G
Sbjct: 415 ------KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 318 FECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
              D   +T LIDG  K GN K A RLH E M + G   N+   +C++D L KDG+I  A
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKE-MQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 377 INVF-----------------ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I +F                  S+   +   Y++++  LC   R+  ASK       SG+
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 420 R 420
           R
Sbjct: 588 R 588



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 191/395 (48%), Gaps = 9/395 (2%)

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           + +L+R+  +  +P+V  +  LI   +   L+  +L +     +M + P + + N ++  
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVY---YKMDVLPAMQACNMVLDG 167

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L + G+ D   +V+ DM+    +P   T+  +++G C+      A R+F  + +    P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +V Y ILI+GLC   R+  A  + + + +SG  PN  TY T+M    +    K  LE+  
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYX 287

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   +   +  +I    K   +  A  ++  M + GV  +I  YN LI+ YCK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L  A  L  E+EK     D +T++ILI GLC    ++ A   L+ M K GF  N   YN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D   K+G ++ AI V   M  K    +  T+S+++   CKA ++ +A  L    +  
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           G+     A  A++DG    G  +EA ++  +++ A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD+VT  + + A     + D G  I   +R  G+  D+   NSLI   ++   +  +  L
Sbjct: 747 PDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRL 806

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----------------L 143
            D   +  +    W+   + H L   G+ +EA ++F +M   +                +
Sbjct: 807 FDGTQKKDV--TTWTSMIVGHALH--GQAEEALQLFTEMKETNKRARKNKRNGEXESSLV 862

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTA- 201
            P   TF  +L         +   + FR +++ +   P +  +  ++  LC+AG L  A 
Sbjct: 863 LPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAY 922

Query: 202 RWILKELGDSGHAPNAITYTTIMKCC 227
            +ILK        PNA+ + T++  C
Sbjct: 923 EFILK----MPVRPNAVVWRTLLGAC 944


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 216/473 (45%), Gaps = 40/473 (8%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVT 79
           R +   ++  + ++LG+ P +VTYN L+D++ +    D    +L  M  R  G  P  VT
Sbjct: 211 RWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVT 270

Query: 80  YNSLIAGATRNSLLSCSLDLLDEM-------------------------------LEM-- 106
           YN +I G  R   L  +  L+D M                               LEM  
Sbjct: 271 YNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMEN 330

Query: 107 -GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            GI P V +YN+++H +F+ G  + A   F +M    L P   T+N ++NG CK      
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKE 390

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           AL +F  L++ G  P ++TYNIL+ G C+ G L  AR   +E+ + G  P+  TYT +M 
Sbjct: 391 ALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMN 450

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              + R   +  E    M  KG   D F Y T I+A + +G   EA    E M++ G+  
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D V+YN  ++  CK G L+ AY+L  +M   G + D  T+T LI   C+ G ++ AR   
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
           + M   G   +   Y   +    + G +  A   F+ M  +    +  TY+ ++H LC+ 
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            R   A +     L+ G+   K     ++DG    G   EA ++ S++    I
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI 683



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 187/374 (50%), Gaps = 38/374 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA  L++A  +  D  R G+ P V+TYN+L+D YC+    +        M E
Sbjct: 376 NSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE 435

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDV TY  L+ G+ +   L+   +  DEML  G+ PD ++YN+ +     LG   E
Sbjct: 436 QGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSE 495

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + MI   ++  T T+NI L+GLCK+    +A  ++  +   G  P+ +TY  LI 
Sbjct: 496 AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIH 555

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ GRLR AR I   +  SG  P+A+TYT                             
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVF--------------------------- 588

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                   I A+ + G L  A  + ++M+ +GV+ + V+YN LI+  C+ G+   AY   
Sbjct: 589 --------IHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHF 640

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            EM ++G   +KYT+T+LIDG CK GN + A RL+ E M++ G   +   +N +      
Sbjct: 641 HEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE-MHQHGIHPDHCTHNALFKGF-D 698

Query: 370 DGKIDHAINVFESM 383
           +G+  HAI   E++
Sbjct: 699 EGQSKHAIQYMENV 712



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 191/427 (44%), Gaps = 5/427 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +   LEKA A ++D +R+       T+N LI  Y    S +    +   M  
Sbjct: 272 NVVINGLARKGELEKA-AQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMEN 330

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P VVTYN++I G  R+  +  +     EM  MG+ PD+ +YNSL++   + G   E
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKE 390

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F D+    L P   T+NI+L+G C+    + A R  + + + G  P++ TY IL+ 
Sbjct: 391 ALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMN 450

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K   L   R    E+   G  P+   Y T +             ++   M  +G + 
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y   +    K G LK+A     +MV+DG+Q D ++Y  LI+ +C+ G+L  A  + 
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M   G      T+T+ I   C+ GN+  A    + M + G   N   YN ++  L + 
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ + A   F  M  +    + +TY+ ++   CK      A +L     + G+       
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTH 690

Query: 427 KAVVDGL 433
            A+  G 
Sbjct: 691 NALFKGF 697



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 196/443 (44%), Gaps = 44/443 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P +   N+++ A      +D   ++   M + GI P +VTYN+L+    R   +  +
Sbjct: 191 GVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQA 250

Query: 97  LDLLDEMLEMG---IPPDV---------------------------------WSYNSLMH 120
             LL EM       +P DV                                 +++N L+ 
Sbjct: 251 AKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLIT 310

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
             F  G  ++A  +  +M    + P   T+N +++G+ ++   + A   F  ++  G +P
Sbjct: 311 GYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLP 370

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +L+TYN LI G CKAG L+ A W+  +L  +G AP+ +TY  ++    R    +      
Sbjct: 371 DLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFK 430

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G   D   Y  ++    K+  L    ++ ++M++ G+Q D  +YNT I+     
Sbjct: 431 QEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELIL 490

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G    A+ L + M  +G   D  T+ I +DGLCK+GN+K A +    M   G   +   Y
Sbjct: 491 GSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITY 550

Query: 361 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
            C++    + G++  A ++F+ M V      + TY+  +H  C+   L SA       L+
Sbjct: 551 TCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLE 610

Query: 417 SGVRILKSAQKAVVDGLRHSGCR 439
            GVR      +   + L H+ CR
Sbjct: 611 EGVR----PNEVTYNVLIHALCR 629



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 7/293 (2%)

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F++M    + P     N++L  L      D+   ++  + + G  P +VTYN L+    
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242

Query: 194 KAGRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           + GR+  A  +L+E+     G  P+ +TY  ++    R  + +   +++  M R      
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKAS 301

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F +  +I  +   G +++A     +M  +G+   +V+YNT+I+   + G +EAA +   
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G   D  T+  LI+G CKAGN+K A      + + G   ++  YN ++D   + G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            ++ A    + M  +    D  TY+ +++   K + L    +     L  G++
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ 474



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 7/274 (2%)

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L  FR +  HG  P +   N++++ L    R    R +  E+   G  P+ +TY T++  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 227 CFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            FR  +     ++L  M+ +  G       Y  VI    + G L++A   +++M     +
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-K 299

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
               ++N LI  Y   G +E A  L  EME +G      T+  +I G+ ++GN++ AR+ 
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
              M  +G   +L  YN +++   K G +  A+ +F  ++         TY+ ++   C+
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
              L  A +     ++ G +   S    +++G R
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 217/481 (45%), Gaps = 41/481 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI V   CK  ++EK    +      GV PD+VTYN LI AY      +  + ++N M 
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G SP V TYN++I G  ++     + ++  EML  G+ PD  +Y SL+    + G   
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  +VF DM   D+ P    F+ M++   ++   D AL  F  +++ G +P+ V Y ILI
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY---------------- 233
           +G C+ G +  A  +  E+   G A + +TY TI+    + +                  
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477

Query: 234 --------------KLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                         KLG     +E+   MK K    D   Y T++  F K+G +  A + 
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              MV+  +    +SY+ L+N  C +G L  A+ + DEM  +  +        +I G C+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDS 388
           +GN       LE M   GF  +  +YN ++    ++  +  A  + + ME      V D 
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           FTY+S++H  C+  ++  A  +L   ++ GV   +S    +++G        EA +I  +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717

Query: 449 I 449
           +
Sbjct: 718 M 718



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 202/445 (45%), Gaps = 4/445 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + ++ + T+ +A +L +A          G    +   N LI +  +    +  + +   +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             +G+  +V T N ++    ++  +      L ++ E G+ PD+ +YN+L+      G  
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  +   M     +P   T+N ++NGLCK+   + A  +F  + + G  P+  TY  L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +   CK G +     +  ++      P+ + ++++M    R+      L   +++K  G 
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  + + G +  A +   +M+  G  +D+V+YNT+++  CK   L  A  
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L +EM ++    D YT TILIDG CK GN++ A    + M +     ++  YN ++D  G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526

Query: 369 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K G ID A  ++  M  K+      +YS +V+ LC    L  A ++    +   ++    
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKI 449
              +++ G   SG   + +    K+
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKM 611



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 188/378 (49%), Gaps = 41/378 (10%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK   + + E +  D     V+PD+V ++ ++  + +  + D      N ++EAG+ PD 
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y  LI G  R  ++S +++L +EML+ G   DV +YN+++H L +     EA+++F +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    L P + T  I+++G CK     NA+ +F+ +++     ++VTYN L+ G  K G 
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 198 LRTARWILKELGDSGHAPNAITYT-----------------------------TIMKC-- 226
           + TA+ I  ++      P  I+Y+                             T+M C  
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 227 -----CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                C R+     G   L  M  +G+  D   Y T+I  FV+   + +A   +++M  +
Sbjct: 591 MIKGYC-RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649

Query: 282 --GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+  D+ +YN++++ +C++ +++ A ++L +M ++G   D+ T+T +I+G     N+ 
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709

Query: 340 GA-RLHLEYMNKIGFDSN 356
            A R+H E + + GF  +
Sbjct: 710 EAFRIHDEMLQR-GFSPD 726



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 37/342 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F ++  L+KA          G++PD V Y +LI  YC+         + N M + G + D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD------------------------- 111
           VVTYN+++ G  +  +L  +  L +EM E  + PD                         
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 112 ----------VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                     V +YN+L+    ++G  D A  ++ DM+  ++ P   +++I++N LC   
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
           +   A R++  +      P ++  N +IKG C++G        L+++   G  P+ I+Y 
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           T++    R         ++  M+ +  G   D F Y +++  F +  ++KEA   + +M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             GV  D  +Y  +IN +  +  L  A+ + DEM ++GF  D
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 8/298 (2%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           + F++++    + R    A   F  L+  GF   +   N LI  L + G +  A  + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  SG   N  T   ++    ++ K +     LS ++ KG   D   Y T+I+A+   G 
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           ++EA + M  M   G    + +YNT+IN  CK GK E A  +  EM + G   D  T+  
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           L+   CK G++         M       +L  ++ ++    + G +D A+  F S++   
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
            + D+  Y+ ++   C+   +  A  L    L+ G  +       ++ GL    C+R+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL----CKRK 459



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + + + V T       F K   ++ A+ I  D +   +LP  ++Y++L++A C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                   + + + M    I P V+  NS+I G  R+   S     L++M+  G  PD  
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           SYN+L++   +     +A  + + M    G L P   T+N +L+G C+      A  + R
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            + + G  P+  TY  +I G      L  A  I  E+   G +P+
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 4/200 (2%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   +  +++   + RK +   E  + ++ KG+T        +I + V+IG ++ A    
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           +++   GV +++ + N ++N  CK+GK+E     L +++++G   D  T+  LI      
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
           G ++ A   +  M   GF   +  YN +++ L K GK + A  VF  M       DS TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 392 SSMVHNLCKAKRLPSASKLL 411
            S++   CK   +    K+ 
Sbjct: 344 RSLLMEACKKGDVVETEKVF 363


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 181/365 (49%), Gaps = 3/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            NI +   CK  +L KA  II D    GV  +V+TYN LID YC+       Y    IL 
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  GI P+ VT+N LI G  ++  +S ++ +  EM   G+ P+V +YNSL++ L   G
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EA  +   M+   L P   T N +LNG CKN+    A  +F  + K G  P + TYN
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI   CK   +  A  + + +   G  P+  TY  ++    R    +    ++S M  K
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D   Y  +I +    G +K+A   +++M   G++   ++YNT+I+ YCKEG L AA
Sbjct: 406 HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  +MEK G   +  T+ +LI G CK   ++ A   L  M + G   N   Y  + + 
Sbjct: 466 LNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEE 525

Query: 367 LGKDG 371
           + + G
Sbjct: 526 MMEKG 530



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 176/331 (53%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           C   K  ++ KA+AI+ +    G+ P+ VT+N+LID +C+  +  A   +   M   G+ 
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+VVTYNSLI G   N  ++ +  L D+M+   + P++ ++N+L++   +     +A  +
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F DM    +TP   T+NI+++  CK+   ++A  ++R +   G  P++ TYN LI GLC+
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G L  AR ++ E+       + ITY  ++       + K  L +L  M RKG       
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLT 448

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I  + K G L+ A +   QM   G   ++ +YN LI  +CK+ KLE A  LL+EM 
Sbjct: 449 YNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEML 508

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           ++G   ++ T+ I+ + + + G +     HL
Sbjct: 509 EKGLIPNRMTYEIVTEEMMEKGFVPDIEGHL 539



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 207/420 (49%), Gaps = 36/420 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS    N  +    K   +   E +  + IR  + P ++++N++I+  C+    +    
Sbjct: 125 KLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGD 184

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I+  M+  G+S +V+TYN+                L+D   +MG                
Sbjct: 185 IIEDMKVRGVSANVITYNT----------------LIDGYCKMG---------------- 212

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++GK  +A+ + ++M    + P   TFNI+++G CK++    A+++F  + + G  P +V
Sbjct: 213 KIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI GLC  G++  A  +  ++ +S   PN IT+  ++    +N+  K   E+   M
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            ++G T +   Y  +I A+ K   +++A      M+  GV  D+ +YN LI   C++G L
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           EAA  L+ EM+ +  + D  T+ ILID LC  G +K A   L+ M + G   +   YN +
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K+G +  A+N+   ME    + +  TY+ ++   CK  +L  A+ LL   L+ G+
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 185/362 (51%), Gaps = 11/362 (3%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G+   V S N LM  L ++G+  +   V+++MI   + P   +FNI++NGLCK    +
Sbjct: 121 DYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLN 180

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKA---GRLRTARWILKELGDSGHAPNAITYT 221
            A  +   ++  G    ++TYN LI G CK    G++  A  ILKE+   G  PN +T+ 
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFN 240

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +++     +++ + M R+G   +   Y ++I      G++ EAT   +QMV  
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS 300

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            ++ +I+++N L+N +CK   ++ A  L D+M KQG   +  T+ ILID  CK  N++ A
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDA 360

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
                 M   G   ++  YNC++  L + G ++ A N+   M+ K    D  TY+ ++ +
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDS 420

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI----RMAK 453
           LC    +  A +LL    + G++  +     ++DG    G  R A  ++S++    R+A 
Sbjct: 421 LCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLAN 480

Query: 454 IS 455
           ++
Sbjct: 481 VA 482



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 12/222 (5%)

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
           GDS  A N+I    ++    +N + +LG E        G          +++  VK+G +
Sbjct: 86  GDSFCA-NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEI 144

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +     ++M+   ++  ++S+N +IN  CK GKL  A  ++++M+ +G   +  T+  L
Sbjct: 145 GDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTL 204

Query: 329 IDGLCKAGNIK---GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
           IDG CK G I     A   L+ M   G   N   +N ++D   KD  +  A+ VF  M  
Sbjct: 205 IDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR 264

Query: 386 K----DSFTYSSMVHNLCKAKRLPSAS----KLLLSCLKSGV 419
           +    +  TY+S+++ LC   ++  A+    +++ SCLK  +
Sbjct: 265 QGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI 306



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 16/112 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +  +CK   L  A  +     ++G L +V TYN+LI  +C+    +    
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           +LN M E G+ P+ +TY  +                 +EM+E G  PD+  +
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVT----------------EEMMEKGFVPDIEGH 538


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 219/447 (48%), Gaps = 6/447 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +   CKA  +++AE +    I  GV PD VTYN +ID  C+  + D    
Sbjct: 292 KPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEG 351

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M + G+ PD +TY  +I G  +   +  +  +  +M++ G+ P+  +YN L+H   
Sbjct: 352 VFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYL 411

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+ +E  +  ++M   DL P   T+ ++L+ LCKN   + A  +F  + + G  P + 
Sbjct: 412 STGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVT 471

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY-KLGLEILSA 242
            Y I++ G  K G L     +L  +  +G +PN   + T++ C +  R      + I   
Sbjct: 472 IYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI-CAYAKRAMIDEVMHIFIK 530

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK++G + +   Y T+I A  K+GR+ +A     QM+ +GV  + V +N+L+   C   K
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            E    L  EM  QG   D      ++  LCK G +  AR  ++ M  +G   ++ +YN 
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++D      ++D A+ + + M       +  +Y++++H  CKA R+ +A  L    L+ G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKI 445
           V         +++GL  SG   EA+++
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEAREL 737



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 10/424 (2%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            C   R E+A  ++   +DG      PDVV+YN++I+ +      D  Y++     E G+
Sbjct: 165 LCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF---LEMGV 221

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVVTYN++I G  +   +  + D+  +M+E G+ P+  +YN+++  L +  + D A  
Sbjct: 222 SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEG 281

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VFQ M+   + P   T+N +++GLCK +  D A  +F+ +   G  P+ VTYN +I GLC
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KA  +  A  + +++ D G  P+ +TYT I+    + +       +   M  KG   +  
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I  ++  G+ +E    +++M    ++ D+ +Y  L++  CK GK   A  L D M
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G +     + I++ G  K G +      L  M   G   N   +N ++    K   I
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D  +++F  M+ +    +  TY +++  LCK  R+  A       +  GV        ++
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581

Query: 430 VDGL 433
           V GL
Sbjct: 582 VYGL 585



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 7/414 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  F    +++KA ++ ++   +GV PDVVTYN +ID  C+    D    +  +M E
Sbjct: 197 NIVINGFFNEGQVDKAYSLFLE---MGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVE 253

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VTYN++I G  +   +  +  +  +M++ G+ P   +YN+++  L +    D 
Sbjct: 254 KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDR 313

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VFQ MI   + P   T+N +++GLCK +  D A  +F+ +   G  P+ +TY I+I 
Sbjct: 314 AEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIID 373

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA  +  A  + +++ D G  PN  TY  ++       +++  ++ +  M       
Sbjct: 374 GLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEP 433

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  ++    K G+  EA    + M+  G++  +  Y  +++ Y K+G L   + LL
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M   G   +      +I    K   I         M + G   N+  Y  ++D L K 
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           G++D A+  F  M       ++  ++S+V+ LC   +     +L L  L  G+R
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 217/478 (45%), Gaps = 39/478 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KAE +    I  GV PD +TY ++ID  C+  S D    +  +M +
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TYN LI G          +  + EM    + PDV++Y  L+  L + GK +E
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG--------------------------------LC 158
           A  +F  MI   + P    + IML+G                                +C
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 159 ---KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              K    D  + +F  +++ G  P +VTY  LI  LCK GR+  A     ++ + G  P
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + + +++       K++   E+   M  +G   D   + TV+    K GR+ EA   +
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLI 633

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G++ D++SYNTLI+ +C   +++ A  LLD M   G + +  ++  L+ G CKA
Sbjct: 634 DSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKA 693

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTY 391
           G I  A      M + G    +E YN I++ L + G+   A    +N+ +S ++    TY
Sbjct: 694 GRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTY 753

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           S ++   CK      A K+  S     +++       ++DGL   G + +A  + + I
Sbjct: 754 SIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAI 811



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 178/369 (48%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+ N  +C + K   +++   I I   + G+ P+VVTY  LIDA C+    D      N+
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++P+ V +NSL+ G           +L  EML  GI PD+  +N+++  L + G+
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA R+   M+C  L P   ++N +++G C     D A+++  G+   G  P +V+YN 
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G CKAGR+  A  + +E+   G  P   TY TI+   FR+ ++    E+   M +  
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
             +    Y  ++  F K     EA    + + +  +QLDI+++N +I+   K G+ E A 
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G      T+ ++ + L + G+++        M K G   N    N ++ +L
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKL 865

Query: 368 GKDGKIDHA 376
              G+I  A
Sbjct: 866 LDRGEIPRA 874



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 188/391 (48%), Gaps = 11/391 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PD  TY+++I  +C+    + G+     + + G   D +  N L+ G      +  ++
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139

Query: 98  D-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT---ATFNIM 153
             LL +M E+G    V SYN+L+  L    + +EA  +   M+ G  + C+    ++NI+
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NG       D A  +F  +   G  P++VTYN +I GLCKA  +  A  + +++ + G 
Sbjct: 200 INGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY TI+    + ++  +   +   M  KG       Y T+I    K   +  A  
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             +QM+  GV+ D V+YNT+I+  CK   ++ A  +  +M  +G + D  T+TI+IDGLC
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 389
           KA ++  A    + M   G   N   YNC++      G+ +  +   + M       D F
Sbjct: 377 KAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVF 436

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           TY  ++  LCK  +   A  L  S ++ G++
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIK 467



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 213/442 (48%), Gaps = 20/442 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF-DAGYTILNRMR 69
           +I +  FC+  RLE   A     ++ G   D +  N L+   C      +A + +L +M 
Sbjct: 88  SIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMP 147

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML---EMGIPPDVWSYNSLMHCLFQLG 126
           E G    VV+YN+L+ G         + +LL  M+   +    PDV SYN +++  F  G
Sbjct: 148 EVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEG 207

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D+A  +F +M    ++P   T+N +++GLCK +  D A  +F+ + + G  P  VTYN
Sbjct: 208 QVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYN 264

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I GLCKA  +  A  + +++ D G  P+ +TY TI+    + +       +   M  +
Sbjct: 265 TIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR 324

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y T+I    K   + +A    +QM+  GV+ D ++Y  +I+  CK   ++ A
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +  +M  +G + +  T+  LI G    G  +     ++ M+    + ++  Y  ++D 
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444

Query: 367 LGKDGKIDHAINVFESM---EVKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGV--- 419
           L K+GK + A ++F+SM    +K S T Y  M+H   K   L     LL   + +G+   
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 420 -RILKS-----AQKAVVDGLRH 435
            RI  +     A++A++D + H
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMH 526



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 149/292 (51%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  +C  CK  R+ +A  +I   + +G+ PDV++YN LID +C     D    +L+ M
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             AG+ P++V+YN+L+ G  +   +  +  L  EML  G+ P V +YN++++ LF+ G+ 
Sbjct: 672 VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRF 731

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  ++ +MI         T++I+L+G CKN   D A ++F+ L       +++T+NI+
Sbjct: 732 SEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIM 791

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GL K GR   A  +   +  +G  P+ +TY  I +        +    + S M++ G 
Sbjct: 792 IDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGT 851

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             +      +I   +  G +  A  Y+ ++      L+  + + LI+L+ +E
Sbjct: 852 APNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 25/294 (8%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKA-----GRLRTARW--ILKELGDSGHAPNA 217
           +AL++F  L  H     +   N L+  + +A      +L  +R+  +L++  +   AP+ 
Sbjct: 26  DALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNK-VAPDC 84

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-E 276
            TY+ ++ C  R  + +LG      + + G+  D      ++       R+ EA   +  
Sbjct: 85  CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLR 144

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFEC--DKYTHTILIDGLC 333
           QM   G +L +VSYNTL+   C   + E A  LL  M + Q   C  D  ++ I+I+G  
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204

Query: 334 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
             G + K   L LE    +G   ++  YN I+D L K  ++D A +VF+ M  K    ++
Sbjct: 205 NEGQVDKAYSLFLE----MGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            TY++++  LCKA+ +  A  +    +  GV+        ++DGL    C+ +A
Sbjct: 261 VTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL----CKAQA 310


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 199/401 (49%), Gaps = 4/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++    R G   DV  YN L+  YC++   DA   ++  M    ++PD
Sbjct: 119 LCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPD 175

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  +I G      +  +L LLD+ML  G  P V +Y  L+  + +     +A  V  
Sbjct: 176 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 235

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A      L  +GF P+ V+Y  ++KGLC A 
Sbjct: 236 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R      +  E+ +    PN +T+  +++   R    +  +++L  M   G   +     
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 355

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI    K GR+ +A  ++  M + G   D +SY T++   C+  + E A  LL EM ++
Sbjct: 356 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I+ A + +E M++ G + N+  YN +V+     G++D A
Sbjct: 416 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 475

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + +F SM  K ++ TY++++  LC A+RL +A++LL   L+
Sbjct: 476 LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516



 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 205/407 (50%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+ +A +++ D +  G  P VVTY +L++A C+   F     +L+ MR  G +P+
Sbjct: 186 LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 245

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  + + L+ +   G  PD  SY +++  L    + ++   +F 
Sbjct: 246 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA 305

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TF++++   C+    + A+++   +  HG        NI+I  +CK G
Sbjct: 306 EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 365

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A   L  +G  G +P+ I+YTT++K   R  +++   E+L  M RK    +   + 
Sbjct: 366 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G +++AT  +EQM   G +++IV+YN L+N +C +G++++A  L   M  +
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 485

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T+T L+ GLC A  +  A   L  M +     N+  +N +V    + G +D A
Sbjct: 486 P---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + E M       +  TY++++  + K      A +LL   + +GV
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGV 589



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 181/407 (44%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E  E +  + +    +P+ VT++ML+  +C+    +    +L +M   G + +
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 350

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N +I    +   +  +   L+ M   G  PD  SY +++  L +  + ++A  + +
Sbjct: 351 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 410

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TFN  +  LC+    + A  +   + +HG    +VTYN L+ G C  G
Sbjct: 411 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 470

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+ +A  +   +      PN ITYTT++       +     E+L+ M +K    +   + 
Sbjct: 471 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 527

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +++ F + G + EA + +EQM+  G   ++++YNTL++   K+   E A  LL  +   
Sbjct: 528 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 587

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T++ +I  L +   ++ A      +  +G       YN I+  L K    D A
Sbjct: 588 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 647

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I+ F  M     + +  TY +++  L     L     LL      GV
Sbjct: 648 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 157/337 (46%), Gaps = 3/337 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI + T CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 350 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M      P+ VT+N+ I    +  L+  +  L+++M E G   ++ +YN+L++     
Sbjct: 410 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D A  +F  M C    P T T+  +L GLC     D A  +   + +    P +VT+
Sbjct: 470 GRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 526

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G +  A  +++++ + G  PN ITY T++    ++   +  LE+L  +  
Sbjct: 527 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 586

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + D   Y ++I    +  R++EA      +   G++   V YN ++   CK    + 
Sbjct: 587 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 646

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A      M   G   ++ T+  LI+GL     +K  R
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 683



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 202
           ++  LC+   T +A R+ R  ++ G   ++  YN L+ G C+ G+L  AR          
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 174

Query: 203 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                  I++ L D G                  P+ +TYT +++   ++  +   +E+L
Sbjct: 175 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 234

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ KG T +   Y  +I    + GR+ +A +++ ++ + G Q D VSY T++   C  
Sbjct: 235 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            + E    L  EM ++    ++ T  +L+   C+ G ++ A   LE M+  G  +N    
Sbjct: 295 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 354

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N +++ + K G++D A     +M       D+ +Y++++  LC+A+R   A +LL
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C  C+   +E+A  +I      G   ++VTYN L++ +C     D+   +   M 
Sbjct: 424 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 482

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ +TY +L+ G      L  + +LL EML+    P+V ++N L+    Q G  D
Sbjct: 483 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 540

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + M+    TP   T+N +L+G+ K+  ++ AL +  GL  +G  P++VTY+ +I
Sbjct: 541 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L +  R+  A  +   + D G  P A+ Y  I+    +       ++  + M   G  
Sbjct: 601 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCM 660

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y T+I        LKE  D + ++ + GV
Sbjct: 661 PNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 7/253 (2%)

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           +  A R+       G  P++     LI+ LC+ GR   A  +L+    SG A +   Y T
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R  +      ++++M       D + Y  +I      GR+ EA   ++ M+  G
Sbjct: 150 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            Q  +V+Y  L+   CK      A  +LDEM  +G   +  T+ ++I+G+C+ G +  AR
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             L  ++  GF  +  +Y  ++  L    + +    +F  M  K    +  T+  +V   
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 399 CKAKRLPSASKLL 411
           C+   +  A ++L
Sbjct: 327 CRGGMVERAIQVL 339



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/183 (19%), Positives = 78/183 (42%), Gaps = 7/183 (3%)

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +++  + G   D+     LI   C+ G+   A  +L   E+ G   D + +  L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G C+ G +  AR  +  M  +  D+    Y  I+  L   G++  A+++ + M  +    
Sbjct: 153 GYCRYGQLDAARRLIASM-PVAPDAY--TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
              TY+ ++  +CK+     A ++L      G          +++G+   G   +A++  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 447 SKI 449
           +++
Sbjct: 270 NRL 272


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 220/436 (50%), Gaps = 4/436 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+ ++L  A A++   ++LG  PD+VT + L++ YC          ++++M  
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P+ VT+N+LI G   ++  S ++ L+D M+  G  PD+++Y ++++ L + G  D 
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M  G +      +  +++ LC  +  ++AL +F  +   G  P +VTYN LI+
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L ++ +    PN +T++ ++    +  K     ++   M ++    
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I  F    RL EA    E M++     ++V+YNTLI  +CK  ++E    L 
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+  LI GL +AG+   A+   + M   G   ++  Y+ ++D L K 
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK++ A+ VFE ++      D +TY+ M+  +CKA ++     L  S    GV+      
Sbjct: 463 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522

Query: 427 KAVVDGLRHSGCRREA 442
             ++ G    G + EA
Sbjct: 523 TTMISGFCRKGLKEEA 538



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 196/382 (51%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A+I   +  G  PD+ TY  +++  C+    D   ++L +M +  I  DVV Y
Sbjct: 183 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 242

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
            ++I        ++ +L+L  EM   GI P+V +YNSL+ CL   G+  +A+R+  DMI 
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TF+ +++   K      A +++  + K    P++ TY+ LI G C   RL  
Sbjct: 303 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ + + +      PN +TY T++K   + ++ + G+E+   M ++G   +   Y T+I 
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              + G    A    ++MV+DGV  DI++Y+ L++  CK GKLE A ++ + ++K   E 
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D YT+ I+I+G+CKAG ++        ++  G   N+  Y  ++    + G  + A  +F
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 381 ESMEVKDSFTYSSMVHNLCKAK 402
             M+   +   S   + L +A+
Sbjct: 543 REMKEDGTLPNSGTYNTLIRAR 564



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 191/401 (47%), Gaps = 5/401 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++ A +++    +  +  DVV Y  +IDA C + + +    +   M   GI P+
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI         S +  LL +M+E  I P+V ++++L+    + GK  EA +++ 
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   + P   T++ ++NG C +   D A  MF  +      P +VTYN LIKG CKA 
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+     +  +I   M   G   D   Y 
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G+L++A    E +    ++ DI +YN +I   CK GK+E  + L   +  +
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +   +T +I G C+ G  + A      M + G   N   YN ++    +DG    +
Sbjct: 514 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 573

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             + + M     V D+ T  SMV N+    RL  +   +LS
Sbjct: 574 AELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSYLEMLS 613



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 200/416 (48%), Gaps = 4/416 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +L+ A  +  + ++   LP +V +N L+ A  +   FD   ++  RM+   IS D+ +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI    R S L  +L +L +M+++G  PD+ + +SL++      +  EA  +   M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           +  P T TFN +++GL  +     A+ +   +   G  P+L TY  ++ GLCK G +  A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +LK++       + + YTTI+      +     L + + M  KG   +   Y ++I  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V+++ LI+ + KEGKL  A  L DEM K+  + D
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T++ LI+G C    +  A+   E M       N+  YN ++    K  +++  + +F 
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            M     V ++ TY++++  L +A     A K+    +  GV         ++DGL
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 185/411 (45%), Gaps = 9/411 (2%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           ++ N+L+D     +  D    +   M ++   P +V +N L++   + +     + L + 
Sbjct: 35  LSRNVLLD-----LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 89

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M  + I  D++SYN L++C  +  +   A  V   M+     P   T + +LNG C  + 
Sbjct: 90  MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 149

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A+ +   +    + P  VT+N LI GL    +   A  ++  +   G  P+  TY T
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +     L L +L  M++     D   Y T+I A      + +A +   +M   G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ ++V+YN+LI   C  G+   A  LL +M ++    +  T + LID   K G +  A 
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 398
              + M K   D ++  Y+ +++      ++D A ++FE M  KD F    TY++++   
Sbjct: 330 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 389

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           CKAKR+    +L     + G+         ++ GL  +G    A+KI  K+
Sbjct: 390 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 115/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+E+   +  +  + G++ + VTYN LI    Q    D    I  +M  
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 442

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G  +   L  +L + + + +  + PD+++YN ++  + + GK ++
Sbjct: 443 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 502

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P    +  M++G C+    + A  +FR +++ G +P   TYN LI+
Sbjct: 503 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 562

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G   +A T + ++      R  K  LE+LS
Sbjct: 563 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 613



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +    +A   + A+ I    +  GV PD++TY++L+D  C++   +    + 
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 472

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             ++++ + PD+ TYN +I G  +   +    DL   +   G+ P+V  Y +++    + 
Sbjct: 473 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  +EA+ +F++M      P + T+N ++    ++     +  + + ++  GFV +  T 
Sbjct: 533 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 592

Query: 186 NILIKGLCKAGRLRTA 201
           +++I  L   GRL  +
Sbjct: 593 SMVINML-HDGRLEKS 607



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 4/263 (1%)

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +  E+  S   P+ + +  ++    +  K+ L + +   M+    ++D + Y 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F +  +L  A   + +M+  G + DIV+ ++L+N YC   ++  A  L+D+M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
            ++ +  T   LI GL        A   ++ M   G   +L  Y  +V+ L K G ID A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++ + ME      D   Y++++  LC  K +  A  L       G+R       +++  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 433 LRHSGCRREAKKIQSKIRMAKIS 455
           L + G   +A ++ S +   KI+
Sbjct: 284 LCNYGRWSDASRLLSDMIERKIN 306


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 212/422 (50%), Gaps = 4/422 (0%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I  G+ P V TYN++ID  C+    +    +  +MRE G+SPDVVTYNSLI G  +  
Sbjct: 220 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 279

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L     L +EM ++G  PD+ +YN L++C  +  K   A   F +M    L P   T++
Sbjct: 280 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 339

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++  CK      A+++   +++ G +P   TY  LI   CKAG L  A  +L ++  +
Sbjct: 340 TLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA 399

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G   N +TYT ++    +  +     E+  +M + G + +   Y  ++  ++K  R+++A
Sbjct: 400 GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDA 459

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              ++QM    ++ D++ Y ++I  +C + KLE   L+L+EM+ +G   +    T +ID 
Sbjct: 460 MKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDA 519

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KD 387
             KAG    A    + M  +G ++ +  Y  ++D L + G ++ A++ F  M       +
Sbjct: 520 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPN 579

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              Y+S++  LC    + SA KL       G+    +A  A++DG    G  +EA  + S
Sbjct: 580 VAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 639

Query: 448 KI 449
           ++
Sbjct: 640 RM 641



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 206/439 (46%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   LE +  + +    +G+ PDVVTYN LID Y +  S +   ++ N M++
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD++TYN LI    +   +  + +   EM   G+ P+V +Y++L+    + G    
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 353

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++  DM    L P   T+  +++  CK      A ++   + + G    +VTY  L+ 
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 413

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAGR+  A  + + +   G +PN   YT ++    +  + +  ++IL  M       
Sbjct: 414 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 473

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I       +L+E    +E+M + G+  + V   T+I+ Y K GK   A    
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFF 533

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+  G E    T+ +LIDGLC+AG ++ A  +   M  +G   N+  Y  ++D L  +
Sbjct: 534 QEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXN 593

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             I+ A  +F+ M+ +    D   +++++    K   L  A  L+    +  +       
Sbjct: 594 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 653

Query: 427 KAVVDGLRHSGCRREAKKI 445
            ++V G    G   +A+K 
Sbjct: 654 TSLVSGFSQCGELHQARKF 672



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 185/367 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++ +A     +    G+ P+VVTY+ LIDA+C+         +L  MR  G+ P+
Sbjct: 310 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN 369

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY SLI    +   L+ +  LL++ML+ G+  ++ +Y +L+  L + G+  EA  VF+
Sbjct: 370 EFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR 429

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++P    +  +++G  K    ++A+++ + + +    P+L+ Y  +I G C   
Sbjct: 430 SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQR 489

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L   + IL+E+   G + N +  TTI+   F+  K    L     M+  G       YC
Sbjct: 490 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 549

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    + G ++ A DY  +M++ G+Q ++  Y +LI+  C    +E+A  L DEM+ +
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D    T LIDG  K GN++ A + +  M ++  + +L  Y  +V    + G++  A
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQA 669

Query: 377 INVFESM 383
              F  M
Sbjct: 670 RKFFNEM 676



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 164/338 (48%), Gaps = 6/338 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   S N L+H L + G      + F DMI   + P   T+N+M++ LCK    +N+ R+
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  +++ G  P++VTYN LI G  K G L     +  E+ D G  P+ ITY  ++ C  +
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
             K     E  S MK  G   +   Y T+I AF K G ++ A   +  M   G+  +  +
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y +LI+  CK G L  A+ LL++M + G + +  T+T L+DGLCKAG +  A      M 
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 405
           K G   N + Y  +V    K  +++ A+ + + M       D   Y S++   C  ++L 
Sbjct: 433 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL- 491

Query: 406 SASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREA 442
             +KL+L  +KS G+         ++D    +G   +A
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 198/441 (44%), Gaps = 39/441 (8%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            +++L   + +    +      +RMR     P   + N L+   +++          ++M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +  GI P V++YN ++  L + G  + + R+F  M    L+P   T+N +++G  K    
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           +    +F  ++  G VP+++TYN LI   CK  ++  A     E+ ++G  PN +TY+T+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +    +  +++L  M+R G   + F Y ++I A  K G L EA   +  M+  GV
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-- 341
           +L+IV+Y  L++  CK G++  A  +   M K G   ++  +T L+ G  KA  ++ A  
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 342 ---------------------------------RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
                                            +L LE M   G  +N      I+D   
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521

Query: 369 KDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K GK   A+N F+ M+   V+ +  TY  ++  LC+A  +  A       L  G++   +
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
              +++DGL  + C   AKK+
Sbjct: 582 VYTSLIDGLCXNNCIESAKKL 602



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 161/367 (43%), Gaps = 55/367 (14%)

Query: 99  LLDEMLEMGIP-----PDVWS-----------YNSLMHCLFQLGKPDEANRVFQDMICGD 142
           +++  ++MG P       +WS           ++ L     +LG  +EAN  F  M    
Sbjct: 131 IMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFR 190

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   + N +L+ L K+       + F  +   G  P + TYN++I  LCK G L  +R
Sbjct: 191 TLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSR 250

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  ++ + G +P+ +TY +++                          DG+G        
Sbjct: 251 RLFVQMREMGLSPDVVTYNSLI--------------------------DGYG-------- 276

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K+G L+E      +M   G   DI++YN LIN YCK  K+  A+    EM+  G + + 
Sbjct: 277 -KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T++ LID  CK G ++GA   L  M + G   N   Y  ++D   K G +  A  +   
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 383 M---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M    VK +  TY++++  LCKA R+  A ++  S LK G+   +    A+V G   +  
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 439 RREAKKI 445
             +A KI
Sbjct: 456 MEDAMKI 462



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 7/319 (2%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LNI   T      CKA R+ +AE +    ++ G+ P+   Y  L+  Y +    +    I
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 462

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L +M E  I PD++ Y S+I G      L  +  +L+EM   GI  +     +++   F+
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 522

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK  +A   FQ+M    +     T+ ++++GLC+    + A+  F  +   G  P +  
Sbjct: 523 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAV 582

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLC    + +A+ +  E+   G  P+   +T ++    ++   +  L ++S M 
Sbjct: 583 YTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMT 642

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                FD   Y ++++ F + G L +A  +  +M+  G+  + V    L+  Y K G+L+
Sbjct: 643 ELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLD 702

Query: 305 AAYLLLDEMEKQG--FECD 321
            A  L +EME+    FE D
Sbjct: 703 EAIELKNEMERMAYSFEFD 721



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 40/385 (10%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCK   ++ A  ++ D  R G+LP+  TY  LIDA C+  +    + +LN M +AG+  
Sbjct: 344 AFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKL 403

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++VTY +L+ G  +   +  + ++   ML+ GI P+   Y +L+H   +  + ++A ++ 
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRY--------------------------------- 162
           + M   ++ P    +  ++ G C  R                                  
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523

Query: 163 --TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
             + +AL  F+ +Q  G    +VTY +LI GLC+AG +  A      +   G  PN   Y
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVY 583

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T+++     N   +   ++   M+ +G T D   +  +I   +K G L+EA   + +M  
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 643

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
             ++ D+  Y +L++ + + G+L  A    +EM ++G   ++     L+    K G +  
Sbjct: 644 LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDE 703

Query: 341 A---RLHLEYMN-KIGFDSNLEAYN 361
           A   +  +E M     FD+ L AYN
Sbjct: 704 AIELKNEMERMAYSFEFDAQL-AYN 727


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 195/368 (52%), Gaps = 1/368 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V T+N+L++  C+         I + +R+ G+ P  V++N+LI G  ++  L   
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L   M E  + PDV++Y++L+  L +  + ++AN +F++M    L P   TF  ++NG
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CKN   D AL +++ +   G   +LV YN LI GLCK G  R AR  + E+   G  P+
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TYTT++    +    +L LE+   M ++G   D   +  +I+   + G++ +A   + 
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G++ D  +Y  +++ +CK+G ++  + LL EM+  G      T+ +L++GLCK G
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFTYSSMV 395
            +K A + L  M  +G   +   YN ++    K GK+    NV   M  V D  +Y S++
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLL 586

Query: 396 HNLCKAKR 403
           H L KA +
Sbjct: 587 HELSKASK 594



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 171/328 (52%), Gaps = 4/328 (1%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L+   E+L+ G PP+V+++N LM+ L + GK  +A  +F ++    L P   +FN ++N
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+   +   R+   +++    P++ TY+ LI GLCK  +L  A  + KE+ D G  P
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T+TT++    +N +  L LEI   M  KG   D   Y T+I    K G  +EA  ++
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M   G+  D  +Y TL++  CKEG LE A  +  EM K+G + D    T +I GLC+ 
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G I  A   L  M + G   +   Y  ++D   K G +     + + M+    +    TY
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + +++ LCK  ++ +A  LL + L  GV
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGV 543



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 179/363 (49%), Gaps = 3/363 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   CK  +++ A+ I  +  + G+ P  V++N LI+ YC+  + + G+ +   M 
Sbjct: 235 FNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVME 294

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  + PDV TY++LI G  +   L  +  L  EM + G+ P+  ++ +L++   + G+ D
Sbjct: 295 EFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVD 354

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  ++Q M    L      +N +++GLCK  Y   A +    + K G +P+  TY  L+
Sbjct: 355 LALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLL 414

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK G L  A  + KE+   G   + + +T I+    R+ K       L  M R G  
Sbjct: 415 DGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLK 474

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  V+  F K G +K     +++M +DG    +++YN L+N  CK+G+++ A +L
Sbjct: 475 PDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADML 534

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   G   D  T+ IL+ G CK G +   +       ++G  S+  +Y  ++  L K
Sbjct: 535 LNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQ---NVKTEMGLVSDYASYRSLLHELSK 591

Query: 370 DGK 372
             K
Sbjct: 592 ASK 594



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 184/398 (46%), Gaps = 15/398 (3%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T++  + +YC  V F     I +RM +   S      + +++   + S  S    +L+  
Sbjct: 105 TFSHTVQSYCSMVHF----LIAHRMNQQAES----LLHFVVSRKGKGSASSVFASILETK 156

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G     + +++LM    + G   +A + F+     +L         +L  + K    
Sbjct: 157 ---GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSP 213

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL  +  +   G+ P + T+N+L+  LCK G+++ A+ I  E+  +G  P A+++ T+
Sbjct: 214 MVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTL 273

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++   + G  +   M+      D F Y  +I    K  +L++A    ++M   G+
Sbjct: 274 INGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGL 333

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             + V++ TLIN  CK G+++ A  +  +M  +G + D   +  LIDGLCK G  + AR 
Sbjct: 334 VPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARK 393

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            +  M K G   +   Y  ++D   K+G ++ A+ + + M  +    D+  +++++  LC
Sbjct: 394 FVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLC 453

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +  ++  A + L   L++G++        V+DG    G
Sbjct: 454 RDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKG 491



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 98/201 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  +   CK     +A   + +  + G++PD  TY  L+D  C+    +    +   M
Sbjct: 374 LYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEM 433

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + GI  D V + ++I+G  R+  +  +   L EML  G+ PD  +Y  +M    + G  
Sbjct: 434 VKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDV 493

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
               ++ ++M      P   T+N+++NGLCK     NA  +   +   G VP+ +TYNIL
Sbjct: 494 KMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNIL 553

Query: 189 IKGLCKAGRLRTARWILKELG 209
           ++G CK G+L   + +  E+G
Sbjct: 554 LQGHCKHGKLGDFQNVKTEMG 574



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 103/193 (53%), Gaps = 6/193 (3%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++   +K+     A ++  +++  G   ++ ++N L+N  CKEGK++ A L+ DE+ K G
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG 262

Query: 318 FECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
            +    +   LI+G CK+GN++ G RL +  M +     ++  Y+ ++D L K+ +++ A
Sbjct: 263 LQPTAVSFNTLINGYCKSGNLEEGFRLKM-VMEEFRVFPDVFTYSALIDGLCKECQLEDA 321

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            ++F+ M     V +  T++++++  CK  R+  A ++       G++        ++DG
Sbjct: 322 NHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDG 381

Query: 433 LRHSGCRREAKKI 445
           L   G  REA+K 
Sbjct: 382 LCKGGYFREARKF 394


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 205/415 (49%), Gaps = 10/415 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   C    + +A  ++   +  G  P VVTY  L+   C+    D  Y +L R+ 
Sbjct: 253 FNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP 312

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E     +VV  N++I G      L+ + +L + M   G PPDV +YN LMH L +LG+  
Sbjct: 313 EV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCG 368

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A R+  +M      P   T++ +L+  C+N   D+A  M   +   GF      YN +I
Sbjct: 369 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L K G+L  A  +++E+   G  P+  TY TI+     N +      I   +  +G  
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVV 488

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +G  Y T+I A +  GR +E      +MV  G  LD+VSYN LI   CKEG ++ + +L
Sbjct: 489 ANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMML 548

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L+EM  +G + + +++ +LI+ LCKAG ++ A  L  E +N+ G   ++  YN +++ L 
Sbjct: 549 LEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ-GLTPDIVTYNTLINGLC 607

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           K G    A+N+ E +  +    D  TY+ ++   CK + L  AS LL   +  G+
Sbjct: 608 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 221/480 (46%), Gaps = 37/480 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  N  + T  +A+    A  +    +R  V P   T+ +   A C+         +L
Sbjct: 144 SFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALL 203

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G  PD V Y ++I        ++ +  LLDEML MG   DV ++N ++  L  L
Sbjct: 204 RGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGL 263

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF--------------- 170
           G   EA R+   M+    TP   T+  +L GLC+ R  D A  M                
Sbjct: 264 GHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVI 323

Query: 171 RG----------------LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           RG                +   G  P++ TYNIL+ GLCK GR  +A  +L E+ + G A
Sbjct: 324 RGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCA 383

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +TY+T++    RN  +     +L  M  KG++ +  GY  +I A  K G+L EA   
Sbjct: 384 PNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRL 443

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M + G + DI +YNT+I   C   +++ A  +   + ++G   +  T+  LI  L  
Sbjct: 444 VQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLH 503

Query: 335 AGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           +G  + G RL  E M   G   ++ +YN ++  L K+G +D ++ + E M  K    ++F
Sbjct: 504 SGRWQEGLRLANE-MVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNF 562

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +Y+ +++ LCKA ++  A +L    L  G+         +++GL   G    A  +  K+
Sbjct: 563 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 162/328 (49%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PDV TYN+L+   C+     +   +L+ M E G +P++VTY++L+    RN +   +
Sbjct: 346 GCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 405

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +LD+M   G   +   YN +++ L + GK DEA R+ Q+M      P   T+N ++  
Sbjct: 406 RAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYH 465

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC N   D A  +F  L + G V   +TYN LI  L  +GR +    +  E+   G   +
Sbjct: 466 LCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLD 525

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++Y  ++K   +       + +L  M  KG   + F Y  +I    K G++++A +  +
Sbjct: 526 VVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSK 585

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G+  DIV+YNTLIN  CK G   AA  LL+++  +    D  T+ ILI   CK  
Sbjct: 586 EMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 645

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +  A + L+     G   N   +  +V
Sbjct: 646 LLDDASMLLDKAVSGGIVPNERTWGMMV 673



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 44/394 (11%)

Query: 96  SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
           +L LLD+M     + P   SYN+++  L +     +A  +++ M+   + P T TF +  
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELV------------------------------- 183
             LC+     +AL + RG+ +HG VP+ V                               
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 184 ----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
               T+N ++ GLC  G +R A  ++  +   G  P+ +TY  +++   R R+      +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L  +             TVI   +  G+L  AT+  E M + G   D+ +YN L++  CK
Sbjct: 308 LGRVPEVNVVM----LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G+  +A  +LDEME++G   +  T++ L+   C+ G    AR  L+ M+  GF  N + 
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN I+  LGKDGK+D A+ + + M+ +    D  TY++++++LC   ++  A  +  + L
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + GV         ++  L HSG  +E  ++ +++
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 164/324 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  R   A  ++ +    G  P++VTY+ L+ ++C+   +D    +L++M  
Sbjct: 355 NILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSA 414

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G S +   YN +I    ++  L  ++ L+ EM   G  PD+ +YN++++ L    + DE
Sbjct: 415 KGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDE 474

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +++   +     T+N +++ L  +      LR+   +  HG   ++V+YN LIK
Sbjct: 475 AEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIK 534

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK G +  +  +L+E+   G  PN  +Y  ++    +  K +  LE+   M  +G T 
Sbjct: 535 ALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 594

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K+G    A + +E++  + V  DIV+YN LI+ +CK   L+ A +LL
Sbjct: 595 DIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLL 654

Query: 311 DEMEKQGFECDKYTHTILIDGLCK 334
           D+    G   ++ T  +++    +
Sbjct: 655 DKAVSGGIVPNERTWGMMVQNFVR 678



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 8/312 (2%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           +TP   ++N +L+ L +     +AL ++R + +    P   T+ +  + LC+ GR R A 
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDAL 200

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L+ +   G  P+A+ Y T++              +L  M   G   D   +  V+   
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGL 260

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
             +G ++EA   +++M+  G    +V+Y  L+   C+  + + AY +L  +     E + 
Sbjct: 261 CGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVP----EVNV 316

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
                +I G    G +  A    E M   G   ++  YN ++  L K G+   A+ + + 
Sbjct: 317 VMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE 376

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ME K    +  TYS+++H+ C+      A  +L      G  +       ++  L   G 
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436

Query: 439 RREAKKIQSKIR 450
             EA ++  +++
Sbjct: 437 LDEAMRLVQEMK 448


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 199/401 (49%), Gaps = 4/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++    R G   DV  YN L+  YC++   DA   ++  M    ++PD
Sbjct: 88  LCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPD 144

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  +I G      +  +L LLD+ML  G  P V +Y  L+  + +     +A  V  
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A      L  +GF P+ V+Y  ++KGLC A 
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R      +  E+ +    PN +T+  +++   R    +  +++L  M   G   +     
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI    K GR+ +A  ++  M + G   D +SY T++   C+  + E A  LL EM ++
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I+ A + +E M++ G + N+  YN +V+     G++D A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + +F SM  K ++ TY++++  LC A+RL +A++LL   L+
Sbjct: 445 LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 205/407 (50%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+ +A +++ D +  G  P VVTY +L++A C+   F     +L+ MR  G +P+
Sbjct: 155 LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 214

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  + + L+ +   G  PD  SY +++  L    + ++   +F 
Sbjct: 215 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA 274

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TF++++   C+    + A+++   +  HG        NI+I  +CK G
Sbjct: 275 EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A   L  +G  G +P+ I+YTT++K   R  +++   E+L  M RK    +   + 
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G +++AT  +EQM   G +++IV+YN L+N +C +G++++A  L   M  +
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 454

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T+T L+ GLC A  +  A   L  M +     N+  +N +V    + G +D A
Sbjct: 455 P---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + E M       +  TY++++  + K      A +LL   + +GV
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGV 558



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 181/407 (44%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E  E +  + +    +P+ VT++ML+  +C+    +    +L +M   G + +
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N +I    +   +  +   L+ M   G  PD  SY +++  L +  + ++A  + +
Sbjct: 320 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TFN  +  LC+    + A  +   + +HG    +VTYN L+ G C  G
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+ +A  +   +      PN ITYTT++       +     E+L+ M +K    +   + 
Sbjct: 440 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +++ F + G + EA + +EQM+  G   ++++YNTL++   K+   E A  LL  +   
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 556

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T++ +I  L +   ++ A      +  +G       YN I+  L K    D A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I+ F  M     + +  TY +++  L     L     LL      GV
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 157/337 (46%), Gaps = 3/337 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI + T CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M      P+ VT+N+ I    +  L+  +  L+++M E G   ++ +YN+L++     
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D A  +F  M C    P T T+  +L GLC     D A  +   + +    P +VT+
Sbjct: 439 GRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G +  A  +++++ + G  PN ITY T++    ++   +  LE+L  +  
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 555

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + D   Y ++I    +  R++EA      +   G++   V YN ++   CK    + 
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A      M   G   ++ T+  LI+GL     +K  R
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 202
           ++  LC+   T +A R+ R  ++ G   ++  YN L+ G C+ G+L  AR          
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 143

Query: 203 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                  I++ L D G                  P+ +TYT +++   ++  +   +E+L
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ KG T +   Y  +I    + GR+ +A +++ ++ + G Q D VSY T++   C  
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            + E    L  EM ++    ++ T  +L+   C+ G ++ A   LE M+  G  +N    
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N +++ + K G++D A     +M       D+ +Y++++  LC+A+R   A +LL
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C  C+   +E+A  +I      G   ++VTYN L++ +C     D+   +   M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 451

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ +TY +L+ G      L  + +LL EML+    P+V ++N L+    Q G  D
Sbjct: 452 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + M+    TP   T+N +L+G+ K+  ++ AL +  GL  +G  P++VTY+ +I
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L +  R+  A  +   + D G  P A+ Y  I+    +       ++  + M   G  
Sbjct: 570 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCM 629

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y T+I        LKE  D + ++ + GV
Sbjct: 630 PNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 7/230 (3%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N  ++ L     L  A  ++      G AP+    T +++   R  +      +L A +R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D F Y T++A + + G+L  A   +  M    V  D  +Y  +I   C  G++  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LLD+M  +G +    T+T+L++ +CK+     A   L+ M   G   N+  YN I++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 366 RLGKDGKIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
            + ++G++D A   +N   S   + D+ +Y++++  LC AKR     +L 
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L EA   +++  + G   D+     LI   C+ G+   A  +L   E+ G   D + +  
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L+ G C+ G +  AR  +  M  +  D+    Y  I+  L   G++  A+++ + M  + 
Sbjct: 119 LVAGYCRYGQLDAARRLIASM-PVAPDAY--TYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
                 TY+ ++  +CK+     A ++L      G          +++G+   G   +A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 444 KIQSKI 449
           +  +++
Sbjct: 236 EFLNRL 241


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 199/401 (49%), Gaps = 4/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++    R G   DV  YN L+  YC++   DA   ++  M    ++PD
Sbjct: 88  LCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPD 144

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  +I G      +  +L LLD+ML  G  P V +Y  L+  + +     +A  V  
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A      L  +GF P+ V+Y  ++KGLC A 
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R      +  E+ +    PN +T+  +++   R    +  +++L  M   G   +     
Sbjct: 265 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 324

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI    K GR+ +A  ++  M + G   D +SY T++   C+  + E A  LL EM ++
Sbjct: 325 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I+ A + +E M++ G + N+  YN +V+     G++D A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + +F SM  K ++ TY++++  LC A+RL +A++LL   L+
Sbjct: 445 LELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 204/407 (50%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+ +A +++ D +  G  P VVTY +L++A C+   F     +L+ MR  G +P+
Sbjct: 155 LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 214

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  + + L+ +   G  PD  SY +++  L    + ++   +F 
Sbjct: 215 IVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA 274

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TF++++   C+    + A+++   +  HG        NI+I  +CK G
Sbjct: 275 EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQG 334

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A   L  +G  G +P+ I+YTT++K   R  +++   E+L  M RK    +   + 
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G +++AT  +EQM   G +++IV+YN L+N +C +G++++A  L   M  +
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 454

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T+T L+ GLC A  +  A   L  M +     N+  +N +V    + G +D A
Sbjct: 455 P---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + E M       +  TY++++  +        A +LL   + +GV
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGV 558



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 180/407 (44%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E  E +  + +    +P+ VT++ML+  +C+    +    +L +M   G + +
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N +I    +   +  +   L+ M   G  PD  SY +++  L +  + ++A  + +
Sbjct: 320 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TFN  +  LC+    + A  +   + +HG    +VTYN L+ G C  G
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+ +A  +   +      PN ITYTT++       +     E+L+ M +K    +   + 
Sbjct: 440 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +++ F + G + EA + +EQM+  G   ++++YNTL++    +   E A  LL  +   
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSN 556

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T++ +I  L +   ++ A      +  +G       YN I+  L K    D A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I+ F  M     + +  TY +++  L     L     LL      GV
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 3/337 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI + T CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M      P+ VT+N+ I    +  L+  +  L+++M E G   ++ +YN+L++     
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D A  +F  M C    P T T+  +L GLC     D A  +   + +    P +VT+
Sbjct: 439 GRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G +  A  +++++ + G  PN ITY T++     +   +  LE+L  +  
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVS 555

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + D   Y ++I    +  R++EA      +   G++   V YN ++   CK    + 
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A      M   G   ++ T+  LI+GL     +K  R
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 36/295 (12%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 202
           ++  LC+   T +A R+ R  ++ G   ++  YN L+ G C+ G+L  AR          
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 143

Query: 203 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                  I++ L D G                  P+ +TYT +++   ++  +   +E+L
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ KG T +   Y  +I    + GR+ +A +++ ++ + G Q D VSY T++   C  
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            + E    L  EM ++    ++ T  +L+   C+ G ++ A   LE M+  G  +N    
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N +++ + K G++D A     +M       D+ +Y++++  LC+A+R   A +LL
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 3/274 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C  C+   +E+A  +I      G   ++VTYN L++ +C     D+   +   M 
Sbjct: 393 FNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM- 451

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ +TY +L+ G      L  + +LL EML+    P+V ++N L+    Q G  D
Sbjct: 452 --PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMD 509

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + M+    TP   T+N +L+G+  +  ++ AL +  GL  +G  P++VTY+ +I
Sbjct: 510 EAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L +  R+  A  +   + D G  P A+ Y  I+    +       ++  + M   G  
Sbjct: 570 GVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCM 629

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y T+I        LKE  D + ++ + GV
Sbjct: 630 PNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 7/230 (3%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N  ++ L     L  A  ++      G AP+    T +++   R  +      +L A +R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D F Y T++A + + G+L  A   +  M    V  D  +Y  +I   C  G++  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LLD+M  +G +    T+T+L++ +CK+     A   L+ M   G   N+  YN I++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 366 RLGKDGKIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
            + ++G++D A   +N   S   + D+ +Y++++  LC AKR     +L 
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L EA   +++  + G   D+     LI   C+ G+   A  +L   E+ G   D + +  
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L+ G C+ G +  AR  +  M  +  D+    Y  I+  L   G++  A+++ + M  + 
Sbjct: 119 LVAGYCRYGQLDAARRLIASM-PVAPDA--YTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
                 TY+ ++  +CK+     A ++L      G          +++G+   G   +A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 444 KIQSKI 449
           +  +++
Sbjct: 236 EFLNRL 241


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 198/396 (50%), Gaps = 4/396 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++      G   DV  YN L+  YC++   DA   ++  M    + PD
Sbjct: 84  LCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPD 140

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  +I G      +  +L LLD+ML+ G  P V +Y  L+  + +     EA  V  
Sbjct: 141 AYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLD 200

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A  +   L  +GF P++V+Y  ++KGLC A 
Sbjct: 201 EMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAAR 260

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R    + +  E+ D    PN +T+  +++   R    +  +++L  M + G T +     
Sbjct: 261 RWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCN 320

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI A  K GR+ +A D++  M   G   D +SY T++   C+ G+ E A  LL EM ++
Sbjct: 321 IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 380

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I+ A   +E M + G    +  YN +V      G++D A
Sbjct: 381 NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA 440

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
           + +F ++  + ++ TY++++  LC A+RL +A++LL
Sbjct: 441 LELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELL 476



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 214/438 (48%), Gaps = 7/438 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A A++ D ++ G  P VVTY +L++A C+   F     +L+ MR  G +P+
Sbjct: 151 LCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPN 210

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  + ++L+ +   G  PD+ SY +++  L    + D+   +F 
Sbjct: 211 IVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFA 270

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P   TF++++   C+    + A+++ + + +HG  P     NI+I  +CK G
Sbjct: 271 EMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQG 330

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A   L  +G  G  P+ I+YTT+++   R  +++   E+L  M RK    +   + 
Sbjct: 331 RVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G +++A   +E M   G  + IV+YN L++ +C +G++++A  L + +   
Sbjct: 391 TFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-- 448

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             E +  T+T L+ GLC A  +  A   L  M +     N   +N +V    + G ++ A
Sbjct: 449 -CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEA 507

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + +   M       +  T+++++  + K      A +LL   +  GV +      +VVD 
Sbjct: 508 MELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDV 567

Query: 433 LRHSGCRREAKKIQSKIR 450
           L       EA ++   ++
Sbjct: 568 LSREDRTEEAIQMLHAVQ 585



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 3/347 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI +   CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M      P+ VT+N+ I    +  L+  ++ L++ M E G    + +YN+L+H     
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D A  +F ++ C    P T T+  +L GLC     D A  +  G+ +       VT+
Sbjct: 435 GRVDSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTF 491

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G +  A  ++ ++ + G  PN IT+ T++    ++   +  LE+L  +  
Sbjct: 492 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 551

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG + D   Y +V+    +  R +EA   +  +   G++  +  YN ++   CK  + + 
Sbjct: 552 KGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ 611

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           A      M   G   ++ T+ ILI+GL   G +K AR  L  +   G
Sbjct: 612 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 174/376 (46%), Gaps = 3/376 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+   +E+A  ++    + G  P+    N++I+A C+    D  Y  LN M   G +PD
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            ++Y +++ G  R      + +LL EM+    PP+  ++N+ +  L Q G  ++A ++ +
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M     +    T+N +++G C     D+AL +F  L      P  +TY  L+ GLC A 
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAE 467

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  +L  +       NA+T+  ++    +    +  +E+++ M   G T +   + 
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    K    +EA + +  +V+ GV LD ++Y++++++  +E + E A  +L  ++  
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G       +  ++  LCK      A     YM   G   N   Y  +++ L  +G +  A
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 647

Query: 377 INVFESMEVKDSFTYS 392
             V   +  K   + S
Sbjct: 648 RYVLSELYAKGVLSKS 663



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 44/299 (14%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++  LC+   T +A R+ R  +  G   ++  YN L+ G C+ GRL  AR ++  +    
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---P 136

Query: 213 HAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
             P+A TYT I++  C R R     L +L  M ++G       Y  ++ A  K     EA
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGD-ALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEA 195

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            + +++M   G   +IV+YN +IN  C+EG+++ A  +L+ +   GF+ D  ++T ++ G
Sbjct: 196 MNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKG 255

Query: 332 LCKA-----------------------------------GNIKGARLHLEYMNKIGFDSN 356
           LC A                                   G ++ A   L+ M++ G   N
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPN 315

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
               N +++ + K G++D A +   +M +     D+ +Y++++  LC+A R   A +LL
Sbjct: 316 TTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C  C+   +E+A  +I      G    +VTYN L+  +C     D+   + N + 
Sbjct: 389 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL- 447

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ +TY +L+ G      L  + +LL  M++   P +  ++N L+    Q G  +
Sbjct: 448 --PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVE 505

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +   M+    TP   TFN +L+G+ K+  ++ AL +  GL   G   + +TY+ ++
Sbjct: 506 EAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVV 565

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L +  R   A  +L  + D G  P    Y  I+    +  +    ++  + M   G  
Sbjct: 566 DVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCM 625

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y  +I      G LKEA   + ++   GV
Sbjct: 626 PNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 7/170 (4%)

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D +    +I    + GR  +A   +      G  +D+ +YNTL+  YC+ G+L+A
Sbjct: 68  RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDA 127

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L+  M       D YT+T +I GLC  G +  A   L+ M + G   ++  Y  +++
Sbjct: 128 ARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLE 184

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            + K      A+NV + M  K    +  TY+ +++ +C+  R+  A ++L
Sbjct: 185 AVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 234



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 35/209 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
            L+    N+ V  FC+   +E+A  ++   +  G  P+++T+N L+D   +  + +    
Sbjct: 485 PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 544

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ +   G+S D +TY+S++   +R      ++ +L  + +MG+ P V  YN ++  L 
Sbjct: 545 LLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 604

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+A   F  M+               NG   N  T                    
Sbjct: 605 KRCETDQAIDFFAYMVS--------------NGCMPNEST-------------------- 630

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSG 212
            Y ILI+GL   G L+ AR++L EL   G
Sbjct: 631 -YIILIEGLAHEGLLKEARYVLSELYAKG 658



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 17/153 (11%)

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L  A  L++    +G   D Y  T LI  LC+ G    A   L      G   ++ AYN 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 363 IVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR- 420
           +V    + G++D A  +  SM V  D++TY+ ++  LC   R+  A  LL   L+ G + 
Sbjct: 115 LVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQP 174

Query: 421 -------ILKSAQKA--------VVDGLRHSGC 438
                  +L++  K+        V+D +R  GC
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGC 207



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 7/186 (3%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L EA   +E   + G   D+     LI   C+ G+   A  +L   E  G   D + +  
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L+ G C+ G +  AR  +  M       +   Y  I+  L   G++  A+ + + M  + 
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
                 TY+ ++  +CK+     A  +L      G          +++G+   G   +AK
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 444 KIQSKI 449
           +I +++
Sbjct: 232 EILNRL 237


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 211/424 (49%), Gaps = 12/424 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   ++ A  ++ D +  G  PD  TY  LI+ +C+    D    +       G+ P 
Sbjct: 305 YCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPS 364

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V YN+LI G ++  L+  +L L++EM E G  P++W+YN +++ L ++G   +A+ +  
Sbjct: 365 IVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D I     P   T+N +++G CK    D+A  M   +   G  P+++TYN L+ GLCKAG
Sbjct: 425 DAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAG 484

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +      I K + + G  PN ITY  I+    + +K    +++L  MK KG   D   + 
Sbjct: 485 KSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFG 544

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDI----VSYNTLINLYCKEGKLEAAYLLLDE 312
           T+   F KIG +  A     +M     Q D+     +YN +++ + ++  +  A  L   
Sbjct: 545 TLFTGFCKIGDIDGAYQLFRRMEK---QYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSV 601

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M+  G + D YT+ ++IDG CK GNI +G +  LE M K  F  +L  +  +++ L    
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEK-RFIPSLTTFGRVLNCLCVKD 660

Query: 372 KIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           K+  A+ +   M  K        V+ + +A K++ +A K+L+  L     I     + + 
Sbjct: 661 KVHEAVGIIHLMLQKG--IVPETVNTIFEADKKVVAAPKILVEDLLKKGHIAYYTYELLY 718

Query: 431 DGLR 434
           DG+R
Sbjct: 719 DGIR 722



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 16/419 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD---------A 60
            N  V   CK   + ++E ++   ++ GV P++ T+N+ +   C+  + D          
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
               L +M   G  PD +TYNS+I G  +  ++  +  +L + +  G  PD ++Y SL++
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLIN 338

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              + G PD A  VF+D +   L P    +N ++ GL +      AL++   + ++G +P
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            + TYN++I GLCK G +  A  ++ +    G  P+  TY T++    +  K     E++
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +G T D   Y T++    K G+ +E  +  + M   G   +I++YN +++  CK 
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLE 358
            K+  A  LL EM+ +G + D  +   L  G CK G+I GA      M K  +D      
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEK-QYDVCHTTA 577

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
            YN IV    +   ++ A+ +F  M+      D++TY  ++   CK   +    K LL 
Sbjct: 578 TYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLE 636



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 192/397 (48%), Gaps = 13/397 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV  DV TY + I ++C+     A   +L  M E G   + V Y +++AG   +     +
Sbjct: 141 GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHA 200

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L DEML   + PDV ++N L+H L + G   E+ R+   ++   + P   TFNI + G
Sbjct: 201 RELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQG 260

Query: 157 LCKNRYTDNALR---------MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           LC+    D A+R           R +   GF P+ +TYN +I G CK G ++ A  +LK+
Sbjct: 261 LCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKD 320

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
               G  P+  TY +++    ++      + +      KG       Y T+I    + G 
Sbjct: 321 AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGL 380

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           +  A   M +M  +G   +I +YN +IN  CK G +  A  L+D+   +G   D +T+  
Sbjct: 381 ILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNT 440

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           LIDG CK   +  A   +  M   G   ++  YN +++ L K GK +  + +F++ME K 
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
              +  TY+ +V +LCKAK++  A  LL      G++
Sbjct: 501 CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 194/409 (47%), Gaps = 13/409 (3%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +FCK  R   A  ++ +   LG   + V Y  ++         D    + + M    + P
Sbjct: 155 SFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCP 214

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD------ 129
           DVV +N L+    +  L+  S  LL ++L+ G+ P+++++N  +  L + G  D      
Sbjct: 215 DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNS 274

Query: 130 ---EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA    + M+ G   P   T+N +++G CK     +A R+ +     GF P+  TY 
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK G    A  + K+    G  P+ + Y T++K   +       L++++ M   
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + + Y  VI    K+G + +A+  ++  +  G   DI +YNTLI+ YCK+ KL++A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +++ M  QG   D  T+  L++GLCKAG  +      + M + G   N+  YN IVD 
Sbjct: 455 TEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDS 514

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           L K  K++ A+++   M+ K    D  ++ ++    CK   +  A +L 
Sbjct: 515 LCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLF 563



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 204/425 (48%), Gaps = 19/425 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V ++N +++   +F   +  + +  RMR+ G+  DV TY   I    + +    +L L
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  M E+G   +  +Y +++  L+  G+ D A  +F +M+   L P    FN +++ LCK
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL----RTARWI-----LKELGD 210
                 + R+   + K G  P L T+NI ++GLC+ G L    R +R +     L+++ +
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ +TY +I+    +    +    +L     KG+  D F YC++I  F K G    
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A    +  +  G++  IV YNTLI    ++G +  A  L++EM + G   + +T+ ++I+
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLCK G +  A   ++     G   ++  YN ++D   K  K+D A  +   M  +    
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  TY+++++ LCKA +     ++  +  + G          +VD L    C+  AKK+ 
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSL----CK--AKKVN 522

Query: 447 SKIRM 451
             + +
Sbjct: 523 EAVDL 527



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 181/396 (45%), Gaps = 28/396 (7%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA--------TRNSLLSC 95
           TY  ++        F+    +L+ MRE          N+L+ GA         R   +  
Sbjct: 42  TYKCIVQKLGHHGEFEEMEKLLSEMREN-------VNNALLEGAYIEAMKNYGRKGKVQE 94

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++D  + M      P V S+N++M+ L + G  ++A++V+  M    +     T+ I + 
Sbjct: 95  AVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIK 154

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             CK      ALR+ R + + G     V Y  ++ GL  +G    AR +  E+      P
Sbjct: 155 SFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCP 214

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDGF--GYCT--VIAAFVKIG 266
           + + +  ++    +         +L  + ++G     +TF+ F  G C    +   V+  
Sbjct: 215 DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNS 274

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           R+ EA +Y+ +MV  G + D ++YN++I+ YCK+G ++ A  +L +   +GF+ D++T+ 
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            LI+G CK G+   A    +     G   ++  YN ++  L + G I  A+ +   M   
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             + + +TY+ +++ LCK   +  AS L+   +  G
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 48/325 (14%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA   F+ M   +  P   + N ++N L +  Y + A +++  ++  G   ++ TY
Sbjct: 90  GKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTY 149

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I IK  CK  R   A  +L+ + + G   NA+                           
Sbjct: 150 TIRIKSFCKTARPYAALRLLRNMPELGCDSNAV--------------------------- 182

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                    YCTV+A     G    A +  ++M+   +  D+V++N L+++ CK+G +  
Sbjct: 183 --------AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFE 234

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAG----NIKGARL--HLEYMNKI---GFDSN 356
           +  LL ++ K+G   + +T  I + GLC+ G     ++ +R+    EY+ K+   GF+ +
Sbjct: 235 SERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPD 294

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
              YN I+D   K G +  A  V +    K    D FTY S+++  CK      A  +  
Sbjct: 295 DLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFK 354

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSG 437
             L  G+R        ++ GL   G
Sbjct: 355 DGLGKGLRPSIVLYNTLIKGLSQQG 379



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 7/216 (3%)

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGR 267
           + G    A TY  I++    + +++   ++LS M+        +G  Y   +  + + G+
Sbjct: 33  EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEG-AYIEAMKNYGRKGK 91

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           ++EA D  E+M        + S+N ++N+  + G    A+ +   M  +G + D YT+TI
Sbjct: 92  VQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTI 151

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
            I   CK      A   L  M ++G DSN  AY  +V  L   G+ DHA  +F+ M  + 
Sbjct: 152 RIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARC 211

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              D   ++ +VH LCK   +  + +LL   LK GV
Sbjct: 212 LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGV 247


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 218/448 (48%), Gaps = 20/448 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC    ++   +++   I+LG+ P ++T+  LI+  C+   F     + + M 
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV TY ++I G  +    + +  L+ +M E+G  PDV +Y++L+  L +    +
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M    ++P   ++  ++ GLC       A  M   +     +P++VT+++LI
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLI 308

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK----- 244
              CK G +  A+ +LK + + G  PN ITY ++M        Y L +E++ A K     
Sbjct: 309 DIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM------HGYSLQMEVVEARKLFDVM 362

Query: 245 -RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D F Y  +I  +  + R+ EA     +M+  G+  + VSY TLI+ +C+ GKL
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L  +M   G+  D  T+++L++G CK G +  A      M       NL  Y  +
Sbjct: 423 REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTIL 482

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D + K G ++HA  +F  + V     D   Y+++++ LCK   L  A +      + G 
Sbjct: 483 IDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGC 542

Query: 420 RILKSAQKAVVDG-LRHSGCRREAKKIQ 446
              + +   ++ G L+H   + E++ +Q
Sbjct: 543 PPNEFSYNVIIRGFLQH---KDESRAVQ 567



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 201/399 (50%), Gaps = 4/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA    +A  +  D +  G  PDV TY  +I+  C+     A   ++ +M E G  PD
Sbjct: 171 LCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY++LI    ++ L++ +LD+   M   GI P V SY SL+  L    +  EA+ +  
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLN 290

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   ++ P   TF+++++  CK      A  + + + + G  P ++TYN L+ G     
Sbjct: 291 EMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQM 350

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  AR +   +   G  P+  +Y+ ++      ++     ++ + M  +G T +   Y 
Sbjct: 351 EVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYT 410

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I AF ++G+L+EA +  + M T+G   D+ +Y+ L+  +CK+G L  A+ L   M+  
Sbjct: 411 TLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGT 470

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + +   +TILID +CK+GN+  AR     +   G   +++ Y  I++ L K+G +D A
Sbjct: 471 YLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEA 530

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +  F  ME      + F+Y+ ++    + K    A +L+
Sbjct: 531 LEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLI 569



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 162/308 (52%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  +R ++A A++ +   L ++PD+VT+++LID +C+  +      +L  M E G+ P+
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TYNSL+ G +    +  +  L D M+  G  PDV+SY+ L++    + + DEA ++F 
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   LTP T ++  +++  C+      A  +F+ +  +G++P+L TY++L++G CK G
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  + + +  +   PN + YT ++    ++       ++ S +   G   D   Y 
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYT 515

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K G L EA +   +M  DG   +  SYN +I  + +      A  L+ EM  +
Sbjct: 516 TIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575

Query: 317 GFECDKYT 324
           GF  D+ T
Sbjct: 576 GFVADEGT 583



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 5/367 (1%)

Query: 50  DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GI 108
           DA   F + D      N M      P ++ +N L++   R      ++  L + +E+ G+
Sbjct: 63  DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            P+  + N L++C   +   D    V   +I   L P   TF  ++NGLCK      AL 
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  +   G  P++ TY  +I GLCK G    A  ++K++G+ G  P+ +TY+T++    
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           ++R     L+I S MK KG +     Y ++I       R KEA+  + +M +  +  DIV
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +++ LI+++CKEG +  A  +L  M + G E +  T+  L+ G      +  AR   + M
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 404
              G   ++ +Y+ +++      +ID A  +F  M       ++ +Y++++H  C+  +L
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422

Query: 405 PSASKLL 411
             A +L 
Sbjct: 423 REARELF 429



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 67/274 (24%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAIT 219
           R  D+AL  F  +     +P ++ +N L+  + +  +   A   L K++  +G +PN  T
Sbjct: 69  RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
              ++ C    +   LG                    +V+A  +K+G             
Sbjct: 129 LNILINCFCLMQHVDLGF-------------------SVLAKVIKLG------------- 156

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              +Q  I+++ TLIN  CK G+   A  L D+M  +G + D YT+T +I+GLCK G   
Sbjct: 157 ---LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETA 213

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 399
            A   ++ M ++G                                  D  TYS+++ +LC
Sbjct: 214 AAAGLIKKMGEVGCQP-------------------------------DVVTYSTLIDSLC 242

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           K + +  A  +       G+     +  +++ GL
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL 276



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 47/103 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  I + + CK+  L  A  +  +    G+ PDV  Y  +I+  C+    D       +M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
            E G  P+  +YN +I G  ++   S ++ L+ EM + G   D
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 5/174 (2%)

Query: 287 IVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           I+ +N L++   +  +  +A   L  +ME  G   +  T  ILI+  C   ++      L
Sbjct: 90  IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             + K+G    +  +  +++ L K G+   A+ +F+ M  +    D +TY+++++ LCK 
Sbjct: 150 AKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKM 209

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               +A+ L+    + G +        ++D L       EA  I S ++   IS
Sbjct: 210 GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 228/466 (48%), Gaps = 39/466 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  ++++A  ++ +   LG +P+ V YN LID YC+  +      I + M   GISP+ V
Sbjct: 338 KLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSV 397

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T NSLI G  ++  +  + ++L+EM+  G+P +  S++ +++ L    +   A    ++M
Sbjct: 398 TLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREM 457

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +  +L P       +++GLCK      A+ ++  L   GFVP +VT N LI GLCKAG +
Sbjct: 458 LLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNM 517

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFD-- 251
           +    +L+++ + G   + ITY T++  C +  K K G E+   M +KG     YTF+  
Sbjct: 518 QETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLL 577

Query: 252 ----------------------------GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                                        + Y  +I  + K  +++E  + + ++V+  +
Sbjct: 578 LHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKL 637

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +L+ V YN+LI  YC  G + AA+ L D+M+ +G      T++ L+ GLC  G +  A+ 
Sbjct: 638 ELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKH 697

Query: 344 HLEYMNKIGFDSNLEAYNCIV---DRLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLC 399
            L+ M K G   N+  Y  I+    +LG+  K++  +    S  +  + FTY+ M+   C
Sbjct: 698 LLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFC 757

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K  +   A+KLL    + G+        A  +GL   G   EA K+
Sbjct: 758 KLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 208/452 (46%), Gaps = 39/452 (8%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
             L +  +  FCK +R + A  +     +LGV P+VVTYN +I   C+    D  Y    
Sbjct: 256 VHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKE 315

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M +  +SP ++TY+  I G  +   +  +  +L EM E+G  P+   YN+L+    ++G
Sbjct: 316 KMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMG 375

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM----------------- 169
              EA ++  DM+   ++P + T N ++ G CK+     A  +                 
Sbjct: 376 NISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFS 435

Query: 170 ---------FRGLQKHGFVPELVTYNI---------LIKGLCKAGRLRTARWILKELGDS 211
                    FR +    F+ E++  N+         L+ GLCKAG+   A  +   L   
Sbjct: 436 MVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  PN +T   ++    +    +  L++L  M  +G  FD   Y T+I+   K G++KE 
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            +  E+MV  G+Q DI ++N L++  C   K++ A  L  E +K G+  + YT+ ++IDG
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-- 389
            CKA  ++     L  +     + N   YN ++     +G ++ A  + + M+ +     
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS 675

Query: 390 --TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             TYSS++H LC    +  A  LL    K G+
Sbjct: 676 CATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL 707



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 203/428 (47%), Gaps = 45/428 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +  FCK++++ +AE ++ + I  G+  +  +++M+I+  C    F    T L+ +R
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRF---VTALHFIR 455

Query: 70  E--------------------------------------AGISPDVVTYNSLIAGATRNS 91
           E                                       G  P++VT N+LI G  +  
Sbjct: 456 EMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG 515

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +  +L LL +MLE G+  D  +YN+L+    + GK  E   + ++M+   + P   TFN
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFN 575

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           ++L+GLC     D A R++   +K+G+VP + TY ++I G CKA ++     +L EL   
Sbjct: 576 LLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK 635

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               N++ Y ++++    N        +   MK +G       Y +++     IG + +A
Sbjct: 636 KLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDA 695

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +++M  +G+  ++V Y T+I  Y K G++    ++L EM       +K+T+TI+IDG
Sbjct: 696 KHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDG 755

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            CK G  K A   L  M + G   +   YN   + L K+GK++ A  V + M       D
Sbjct: 756 FCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLD 815

Query: 388 SFTYSSMV 395
             TY++++
Sbjct: 816 EITYTTLI 823



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 166/358 (46%), Gaps = 35/358 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LL   V   CKA +  +A  +    +  G +P++VT N LI   C+  +      +L  M
Sbjct: 468 LLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDM 527

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+  D +TYN+LI+G  +   +    +L +EM++ GI PD++++N L+H L    K 
Sbjct: 528 LERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKI 587

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCK----------------------------- 159
           DEA+R++ +       P   T+ +M++G CK                             
Sbjct: 588 DEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSL 647

Query: 160 ------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
                 N   + A R+   ++  G +    TY+ L+ GLC  G +  A+ +L E+   G 
Sbjct: 648 IRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL 707

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN + YTTI+    +  +      +L  M       + F Y  +I  F K+G+ KEA  
Sbjct: 708 LPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAK 767

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            + +M   G+  D V+YN   N  CKEGK+E A+ + DEM       D+ T+T LIDG
Sbjct: 768 LLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 189/386 (48%), Gaps = 4/386 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + T   L+ +  +       Y + + +   GI PDV  ++++I    +      +
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L  +M ++G+ P+V +YN+++H L + G+ DEA R  + M+   ++P   T+++ +NG
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L K    D A  + + + + GFVP  V YN LI G CK G +  A  I  ++   G +PN
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           ++T  ++++   ++ +      +L  M  +G   +   +  VI       R   A  ++ 
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIR 455

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+   ++ +     TL++  CK GK   A  L   +  +GF  +  T   LI GLCKAG
Sbjct: 456 EMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG 515

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           N++     L  M + G   +   YN ++    K+GK+     + E M  K    D +T++
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFN 575

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSG 418
            ++H LC A ++  AS+L   C K+G
Sbjct: 576 LLLHGLCNADKIDEASRLWHECKKNG 601



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 183/383 (47%), Gaps = 9/383 (2%)

Query: 46  NMLIDAY-CQFVSFDAGYT--ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           ++L+  Y  QF     G+   + + + + G+ P + T   L++   + + L  S ++ D 
Sbjct: 187 DLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDF 246

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +   GI PDV  ++++++   +  + D+A  +F  M    + P   T+N +++GLCK+  
Sbjct: 247 ICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGR 306

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D A R    + K    P L+TY++ I GL K  ++  A  +LKE+ + G  PN + Y T
Sbjct: 307 LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNT 366

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +       L+I   M  KG + +     ++I  F K  ++ +A + +E+M+  G
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGA 341
           + ++  S++ +IN  C + +   A   + EM  +    +    T L+ GLCKAG   +  
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV 486

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
            L    + K GF  N+   N ++  L K G +   + +   M     V D  TY++++  
Sbjct: 487 ELWCRLLGK-GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISG 545

Query: 398 LCKAKRLPSASKLLLSCLKSGVR 420
            CK  ++    +L    +K G++
Sbjct: 546 CCKEGKVKEGFELKEEMVKKGIQ 568



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 117/213 (54%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKAN++E+ E ++ + +   +  + V YN LI AYC   + +A + + + M+  G+   
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS 675

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY+SL+ G     L+  +  LLDEM + G+ P+V  Y +++    +LG+ ++ N V Q
Sbjct: 676 CATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQ 735

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   ++ P   T+ IM++G CK   T  A ++   + + G +P+ VTYN    GLCK G
Sbjct: 736 EMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEG 795

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           ++  A  +  E+       + ITYTT++  C +
Sbjct: 796 KVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L++ + N  +  +C    +  A  +  D    GVL    TY+ L+   C     D    
Sbjct: 638 ELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKH 697

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ MR+ G+ P+VV Y ++I G ++   ++    +L EM    I P+ ++Y  ++    
Sbjct: 698 LLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFC 757

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LGK  EA ++  +M    + P   T+N   NGLCK    + A ++   +       + +
Sbjct: 758 KLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEI 817

Query: 184 TYNILIKG 191
           TY  LI G
Sbjct: 818 TYTTLIDG 825



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  + ++A  ++ +    G+LPD VTYN   +  C+    +  + + + M    +  D
Sbjct: 756 FCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLD 815

Query: 77  VVTYNSLIAGATRNS 91
            +TY +LI G  + S
Sbjct: 816 EITYTTLIDGCHQPS 830


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 200/375 (53%)

Query: 28  AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           A+I   +  G  PD+VTY ++++  C+    D  + +LN+M +  + P V+ YN++I G 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
            +   +  +L+L  EM   GI P+V +Y+SL+ CL   G+  +A+R+  DMI   + P  
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            TF+ +++   K      A +++  + K    P +VTY+ LI G C   RL  A+ + + 
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +      P+ +TY T++K   + ++ + G+E+   M ++G   +   Y  +I    + G 
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
              A +  ++MV+DGV  +I++YNTL++  CK GKLE A ++ + +++   E   YT+ I
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
           +I+G+CKAG ++        ++  G   ++ AYN ++    + G  + A  +F+ M+   
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 388 SFTYSSMVHNLCKAK 402
           +   S   + L +A+
Sbjct: 362 TLPNSGCYNTLIRAR 376



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 191/377 (50%), Gaps = 3/377 (0%)

Query: 3   GKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           GKL   +L  N  +   CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +  
Sbjct: 45  GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 104

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L+ M E  I+PDV T+++LI    +   L  +  L DEM++  I P + +Y+SL++
Sbjct: 105 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 164

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                 + DEA ++F+ M+     P   T+N ++ G CK +  +  + +FR + + G V 
Sbjct: 165 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 224

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             VTYNILI+GL +AG    A+ I KE+   G  PN +TY T++    +N K +  + + 
Sbjct: 225 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 284

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             ++R       + Y  +I    K G++++  D    +   GV+ D+V+YNT+I+ +C++
Sbjct: 285 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 344

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G  E A  L  EM++ G   +   +  LI    + G+ + +   ++ M   GF  +    
Sbjct: 345 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 404

Query: 361 NCIVDRLGKDGKIDHAI 377
             + + L  DG++D + 
Sbjct: 405 GLVTNML-HDGRLDKSF 420



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V+ YN +ID  C++   D    +   M   GI P+VVTY+SLI+        S +  L
Sbjct: 49  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 108

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L +M+E  I PDV+++++L+    + GK  EA +++ +M+   + P   T++ ++NG C 
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 168

Query: 160 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +   D A +MF  +  KH F P++VTYN LIKG CK  R+     + +E+   G   N +
Sbjct: 169 HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 227

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY  +++  F+     +  EI   M   G   +   Y T++    K G+L++A    E +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
               ++  I +YN +I   CK GK+E  + L   +  +G + D   +  +I G C+ G+ 
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           + A    + M + G   N   YN ++    +DG  + +  + + M
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 178/356 (50%), Gaps = 4/356 (1%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L+D M+  G  PD+ +Y  +++ L + G  D A  +   M  G L P    +N +++GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K ++ D+AL +F+ ++  G  P +VTY+ LI  LC  GR   A  +L ++ +    P+  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T++ ++    +  K     ++   M ++        Y ++I  F    RL EA    E M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V+     D+V+YNTLI  +CK  ++E    +  EM ++G   +  T+ ILI GL +AG+ 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 394
             A+   + M   G   N+  YN ++D L K+GK++ A+ VFE ++        +TY+ M
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  +CKA ++     L  +    GV+    A   ++ G    G + EA  +  +++
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 114/231 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  R+E+   +  +  + G++ + VTYN+LI    Q    D    I   M  
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+++TYN+L+ G  +N  L  ++ + + +    + P +++YN ++  + + GK ++
Sbjct: 255 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 314

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F ++    + P    +N M++G C+    + A  +F+ +++ G +P    YN LI+
Sbjct: 315 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 374

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  ++KE+   G A +A T   +       R  K  L++LS
Sbjct: 375 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 425



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 6/180 (3%)

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           + ++  M  KG   D   Y  V+    K G    A + + +M    ++  ++ YNT+I+ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK   ++ A  L  EME +G   +  T++ LI  LC  G    A   L  M +   + +
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLL 411
           +  ++ ++D   K+GK+  A  +++ M VK S      TYSS+++  C   RL  A ++ 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 220/450 (48%), Gaps = 9/450 (2%)

Query: 11  NICVCTFCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           NI +   C  NR ++A  ++    D    G  PDVV+Y  +I+ + +    D  Y+  + 
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + GI PDVVTYNS+IA   +   +  ++++L+ M++ G+ PD  +YNS++H     G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
           P EA    + M    + P   T++++++ LCKN     A ++F  + K G  PE+ TY  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L++G    G L     +L  +  +G  P+   ++ ++    +  K    + + S M+++G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y  VI    K GR+++A  Y EQM+ +G+    + YN+LI+  C   K E A 
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+ EM  +G   +      +ID  CK G +  +    E M +IG   N+  YN +++  
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521

Query: 368 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              GK+D A+ +   M       ++ TYS++++  CK  R+  A  L      SGV    
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
                ++ GL  +  RR A   +  +R+ +
Sbjct: 582 ITYNIILQGLFQT--RRTAAAKELYVRITE 609



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 214/439 (48%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA  ++   ++ GV+PD +TYN ++  YC           L +MR 
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTY+ L+    +N     +  + D M + G+ P++ +Y +L+      G   E
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   + P    F+I++    K    D A+ +F  +++ G  P  VTY  +I 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+GR+  A    +++ D G +P  I Y +++       K++   E++  M  +G   
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + ++I +  K GR+ E+    E MV  GV+ ++++YNTLIN YC  GK++ A  LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M   G + +  T++ LI+G CK   ++ A +  + M   G   ++  YN I+  L + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 371 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +   A    + + ES    +  TY+ ++H LCK K    A ++  +     +++     
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++D L   G   EAK +
Sbjct: 655 NIMIDALLKVGRNDEAKDL 673



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 219/438 (50%), Gaps = 8/438 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + I+ G   D + +  L+   C    + DA   +L RM E G  P+
Sbjct: 98  CRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPN 157

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +YN L+ G    +    +L+LL  M +    G PPDV SY ++++  F+ G  D+A  
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   + P   T+N ++  LCK +  D A+ +   + K+G +P+ +TYN ++ G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G+ + A   LK++   G  P+ +TY+ +M    +N +     +I  +M ++G   +  
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++  +   G L E    ++ MV +G+  D   ++ LI  Y K+GK++ A L+  +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +QG   +  T+  +I  LCK+G ++ A L+ E M   G       YN ++  L    K 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A  +   M  +    ++  ++S++ + CK  R+  + KL    ++ GV+        +
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 430 VDGLRHSGCRREAKKIQS 447
           ++G   +G   EA K+ S
Sbjct: 518 INGYCLAGKMDEAMKLLS 535



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 196/419 (46%), Gaps = 13/419 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PD+ TY +LI   C+    D G+  L  + + G   D + +  L+ G   +   S ++
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIM 153
           D+ L  M E+G  P+V+SYN L+  L    +  EA  +   M     G   P   ++  +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NG  K   +D A   +  +   G +P++VTYN +I  LCKA  +  A  +L  +  +G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY +I+     + + K  +  L  M+  G   D   Y  ++    K GR  EA  
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   D Y  +ILI    
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
           K G +  A L    M + G + N   Y  ++  L K G+++ A+  FE M        + 
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            Y+S++H LC   +   A +L+L  L  G+ +      +++D    S C +E + I+S+
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID----SHC-KEGRVIESE 496



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  + + CK  R+ ++E +    +R+GV P+V+TYN LI+ YC     D    +
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M   G+ P+ VTY++LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN+ TD+AL+MF+ L       E  T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +      +G  PN  TY  + +        +   ++  +M+
Sbjct: 654 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D      ++   ++ G +  A  Y+  +      L+  + +  I+L    GK +
Sbjct: 714 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQ 772

Query: 305 AAYLLLDEMEKQGFE 319
             Y  L E  K   E
Sbjct: 773 EYYRFLPEKYKSFIE 787



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 190/410 (46%), Gaps = 43/410 (10%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ PD   +++LI AY +    D    + ++MR+ G++P+ VTY ++I    ++  +
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++ G+ P    YNSL+H L    K + A  +  +M+   +   T  FN +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P ++TYN LI G C AG++  A  +L  +   G 
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY+T++                             GYC       KI R+++A  
Sbjct: 543 KPNTVTYSTLIN----------------------------GYC-------KISRMEDALV 567

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K   +    L + + N    D  LEA  +N ++D L K G+ D A ++F +      V +
Sbjct: 628 K-NKLTDDALQM-FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +TY  M  N+     L    +L LS   +G  +       +V  L   G
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 200/431 (46%), Gaps = 20/431 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C + K  ++++A  +     + G+ P+ VTY  +I   C+    +       +M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+SP  + YNSLI G    +    + +L+ EML+ GI  +   +NS++    + G+ 
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F+ M+   + P   T+N ++NG C     D A+++  G+   G  P  VTY+ L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + KE+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     +A    + +    ++L+  ++N +I+   K G+ + A  
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L       G   + +T+ ++      A NI G  L LE ++++    ++E   C VD   
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM------AENIIGQGL-LEELDQLFL--SMEDNGCTVD--- 720

Query: 369 KDGKIDHAI-NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-----VRIL 422
             G ++  +  + +  E+  + TY SM+     +    +AS L +  L  G      R L
Sbjct: 721 -SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS-LFIDLLSGGKYQEYYRFL 778

Query: 423 KSAQKAVVDGL 433
               K+ ++ L
Sbjct: 779 PEKYKSFIESL 789



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 12/332 (3%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
           + DE+L  G    ++  N  +  + +       +R  +    G  ++TP   T+ I++  
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
            C+    D        + K GF  + + +  L+KGLC   R   A   +L+ + + G  P
Sbjct: 97  CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           N  +Y  ++K  C  NR  +  LE+L  M   +  G   D   Y TVI  F K G   +A
Sbjct: 157 NVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                +M+  G+  D+V+YN++I   CK   ++ A  +L+ M K G   D  T+  ++ G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            C +G  K A   L+ M   G + ++  Y+ ++D L K+G+   A  +F+SM  +    +
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             TY +++        L     LL   +++G+
Sbjct: 336 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 35/240 (14%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TY  ++ CC R  +  LG   L  + +KG+  D   +  ++       R  +A D 
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 330
           + + +T+ G   ++ SYN L+   C E + + A  LL  M      G   D  ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G  K G+                D     Y+ ++DR                  + D  T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR----------------GILPDVVT 233

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y+S++  LCKA+ +  A ++L + +K+GV        +++ G   SG  +EA     K+R
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 220/437 (50%), Gaps = 9/437 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISP 75
           FCKAN+L++A A   + +R  V P+  TYN++++  C+       Y +L  MR+   ++P
Sbjct: 17  FCKANQLKQALACF-EKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAP 75

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           D+VTY+++I G  +   +  + ++L EM+   GI PDV +Y S++  L + GK D A  +
Sbjct: 76  DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM 135

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLC 193
            ++M    + P   TF+ ++ G C  R  D AL++++  L    + P++VTY  LI G C
Sbjct: 136 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFC 195

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+G L  A  +L  +      PN +TY++++    +       L++   M  KG   +  
Sbjct: 196 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 255

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I       ++  A   M++M       D VSYN L++ YC+ G++E A  L  EM
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLEAYNCIVDRLGKDGK 372
             +    D+ T+T L+ G C A  ++ AR  LE M    G D ++  Y+ +V    +  +
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
              A    + M  +    ++ TYSS++  LCKA R+  A ++L + +   V        +
Sbjct: 376 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNS 435

Query: 429 VVDGLRHSGCRREAKKI 445
           V+  L   G   EA K+
Sbjct: 436 VIGALCRLGDMDEAWKL 452



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 226/445 (50%), Gaps = 10/445 (2%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFD 59
           F   + R  N+ V   CKA    KA  ++ + +R G  V PD+VTY+ +I+ +C+    D
Sbjct: 36  FVAPNERTYNVVVNGLCKARLTSKAYEVLKE-MRDGKSVAPDLVTYSTVINGFCKQGEMD 94

Query: 60  AGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
               IL  M    GI+PDVVTY S++ G  R+  +  + +++ EM   G+ PD +++++L
Sbjct: 95  RACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154

Query: 119 MHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           +       K DEA +++++++      P   T+  +++G CK+   + A++M   ++   
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP +VTY+ L+ GLCKAG L  A  + + +   G  PN +TYTT++       K     
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M       D   Y  ++  + ++GR++EA    ++M T     D ++Y  L+  +
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334

Query: 298 CKEGKLEAAYLLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           C   +LE A  LL+ M+   G + D  T++I++ G  +A     A   ++ M       N
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLL 412
              Y+ ++D L K G++DHA+ V ++M    V+ S  T++S++  LC+   +  A KLL+
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSG 437
           +    G+         +++G   +G
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTG 479



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 196/392 (50%), Gaps = 12/392 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVVTY  LID +C+  + +    +L  M      P+VVTY+SL+ G  +   L  +LDL
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M   G  P+V +Y +L+H L    K D A  +  +M      P T ++N +L+G C+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAI 218
               + A ++F+ +     +P+ +TY  L++G C A RL  AR++L+ +   +G  P+ +
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+ ++    R +++    E +  M  +    +   Y ++I    K GR+  A + ++ M
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V   V+  + ++N++I   C+ G ++ A+ LL  M   G E    T+T L++G  + G +
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 481

Query: 339 KGARLHLEYMN----KIGFDSNL---EAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTY 391
           + A    E M     K    +NL   +A++ ++  L K  +ID A+ V E +  ++    
Sbjct: 482 EIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPA 541

Query: 392 S----SMVHNLCKAKRLPSASKLLLSCLKSGV 419
                ++V  L +A R   A KL+ S  K G+
Sbjct: 542 EEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 225/485 (46%), Gaps = 55/485 (11%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FCK   +++A  I+ + + R G+ PDVVTY  ++D  C+    D    ++  M+  G+ P
Sbjct: 87  FCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 146

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           D  T+++LI G      +  +L L  E+L      PDV +Y +L+    + G  ++A ++
Sbjct: 147 DKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKM 206

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
              M      P   T++ +L+GLCK    D AL +FR +   G VP +VTY  LI GLC 
Sbjct: 207 LGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCA 266

Query: 195 A-----------------------------------GRLRTARWILKELGDSGHAPNAIT 219
           A                                   GR+  A+ + KE+      P+ IT
Sbjct: 267 AHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRIT 326

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           YT +++      + +    +L  MK   G   D   Y  V+A + +  R  EA +++++M
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 386

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   V  + V+Y++LI+  CK G+++ A  +L  M  +  E    T   +I  LC+ G++
Sbjct: 387 IARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDM 446

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF--------- 389
             A   L  M   G +  +  Y  +++   + G+++ A  +FE M  K            
Sbjct: 447 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVP 506

Query: 390 --TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK---AVVDGLRHSGCRREAKK 444
              +S+++  LCKA+ +  A  ++   L+S  R  + A++   A+VDGL  +G   EA K
Sbjct: 507 EQAFSALIRGLCKAREIDKAMAVVEE-LRS--RECEPAEEDCLAIVDGLLRAGRTEEAGK 563

Query: 445 IQSKI 449
           + + I
Sbjct: 564 LINSI 568



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 128/239 (53%), Gaps = 8/239 (3%)

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P +VT+ I+I G CKA +L+ A    +++ +   APN  TY  ++    + R      E+
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 240 LSAMKR-KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLY 297
           L  M+  K    D   Y TVI  F K G +  A + + +MVT DG+  D+V+Y ++++  
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSN 356
           C++GK++ A  ++ EM+ +G E DK+T + LI G C A  +  A +L+ E +    +  +
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +  Y  ++D   K G ++ A+ +   ME    V +  TYSS++H LCKA  L  A  L 
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGAR 342
           Q  +V++  +I+ +CK  +L+ A    ++M ++    ++ T+ ++++GLCKA    K   
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHN 397
           +  E  +      +L  Y+ +++   K G++D A  +   M  +D       TY+S+V  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           LC+  ++  A +++      GV   K    A++ G  ++    EA K+  +I
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +   CK  ++++A  +     +  + PD  TY  LI  +C+    D  + 
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFE 253

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + +RM + G +P+ VTY++LI G      +  ++D+L+EM E GI P V++Y   +  L 
Sbjct: 254 VFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC 313

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            +G+ D+A  + + M     +P   T+  +++GL +    + A+ M+  + K G VP  V
Sbjct: 314 DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTV 373

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI  LC  GR   A  I   +   G   NA TY  I+K  F     +  + + + M
Sbjct: 374 TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            + G +     Y T+I   +K G L  AT ++  M     + D  +Y  LI+ +CK GKL
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           ++A     EM K G   +++T+T +IDG CK G I  A    E M + G  +++E YN I
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           +  L K  +   A      M  +    ++ TY+S+++ LCK
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 8/444 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +    K + +  A+ +       GV P ++T+N +I+  C+         + N++ 
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +  + PD  TY SLI G  RN  L  + ++ D M++ G  P+  +Y++L++ L   G+  
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + ++M    + P   T+ + ++ LC     D+A+ + R + K G  P + TY  +I
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL +AG++  A  +  ++   G  PN +TY  ++       ++ + L+I   M+  G  
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I     +  +++A     +M+ DG    +V+YNTLI    K G L  A   
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRF 464

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M++   E D+ T+  LI G CK G +  A      M K G   N   Y  ++D   K
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524

Query: 370 DGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +GKID A+++FE ME         TY++++  L K  R   A K      + G++     
Sbjct: 525 EGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTIT 584

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
             ++++GL    C+  A  +  KI
Sbjct: 585 YTSLINGL----CKNTATNLAFKI 604



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 178/375 (47%), Gaps = 4/375 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + + + C   R++ A  ++    + G  P V TY  +I    +    +    + ++M + 
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ P+ VTYN+LI           +L + D M   G   +  +YN ++  LF +   ++A
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA 426

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             VF  M+    +P   T+N ++    K  Y +NA R    +++    P+  TY  LI G
Sbjct: 427 MVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISG 486

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CK G+L +A     E+   G +PN  TYT ++    +  K  + L +   M+  G +  
Sbjct: 487 FCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I+   K  R  EA  +  +M   G+Q + ++Y +LIN  CK      A+ +  
Sbjct: 547 IETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFH 606

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EMEK+    + +T+T LI GLC+ G +  A    E + + G +  ++ Y+ +V  L ++G
Sbjct: 607 EMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREG 662

Query: 372 KIDHAINVFESMEVK 386
           + + A  + E+M+ K
Sbjct: 663 RSNEASQLVENMKEK 677



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 174/358 (48%), Gaps = 4/358 (1%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           ++N+L+    +  +++ + ++  ++   G+ P + ++N++++ L + GK  EA  VF  +
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
              DL P   T+  ++ G C+NR  D A  +F  + K G  P  VTY+ LI GLC  GR+
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L+E+ + G  P   TYT  +       +    + ++ +M +KG +     Y  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+   + G+++ A     +M+ +G+  + V+YN LIN  C EG+   A  + D ME  G 
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T+  +I GL    +I+ A +    M K G    +  YN ++    K G +++A  
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 379 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
                 ES    D  TY  ++   CK  +L SA+      LK G+   +    A++DG
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 4/325 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L+ A +   + ++ G+ P+  TY  +ID YC+    D   ++  RM E G S  
Sbjct: 487 FCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN++I+G ++ +  S +     +M E G+ P+  +Y SL++ L +    + A ++F 
Sbjct: 547 IETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFH 606

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   +  P   T+  ++ GLC+    D A R    L ++G  P + TY+ L+ GLC+ G
Sbjct: 607 EMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREG 662

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +++ + + G +P+   Y +++    ++ K    LEI + M  KG+    F Y 
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A   + R +EA +  + ++      D++ +  L++   +EG  +     L  ME +
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA 341
                 +T+ IL   L K G   G 
Sbjct: 783 NCTPSLHTYIILARELSKVGKSIGT 807



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 31/382 (8%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G L +  TYN +I         +    + N+M + G SP VVTYN+LI    +   L+ +
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              L  M E    PD  +Y  L+    + GK D A   F +M+   ++P   T+  M++G
Sbjct: 462 TRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDG 521

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    D AL +F  ++++G    + TYN +I GL K  R   A     ++ + G  PN
Sbjct: 522 YCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPN 581

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKG-------YTFDGFGYC------------- 256
            ITYT+++    +N    L  +I   M++K        YT   +G C             
Sbjct: 582 TITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE 641

Query: 257 -----------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                      T+++   + GR  EA+  +E M   G+   +  Y +L+  +CK  K++ 
Sbjct: 642 NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDC 701

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  + + M  +GF+   + + +LI  LC     + A    + + K  ++S+L  +  +VD
Sbjct: 702 ALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761

Query: 366 RLGKDGKIDHAINVFESMEVKD 387
            L ++G  D  +     ME ++
Sbjct: 762 GLLQEGDSDLCMKFLYLMESRN 783



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 4/333 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD  TY  LI  +C+    D+  +    M + GISP+  TY ++I G  +   +  +L L
Sbjct: 475 PDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            + M E G    + +YN+++  L +  +  EA +    M    L P T T+  ++NGLCK
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N  T+ A ++F  ++K   +P   TY  LI GLC+ G++  A    + L ++G  P   T
Sbjct: 595 NTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDT 650

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R  +     +++  MK KG +     YC+++ A  K  ++  A +    M 
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMA 710

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G Q  +  Y  LI   C   + E A  +   + K+ +  D    T+L+DGL + G+  
Sbjct: 711 VKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSD 770

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
                L  M       +L  Y  +   L K GK
Sbjct: 771 LCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 4/262 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    N  +    K NR  +AE         G+ P+ +TY  LI+  C+  + +  + I 
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M +    P+  TY SLI G  +       +D  + + E G  P + +Y++L+  L + 
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEG----KVDAAERLTENGCEPTIDTYSTLVSGLCRE 661

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EA+++ ++M    L+P    +  +L   CK+   D AL +F  +   GF P L  Y
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIY 721

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            +LI  LC   R   A  I + L       + I +T ++    +     L ++ L  M+ 
Sbjct: 722 KVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMES 781

Query: 246 KGYTFDGFGYCTVIAAFVKIGR 267
           +  T     Y  +     K+G+
Sbjct: 782 RNCTPSLHTYIILARELSKVGK 803



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           + F  + + T++    K   +  A +   Q+ + GV+  ++++NT+IN+ CK+GK++ A 
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L+ +++ +     D +T+T LI G C+   +  A    + M K G + N   Y+ +++ L
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
             +G+I  A+++ E M  K      +TY+  + +LC   R+  A  L+ S  K G     
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 424 SAQKAVVDGLRHSG 437
               A++ GL  +G
Sbjct: 338 QTYTAIISGLFRAG 351


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 226/450 (50%), Gaps = 4/450 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI V ++CK+   +KA+ +I +  +  V PDVVT+N+LIDA  +    DA   +++ M 
Sbjct: 160 LNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P +VT+NS++ G  ++     + ++   M +  + PDV S+N L+    ++G+ +
Sbjct: 220 NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVE 279

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA + +++M    +TP   +F+ ++         D+A    R ++  G VP+ V Y ++I
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+AG +  A  +  E+   G  P+ +TY T++    +  +     E+L+ MK +G T
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   + T+I  + + G  ++A    + ++   ++ D+V+YN+LI+  C++G L  A  L
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D+M  +    +  T++ILID  C+ G ++ A   L+ M   G   N+  YN I+    +
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCR 519

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +       + M     + D  T+++++H   K + +  A  +     K  V+     
Sbjct: 520 SGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVT 579

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              +++G    G   EA ++  K+  + I 
Sbjct: 580 YNMIINGFSEQGNMEEAGRVFKKMGASGIE 609



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 191/380 (50%), Gaps = 8/380 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +  FC+   +E+A     +  + GV PDVV+++ LI  +      D     L  
Sbjct: 263 RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLRE 322

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G+ PD V Y  +I G  R   +S +L + DEM+ +G  PDV +YN+L++ L +  +
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A  +  +M    +TP   TF  +++G C++   + AL++F  L      P++V YN 
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHA----PNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           LI G+C+ G L  A     EL D  HA    PN +TY+ ++       + +     L  M
Sbjct: 443 LIDGMCRKGDLAKA----NELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEM 498

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   +   Y ++I  + + G +K+   ++++M+ D +  D++++NTLI+ Y KE  +
Sbjct: 499 VSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENM 558

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A+ + + MEK+  + D  T+ ++I+G  + GN++ A    + M   G + +   Y  +
Sbjct: 559 HGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSL 618

Query: 364 VDRLGKDGKIDHAINVFESM 383
           ++     G    A  + + M
Sbjct: 619 INGHVTAGNSKEAFQLHDEM 638



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 189/380 (49%), Gaps = 4/380 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T N+++ +YC+ + FD   T+++ M +  + PDVVT+N LI    R   +  ++ L+D M
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G+ P + ++NS++  L +  + D+A  VF+ M    + P   +FNI++ G C+    
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A++ ++ +Q+ G  P++V+++ LI      G++  A   L+E+   G  P+ + YT +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    R       L +   M   G   D   Y T++    K  RL +A + + +M   GV
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+ ++ TLI+ YC++G  E A  L D +  Q    D   +  LIDG+C+ G++  A  
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLC 399
             + M+      N   Y+ ++D   + G+++ A    + M  K +     TY+S++   C
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518

Query: 400 KAKRLPSASKLLLSCLKSGV 419
           ++  +    + L   ++  +
Sbjct: 519 RSGNVKKGQQFLQKMMQDNI 538



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 164/313 (52%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  + +  FC+A  + +A  +  + + LG LPDVVTYN L++  C+         +LN M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +E G++PD+ T+ +LI G  R+     +L L D +L   + PDV +YNSL+  + + G  
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +AN ++ DM   ++ P   T++I+++  C+    + A      +   G +P ++TYN +
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           IKG C++G ++  +  L+++      P+ IT+ T++    +         + + M+++  
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  F + G ++EA    ++M   G++ D  +Y +LIN +   G  + A+ 
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633

Query: 309 LLDEMEKQGFECD 321
           L DEM  +GF  D
Sbjct: 634 LHDEMMHRGFAPD 646



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 193/395 (48%), Gaps = 4/395 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I++ +  +  +P    ++ LI   T++     + +    +L+  +P    + N+L+  L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G P  A   ++ ++  D      T NIM++  CK+   D A  +   ++K    P++V
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+LI    +AG +  A  ++  + + G  P  +T+ +++K   ++R++    E+  AM
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            +     D   +  +I  F ++G ++EA  + ++M   GV  D+VS++ LI L+   GK+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A   L EM+  G   D   +T++I G C+AG++  A    + M  +G   ++  YN +
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K  ++  A  +   M+ +    D  T+++++H  C+      A +L  + L   +
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           R    A  +++DG+   G   +A ++   +   +I
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 210/412 (50%), Gaps = 10/412 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C  NRL +  A     +R G  P++VTYN LI   C          +  RM+
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML------EMGIPPDVWSYNSLMHCLF 123
           + G +PDVVTY +LI G      ++ +L L  EML      E+   P+V +YN ++  L 
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+ DEA ++F++M    + P   ++N +++G C     + + R+   +   G  P++V
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMV 286

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+LI  LCK G++  A+ +L  + +SG  P+ +TY ++++            E+  +M
Sbjct: 287 TFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 346

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D   Y  +I  + K  +++EA     +M+  G + ++++Y++L+      GK+
Sbjct: 347 PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L   M+  G   + YT+ I +DGLCK   +  A      +    F   +E  NC+
Sbjct: 407 DDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +D L K GK++ A  +FE +  +    +  TY+ M+H  C+  ++  A+ L+
Sbjct: 467 IDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 177/348 (50%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V+TYN+++D  C+    D    +   M+  G+ P +++YNSLI G         S  L
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEML+ G+ PD+ ++N L+  L + GK  EA ++   MI   + P   T+N ++ G C 
Sbjct: 273 LDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 332

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               ++A  +F  +   G  P++++YN+LI G  K  ++  A  +  E+   G  PN IT
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++K  F   K     ++ S MK  G   + + Y   +    K   L EA     ++ 
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           +   +L+I + N LI+  CK GKLE A+ L +++  +G E +  T+TI+I G C+ G + 
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
            A + ++ M   G   ++  YN ++    +  K++  + +   M  KD
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 167/325 (51%), Gaps = 35/325 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ + T CK  ++ +A+ ++   I  G++PD+VTYN LI+ +C     ++   +   M 
Sbjct: 288 FNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP 347

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV++YN LI G ++   +  ++ L +EML +G  P+V +Y+SL+  +F  GK D
Sbjct: 348 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 407

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++F  M    +   + T+ I L+GLCKN     A+++F  L+   F  E+   N LI
Sbjct: 408 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 467

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCKAG+L TA  + ++L + GH PN +TYT +                          
Sbjct: 468 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM-------------------------- 501

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                    I  F + G++ +A   +++M  +G   DI++YNTL+  + +  KLE    L
Sbjct: 502 ---------IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 552

Query: 310 LDEMEKQGFECDKYTHTILIDGLCK 334
           L  M ++    D  T +I++D L K
Sbjct: 553 LHRMAQKDVSPDAITCSIVVDMLSK 577



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 189/376 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   CK  R ++A+ +  +    G++P +++YN LI  +C    ++    +L+ M +
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLD 278

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+VT+N LI    +   +  +  LL  M+E GI PD+ +YNSL+     +G  + 
Sbjct: 279 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 338

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M      P   ++N+++NG  K    + A++++  +   G  P ++TY+ L+K
Sbjct: 339 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK 398

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G+  AG++  A+ +   +   G A N+ TY   +    +N      +++ + +K   +  
Sbjct: 399 GIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKL 458

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +      +I    K G+L+ A +  E++  +G + ++V+Y  +I+ +C+EG+++ A +L+
Sbjct: 459 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +ME  G   D  T+  L+ G  ++  ++     L  M +     +    + +VD L KD
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKD 578

Query: 371 GKIDHAINVFESMEVK 386
            K    +++     ++
Sbjct: 579 EKYQECLHLLPRFPIQ 594



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 189/393 (48%), Gaps = 10/393 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M  +  +P + ++N L++G  +    S    L ++M   G+  D  + N L++CL  + +
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E    F  ++    +P   T+N ++ GLC       A R+F  +QK G  P++VTY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 188 LIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIMKCCFRNRKYKLGLEILS 241
           LIKGLC  G +  A  + +E L D         PN ITY  I+    +  +     ++  
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            MK +G       Y ++I  F   G+ +E+   +++M+  G+Q D+V++N LI+  CKEG
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+  A  LL  M + G   D  T+  LI+G C  G++  AR     M   G + ++ +YN
Sbjct: 300 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 359

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++   K  K++ A+ ++  M    +  +  TY S++  +  A ++  A KL       
Sbjct: 360 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           G+          +DGL  + C  EA K+ ++++
Sbjct: 420 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 10/378 (2%)

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           T N   + +L     M+     P + S+N L+  L ++    +   ++  M    L+   
Sbjct: 45  TGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T NI+LN LC           F G+ + G+ P +VTYN LIKGLC   R+  A  +   
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164

Query: 208 LGDSGHAPNAITYTTIMK-CCFR---NRKYKLGLEILSAMKRKGYT--FDGFGYCTVIAA 261
           +   G  P+ +TY T++K  C     N   KL  E+L+ + R       +   Y  ++  
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             K+GR  EA    E+M T G+   I+SYN+LI+ +C  GK E +  LLDEM  QG + D
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T  +LID LCK G +  A+  L  M + G   +L  YN +++     G ++ A  +F 
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           SM  K    D  +Y+ +++   K  ++  A KL    L  G R       +++ G+  +G
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404

Query: 438 CRREAKKIQSKIRMAKIS 455
              +AKK+ S ++   I+
Sbjct: 405 KVDDAKKLFSVMKAHGIA 422



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL    LN  +   CKA +LE A  +       G  P+VVTY ++I  +C+    D    
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
           ++ +M   G +PD++TYN+L+ G   ++ L   + LL  M +  + PD
Sbjct: 517 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 206/430 (47%), Gaps = 40/430 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA R+  A  I       G+ P+ V Y+ LI   C+    D    +L +M++A  +PD +
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF-QD 137
           TYN LI G  ++  +  +    DEMLE G  PDV++YN L+    + G  D A+    Q+
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
                 T    T+  +++ L KN+  + A+ +   +  +G  P + TYN L+ GLCK GR
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L  A  +L+++ D+G  P+ +TYT+++    + ++     ++   M  +G   D   Y  
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 377

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I   ++ G++ +A+   + M + G   D+V+ +T+I+   K G++ AA  +   ME +G
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437

Query: 318 F--------------------EC---------------DKYTHTILIDGLCKAGNIKGAR 342
                                +C               D  T+ ILIDGLCK+G+++ AR
Sbjct: 438 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
              + M + G   ++  YN ++    K G  D A  VF+ M       +  TY +++  L
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGL 557

Query: 399 CKAKRLPSAS 408
           CK ++L  AS
Sbjct: 558 CKRRQLTKAS 567



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 219/462 (47%), Gaps = 42/462 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISP 75
            CK  RLE+A  ++   +  G  PDVVTY  LID    +  SF+A Y +   M   G++ 
Sbjct: 31  LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA-YKLFKEMALRGLAL 89

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D V Y +LI    +   +  +  +   M   G  PDV + ++++  L + G+   A R+F
Sbjct: 90  DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 149

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M    L P    ++ +++GLCK R  D AL M   ++K    P+ +TYN+LI GLCK+
Sbjct: 150 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKS 209

Query: 196 GRLRTARWILKELGDSGHAPNAITY-----------------------TTIMKCCF---- 228
           G +  AR    E+ ++G  P+  TY                       TTI  C      
Sbjct: 210 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHT 269

Query: 229 ---------RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
                    +N+K +  + ++  +   G T     Y  ++    K+GRL+EA D + ++V
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G   D+V+Y +LI+   KE +   AY L  EM  +G   D   +T LI  L + G I 
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A    + M   G   ++   + ++D L K G+I  A+ +F+SME +    +   YS+++
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           H LCKA+++  A ++L    K+           ++DGL  SG
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 491



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 184/378 (48%), Gaps = 36/378 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG--------- 61
           N+ +   CK+  +E A A   + +  G  PDV TYN+LI  +C+  + DA          
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259

Query: 62  ----------YT-----------------ILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
                     YT                 ++ ++   G +P + TYN+L+ G  +   L 
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++DLL ++++ G  PDV +Y SL+  L +  +  EA ++F++M    L   T  +  ++
Sbjct: 320 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 379

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             L +      A  +++ +  HG VP++VT + +I GL KAGR+  A  I K +   G A
Sbjct: 380 RELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN + Y+ ++    + RK    LE+L+ MK+   T D   Y  +I    K G ++ A  +
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 499

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M+  G + D+ +YN LI+ +CK G  +AA  + D+M       +  T+  LI GLCK
Sbjct: 500 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559

Query: 335 AGNIKGARLHLEYMNKIG 352
              +  A L+ ++M + G
Sbjct: 560 RRQLTKASLYFQHMKERG 577



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 197/393 (50%), Gaps = 5/393 (1%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
            +    ++ ++   G +P + TYN+L+ G  +   L  ++DLL ++++ G  PDV +Y S
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L+  L +  +  EA ++F++M    L   T  +  ++  L +      A  +++ +  HG
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP++VT + +I GL KAGR+  A  I K +   G APN + Y+ ++    + RK    L
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           E+L+ MK+   T D   Y  +I    K G ++ A  + ++M+  G + D+ +YN LI+ +
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 298 CKEGKLEAA-YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           CK G  +AA + L  E    G   D +T+T ++D L K   I+ A   +E +   G    
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           +  YN +++ L K G+++ AI++   +       D  TY+S++  L K KR   A KL  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
                G+ +      A++  L  +G   +A  +
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSV 394



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 155/359 (43%), Gaps = 40/359 (11%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EA  + + +     TP  AT+N +LNGLCK    + A+ + R +  +G  P++VTY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL K  R   A  + KE+   G A + + YT +++   +  K      +   M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV----------------------- 283
           G   D     T+I    K GR+  A    + M   G+                       
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 284 ------------QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                         D ++YN LI+  CK G +EAA    DEM + G + D YT+ ILI G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 332 LCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF- 389
            CKAGN   A   L     I G   ++  Y  IVD L K+ KI+ A+ + E +       
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 390 ---TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              TY+++++ LCK  RL  A  LL   + +G         +++DGL       EA K+
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 225/445 (50%), Gaps = 4/445 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CKA  +E A  +       G+ P+V+T N++ID  C+    D   +I   M  
Sbjct: 411 NVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNH 470

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SPD VT+ SLI G  +   +  +  L ++ML+    P+   Y SL+   F+ G+ ++
Sbjct: 471 KICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKED 530

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            +++F++MI    +P     N  ++ + K   T     +F  ++  GF+P++++Y+ILI 
Sbjct: 531 GHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIH 590

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG  R    +   + + G   +   Y T +    ++ K     ++L  MK KG   
Sbjct: 591 GLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQP 650

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +VI    KI RL EA    E+  ++G++L++V Y++LI+ + K G+++ AYL++
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIM 710

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ ++G   + YT   L+D L KA  I  A +  + M  +    N   Y+ +++ L + 
Sbjct: 711 EELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRV 770

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            K + A   ++ M+ +    ++ TY++M+  L KA  +  AS L      +G     ++ 
Sbjct: 771 RKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASY 830

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRM 451
            A+++GL +S    EA KI  + RM
Sbjct: 831 NAIIEGLSYSRRAMEAYKIFEETRM 855



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 220/511 (43%), Gaps = 75/511 (14%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK NRL++A  I     +   +P    YN +I  Y     FD  Y++L R +  G 
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V+ YN ++    +   L  +L   +EM +    P++ +YN L+  L + G+ + A +
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M    L P   T NIM++ LCK +  D A  +F G+      P+ VT+  LI GL 
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLG 488

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK---------------------------- 225
           K GR+  A  + +++ DS   PNA+ YT+++K                            
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR 548

Query: 226 -------CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                  C F+  +   G  +   +K +G+  D   Y  +I   VK G  +E  +    M
Sbjct: 549 LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM 608

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---------------------- 316
              G  LD  +YNT I+ +CK GK+  AY LL+EM+ +                      
Sbjct: 609 KEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRL 668

Query: 317 -------------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                        G E +   ++ LIDG  K G I  A L +E + + G   N+  +NC+
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K  +I+ A+  F++M+      +  TYS +++ LC+ ++   A        K G+
Sbjct: 729 LDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGL 788

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +        ++ GL  +G   EA  +  + +
Sbjct: 789 KPNTITYTTMIAGLAKAGNIAEASSLFERFK 819



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 186/413 (45%), Gaps = 37/413 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +NI +   CKA +L++A   I +G+   +  PD VT+  LID   +    D  Y +  +M
Sbjct: 445 VNIMIDRLCKAKKLDEA-CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM 503

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            ++   P+ V Y SLI    +         +  EM+  G  PD+   N+ M C+F+ G+ 
Sbjct: 504 LDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGET 563

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +   +F+++      P   +++I+++GL K  +      +F  +++ G V +   YN  
Sbjct: 564 GKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTF 623

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK+G++  A  +L+E+   G  P  +TY +++    +  +      +    K  G 
Sbjct: 624 IDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGL 683

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI--------------------- 287
             +   Y ++I  F K+GR+ EA   ME+++  G+  ++                     
Sbjct: 684 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALV 743

Query: 288 --------------VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
                         ++Y+ LIN  C+  K   A++   EM+KQG + +  T+T +I GL 
Sbjct: 744 CFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLA 803

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           KAGNI  A    E     G   +  +YN I++ L    +   A  +FE   +K
Sbjct: 804 KAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMK 856



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 177/404 (43%), Gaps = 40/404 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K+N+L +   +I    +    P    Y  LI A       D   T+ ++M+E G    V 
Sbjct: 175 KSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVH 234

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            + ++I    R   L  +L LLDEM    +  D+  YN  + C  + GK D A + F ++
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   T+  M+  LCK    D A+ +F  ++++  VP    YN +I G   AG+ 
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L+     G  P+ I Y  I+ C        LG                      
Sbjct: 355 DEAYSLLERQKARGCIPSVIAYNCILTC--------LG---------------------- 384

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
                K GRL EA    E+M  D    ++ +YN LI++ CK G++EAA+ + D M++ G 
Sbjct: 385 -----KKGRLGEALRTFEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T  I+ID LCKA  +  A    E MN      +   +  ++D LGK G++D A  
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYR 498

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++E M    ++ ++  Y+S++ +  K  R     K+    +  G
Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG 542



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 126/243 (51%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  +  FCK+ ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  G+  +VV Y+SLI G  +   +  +  +++E+++ G+ P+V+++N L+  L +
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ+M     TP   T++I++NGLC+ R  + A   ++ +QK G  P  +T
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I GL KAG +  A  + +    +G  P++ +Y  I++    +R+     +I    +
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854

Query: 245 RKG 247
            KG
Sbjct: 855 MKG 857



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 151/329 (45%), Gaps = 4/329 (1%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           RLLN  +    KA    K  A+  +    G +PDV++Y++LI    +       Y +   
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA 607

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+E G   D   YN+ I G  ++  ++ +  LL+EM   G  P V +Y S++  L ++ +
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDR 667

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA  +F++     L      ++ +++G  K    D A  +   L + G  P + T+N 
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+  L KA  +  A    + + +    PN ITY+ ++    R RK+         M+++G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y T+IA   K G + EA+   E+   +G   D  SYN +I       +   AY
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847

Query: 308 LLLDEMEKQGFECDKYTHT--ILIDGLCK 334
            + +E   +G  C+ +T T   L+D L K
Sbjct: 848 KIFEETRMKG--CNIHTKTCIALLDALQK 874



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 156/363 (42%), Gaps = 4/363 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +F K  R E    I  + I  G  PD+   N  +D   +      G  +   ++  G  P
Sbjct: 521 SFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP 580

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV++Y+ LI G  +      + +L   M E G   D  +YN+ +    + GK ++A ++ 
Sbjct: 581 DVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLL 640

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M      P   T+  +++GL K    D A  +F   + +G    +V Y+ LI G  K 
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A  I++EL   G  PN  T+  ++    +  +    L     MK    T +   Y
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    ++ +  +A  + ++M   G++ + ++Y T+I    K G +  A  L +  + 
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI--VDRLGKDGKI 373
            G   D  ++  +I+GL  +     A    E     G   N+    CI  +D L KD  +
Sbjct: 821 NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKG--CNIHTKTCIALLDALQKDECL 878

Query: 374 DHA 376
           + A
Sbjct: 879 EQA 881



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 5/301 (1%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y+SL+  + +  K D   ++  +M      P T T   ++    K+        + + +
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +K  F P    Y  LI  L           +  ++ + G+  +   +TT+++   R  + 
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +L  MK      D   Y   I  F K G++  A  +  ++ + G+  D V+Y ++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I + CK  +L+ A  + ++ME+       Y +  +I G   AG    A   LE     G 
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASK 409
             ++ AYNCI+  LGK G++  A+  FE M+ KD+     TY+ ++  LCKA  + +A K
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 410 L 410
           +
Sbjct: 429 V 429


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 210/416 (50%), Gaps = 14/416 (3%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G LPD+VTYN LID YC++   +     + R+R A    D+V++N+L  G  +  +   
Sbjct: 1   MGSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEE 60

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
               +  M +  +P +V +Y + +  L ++G  D   + F++M    + P    F  +++
Sbjct: 61  VFIYMGLMWKCCLP-NVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLID 119

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  K    D A ++++ + K   +P + TY  LI G CK G L  A W   ++ + G  P
Sbjct: 120 GYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMP 179

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N+  YT+I+   F+     + ++  S M+++ +  D   Y  VI+  V  GRL +  + M
Sbjct: 180 NSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVM 239

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E MV +G+  D V   TL++ + K G  +AAY +  E+  +GFE D  T + LIDGLCK 
Sbjct: 240 EDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKD 299

Query: 336 GNIKGARLHL--EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSF 389
           G    A+ +   E  N++       +Y  ++D + K+G +D    V     ES  V D F
Sbjct: 300 GRYHDAKGYFCKEKANEV-------SYTALIDGICKEGNLDEVERVVMEMSESGFVPDKF 352

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            Y+S +  LC+  ++  A K+    ++ G+ +      +++ GL + G   EAK++
Sbjct: 353 VYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQL 408



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 9/405 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FCK  R  K E  I  G+     LP+V+TY   ID  C+    D GY     MR+ GI P
Sbjct: 52  FCK--RKMKEEVFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVP 109

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +++ +  LI G ++   L  +  L  +M +    P+V++Y +L++   + G  + A   F
Sbjct: 110 NLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFF 169

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   + P +  +  +++G  K    D A++ F  ++K  F  ++V Y ++I GL   
Sbjct: 170 LKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNN 229

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GRL     +++++  +G AP+ +  TT+M   F+    K    +   +  +G+  D    
Sbjct: 230 GRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTI 289

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I    K GR  +A  Y  +      + + VSY  LI+  CKEG L+    ++ EM +
Sbjct: 290 SSLIDGLCKDGRYHDAKGYFCKE-----KANEVSYTALIDGICKEGNLDEVERVVMEMSE 344

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            GF  DK+ +T  I  LC+ G I  A      M + G D +L  Y+ ++  L   G +  
Sbjct: 345 SGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIE 404

Query: 376 AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           A  +F+ M +K      SMV ++     L   + + +S L   +R
Sbjct: 405 AKQLFDDM-LKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMR 448



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 13/305 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   LE+AE   +  + +G++P+   Y  +ID + +  + D      + MR+     D
Sbjct: 156 FCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLD 215

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V Y  +I+G   N  L   L+++++M+  G+ PD     +LMH  F+ G    A  V++
Sbjct: 216 IVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYR 275

Query: 137 DMICGDLTPCTATFNIMLNGLCKN-RYTDNALRMFRGLQKHGFVPEL---VTYNILIKGL 192
           +++     P   T + +++GLCK+ RY D          K  F  E    V+Y  LI G+
Sbjct: 276 ELLNRGFEPDAVTISSLIDGLCKDGRYHD---------AKGYFCKEKANEVSYTALIDGI 326

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK G L     ++ E+ +SG  P+   YT+ +    R  K     ++ + M  +G   D 
Sbjct: 327 CKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDL 386

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y ++I      G + EA    + M+  G+  D + ++ LI  Y K+    A   L +E
Sbjct: 387 LTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEE 446

Query: 313 MEKQG 317
           M ++G
Sbjct: 447 MRRRG 451



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 164/362 (45%), Gaps = 31/362 (8%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           T CK   L+       +  + G++P+++ +  LID Y +  + D  Y +   M ++   P
Sbjct: 85  TLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLP 144

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V TY +LI G  +  +L  +     +MLE+GI P+   Y S++   F+ G  D A + F
Sbjct: 145 NVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYF 204

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M           + ++++GL  N   D  L +   + ++G  P+ V    L+    KA
Sbjct: 205 SEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKA 264

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY---------------------- 233
           G  + A  + +EL + G  P+A+T ++++    ++ +Y                      
Sbjct: 265 GNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANEVSYTALID 324

Query: 234 ---KLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              K G       ++  M   G+  D F Y + IA   + G++ EA     +MV +G+ L
Sbjct: 325 GICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDL 384

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLH 344
           D+++Y++LI     +G +  A  L D+M K+G   D     ILI G  K  N +  + LH
Sbjct: 385 DLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLH 444

Query: 345 LE 346
            E
Sbjct: 445 EE 446



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 147/355 (41%), Gaps = 40/355 (11%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           MG  PD+ +YNSL+    + G+ +EA    + +   +      +FN + NG CK +  + 
Sbjct: 1   MGSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEE 60

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
              ++ GL     +P ++TY   I  LCK G L T     KE+   G  PN I +T ++ 
Sbjct: 61  VF-IYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLI- 118

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
                                    DG+          KIG L  A    + M       
Sbjct: 119 -------------------------DGYS---------KIGNLDFAYQLYKDMCKSMHLP 144

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           ++ +Y  LIN +CK G LE A     +M + G   +   +T +IDG  K GNI  A  + 
Sbjct: 145 NVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYF 204

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
             M K  F  ++ AY  ++  L  +G++D  + V E M       D    ++++H   KA
Sbjct: 205 SEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKA 264

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
               +A  +    L  G         +++DGL   G   +AK    K +  ++S+
Sbjct: 265 GNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANEVSY 319


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 208/415 (50%), Gaps = 10/415 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   C   R+ +A  ++   +  G +P VVTY  L+   C+    D    +L R+ 
Sbjct: 250 FNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP 309

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E     +VV  N++I G      L+ + +L + M   G PPDV +Y+ LMH L +LG+  
Sbjct: 310 EV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFG 365

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A R+  +M      P   T++ +L+  C+N   D+A  M   +   GF      YN +I
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G+L  A  +++E+   G  P+  TY T++     N   +    I   +  +G  
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +G  Y T+I A ++ GR +E      +M+  G QLD++SYN LI   CKEG ++ +  L
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL 545

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L+EM  +G + + +++ +LI+ LCKAG ++ A  L  E +N+ G   ++  YN +++ L 
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ-GLTPDIVTYNTLINGLC 604

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           K G    A+N+ E +  +    D  TY+ ++   CK + L  A+ LL   +  G+
Sbjct: 605 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 222/480 (46%), Gaps = 37/480 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  N+ + T  +A+    A  +    +R  V P   T+ +   A C+         +L
Sbjct: 141 SFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALL 200

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G  PD V Y ++I        ++ +  LLDEML MG   DV ++N L+  L  L
Sbjct: 201 RGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGL 260

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF--------------- 170
           G+  EA R+   M+     P   T+  +L GLC+ R  D A  M                
Sbjct: 261 GRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVI 320

Query: 171 RG----------------LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           RG                +   G  P++ TY+IL+ GLCK GR  +A  +L E+ + G A
Sbjct: 321 RGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +TY+T++    RN  +     +L  M  KG++ +  GY  +I A  K G+L +AT  
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M + G + DI +YNT+I   C    +E A  +   + ++G   +  T+  LI  L +
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500

Query: 335 AGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
            G  + G RL  E +   G   ++ +YN ++  L K+G +D ++ + E M  K    ++F
Sbjct: 501 NGRWQEGLRLASEMLLH-GCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNF 559

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +Y+ +++ LCKA ++  A +L    L  G+         +++GL   G    A  +  K+
Sbjct: 560 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 165/328 (50%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PDV TY++L+   C+   F +   +L+ M E G +P++VTY++L+    RN +   +
Sbjct: 343 GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 402

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +LD+ML  G   +   YN +++ L + GK D+A R+ Q+M      P   T+N M+  
Sbjct: 403 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH 462

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC N   + A  +FR L + G V   +TYN LI  L + GR +    +  E+   G   +
Sbjct: 463 LCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLD 522

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            I+Y  ++K   +       + +L  M  KG   + F Y  +I    K G++++A +  +
Sbjct: 523 VISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSK 582

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G+  DIV+YNTLIN  CK G   AA  LL+++  +    D  T+ ILI   CK  
Sbjct: 583 EMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 642

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +  A + L+     G   N   +  +V
Sbjct: 643 LLDDAAMLLDKAISGGIVPNERTWGMMV 670



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 180/394 (45%), Gaps = 44/394 (11%)

Query: 96  SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
           +L LLD+M     + P   SYN ++  L +     +A  +++ M+   + P T TF +  
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELV------------------------------- 183
             LC+     +AL + RG+ +HG VP+ V                               
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 184 ----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
               T+N L+ GLC  GR+R A  ++  +   G  P+ +TY  +++   R R+      +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L  +             TVI   +  G+L  AT+  E M + G   D+ +Y+ L++  CK
Sbjct: 305 LGRLPEVNVVM----LNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G+  +A  +LDEME++G   +  T++ L+   C+ G    AR  L+ M   GF  N + 
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN I+  L KDGK+D A  + + M+ +    D  TY++M+++LC    +  A  +  + +
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + GV         ++  L  +G  +E  ++ S++
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEM 514



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 169/391 (43%), Gaps = 8/391 (2%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  V P   +YN+++    +         +  RM    + P   T+        R     
Sbjct: 135 RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L LL  M   G  PD   Y +++H L   G   EA  +  +M+         TFN ++
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            GLC       A R+   +   G +P +VTY  L++GLC+  +   A  +L  L +    
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV--- 311

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N +   T+++ C    K     E+   M  KG   D   Y  ++    K+GR   A   
Sbjct: 312 -NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM 370

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M   G   +IV+Y+TL++ +C+ G  + A  +LD+M  +GF  +   +  +I  LCK
Sbjct: 371 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 430

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFT 390
            G +  A   ++ M   G   ++  YN ++  L  +  ++ A ++F    E   V +  T
Sbjct: 431 DGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGIT 490

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           Y++++H L +  R     +L    L  G ++
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQL 521



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 115/220 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C  + +E+AE I  + I  GV+ + +TYN LI A  +   +  G  + + M  
Sbjct: 457 NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL 516

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DV++YN LI    +   +  S+ LL+EM+  GI P+ +SYN L++ L + GK  +
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRD 576

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M+   LTP   T+N ++NGLCK  +T  AL +   L      P++VTYNILI 
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
             CK   L  A  +L +    G  PN  T+  +++   R 
Sbjct: 637 WHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/312 (20%), Positives = 136/312 (43%), Gaps = 8/312 (2%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           ++P   ++N++L+ L +     +AL ++R + +    P   T+ +  + LC+ GR   A 
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L+ +   G  P+A+ Y T++              +L  M   G   D   +  ++   
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGL 257

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
             +GR++EA   +++M+T G    +V+Y  L+   C+  + + A  +L  +     E + 
Sbjct: 258 CGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNV 313

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
                +I G    G +  A    E M   G   ++  Y+ ++  L K G+   A+ + + 
Sbjct: 314 VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDE 373

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ME K    +  TYS+++H+ C+      A  +L   L  G  +       ++  L   G 
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433

Query: 439 RREAKKIQSKIR 450
             +A ++  +++
Sbjct: 434 LDQATRLVQEMK 445


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 201/403 (49%), Gaps = 4/403 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK  +L+KA+  I     LGV P+VVTYN +I  YC     +    +L+ M+
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK 298

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD  TY SLI+G  +   L  +  +L++M E+G+ P   +YN+L+      G   
Sbjct: 299 NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLV 358

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A     +M+   + P  +T+N++++ L      D A  M + +   G VP+ +TYNILI
Sbjct: 359 KAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+ G  + A  +  E+   G  P  +TYT+++    +  + K   ++   + R+G +
Sbjct: 419 NGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS 478

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  +I      G L  A   +++M    +  D V+YNTL+   C+EGK+E A  L
Sbjct: 479 PDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM+++G   D  ++  LI G  K G+I  A    + M  IGF+  L  YN ++  L K
Sbjct: 539 LKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
           + + D A  + + M  K    D  TY S++  + K      AS
Sbjct: 599 NQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 210/428 (49%), Gaps = 4/428 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  F K N+ E    +  +  RL +   V T+N++I+  C+          +  M 
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VVTYN++I G      +  +  +LD M   G+ PD ++Y SL+  + + GK +
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA+ + + M    L P   T+N +++G C       A      + +   +P + TYN+LI
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L   G++  A  ++K++GDSG  P++ITY  ++    R    K    +   M  KG  
Sbjct: 384 HALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQ 443

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y ++I    K  R+K A D  E+++ +G   D++ +N LI+ +C  G L+ A+ L
Sbjct: 444 PTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFAL 503

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM+K+    D+ T+  L+ G C+ G ++ AR  L+ M + G   +  +YN ++    K
Sbjct: 504 LKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSK 563

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G I+ A  + + M          TY++++  LCK ++   A +LL   +  G+    S 
Sbjct: 564 RGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDST 623

Query: 426 QKAVVDGL 433
             ++++G+
Sbjct: 624 YFSLIEGI 631



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 197/419 (47%), Gaps = 5/419 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           RLG    +V ++MLI A C+    D  +   + M+E G+ P + T+N++++   + +   
Sbjct: 160 RLGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTE 218

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
               L  EM  + I   V+++N +++ L + GK  +A      M    + P   T+N ++
Sbjct: 219 TVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVI 278

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G C     + A  +   ++  G  P+  TY  LI G+CK G+L  A  IL+++ + G  
Sbjct: 279 HGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL 338

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P A+TY T++                  M R+        Y  +I A    G++ EA   
Sbjct: 339 PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++ M   G+  D ++YN LIN YC+ G  + A+ L DEM  +G +    T+T LI  L K
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSK 458

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
              +K A    E + + G   +L  +N ++D    +G +D A  + + M+    V D  T
Sbjct: 459 RNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVT 518

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y++++   C+  ++  A +LL    + G+R    +   ++ G    G   +A  I+ ++
Sbjct: 519 YNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 138/265 (52%), Gaps = 4/265 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +       ++++A+ +I D    G++PD +TYN+LI+ YC+  +    + + + M  
Sbjct: 380 NLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMIS 439

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
            GI P +VTY SLI   ++ + +  + DL ++++  G  PD+  +N+L+  HC    G  
Sbjct: 440 KGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHC--ANGNL 497

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  + ++M   ++ P   T+N ++ G C+    + A  + + +++ G  P+ ++YN L
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K G +  A  I  E+   G  P  +TY  +++   +N++  L  E+L  M  KG 
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGI 617

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATD 273
           T D   Y ++I    K+    EA+D
Sbjct: 618 TPDDSTYFSLIEGIGKVDDSSEASD 642



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 41/198 (20%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I A  ++ R  +A +  + M   GV   I ++N +++L+ K  + E  ++L  EM +  
Sbjct: 172 LIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLK 231

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            +   YT  I+I+ LC                                   K+GK+  A 
Sbjct: 232 IKSTVYTFNIMINVLC-----------------------------------KEGKLKKAK 256

Query: 378 NVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKS-GVRILKSAQKAVVDG 432
           +   SME   VK +  TY++++H  C   R+  A +++L  +K+ GV        +++ G
Sbjct: 257 DFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA-RMVLDIMKNRGVEPDSYTYGSLISG 315

Query: 433 LRHSGCRREAKKIQSKIR 450
           +   G   EA  I  K++
Sbjct: 316 MCKGGKLEEASGILEKMK 333


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 189/375 (50%), Gaps = 4/375 (1%)

Query: 41   DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
            DV TY M+IDA C+         + + M  AGI PDVV Y+SL+ G  R   L  +L+  
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143

Query: 101  DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             EM   GI  DV++YNSL+H L + G   E       M+    +P   TF I+++GLCK 
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203

Query: 161  RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                 A ++   ++  G  P+++TYN L+ GLC  G+L  A  + + L D G   N  +Y
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263

Query: 221  TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
              ++    +++K          M+ KG       Y T+I A  + GR++ A     +M T
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323

Query: 281  DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
             G  L + +Y  L++  CK G LE A  L   ++K   + +    +IL+DG+C+AG ++ 
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383

Query: 341  ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
            A    + ++K G + +  AYN +++ L   G +  A+ +   ME K    DS T++ ++ 
Sbjct: 1384 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 1443

Query: 397  NLCKAKRLPSASKLL 411
            NL K   +  A +LL
Sbjct: 1444 NLLKENEIHEAIQLL 1458



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 198/413 (47%), Gaps = 6/413 (1%)

Query: 12   ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
            + +   CK     +A  +  + I  G+LPDVV Y+ L+D  C+F            M   
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149

Query: 72   GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            GIS DV TYNSLI G +R  L       L+ M++ G  PD +++  L+  L + GK  EA
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEA 1209

Query: 132  NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ + M      P   T+N ++NGLC     ++A ++F  L   G    + +YNILI G
Sbjct: 1210 QQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILING 1269

Query: 192  LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
             CK  ++  A    +E+   G  P+ +TY T++    ++ + +   ++   M+  G    
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK 1329

Query: 252  GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
               YC ++    K G L+EA D  + +     + +I  ++ L++  C+ GKLE A+   D
Sbjct: 1330 LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFD 1389

Query: 312  EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            E+ K G E D   + ILI+GLC  G +  A   L  M + G   +   +N I+  L K+ 
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449

Query: 372  KIDHAINVFESMEVKDSFTYSSMVHN--LCKAKRLPSASKLLLS---CLKSGV 419
            +I  AI + E M  ++ F+    V +  LC A   P     L+S    L+ GV
Sbjct: 1450 EIHEAIQLLEEMRNRN-FSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 215/448 (47%), Gaps = 38/448 (8%)

Query: 36   LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            +G+ PD+ T N+LI   C   +   G+ +     + G  PD VT  +L+ G    + +  
Sbjct: 975  VGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPD 1034

Query: 96   SLDLLDEMLEMGI----------------------------------PPDVWSYNSLMHC 121
            ++ L DEM + G+                                    DV++Y  ++  
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDA 1094

Query: 122  LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
            L + G   EA  +F +MI   + P    ++ +++GLC+      AL  F+ ++  G   +
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154

Query: 182  LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            + TYN LI GL +AG  +   W L  + D G +P+A T+T ++    +  K     +IL 
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214

Query: 242  AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
             M+ KG   D   Y T++     +G+L++AT   E +   G++L++ SYN LIN YCK+ 
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274

Query: 302  KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            K++ A+   +EM  +G +    T+  LI  LC++G ++ A+     M   G    L  Y 
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334

Query: 362  CIVDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKS 417
             ++D L K+G ++ A+++F+S+   E K +   +S ++  +C+A +L  A K      K+
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394

Query: 418  GVRILKSAQKAVVDGLRHSGCRREAKKI 445
            G+     A   +++GL + G   EA K+
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKL 1422



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 203/418 (48%), Gaps = 15/418 (3%)

Query: 12   ICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            + V T  K   +E     I D ++L       G+L D  TY +LI+  C+         +
Sbjct: 1017 VTVTTLVKGVWMENG---IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL 1073

Query: 65   LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              +M+      DV TY  +I    ++ + + +LD+  EM+  GI PDV  Y+SLM  L +
Sbjct: 1074 HEKMK-GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 1132

Query: 125  LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             G+  EA   F++M    ++    T+N +++GL +             +   GF P+  T
Sbjct: 1133 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 1192

Query: 185  YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
            + ILI GLCK G++  A+ IL+ +   G  P+ +TY T+M       + +   ++  ++ 
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252

Query: 245  RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             +G   + F Y  +I  + K  ++ EA  + E+M   G++   V+YNTLI   C+ G++ 
Sbjct: 1253 DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 1312

Query: 305  AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
             A  L  EM+  G      T+ +L+DGLCK G+++ A    + + K     N+E ++ ++
Sbjct: 1313 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILL 1372

Query: 365  DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            D + + GK++ A   F+ +       D+  Y+ +++ LC    L  A KLL    + G
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 205/417 (49%), Gaps = 7/417 (1%)

Query: 39   LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
            +P   T+N L+ +  +   +   + +  ++ + GI PD+ T N LI        + C   
Sbjct: 943  MPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFG 1002

Query: 99   LLDEMLEMGIPPDVWSYNSLMHCLF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +    L+ G  PD  +  +L+  ++ + G PD A ++F +M    L     T+ I++NGL
Sbjct: 1003 VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTKKGLLGDAKTYGILINGL 1061

Query: 158  CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            CK R T  A+++   + K     ++ TY ++I  LCK G    A  +  E+  +G  P+ 
Sbjct: 1062 CKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDV 1120

Query: 218  ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            + Y+++M    R  + K  LE    M+ +G + D + Y ++I    + G  KE T ++  
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180

Query: 278  MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
            MV  G   D  ++  LI+  CKEGK+  A  +L+ M  +G E D  T+  L++GLC  G 
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240

Query: 338  IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
            ++ A    E +   G   N+ +YN +++   KD KID A   FE M  K     + TY++
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 394  MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++  LC++ R+ +A KL +     G  +  S    ++DGL  +G   EA  +   I+
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 38/340 (11%)

Query: 120  HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
             C F + K ++A ++F   +C +  PCT TFN +L  + K  Y      M+R +   G  
Sbjct: 919  QCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQ 978

Query: 180  PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            P+L T NILI   C    +     +       G  P+A+T TT++K  +        +++
Sbjct: 979  PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQL 1038

Query: 240  LSAMKRKGYTFDG----------------------------------FGYCTVIAAFVKI 265
               M +KG   D                                   F Y  +I A  K 
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKD 1098

Query: 266  GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
            G   EA D   +M+  G+  D+V Y++L++  C+ G+L+ A     EME +G   D YT+
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158

Query: 326  TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
              LI GL +AG  K     L  M   GF  +   +  ++D L K+GK+  A  + E M  
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218

Query: 386  K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            K    D  TY+++++ LC   +L  A+KL  S    G+++
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 119/244 (48%)

Query: 4    KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
            KL+    NI +  +CK  ++++A     +    G+ P  VTYN LI A CQ         
Sbjct: 1257 KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQK 1316

Query: 64   ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +   M+  G    + TY  L+ G  +N  L  ++DL   + +    P++  ++ L+  + 
Sbjct: 1317 LFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMC 1376

Query: 124  QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + GK +EA + F ++    L P T  +NI++NGLC       A+++   +++ G +P+ +
Sbjct: 1377 RAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 1436

Query: 184  TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            T+N++I+ L K   +  A  +L+E+ +   +P+    + ++     + ++   L  L   
Sbjct: 1437 TFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNA 1496

Query: 244  KRKG 247
             +KG
Sbjct: 1497 LQKG 1500



 Score = 38.9 bits (89), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 41/98 (41%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +   C    L +A  ++      G LPD +T+N++I    +         +L  MR 
Sbjct: 1404 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 1463

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
               SPD    + L+  A+ +     +L  L   L+ G+
Sbjct: 1464 RNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 203/414 (49%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN +I  +C+    +A   +LNRM+  G  PD+VTYN +I        L  +L +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD++L     P V +Y  L+      G  +EA ++ ++M+   L P   T+N ++ G+CK
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               + A  +   L   G  P++++YNIL++     G+      ++ E+   G  PN +T
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R  +    + +L  M  K  T D + Y  +I+A  K GRL  A   M+ M+
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           ++G   DIV+YNT++   CK G    A  + +++   G   +  ++  +I  L   G+  
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A   +  M   G D +   YN ++  L +DG ++ AI + + ME         +Y+ ++
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +R+  A  +    ++ G R  ++    +++G+  +G R EA ++ + +
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 35/418 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR--- 67
           N  +  FCK N++E A  ++      G LPD+VTYN++I + C         T+L++   
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210

Query: 68  --------------------------------MREAGISPDVVTYNSLIAGATRNSLLSC 95
                                           M   G+ PD+ TYN++I G  +  ++  
Sbjct: 211 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 270

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           + +L+  +   G  PDV SYN L+      GK DE  ++  +M      P   T++I+++
Sbjct: 271 AAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 330

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC+    D A+ + + + +    P+  +Y+ LI  LCK GRL  A  I+  +  +G  P
Sbjct: 331 SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLP 390

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + Y TI+    +N      LEI + ++  G   +   Y T+I+A    G    A   +
Sbjct: 391 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 450

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M++ G+  D ++YN+LI+  C++G +E A  LLD+ME+ GF     ++ I++ GLCK 
Sbjct: 451 PAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 510

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
             I  A      M + G   N   Y  +++ +G  G    A+ +  S+  +D  +  S
Sbjct: 511 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 568



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 40/337 (11%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------------- 183
           +LN  CK    + +L     L   G+ P+++                             
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143

Query: 184 -----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                 YN +I G CK  ++  A  +L  +   G  P+ +TY  ++      RK  L L 
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  +           Y  +I A +  G + EA   +E+M+  G+  D+ +YN +I   C
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNL 357
           KEG +E A  L+  +  +G E D  ++ IL+      G   +G +L  E  ++ G + N 
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPNK 322

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
             Y+ ++  L + G+ID AI+V + M  K    D+++Y  ++  LCK  RL  A  ++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            + +G          ++  L  +G   +A +I +K+R
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 419


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 215/437 (49%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P+ +TY  ++D  C+     +   +L +M E   I P
Sbjct: 187 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKP 246

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I G  ++   + + +L  EM E GI P++++YN +++     G+  EA R+ 
Sbjct: 247 NVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLL 306

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M    ++P   TF++++N L K      A  ++  +   G +P  +TYN +I G  K 
Sbjct: 307 REMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQ 366

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +P+ IT++ ++      ++   G+++L  M R+G   +   Y
Sbjct: 367 NRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITY 426

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F ++G L  A D +++M++ GV  ++V+ NTL++  C  GKL+ A  +   M+K
Sbjct: 427 TTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486

Query: 316 QGF-----------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                         E D  T+ ILI GL   G    A    E M   G   +   YN ++
Sbjct: 487 SKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI 546

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F+SM  K    D  T++++++  CK  R+    ++     + G+ 
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV 606

Query: 421 ILKSAQKAVVDGLRHSG 437
                 + ++ G    G
Sbjct: 607 ANAITYRTLIHGFCQVG 623



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 195/408 (47%), Gaps = 15/408 (3%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R   A+ +  +    G+ P++ TYN +I+ +C    +     +L  M E  +SPDVV
Sbjct: 260 KDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVV 319

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T++ LI    +      + +L +EML  GI P+  +YNS++    +  + D A R+F  M
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLM 379

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                +P   TF+I+++G C  +  D+ +++   + + G V   +TY  LI G C+ G L
Sbjct: 380 ATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNL 439

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF----- 253
             A  +L+E+  SG  PN +T  T++     N K K  LE+   M++     D       
Sbjct: 440 NAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFND 499

Query: 254 ------GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  +I   +  G+  EA +  E+M   G+  D ++YN++I+  CK+ +L+ A 
Sbjct: 500 VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEAT 559

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            + D M  +GF  D  T T LI+G CK G +         M + G  +N   Y  ++   
Sbjct: 560 QMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
            + G I+ A+++F+ M       D+ T  +M+  L   + L  A + L
Sbjct: 620 CQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 207/451 (45%), Gaps = 47/451 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---------------- 53
             I +  FC  ++L  A +      +LG  P +VT++ L+   C                
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC 173

Query: 54  --QFVSFDA-------------GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
               ++F                  +L+RM E G+ P+ +TY +++ G  +      +L+
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 99  LLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           LL +M E+  I P+V  Y++++  L++ G+  +A  +F +M    ++P   T+N M+NG 
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           C +     A R+ R + +    P++VT+++LI  L K G+   A  +  E+   G  PN 
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           ITY +++    +  +      +   M  KG + D   +  +I  +    R+ +    + +
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G+  + ++Y TLI+ +C+ G L AA  LL EM   G   +  T   L+DGLC  G 
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473

Query: 338 IKGARLHLEYMNKIGFD-----------SNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           +K A    + M K   D            +++ YN ++  L  +GK   A  ++E M   
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             V D+ TY+S++  LCK  RL  A+++  S
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDS 564



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 153/296 (51%), Gaps = 12/296 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K NRL+ AE +       G  PDV+T+++LID YC     D G  +L+ M   G+  +
Sbjct: 363 FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVAN 422

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY +LI G  +   L+ +LDLL EM+  G+ P+V + N+L+  L   GK  +A  +F+
Sbjct: 423 TITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFK 482

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M              D+ P   T+NI++ GL        A  ++  +   G VP+ +TY
Sbjct: 483 VMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I GLCK  RL  A  +   +G  G +P+ +T+TT++    +  +   GLE+   M R
Sbjct: 543 NSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGR 602

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKE 300
           +G   +   Y T+I  F ++G +  A D  ++M++ GV  D ++  N L  L+ KE
Sbjct: 603 RGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 658



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 169/343 (49%), Gaps = 11/343 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +    K  +  +AE +  + +  G++P+ +TYN +ID + +    DA   +   M 
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G SPDV+T++ LI G      +   + LL EM   G+  +  +Y +L+H   QLG  +
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--------HGF--- 178
            A  + Q+MI   + P   T N +L+GLC N    +AL MF+ +QK        H F   
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P++ TYNILI GL   G+   A  + +E+   G  P+ ITY +++    +  +     +
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +  +M  KG++ D   + T+I  + K+GR+ +  +   +M   G+  + ++Y TLI+ +C
Sbjct: 561 MFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFC 620

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           + G +  A  +  EM   G   D  T   ++ GL     +K A
Sbjct: 621 QVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 198/426 (46%), Gaps = 9/426 (2%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R   LP V+ +  L+    +    D   ++  +M    I  ++ ++  LI      S L
Sbjct: 68  VRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKL 127

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L    ++ ++G  P + ++++L+H L    +  EA   F   IC    P    F  +
Sbjct: 128 PFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ-IC---KPNVIAFTTL 183

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SG 212
           +NGLC+      A+ +   + + G  P  +TY  ++ G+CK G   +A  +L+++ + S 
Sbjct: 184 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR 243

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN + Y+ I+   +++ +      + S M+ KG + + F Y  +I  F   GR  EA 
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             + +M    +  D+V+++ LIN   KEGK   A  L +EM  +G   +  T+  +IDG 
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            K   +  A      M   G   ++  ++ ++D      ++D  + +   M     V ++
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            TY++++H  C+   L +A  LL   + SGV         ++DGL ++G  ++A ++   
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483

Query: 449 IRMAKI 454
           ++ +K+
Sbjct: 484 MQKSKM 489



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 11/235 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA----- 71
           FC+   L  A  ++ + I  GV P+VVT N L+D  C          +   M+++     
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492

Query: 72  ------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
                  + PDV TYN LI G       S + +L +EM   G+ PD  +YNS++  L + 
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQ 552

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            + DEA ++F  M     +P   TF  ++NG CK     + L +F  + + G V   +TY
Sbjct: 553 SRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITY 612

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             LI G C+ G +  A  I +E+  SG  P+ IT   ++   +   + K  ++ L
Sbjct: 613 RTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 9/310 (2%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A  +F  M+     PC   F  +L  + +    D  + + R ++       + ++ IL
Sbjct: 58  DDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTIL 117

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           IK  C   +L  A     ++   G  P+ +T++T++       +    L     + +   
Sbjct: 118 IKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNV 177

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 + T++    + GR+ EA   +++MV DG+Q + ++Y T+++  CK G   +A  
Sbjct: 178 ----IAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 309 LLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           LL +ME+    + +   ++ +IDGL K G    A+     M + G   NL  YNC+++  
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 368 GKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              G+   A      +FE     D  T+S +++ L K  +   A +L    L  G+    
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 424 SAQKAVVDGL 433
               +++DG 
Sbjct: 354 ITYNSMIDGF 363



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 81/174 (46%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L +A D    MV       ++ +  L+ +  +  + +    L  +ME +   
Sbjct: 49  SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           C+ Y+ TILI   C    +  A      + K+GF  +L  ++ ++  L  + ++  A++ 
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           F  +   +   ++++++ LC+  R+  A  LL   ++ G++  +     +VDG+
Sbjct: 169 FHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 224/458 (48%), Gaps = 13/458 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FCK   ++ A++     I+ G+LPDV +YN+L+   C   S +      N M 
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGK 127
             G+ PD+VTYN L  G     L+S +  ++  ML  G+ PD+ +Y  L+  HC  Q+G 
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC--QMGN 390

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +E+ ++ + M+   L     T+ ++L+ LCK+   D A+ +   ++  G  P+L+TY++
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK G +  A  + +E+      PN+   + I+   F             ++ +  
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y  +I  + K+G + EA    +Q++  G+   IV++N+LI  +CK+GKL  A 
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LLD ++  G      T+T L++G C+ G++      L  M           Y  +V  L
Sbjct: 571 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 630

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+G++  ++ + + M  +    D  TY++++ + CKA  L  A +L    L+  ++   
Sbjct: 631 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 690

Query: 424 SAQKAVVDGLRHSGCRREAKKI-----QSKIRMAKISH 456
                +++GL   G  ++A ++        IR+ K+++
Sbjct: 691 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAY 728



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 199/417 (47%), Gaps = 14/417 (3%)

Query: 12  ICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I +C  C+   +E++    E ++  G++L +    VTY +L+ + C+    D    +L+ 
Sbjct: 380 ILICGHCQMGNIEESFKLKEKMLSQGLKLSI----VTYTVLLSSLCKSGRIDEAVILLHE 435

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G+ PD++TY+ LI G  +   +  +++L +EM    I P+ +  ++++  LF+ G 
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 495

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA   F  +   D+      +NIM++G  K      A+R ++ + + G  P +VT+N 
Sbjct: 496 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 555

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CK G+L  A  +L  +   G  P ++TYTT+M             ++L  M+ K 
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  V+    K GRL E+   ++ M   G+  D ++YNT+I  +CK   L+ A+
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L ++M +   +    T+ +LI+GLC  GN+K A   L  +          AY  I+   
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 735

Query: 368 GKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              G + +A+  F  M V+  F      YS++++ LCK   +  A       L  G+
Sbjct: 736 CAKGDVQNALVFFHQM-VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 791



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 184/373 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS     + + + CK+ R+++A  ++ +   +G+ PD++TY++LI   C+  + +    
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIE 466

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I P+    +++I+G      +S +    D + +  +  ++  YN ++    
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG   EA R ++ +I   ++P   TFN ++ G CK      A+++   ++ HG VP  V
Sbjct: 527 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 586

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ G C+ G + +   +L E+      P  ITYT ++K   +  +    +++L  M
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 646

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D   Y TVI +F K   L++A     QM+   +Q   V+YN LIN  C  G L
Sbjct: 647 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNL 706

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LL  ++ Q     K  +T +I   C  G+++ A +    M + GF+ ++  Y+ +
Sbjct: 707 KDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAV 766

Query: 364 VDRLGKDGKIDHA 376
           ++RL K   I  A
Sbjct: 767 INRLCKRNLITDA 779



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 202/459 (44%), Gaps = 74/459 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A  +E+A     D    GV PD+VTYN+L + +         + ++ RM  
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL 368

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD+VTY  LI G  +   +  S  L ++ML  G+   + +Y  L+  L + G+ DE
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM--------------------- 169
           A  +  +M    L P   T++++++GLCK    + A+ +                     
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 488

Query: 170 --------------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                         F  + K     E++ YNI+I G  K G +  A    K++ + G +P
Sbjct: 489 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 548

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             +T+ +++                            +G+C       K G+L EA   +
Sbjct: 549 TIVTFNSLI----------------------------YGFC-------KKGKLAEAVKLL 573

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + +   G+    V+Y TL+N YC+EG + + + +L EME +  +  + T+T+++ GLCK 
Sbjct: 574 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 633

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTY 391
           G +  +   L+YM   G   +   YN ++    K   +  A  +   M    ++ S  TY
Sbjct: 634 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 693

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           + +++ LC    L  A +LL++     +R+ K A   ++
Sbjct: 694 NVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 199/415 (47%), Gaps = 15/415 (3%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + ++  C + +A  +  A  ++     L +   + TYN L+         D  + +
Sbjct: 166 LNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDV 222

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            N ++ +G+  +  T   LI G  R S L  ++  L E       P V S+N+LM    +
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G  D A   F  MI   L P   ++NI+L+GLC     + AL     ++ HG  P++VT
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--KCCFRN--RKYKLGLEIL 240
           YNIL  G    G +  A  +++ +  +G  P+ +TYT ++   C   N    +KL  ++L
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S    +G       Y  ++++  K GR+ EA   + +M   G++ D+++Y+ LI+  CK 
Sbjct: 403 S----QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G +E A  L +EM  +    + +  + +I GL + G I  A+++ + + K      +  Y
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 518

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N ++D   K G I  A+  ++ +  K       T++S+++  CK  +L  A KLL
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 573



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 7/314 (2%)

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M   +L    AT+N +L  L   R+TD    ++  ++  G      T  ILI GLC
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLC 246

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +  RL+ A   L+E G     P+ +++  +M    +     +       M + G   D +
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++      G ++EA ++   M   GV+ DIV+YN L N +   G +  A+ ++  M
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G   D  T+TILI G C+ GNI+ +    E M   G   ++  Y  ++  L K G+I
Sbjct: 367 LLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRI 426

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A+ +   MEV     D  TYS ++H LCK   +  A +L        +        A+
Sbjct: 427 DEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAI 486

Query: 430 VDGLRHSGCRREAK 443
           + GL   G   EA+
Sbjct: 487 ISGLFEKGAISEAQ 500



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 133/310 (42%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L NI +  + K   + +A       I  G+ P +VT+N LI  +C+         +L+ +
Sbjct: 517 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 576

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  G+ P  VTY +L+ G      +    D+L EM    I P   +Y  ++  L + G+ 
Sbjct: 577 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 636

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++ + M    L P   T+N ++   CK      A ++   + +H   P  VTYN+L
Sbjct: 637 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 696

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC  G L+ A  +L  L D       + YTTI+K        +  L     M  +G+
Sbjct: 697 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 756

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  VI    K   + +A  +   M+T G+  D      ++N + + G   + + 
Sbjct: 757 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 816

Query: 309 LLDEMEKQGF 318
           +   M K G 
Sbjct: 817 IFAMMIKCGL 826



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 78/170 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +FCKA+ L+KA  +    ++  + P  VTYN+LI+  C + +      +L  +++
Sbjct: 659 NTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQD 718

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I    V Y ++I        +  +L    +M+E G    +  Y+++++ L +     +
Sbjct: 719 QSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITD 778

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           A   F  M+   + P      +MLN   ++   ++   +F  + K G +P
Sbjct: 779 AKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 182/367 (49%), Gaps = 8/367 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P   TYN LI A C+          L+ M  +G  PD  T+NSLI G  R   L  + DL
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            D+M   G   D  SY +L+    + G+ DEA  +F+++   D+     T   ++ GLC 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMY----THAALVKGLCD 242

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            R  +  L M + +++ G+ P    Y  L+   C+  +   A  +L E+ D+G  P A+T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            T ++    R  +    + +  +MK KG   + + Y  ++  F  +G++ +A   ++QM 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+YN LI   C +G +E+A+ LL  ME  G   D+YT+ +LID LCK G + 
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A    + +   G   N   +N +++ L K GK D A    E M       D++TYS  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 396 HNLCKAK 402
            NLCK K
Sbjct: 483 ENLCKTK 489



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 206/460 (44%), Gaps = 41/460 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   L  A+  +   +R G  PD  T+N LI  YC+    D    + ++M  
Sbjct: 133 NALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPL 192

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDL------------------------------- 99
            G S D V+Y +LI G      +  +L+L                               
Sbjct: 193 RGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYM 252

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L +M E+G  P   +Y +L+    +  K +EA ++  +M    L PC  T   ++N  C+
Sbjct: 253 LQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCR 312

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+R+F  ++  G  P + TYN +++G C  G++  A  +L ++ + G  P+ +T
Sbjct: 313 EGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVT 372

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  +++    +   +    +L  M+  G   D + Y  +I A  K G++ EA    + + 
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G++ + V++NT+IN  CK GK + A   L++M   G   D YT++  I+ LCK    K
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKT---K 489

Query: 340 GARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
           G+R  L +++++       +   Y  ++DRL K+     A  ++  M       D  TY+
Sbjct: 490 GSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYT 549

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + V   C   RL  A  +++   K G+ +   A   ++DG
Sbjct: 550 TSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 207/458 (45%), Gaps = 22/458 (4%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V  +C+  R+  A   + + ++L G  P+V TYN ++  +C          +L++MRE G
Sbjct: 307 VNAYCREGRMSGA-VRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + PDVVTYN LI G   +  +  +  LL  M   G+  D ++YN L+  L + GK DEA 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            +F  +    + P + TFN ++NGLCK    D A      +   G  P+  TY+  I+ L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK    R     + E+      P+ + YT ++   F+ R Y L   I   M   G + D 
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T + A+   GRL EA + + +M   G+ +D ++YNTLI+ +   GK + A  +L  
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKH 605

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLH----------------LEYMNKIGFDSN 356
           M       + +T  IL+  L +    +   L                  E M K    S+
Sbjct: 606 MTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSS 665

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLL 412
             AY  I++   ++ ++D   ++   M+  D       Y+S+V+  CK +  P A  LL 
Sbjct: 666 ARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLC 725

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           S +  G      + + ++ G    G    AK+I   +R
Sbjct: 726 SMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLR 763



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 174/379 (45%), Gaps = 4/379 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E+   ++     LG  P    Y  L+D +C+    +    +LN M + G+ P 
Sbjct: 240 LCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPC 299

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VT  +++    R   +S ++ + + M   G  P+VW+YN+++     +GK  +A  +  
Sbjct: 300 AVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLD 359

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+N+++ G C + + ++A R+ R ++ +G   +  TYN+LI  LCK G
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  +   L   G  PN++T+ T++    +  K+ +    L  M   G   D + Y 
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYS 479

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
             I    K    +E   ++++M+   V+   V+Y  +I+   KE     A  +  +M   
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+T  +   C  G +  A   +  M K G   +  AYN ++D     GK DHA
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599

Query: 377 INVFESM----EVKDSFTY 391
           + + + M     + + FT+
Sbjct: 600 VTILKHMTGVASMPNHFTF 618



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 9/364 (2%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           T+ SL+   +R +L    L L   M   G P P   +YN+L+  L +      A R    
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+     P   TFN ++ G C+ +  D A  +F  +   GF  + V+Y  LI+G C+ GR
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  + +EL      P+  T+  ++K     R+ + GL +L  MK  G+      Y  
Sbjct: 215 VDEALELFREL----EQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++  + +  + +EA   + +M  +G+    V+   ++N YC+EG++  A  + + M+ +G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E + +T+  ++ G C  G +  A   L+ M + G + ++  YN ++     DG I+ A 
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +   ME      D +TY+ ++  LCK  ++  A  L       G+R        V++GL
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 434 RHSG 437
              G
Sbjct: 451 CKGG 454



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 171/409 (41%), Gaps = 22/409 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N+ +   CK  ++++A   + DG+   G+ P+ VT+N +I+  C+   FD   T L +M 
Sbjct: 409 NVLIDALCKTGKVDEA-CSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            AG +PD  TY+  I    +       L  +DEML+  + P   +Y  ++  LF+     
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A R++  M+    +P   T+   +   C       A  +   ++K G + + + YN LI
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITY--------------TTIMKCCFRNRKYKL 235
            G    G+   A  ILK +      PN  T+                 +K     +  +L
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647

Query: 236 G--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
               E+   MK+         Y  ++  F +  RL E T  +  M  D + L+   Y +L
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +N +CK      A+ LL  M   GF  +  ++  L+ G    G    A+     +    +
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEY 767

Query: 354 DSNLEAYNCIVDRLGKDGKID---HAINVFESMEVKDS-FTYSSMVHNL 398
           +++   +  I+D L + G  D     I++ E M+ K S  TY+ +   L
Sbjct: 768 NTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 186/357 (52%), Gaps = 3/357 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C+A +L KAE  I D    G+ P+VVTYN L+D YC+  S    Y     M+
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 70  EA---GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           E     I P+ VT+N+LI G  ++  ++ +    +EM + G+ P++ +YNSL++ L   G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EA  ++  M+   L P   T+N ++NG CK +    A ++F  + K   VP ++T+N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I   CK G +     +   + D G  PN  TY  ++    R +  +   E+L+ M+ K
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I    K  + + A   + +M   G++ + V+YNTL++ YC EGKL+AA
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             +   MEK+  + +  T+ +LI G CK   ++ A   L  M + G + N   Y+ +
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 44/434 (10%)

Query: 28  AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG--------------- 72
           ++++DG R G    ++  +ML+ AY + +     Y    R ++ G               
Sbjct: 118 SLLLDGGRPGATALII--DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSAL 175

Query: 73  --------------------ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
                               I  ++ T+N  I G  R   L+ + D +++M   GI P+V
Sbjct: 176 VKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNV 235

Query: 113 WSYNSLM--HCLF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
            +YN+L+  +C     GK  +A    ++M+   + P   TFN +++G CK+     A + 
Sbjct: 236 VTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKA 295

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  +QK G  P +VTYN LI GLC  G+L  A  +  ++   G  PN +TY  ++    +
Sbjct: 296 FEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK 355

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            +  K   ++   + ++    +   + T+I A+ K G ++E       M+ +G+  ++ +
Sbjct: 356 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           YN LI   C++  L+AA  LL+EME +G + D  T+ ILIDGLCK    + A   L  M 
Sbjct: 416 YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 475

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
            +G   N   YN ++D    +GK+  A+NV   ME +    +  TY+ ++   CK  +L 
Sbjct: 476 NLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLE 535

Query: 406 SASKLLLSCLKSGV 419
           +A+ LL   L+ G+
Sbjct: 536 AANGLLNEMLEKGL 549



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 176/375 (46%), Gaps = 7/375 (1%)

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           L+    +N  L C+ +      + G    + S N L+  L +  K  +   V+++MI   
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK---AGRLR 199
           +     TFNI +NGLC+    + A      ++  G  P +VTYN L+ G CK   AG++ 
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A   +KE+  +   PN +T+ T++    ++       +    M+++G   +   Y ++I
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
                 G+L+EA D  ++MV  G++ +IV+YN LIN +CK+  ++ A  + D++ KQ   
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +  T   +ID  CK G ++        M   G   N+  YNC++  L +   +  A  +
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
              ME K    D  TY+ ++  LCK  +  +A KLL      G++        ++DG   
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495

Query: 436 SGCRREAKKIQSKIR 450
            G  + A  +++++ 
Sbjct: 496 EGKLKAALNVRTRME 510


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    + ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 274 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 333

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+L+  L    + +E   +  
Sbjct: 334 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 393

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   + +HG +P+++TY  +I G CK G
Sbjct: 394 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 453

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN I+YT ++K                            G C
Sbjct: 454 LIDEAVMLLKSMTACGCKPNTISYTIVLK----------------------------GLC 485

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +         R  +A D M QM+  G  L+ +++NTLIN  CK+G +E A  LL +M   
Sbjct: 486 SA-------ERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG    A   L  M   G   N   Y+ I   L ++G+I+  
Sbjct: 539 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A + L   + SG    +S    ++ G
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 658

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ +++
Sbjct: 659 LASEGFVKEAQEMLTEL 675



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 193/400 (48%), Gaps = 4/400 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   R+  A A++ +  R G  P    Y+++++A C+   F +   +L  +   G + 
Sbjct: 168 ALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCAL 227

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV   N ++        +  +L LL ++   G  PDV SYN+++  L    +      + 
Sbjct: 228 DVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELM 287

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M+     P   TFN +++ LC+N   +    +   + +HG  P++  Y  +I G+CK 
Sbjct: 288 EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKE 347

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G L  A  IL  +   G  PN + Y T++K      +++   E+L+ M  K    D   +
Sbjct: 348 GHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF 407

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++  F + G +    + +EQM+  G   D+++Y T+IN +CKEG ++ A +LL  M  
Sbjct: 408 NILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 467

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +  ++TI++ GLC A     A   +  M + G   N   +N +++ L K G ++ 
Sbjct: 468 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 527

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           AI + + M V     D  +YS+++  L KA +   A +LL
Sbjct: 528 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 567



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 171/387 (44%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+    E+   ++   +  G  PD+  Y  +ID  C+    +  + ILNRM 
Sbjct: 302 FNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMP 361

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VV YN+L+ G         + +LL EM +   P D  ++N L+    Q G  D
Sbjct: 362 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 421

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               + + M+     P   T+  ++NG CK    D A+ + + +   G  P  ++Y I++
Sbjct: 422 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 481

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC A R   A  ++ ++   G   N IT+ T++    +    +  +E+L  M   G +
Sbjct: 482 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 541

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y TVI    K G+  EA + +  MV  G+  + + Y+++ +   +EG++     +
Sbjct: 542 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 601

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D ++      D   +  +I  LCK G  + A   L YM   G   N   Y  ++  L  
Sbjct: 602 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 661

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
           +G +  A  +   +  K +     M H
Sbjct: 662 EGFVKEAQEMLTELCSKGALRKHLMKH 688



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 9/379 (2%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           YN ++  YC+    ++      R+  A  + P+  TY  ++        ++ +L +LDEM
Sbjct: 130 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G  P    Y+ ++    + G    A RV +D+            N++LN +C     
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D AL + R L   G  P++V+YN ++KGLC A R    + +++E+      PN +T+ T+
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    RN  ++   E+L+ M   G T D   Y T+I    K G L+ A + + +M + G+
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V YNTL+   C   + E    LL EM  +    D  T  IL+D  C+ G +     
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 399
            LE M + G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++  LC
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 400 KAKRLPSASKLLLSCLKSG 418
            A+R   A  L+   ++ G
Sbjct: 486 SAERWVDAEDLMSQMIQQG 504


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 214/443 (48%), Gaps = 4/443 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C++  +E+A     + +  G+ PD  TY  L++  C+         +L+ M  
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+ P++V Y +L+ G  +    + + D+L EM+  G+ P+   Y++L+  L ++G+   
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGR 401

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++ ++MI   L P T T+N ++ G  +    D A  +   ++  G +P + +Y I+I 
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMIN 461

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G  + A  +L+E+   G  PNA  Y  ++    +     L  E L  M +     
Sbjct: 462 GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHP 521

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I     +GR++EA +Y  Q+   G+  D  +Y+ LI+ YCK G LE A  LL
Sbjct: 522 DLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLL 581

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G + +  T+T L++G  K+ + +     L+ M   G   +   Y  ++  L + 
Sbjct: 582 RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 641

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             ++ A  V   +E    V D   YSS++  LCK   +  A  LL    K G+       
Sbjct: 642 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCY 701

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++DG   SG    A+ +   I
Sbjct: 702 NALIDGFCRSGDISRARNVFDSI 724



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 183/384 (47%), Gaps = 31/384 (8%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+LPDV TY+  I+A+C+   FDA   +   MR    + + VTYN +I+G  R+  +  +
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               +EM++ G+ PD ++Y +LM+ L +  +  EA  +  +M C  L P    +  +++G
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K   T  A  + + +   G  P  + Y+ LI+GLCK G+L  A  +LKE+   G  P+
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  +M+  F+        E+L+ M+  G   + + Y  +I    + G  KEA + +E
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+++G++ +   Y  LI  + KEG +  A   L++M K     D + +  LI GL   G
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 396
            ++ A  +   + K G                                V D FTYS ++H
Sbjct: 538 RMEEAEEYYAQVQKRGL-------------------------------VPDEFTYSGLIH 566

Query: 397 NLCKAKRLPSASKLLLSCLKSGVR 420
             CK   L  A +LL   L SG++
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSGLK 590



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 208/428 (48%), Gaps = 9/428 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +L +A  ++ + I++G+ PD  TYN L+  + Q    D  + +LN MR +GI P+
Sbjct: 393 LCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPN 452

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V +Y  +I G  +N     + +LL+EM+  G+ P+ + Y  L+    + G    A    +
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALE 512

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   ++ P    +N ++ GL      + A   +  +QK G VP+  TY+ LI G CK G
Sbjct: 513 KMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTG 572

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  +L+++ +SG  PNA TYT +++  F++  Y+    IL +M   G   D   Y 
Sbjct: 573 NLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI    +   ++ A   + ++  +G+  D+  Y++LI+  CK   +E A  LLDEM K+
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E     +  LIDG C++G+I  AR   + +   G   N   Y  ++D   K+G I  A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            ++++ M       D+F Y+ +      A  L  A  L       G      A  ++ + 
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-----ANVSLFNT 807

Query: 433 LRHSGCRR 440
           L H  C+R
Sbjct: 808 LVHGFCKR 815



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 146/300 (48%), Gaps = 1/300 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   LEKA+ ++   +  G+ P+  TY  L++ Y +   ++   +IL  M  +G  PD
Sbjct: 568 YCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD 627

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y  +I   +R+  +  +  +L E+ + G+ PD+  Y+SL+  L ++   ++A  +  
Sbjct: 628 NHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLD 687

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P    +N +++G C++     A  +F  +   G VP  VTY  LI G CK G
Sbjct: 688 EMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG 747

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  + KE+ D G AP+A  Y  +   C      +  L +   M  +GY      + 
Sbjct: 748 DITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSL-FN 806

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  F K G+L+E    +  M+   +  +  +   +++ + K GKL  A+ +  E++++
Sbjct: 807 TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 168/400 (42%), Gaps = 34/400 (8%)

Query: 73  ISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           +SPD V+  SLI G   +SL     LD          PP   ++  L   L       +A
Sbjct: 77  LSPDAVS--SLIFGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQA 134

Query: 132 NRVFQDMICG-----------------------DLTPCTATFNIMLNGLCKNRYTDNALR 168
           N +   MI                           +P TA  +++++   K     NA +
Sbjct: 135 NGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQ 194

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAITYTTIMKCC 227
           +   +   G  P     N L+K L +A  +    W LK   + +G  P+  TY+T ++  
Sbjct: 195 VVLMMADLGLAPTRRCCNGLLKDLLRADAMELL-WKLKGFMEGAGILPDVYTYSTFIEAH 253

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            + R +    ++   M+R+    +   Y  +I+   + G ++EA  + E+MV  G+  D 
Sbjct: 254 CKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDA 313

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            +Y  L+N  CK  +L+ A  LLDEM   G + +   +  L+DG  K G    A   L+ 
Sbjct: 314 FTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKE 373

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAK 402
           M   G   N   Y+ ++  L K G++  A  + + M +K     D+FTY+ ++    +  
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM-IKVGLRPDTFTYNPLMQGHFQQH 432

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               A +LL     SG+     +   +++GL  +G  +EA
Sbjct: 433 DKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 1/165 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC++  + +A  +    +  G++P+ VTY  LID  C+       + +   M +
Sbjct: 702 NALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLD 761

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+PD   YN L  G +  + L  +L L +EM   G   +V  +N+L+H   + GK  E
Sbjct: 762 RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQE 820

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
             ++   M+  ++ P   T   +++   K      A R+F  LQ+
Sbjct: 821 TEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 4/396 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++      G   DV  YN L+  YC++   DA   ++  M    + PD
Sbjct: 80  LCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPD 136

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  LI G      +  +L LLD+ML     P V +Y  L+  + +     +A +V  
Sbjct: 137 AYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLD 196

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A ++   L  +GF P+ V+Y  ++KGLC A 
Sbjct: 197 EMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAK 256

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R      +  E+ ++   PN +T+  +++   R    +  +E+L  M   G T +     
Sbjct: 257 RWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCN 316

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI +  K GR+ +A +++  M + G   D +SY T++   C+ G+ E A  LL+EM ++
Sbjct: 317 IVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK 376

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I  A L +E M + G    +  YN +V+     G++D A
Sbjct: 377 NCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA 436

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
           + +F S+  + ++ TY++++  LC A+RL +A++LL
Sbjct: 437 LELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELL 472



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 211/433 (48%), Gaps = 7/433 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A +++ D +R    P VVTY +L++A C+   F     +L+ MR  G +P+
Sbjct: 147 LCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPN 206

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  +  +L+ +   G  PD  SY +++  L    + ++   +F 
Sbjct: 207 IVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFC 266

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TF++++   C+    + A+ +   + +HG        NI+I  +CK G
Sbjct: 267 EMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A   L  +G  G +P+ I+YTT++K   R  +++   E+L+ M RK    +   + 
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G + +A   +EQM   G  + IV+YN L+N +C +G++++A  L + +   
Sbjct: 387 TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP-- 444

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             E +  T+T L+ GLC A  +  A   L  M +     N+  +N +V    + G ++ A
Sbjct: 445 -CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I + + M       +  T+++++  + +      A +LL   +  G+ +      ++VD 
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDV 563

Query: 433 LRHSGCRREAKKI 445
           L       EA ++
Sbjct: 564 LSREDRIEEAVQM 576



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 189/407 (46%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E  E +  + +    +P+ VT++ML+  +C+    +    +L+RM E G + +
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTAN 311

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N +I    +   +  + + L+ M   G  PD  SY +++  L + G+ ++A  +  
Sbjct: 312 TTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLN 371

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TFN  +  LC+    D A+ +   + ++G    +VTYN L+ G C  G
Sbjct: 372 EMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQG 431

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+ +A  +   L      PN ITYTT++       +     E+L+ M +     +   + 
Sbjct: 432 RVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFN 488

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +++ F + G ++EA + ++QM+  G   +++++NTL++   ++   E A  LL  +  +
Sbjct: 489 VLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK 548

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T++ ++D L +   I+ A      +  +G       YN I+  L K  + D A
Sbjct: 549 GISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRA 608

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I+ F  M     + +  TY  ++  L +   L  A  +L      GV
Sbjct: 609 IDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 163/337 (48%), Gaps = 3/337 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI + + CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 311 NTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M      P+ VT+N+ I    +  L+  ++ L+++M E G    + +YN+L++     
Sbjct: 371 NEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQ 430

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D A  +F  + C    P T T+  +L GLC     D A  +   + ++     +VT+
Sbjct: 431 GRVDSALELFNSLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTF 487

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G +  A  +++++ + G  PN IT+ T++     +   +  LE+L  +  
Sbjct: 488 NVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVS 547

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG + D   Y +++    +  R++EA      +   G++   V YN +++  CK  + + 
Sbjct: 548 KGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDR 607

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A      M       ++ T+ ILI+GL + G +K AR
Sbjct: 608 AIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 44/299 (14%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++  LC+   T +A R+ R  +  G   ++  YN L+ G C+ GRL  AR ++  +    
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---P 132

Query: 213 HAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
             P+A TYT +++  C R R     L +L  M R+        Y  ++ A  K     +A
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGD-ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA 191

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +++M   G   +IV+YN +IN  C+E +++ A  +L+ +   GF+ D  ++T ++ G
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKG 251

Query: 332 LCKA-----------------------------------GNIKGARLHLEYMNKIGFDSN 356
           LC A                                   G ++ A   L+ M++ G  +N
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTAN 311

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               N +++ + K G++D A     +M       D+ +Y++++  LC+A R   A +LL
Sbjct: 312 TTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 78/156 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
            L+    N+ V  FC+   +E+A  ++   +  G  P+++T+N L+D   +  + +    
Sbjct: 481 PLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALE 540

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ +   GIS D +TY+S++   +R   +  ++ +   + +MG+ P    YN ++  L 
Sbjct: 541 LLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALC 600

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           +  + D A   F  M+     P  +T+ I++ GL +
Sbjct: 601 KRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAR 636



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L EA   +E+  + G   D+     LI   C+ G+   A  +L   E  G   D + +  
Sbjct: 51  LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---E 384
           L+ G C+ G +  AR  +  M       +   Y  ++  L   G++  A+++ + M   E
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167

Query: 385 VKDS-FTYSSMVHNLCKAKRLPSASKLL 411
            + S  TY+ ++  +CK+     A K+L
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVL 195


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 199/379 (52%), Gaps = 5/379 (1%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N+C C      FC+ ++L  A + +   ++LG  PD+VT+  L++ +C+         + 
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMF 174

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +RM E G  P+VV YN++I G  ++  +  +LDLL+ M   GI PD  +YNSL+  L   
Sbjct: 175 DRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNS 234

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D+A R+   M   ++ P   TFN +++   K      A  ++  + +    P++VTY
Sbjct: 235 GRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTY 294

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++LI GLC   RL  A  +   +   G  P+ +TY+ ++    +++K + G+++   M +
Sbjct: 295 SLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   +   Y  +I  + + G+L  A +  + MV  GV  +I++YN L++  C  GK+E 
Sbjct: 355 RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK 414

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A ++L +M+K G + D  T+ I+I G+CKAG +  A      +N  G   ++  Y  ++ 
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474

Query: 366 RLGKDGKIDHAINVFESME 384
            L K G    A  +F  M+
Sbjct: 475 GLYKKGLRGEADALFRKMK 493



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 202/416 (48%), Gaps = 4/416 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +  ++ L+ A  +   +D    +  +M+  GI  ++ T N L+    R S LS +L 
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +M+++G  PD+ ++ SL++   +  +  +A  +F  M+     P    +N +++GLC
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K++  DNAL +   ++  G  P+ VTYN LI GLC +GR   A  ++  +      P+  
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+  ++  C +  +     E+   M R+    D   Y  +I       RL EA      M
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V+ G   D+V+Y+ LIN YCK  K+E    L  EM ++G   +  T+T+LI G C+AG +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL 377

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A    ++M   G   N+  YN ++  L  +GKI+ A+ +   M+      D  TY+ +
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNII 437

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  +CKA  +  A  L  S    G+        A++ GL   G R EA  +  K++
Sbjct: 438 IRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMK 493



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 8/313 (2%)

Query: 9   LLNICVCTFCKANRLEKAEAII----IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           + N  +   CK+ +++ A  ++    +DGIR    PD VTYN LI   C    +D    +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIR----PDAVTYNSLISGLCNSGRWDDATRM 243

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++ M +  I PDV T+N+LI    +   +S + +L +EM+   + PD+ +Y+ L++ L  
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + DEA ++F  M+     P   T++I++NG CK++  ++ +++F  + + G V   VT
Sbjct: 304 YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y +LI+G C+AG+L  A  I K +   G  PN ITY  ++     N K +  L IL+ M+
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           + G   D   Y  +I    K G + +A D    +   G+  DI +Y  ++    K+G   
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRG 483

Query: 305 AAYLLLDEMEKQG 317
            A  L  +M++ G
Sbjct: 484 EADALFRKMKEDG 496



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 166/344 (48%), Gaps = 4/344 (1%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y  ++    R   L  SLDL   M++    P +  ++ L+  + ++ K D    +++ M 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              +     T NI+LN  C+      AL     + K G  P++VT+  L+ G C+  R+ 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A ++   + + G+ PN + Y TI+    ++++    L++L+ M+  G   D   Y ++I
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           +     GR  +AT  +  M    +  D+ ++N LI+   KEG++  A  L +EM ++  +
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+++LI GLC    +  A     +M   G   ++  Y+ +++   K  K++H + +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 380 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           F  M     V+++ TY+ ++   C+A +L  A ++    +  GV
Sbjct: 349 FCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  +RL++AE +    +  G  PDVVTY++LI+ YC+    + G  +   M + G+  +
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY  LI G  R   L+ + ++   M+  G+PP++ +YN L+H L   GK ++A  +  
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM    +     T+NI++ G+CK     +A  ++  L   G  P++ TY  ++ GL K G
Sbjct: 421 DMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480

Query: 197 RLRTARWILKELGDSGHAPN 216
               A  + +++ + G  PN
Sbjct: 481 LRGEADALFRKMKEDGILPN 500



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 40/244 (16%)

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           R+ Y+  G  Y  ++   ++  +L ++ D    MV       I  ++ L++   K  K +
Sbjct: 40  RRAYS-GGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98

Query: 305 AAYLLLDEMEKQGFECDKYTHTILI----------------------------------- 329
               L ++M+  G   +  T  IL+                                   
Sbjct: 99  VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL 158

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---- 385
           +G C+   I  A    + M ++G++ N+  YN I+D L K  ++D+A+++   MEV    
Sbjct: 159 NGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR 218

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D+ TY+S++  LC + R   A++++    K  +        A++D     G   EA+++
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278

Query: 446 QSKI 449
             ++
Sbjct: 279 YEEM 282


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 209/420 (49%), Gaps = 12/420 (2%)

Query: 11  NICVCTFCK--ANRLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N  +   C+   + L +A ++++D  R       P+ V+Y  ++   C          +L
Sbjct: 87  NTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALL 146

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+ +G+  DVVTY +LI G    S L  +L+LLDEM   G+ P+V  Y+ L+    + 
Sbjct: 147 RSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRS 206

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  +  +VF+DM    + P    F  +++ LCK   T  A ++   + + G  P +VTY
Sbjct: 207 GRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTY 266

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+LI  LCK G +R A  + KE+ D G AP+ +TY T++       +    +  L  M  
Sbjct: 267 NVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMI- 325

Query: 246 KGYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +G T    D   + +VI    KIGR+ +A    E M   G   ++V+YN LI  + +  K
Sbjct: 326 QGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHK 385

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A  L+DE+   G E D +T++ILI+G  K   +  A   L  M + G  + L  Y  
Sbjct: 386 VKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIP 445

Query: 363 IVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++  + + G ++ A+ +F  M+     D+  YS+M+H  CK+  + +  +L+   L  G+
Sbjct: 446 LLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGL 505



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 201/397 (50%), Gaps = 6/397 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C++ R +    +  D  R G+ PDV+ +  LID  C+         + + M + G+ P+
Sbjct: 203 YCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPN 262

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    +   +  +L L  EM + G+ PDV +YN+L+  L  + + DEA    +
Sbjct: 263 VVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLE 322

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +MI GD  + P   TFN +++GLCK      A+++   + + G +  LVTYN LI G  +
Sbjct: 323 EMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLR 382

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             +++ A  ++ EL  SG  P++ TY+ ++    +  +     + L  M+++G   + F 
Sbjct: 383 VHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFH 442

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++AA  + G ++ A     +M      LD ++Y+T+I+  CK G ++    L+ +M 
Sbjct: 443 YIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDML 501

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   D  T+++LI+   K G+++ A   L+ M   GF  ++  ++ ++     +G+ D
Sbjct: 502 DEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTD 561

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
             + +   M  K+      ++  +    RLP  + LL
Sbjct: 562 KVLKLIHEMRAKNVAFDPKIISTII---RLPQQTPLL 595



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 46/356 (12%)

Query: 111 DVWSYNSLMHCLFQLGKPD--EANRVFQDM---ICGDLTPCTATFNIMLNGLCKNRYTDN 165
           D  SYN+++  L + G     +A  +  DM         P   ++  ++ GLC +R T  
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+ + R +Q  G   ++VTY  LI+GLC A  L  A  +L E+  SG  PN + Y+ +++
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              R+ +++   ++   M R+G   D   +  +I    K G+  +A    + MV  G++ 
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI---------------- 329
           ++V+YN LIN  CKEG +  A  L  EM+ +G   D  T+  LI                
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 330 ---------------------DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
                                 GLCK G +  A    E M + G   NL  YN ++    
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +  K+  A+N+ + + +     DSFTYS +++   K   +  A K L +  + G++
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIK 437



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 9/242 (3%)

Query: 179 VPELVTYNILIKGLCKAG--RLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKY 233
           V + V+YN ++  LC+ G   LR AR +L ++    H    PNA++YTT+M+    +R+ 
Sbjct: 80  VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              + +L +M+  G   D   Y T+I        L  A + +++M   GVQ ++V Y+ L
Sbjct: 140 GEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCL 199

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +  YC+ G+ +    + ++M ++G + D    T LID LCK G    A    + M + G 
Sbjct: 200 LRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGL 259

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
           + N+  YN +++ L K+G +  A+ + + M+ K    D  TY++++  L     +  A  
Sbjct: 260 EPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMS 319

Query: 410 LL 411
            L
Sbjct: 320 FL 321



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 5/180 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           +I +  F K   +++AE  +    + G+  ++  Y  L+ A CQ    +    + N M +
Sbjct: 409 SILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK 468

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  D + Y+++I GA ++  +     L+ +ML+ G+ PD  +Y+ L++   +LG  +
Sbjct: 469 NCGL--DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLE 526

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--GFVPELVTYNI 187
           EA RV + M      P  A F+ ++ G      TD  L++   ++     F P++++  I
Sbjct: 527 EAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 215/443 (48%), Gaps = 8/443 (1%)

Query: 11  NICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +   C  NR ++A      ++ D  R G  PDVV+Y  +I+   +    D  Y + +
Sbjct: 171 NILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFD 230

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + G+SP+ +TYN L+ G   +     ++ +  +M   G+ PDV +YN+LM  L + G
Sbjct: 231 EMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNG 290

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA +VF  M+     P ++ +  +L+G     Y     ++   + ++G  P+   +N
Sbjct: 291 RSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFN 350

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI    K G +  A     ++   G  PN +TY T+M    R  K    +     +  +
Sbjct: 351 ILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE 410

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T +G  + T+I       +  +A +   +M+  G+  + + +NTL+N  CKEG +  A
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + D M +   +CD  T+T LIDG C  G +  A   LE M   G   N   YN I++ 
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIING 530

Query: 367 LGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K+G+I+ A ++F  M  K        YS+++H L + +R+ +A +L L  +K G+++ 
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590

Query: 423 KSAQKAVVDGLRHSGCRREAKKI 445
                 ++ GL  + C  +A ++
Sbjct: 591 IGTYNIILQGLCQNNCTDDALRM 613



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 185/407 (45%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C + + ++A  I     R GV PDVVTYN L+   C+         + + M + G  PD
Sbjct: 251 YCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPD 310

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y +L+ G      L     LLD M+  G  PD + +N L+    + G  DEA   F 
Sbjct: 311 SSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFS 370

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   T+  +++ LC+    D+A+  F  L   G  P  V +  LI GLC   
Sbjct: 371 KMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACD 430

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  +  E+   G  PN I + T++    +         I   M R     D   Y 
Sbjct: 431 KWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYT 490

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  +   G++ EAT  +E MV DGV+ + V+YNT+IN YCK G++E A  L  +M  +
Sbjct: 491 TLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASK 550

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G       ++ ++ GL +   I  A+    +M K G    +  YN I+  L ++   D A
Sbjct: 551 GVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA 610

Query: 377 INVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + +F ++ + D    + T++ M+  L K  R   A  L  S L  G+
Sbjct: 611 LRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGL 657



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 207/438 (47%), Gaps = 48/438 (10%)

Query: 41  DVVTYNMLIDA----------------------YCQFVSF--------------DAGYTI 64
           D+ TY+++I                          Q ++F              DA    
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML----EMGIPPDVWSYNSLMH 120
           L RM   G +P+  +YN L+ G    +    +L LL  M+      G PPDV SY ++++
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L + G+ D+A  +F +M+   ++P   T+N +L+G C +     A+ +FR + + G  P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL-EI 239
           ++VTYN L+  LCK GR   AR +   +   GH P++  Y T++   +    Y + + ++
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH-GYATEGYLVQMHQL 333

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L  M R G   D + +  +I A+ K G + EA     +M   G+  +IV+Y T+++  C+
Sbjct: 334 LDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCR 393

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLE 358
            GK++ A    D +  +G   +      LI GLC      K   L +E + + G   N  
Sbjct: 394 VGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR-GICPNTI 452

Query: 359 AYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            +N +++ L K+G +  A N+F+ M   +V+ D  TY++++   C   ++  A+KLL   
Sbjct: 453 FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGM 512

Query: 415 LKSGVRILKSAQKAVVDG 432
           +  GV+  +     +++G
Sbjct: 513 VLDGVKPNEVTYNTIING 530



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 145/292 (49%), Gaps = 2/292 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   CK   + +A+ I    +R+ V  DV+TY  LID YC     D    +L
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLL 509

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G+ P+ VTYN++I G  +N  +  +  L  +M   G+ P +  Y++++H LFQ 
Sbjct: 510 EGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQT 569

Query: 126 GKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            +   A  ++  MI CG   P   T+NI+L GLC+N  TD+ALRMF  L    F  +  T
Sbjct: 570 RRIAAAKELYLWMIKCGIKLP-IGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRT 628

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +   L   G  PN +TY  +MK        +   ++  +++
Sbjct: 629 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLE 688

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           + G T D      ++    + G +++A  Y+ ++  +   L+  +  +L+ L
Sbjct: 689 KNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFL 740



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 49/383 (12%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           NS ++   R S  + +L L + M       D+ +Y+ ++ C  + G  D A      +I 
Sbjct: 70  NSALSAVARESP-AVALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIR 124

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRM-FRGLQKHGFVPELVTYNILIKGLC------ 193
              T    TF+ +L GLC ++ T +A+ +  R +   G  P   +YNIL+KGLC      
Sbjct: 125 TGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQ 184

Query: 194 ---------------------------------KAGRLRTARWILKELGDSGHAPNAITY 220
                                            + G+L  A  +  E+ D G +PN ITY
Sbjct: 185 QALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITY 244

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++     + K K  + I   M R G   D   Y T++    K GR  EA    + MV 
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G + D   Y TL++ Y  EG L   + LLD M + G + D Y   ILI    K G +  
Sbjct: 305 KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDE 364

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
           A L    M + G   N+  Y  ++D L + GK+D A++ F+ +       +   + +++H
Sbjct: 365 AMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIH 424

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            LC   +   A +L +  +  G+
Sbjct: 425 GLCACDKWDKAEELAVEMIGRGI 447



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 175/405 (43%), Gaps = 36/405 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +  + K   +++A        + G+ P++VTY  ++DA C+    D   +  +R+
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++P+ V + +LI G         + +L  EM+  GI P+   +N+L++ L + G  
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  +F  M+  D+     T+  +++G C +   D A ++  G+   G  P  VTYN +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG- 247
           I G CK GR+  A  + +++   G  P  + Y+TI+   F+ R+     E+   M + G 
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587

Query: 248 ------YTFDGFGYCT----------------------------VIAAFVKIGRLKEATD 273
                 Y     G C                             +I A +K GR  EA D
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               ++  G+  ++V+Y  ++    ++G LE    L   +EK G   D      L+  L 
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLP 707

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           + G ++ A ++L  +++  F         +V  L   GK D  IN
Sbjct: 708 QKGEVRKAGVYLSKIDENNFSLEASTAESLV-FLVSSGKYDQHIN 751


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 213/422 (50%), Gaps = 4/422 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   C   +L++A       I LG   D V+Y  LI+  C+     A   +L
Sbjct: 128 TTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQML 187

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            ++    ++ DVV YN +I    ++  +S +  L  EM+   I PDV ++NSL+     +
Sbjct: 188 KKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVV 247

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  EA  +F +M+  ++ P   TF+I+++ LCK+     A  M   + K G +P++VTY
Sbjct: 248 GQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTY 307

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + L+ G C    +  A+ +   +   G AP+A +Y  ++    + +     L +   M  
Sbjct: 308 SSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCC 367

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG   D   Y ++I    K+GR+  A   +++M  +G+  DI++YN+LI++ CK   ++ 
Sbjct: 368 KGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDK 427

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L+ +++ QG +   YT+ ILIDGLCK G +K A+   + +   G+  N   YN +++
Sbjct: 428 AIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMIN 487

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L K+G  + A  +   ME    + D+ TY +++  L +      A KLL   +  G+ +
Sbjct: 488 GLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547

Query: 422 LK 423
            K
Sbjct: 548 CK 549



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 209/449 (46%), Gaps = 41/449 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P +VT+N+L++ YC        ++I  ++ + G  P  +T+N+LI G   N  L  +
Sbjct: 89  GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEA 148

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP---------------------------- 128
           L   D ++ +G   D  SY +L++ L ++G+                             
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208

Query: 129 -------DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
                   +A +++ +MI   ++P   TFN ++ G C       A  +F  +      P+
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEIL 240
           + T++IL+  LCK G +  A+ +L  +   G  P+ +TY+++M   C  N   K    + 
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNK-AKHVF 327

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S M R G       Y  +I    KI  + EA    ++M   G+  D V+YN+LI+  CK 
Sbjct: 328 STMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL 387

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G++  A+ L+DEM   G   D  T+  LID LCK  +I  A   ++ +   G   ++  Y
Sbjct: 388 GRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTY 447

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++D L K G++ +A +VF+ + +K    +++TY+ M++ LCK      A  LL     
Sbjct: 448 NILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMEN 507

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +G+       + ++  L       +A+K+
Sbjct: 508 NGIIPDAVTYETIIRALFRKDENEKAEKL 536



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 182/361 (50%), Gaps = 6/361 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATR--NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +RM     +P +V +N ++    +  N+  + ++ L  ++   GI P + ++N L++C 
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             LG+   A  +F  ++     P T TFN ++NG+C N     AL     +   GF  + 
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V+Y  LI GLCK G  R A  +LK++       + + Y  I+    +++      ++ S 
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  K  + D   + ++I  F  +G+LKEA     +MV   +  D+ +++ L++  CK+G 
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A  +L  M KQG   D  T++ L+DG C    +  A+     M+++G   +  +YN 
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++ LGK   +D A+++F+ M  K    D+ TY+S++  LCK  R+  A +L+     +G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 419 V 419
           +
Sbjct: 405 I 405


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 189/375 (50%), Gaps = 4/375 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV TY M+ID+ C+         + + M  AGI PDVV Y+SL+ G  R   L  +L+  
Sbjct: 145 DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 204

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM   GI  DV++YNSL+H L + G   E       M+    +P   TF I+++GLCK 
Sbjct: 205 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A ++   +   G  P+++TYN L+ GLC  G+L  A  + + L D G   N  +Y
Sbjct: 265 GKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 324

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    +++K      +   M+ KG       Y T+I A  + GR++ A     +M T
Sbjct: 325 NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 384

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G  L + +Y  L++  CK G LE A  L   ++K   + +    +IL+DG+C+AG ++ 
Sbjct: 385 CGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A    + ++K G + +  AYN +++ L   G +  A+ +   ME K    DS T++ ++ 
Sbjct: 445 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 504

Query: 397 NLCKAKRLPSASKLL 411
           NL K   +  A +LL
Sbjct: 505 NLLKENEIHEAIQLL 519



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 198/409 (48%), Gaps = 6/409 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK     +A  +  + I  G+LPDVV Y+ L+D  C+F            M   GIS 
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 214

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV TYNSLI G +R  L       L+ M++ G  PD +++  L+  L + GK  EA ++ 
Sbjct: 215 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M      P   T+N ++NGLC     ++A ++F  L   G    + +YNILI G CK 
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 334

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            ++  A  + +E+   G  P+ +TY T++    ++ + +   ++   M+  G       Y
Sbjct: 335 QKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 394

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           C ++    K G L+EA D  + +     + +I  ++ L++  C+ GKLE A+   DE+ K
Sbjct: 395 CVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISK 454

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G E D   + ILI+GLC  G +  A   L  M + G   +   +N I+  L K+ +I  
Sbjct: 455 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 514

Query: 376 AINVFESMEVKDSFTYSSMVHN--LCKAKRLPSASKLLLS---CLKSGV 419
           AI + E M  ++ F+    V +  LC A   P     L+S    L+ GV
Sbjct: 515 AIQLLEEMRNRN-FSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 207/416 (49%), Gaps = 5/416 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ G  PD VT   L+              + + M E G+  D  TY  LI G  +    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++ L ++M +     DV++Y  ++  L + G   EA  +F +MI   + P    ++ +
Sbjct: 129 GLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++GLC+      AL  F+ ++  G   ++ TYN LI GL +AG  +   W L  + D G 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P+A T+T ++    +  K     +IL  M  KG   D   Y T++     +G+L++AT 
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E +   G++L++ SYN LIN YCK+ K++ A+ L +EM  +G +    T+  LI  LC
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF- 389
           ++G ++ A+     M   G    L  Y  ++D L K+G ++ AI++F+S+   E K +  
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +S ++  +C+A +L  A K      K+G+     A   +++GL + G   EA K+
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 201/418 (48%), Gaps = 15/418 (3%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           + V T  K   +E     I D ++L       G+  D  TY +LI+  C+         +
Sbjct: 78  VTVTTLVKGVWMENG---IPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             +M+      DV TY  +I    ++ + + +LD+  EM+  GI PDV  Y+SLM  L +
Sbjct: 135 HEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+  EA   F++M    ++    T+N +++GL +             +   GF P+  T
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           + ILI GLCK G++  A+ IL+ +   G  P+ +TY T+M       + +   ++  ++ 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   + F Y  +I  + K  ++ EA    E+M   G++   V+YNTLI   C+ G++ 
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L  EM+  G      T+ +L+DGLCK G+++ A    + + K     N+E ++ ++
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D + + GK++ A   F+ +       D+  Y+ +++ LC    L  A KLL    + G
Sbjct: 434 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 179/352 (50%), Gaps = 7/352 (1%)

Query: 104 LEMGIPPDVWSYNSLMHCLF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           L+ G  PD  +  +L+  ++ + G PD A ++F +M    L     T+ I++NGLCK R 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPD-AVQLFDEMTEKGLFGDAKTYGILINGLCKARK 127

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           T  A+++   + K     ++ TY ++I  LCK G    A  +  E+  +G  P+ + Y++
Sbjct: 128 TGLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           +M    R  + K  LE    M+ +G + D + Y ++I    + G  KE T ++  MV  G
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              D  ++  LI+  CKEGK+  A  +L+ M  +G E D  T+  L++GLC  G ++ A 
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
              E +   G   N+ +YN +++   KD KID A  +FE M  K     + TY++++  L
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           C++ R+ +A KL +     G  +  S    ++DGL  +G   EA  +   I+
Sbjct: 367 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 37/321 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +   CK  ++ +A+ I+      G  PD++TYN L++  C     +    +   + 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + GI  +V +YN LI G  ++  +  +  L +EM   G+ P   +YN+L+  L Q G+  
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A ++F +M  CG     + T+ ++L+GLCKN + + A+ +F+ ++K    P +  ++IL
Sbjct: 374 TAQKLFVEMQTCGQFLKLS-TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSIL 432

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G+C+AG+L  A     E+  +G  P+ I Y  ++                        
Sbjct: 433 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN----------------------- 469

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                G C         G L EA   + QM   G   D +++N +I    KE ++  A  
Sbjct: 470 -----GLCNK-------GMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517

Query: 309 LLDEMEKQGFECDKYTHTILI 329
           LL+EM  + F  D+   ++L+
Sbjct: 518 LLEEMRNRNFSPDEAVTSMLL 538



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 120/244 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+    NI +  +CK  ++++A  +  +    G+ P  VTYN LI A CQ         
Sbjct: 318 KLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQK 377

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M+  G    + TY  L+ G  +N  L  ++DL   + +    P++  ++ L+  + 
Sbjct: 378 LFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMC 437

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK +EA + F ++    L P T  +NI++NGLC       A+++   +++ G +P+ +
Sbjct: 438 RAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSI 497

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N++I+ L K   +  A  +L+E+ +   +P+    + ++     + ++   L  L   
Sbjct: 498 TFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNA 557

Query: 244 KRKG 247
            +KG
Sbjct: 558 LQKG 561



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 41/98 (41%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C    L +A  ++      G LPD +T+N++I    +         +L  MR 
Sbjct: 465 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 524

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
              SPD    + L+  A+ +     +L  L   L+ G+
Sbjct: 525 RNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 203/414 (49%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV  YN +I  +C+    +A   +LNRM+  G  PD+VTYN +I        L  +L +
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD++L     P V +Y  L+      G  +EA ++ ++M+   L P   T+N ++ G+CK
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               + A  +   L   G  P++++YNIL++     G+      ++ E+   G  PN +T
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R  +    + +L  M  K  T D + Y  +I+A  K GRL  A   M+ M+
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           ++G   DIV+YNT++   CK G    A  + +++   G   +  ++  +I  L   G+  
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A   +  M   G D +   YN ++  L +DG ++ AI + + ME         +Y+ ++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +R+  A  +    ++ G R  ++    +++G+  +G R EA ++ + +
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 192/418 (45%), Gaps = 35/418 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG--------- 61
           N  +  FCK NR+E A  ++      G LPD+VTYN++I + C                 
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200

Query: 62  ---------YTIL-----------------NRMREAGISPDVVTYNSLIAGATRNSLLSC 95
                    YTIL                   M   G+ PD+ TYN++I G  +  ++  
Sbjct: 201 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 260

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           + +L+  +   G  PDV SYN L+      GK DE  ++  +M      P   T++I+++
Sbjct: 261 AAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 320

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC+    D A+ + + + +    P+  +Y+ LI  LCK GRL  A  I+  +  +G  P
Sbjct: 321 SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLP 380

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + Y TI+    +N      LEI + ++  G   +   Y T+I+A    G    A   +
Sbjct: 381 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 440

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M++ GV  D ++YN+LI+  C++G +E A  LLD+ME+ GF     ++ I++ GLCK 
Sbjct: 441 PAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 500

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
             I  A      M + G   N   Y  +++ +G  G    A+ +  S+  +D  +  S
Sbjct: 501 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 558



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 40/337 (11%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------------------- 183
           +LN  CK    + +L     L   G+ P+++                             
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 184 -----TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                 YN +I G CK  R+  A  +L  +   G  P+ +TY  ++      RK  L L+
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  +           Y  +I A +  G + EA   +E+M+  G+  D+ +YN +I   C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNL 357
           KEG +E A  L+  +  +G + D  ++ IL+      G   +G +L  E  ++ G + N 
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR-GCEPNK 312

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
             Y+ ++  L + G+ID AI+V + M  K    D+++Y  ++  LCK  RL  A  ++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            + +G          ++  L  +G   +A +I +K+R
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 409


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 197/375 (52%), Gaps = 5/375 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  ++  A   + D ++  ++PD+++YN LI  +C+  +    + +L+ +R 
Sbjct: 346 NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +S ++VTYN+LI G  R   L  +L L ++M+  GI PDV +Y  L++   +LG    
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M+   L P    +   + G  K   T  A ++   +   GF P+++TYN+ + 
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G L  A  +L+++   GH P+ +TYT+ M     N   + G EI   M  +G T 
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I A    GRL  A  Y  +M   GV  ++++YN LIN +CK  K++ A    
Sbjct: 586 TVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFF 645

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK-IGFDSNLEAYNCIVDRLG 368
            EM+++G   +KYT+TILI+  C  G  + A RL+ + + K I  DS    +  ++ +L 
Sbjct: 646 IEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSC--THGALLKKLD 703

Query: 369 KDGKIDHAINVFESM 383
           KD K+  A+   ES+
Sbjct: 704 KDYKV-QAVQFIESL 717



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 211/455 (46%), Gaps = 9/455 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +FCK   +++A  ++      G  P  VT+N+LI+   +         ++  M +
Sbjct: 241 NTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAK 300

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG+     TYN LI G  +  LL  +L L +EM+  G+ P V S+N++M+   + GK  +
Sbjct: 301 AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSD 360

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +   DM+  +L P   ++N ++ G C+      A  +   L+       +VTYN LI 
Sbjct: 361 ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLID 420

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L TA  + +++ + G  P+ +TYT ++    +     +  E    M   G   
Sbjct: 421 GLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAP 480

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y   I   +K+G   +A    E+M+T G   D+++YN  +N  CK G LE A  LL
Sbjct: 481 DQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELL 540

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M + G   D  T+T  +    + G+++  R     M   G    +  Y  ++     +
Sbjct: 541 QKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALN 600

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G++D A+  F  M+    V +  TY+ +++  CK +++  A K  +   + G+   K   
Sbjct: 601 GRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660

Query: 427 KAVVD-----GLRHSGCRREAKKIQSKIRMAKISH 456
             +++     G      R  A+ +  +IR    +H
Sbjct: 661 TILINENCNMGKWQEALRLYAQMLGKRIRPDSCTH 695



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 179/386 (46%), Gaps = 4/386 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M      PDV   N ++      +LL  +L++   M E GI P V +YN+++H   
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+   A  +   M      P   TFN+++NGL K      A  + + + K G      
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI G CK G L  A  + +E+   G +P   ++ TIM    +  K     + LS M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            +K    D   Y T+I  F ++G + EA   ++++    +  +IV+YNTLI+  C+ G L
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L ++M  +G   D  T+T+L++G CK GN+  A+   + M  +G   +  AY   
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    K G    A  + E M  K    D  TY+  V+ LCK   L  A +LL   ++ G 
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
                   + +     +G  RE ++I
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREI 574



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 179/390 (45%), Gaps = 6/390 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R   LPDV   N ++              +   M E GI P V TYN+++    +   +
Sbjct: 194 MRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEV 253

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +LDL+ +M E G  P   ++N L++ L + G+  +A  + Q+M    L     T+N +
Sbjct: 254 QRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPL 313

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G CK      AL ++  +   G  P + ++N ++ G CK G++  AR  L ++     
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ I+Y T++    R         +L  ++ +  +F+   Y T+I    ++G L+ A  
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALK 433

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E M+  G+  D+V+Y  L+N  CK G +  A    DEM   G   D++ +T  I G  
Sbjct: 434 LKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGEL 493

Query: 334 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
           K G+  K  +L  E + K GF  ++  YN  V+ L K G ++ A  + + M     V D 
Sbjct: 494 KLGDTAKAFKLQEEMLTK-GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDH 552

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            TY+S +H   +   L    ++    L  G
Sbjct: 553 VTYTSFMHAHMENGHLREGREIFYDMLSRG 582



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 163/357 (45%), Gaps = 39/357 (10%)

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + ++M+     PDV + N ++  L       +A  V++ M    + P   T+N ML+ 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK      AL +   +Q+ G  P  VT+N+LI GL K G L+ A+ +++E+  +G   +
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++  C                          GYC       K G L EA    E
Sbjct: 307 PYTYNPLI--C--------------------------GYC-------KKGLLVEALALWE 331

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MVT GV   + S+NT++  +CKEGK+  A   L +M K+    D  ++  LI G C+ G
Sbjct: 332 EMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLG 391

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           NI  A + L+ +       N+  YN ++D L + G ++ A+ + E M  +    D  TY+
Sbjct: 392 NIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT 451

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +V+  CK   +  A +     L  G+   + A  A + G    G   +A K+Q ++
Sbjct: 452 VLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 99/209 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   CK   LE+A  ++   IR G +PD VTY   + A+ +      G  I   M  
Sbjct: 521 NVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLS 580

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P VVTY  LI     N  L  ++    EM E G+ P+V +YN L++   ++ K D+
Sbjct: 581 RGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQ 640

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A + F +M    + P   T+ I++N  C       ALR++  +      P+  T+  L+K
Sbjct: 641 ACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAIT 219
            L K  +++  ++I   + D     +A T
Sbjct: 701 KLDKDYKVQAVQFIESLILDGDRTIDANT 729


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 213/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R  + + ++ + +R+G  P+VVT+N LI   C+   F+  + +L +M + G +PD
Sbjct: 235 LCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPD 294

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y +++ G  +   L  + ++LD M   G+ P+V  YN+++  L    + ++A  +  
Sbjct: 295 IRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLA 354

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N      + +   + +HG VP+++TY  +I G CK G
Sbjct: 355 EMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEG 414

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN I+YT ++K                            G C
Sbjct: 415 LIDEAVMLLKSMAACGCRPNTISYTIVLK----------------------------GLC 446

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +         R  +A D M QM+  G   + V++NT+IN  CK+G +E A  LL +M   
Sbjct: 447 SA-------ERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG    A   L  M   G   N   Y+ I   L K+G+I+  
Sbjct: 500 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRV 559

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A + L   + SG    +S    ++ G
Sbjct: 560 IQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ +++
Sbjct: 620 LASEGFVKEAQEMLTEL 636



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 195/445 (43%), Gaps = 47/445 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +C+A +L  A  +      + V P+  TY  ++ A C         ++L+ MR 
Sbjct: 87  NAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 71  AGISPDVVTYNSLIAGATRNSLL----------------SCSLDL--------------- 99
            G +P    Y+ ++  A                       C+LD+               
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 100 -LDEMLEM--------GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
            +DE L +        G  PDV SYN+++  L    +      + ++M+     P   TF
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N ++  LC+N   +   ++   +  HG  P++  Y  ++ G+CK G L  A  IL  +  
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  PN + Y T++K      +++   E+L+ M       D   +  ++  F + G +  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
             + +EQM+  G   D+++Y T+IN +CKEG ++ A +LL  M   G   +  ++TI++ 
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----K 386
           GLC A     A   +  M + G   N   +N +++ L K G ++ AI + + M +     
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSP 503

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           D  +YS+++  L KA +   A +LL
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELL 528



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 16/385 (4%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           YN ++  YC+     AG     R   A   + P+  TY  ++        ++ +L +LDE
Sbjct: 86  YNAMVSGYCR-----AGQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDE 140

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPD---EANRVFQDMICGDLTPCTATFNIMLNGLC- 158
           M   G  P    Y+ ++      G       A RV QD+            N++LN +C 
Sbjct: 141 MRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCD 200

Query: 159 KNRYTDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           +    D ALR+ R L    G  P++V+YN ++KGLC A R    + +++E+   G  PN 
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +T+ T++    RN  ++   ++L+ M   G T D   Y TV+    K G L+ A + +++
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M + G++ ++V YNT++   C   + E A  LL EM       D  T  IL+D  C+ G 
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSS 393
           +      LE M + G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ 
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSG 418
           ++  LC A+R   A  L+   ++ G
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQG 465



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 143/379 (37%), Gaps = 82/379 (21%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N M++G C+     +A R+   +      P   TY  +++ LC  GR+  A  +L E+ 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 210 DSGHAPNAITYTTIMK-CCFR--NRKYKLGLEILSAMKRKGYTFD--------------- 251
             G AP    Y  I++  C R     ++  + +L  +  +G   D               
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 252 ---------------GFG-------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
                           FG       Y  V+       R     D ME+MV  G   ++V+
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           +NTLI   C+ G  E  + +L +M   G   D   +  ++DG+CK G+++ A   L+ M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 350 KIGFDSNLEAYNCI-----------------------------------VDRLGKDGKID 374
             G   N+  YN +                                   VD   ++G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
             I + E M     V D  TY+++++  CK   +  A  LL S    G R    +   V+
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 431 DGLRHSGCRREAKKIQSKI 449
            GL  +    +A+ + S++
Sbjct: 443 KGLCSAERWVDAEDLMSQM 461


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 211/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    + ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPD 296

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+L+  L    + +E   +  
Sbjct: 297 IRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   +  HG +P+++TY  +I G CK G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEG 416

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN I+YT ++K                            G C
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLK----------------------------GLC 448

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +         R  +A D M QM+  G  L+ +++NTLIN  CK+G +E A  LL +M   
Sbjct: 449 SA-------ERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG    A   L  M   G   N   Y+ I   L ++G+I+  
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A + L   + SG    +S    ++ G
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ +++
Sbjct: 622 LASEGFVKEAQEMLTEL 638



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 194/400 (48%), Gaps = 4/400 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   R+  A A++ +  R G  P    Y+++++A C+   F +   +L  +   G + 
Sbjct: 131 ALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCAL 190

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV   N ++        +  +L LL ++   G  PDV SYN+++  L    +      + 
Sbjct: 191 DVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELM 250

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M+     P   TFN +++ LC+N   +    +   + +HG  P++  Y  +I G+CK 
Sbjct: 251 EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKE 310

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G L+ A  IL  +   G  PN + Y T++K      +++   E+L+ M  K    D   +
Sbjct: 311 GHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF 370

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++  F + G +    + +EQM+  G   D+++Y T+IN +CKEG ++ A +LL  M  
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +  ++TI++ GLC A     A   +  M + G   N   +N +++ L K G ++ 
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           AI + + M V     D  +YS+++  L KA +   A +LL
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 169/387 (43%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+    E+   ++      G  PD+  Y  +ID  C+       + ILNRM 
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP 324

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VV YN+L+ G         + +LL EM +   P D  ++N L+    Q G  D
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               + + M+     P   T+  ++NG CK    D A+ + + +   G  P  ++Y I++
Sbjct: 385 RVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC A R   A  ++ ++   G   N IT+ T++    +    +  +E+L  M   G +
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y TVI    K G+  EA + +  MV  G+  + + Y+++ +   +EG++     +
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 564

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D ++      D   +  +I  LCK G  + A   L YM   G   N   Y  ++  L  
Sbjct: 565 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
           +G +  A  +   +  K +     M H
Sbjct: 625 EGFVKEAQEMLTELCSKGALRKHLMKH 651



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 179/379 (47%), Gaps = 9/379 (2%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           YN ++  YC+    ++      R+  A  + P+  TY  ++        ++ +L +LDEM
Sbjct: 93  YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G  P    Y+ ++    + G    A RV +D+            N++LN +C     
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D AL + R L   G  P++V+YN ++KGLC A R    + +++E+      PN +T+ T+
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    RN  ++   E+L+ M   G T D   Y T+I    K G LK A + + +M + G+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V YNTL+   C   + E    LL EM  +    D  T  IL+D  C+ G +     
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 399
            LE M   G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++  LC
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 400 KAKRLPSASKLLLSCLKSG 418
            A+R   A  L+   ++ G
Sbjct: 449 SAERWVDAEDLMSQMIQQG 467


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 210/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    E ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+++  L    +  EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   +  HG +P+++TY  +I G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN ++YT ++K                            G C
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLK----------------------------GLC 437

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +        GR  +A + M QM+  G   + V++NTLIN  CK+G +E A  LL +M   
Sbjct: 438 SA-------GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG  + A   L  M   G   N   Y+ I   L ++G+++  
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A       + +G    +S    ++ G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ S++
Sbjct: 611 LASEGLAKEAQELLSEL 627



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 194/407 (47%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A  ++ +    G  P    Y+++++A C+   F     +L  M   G + D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N ++        +  ++ LL ++   G   D+ SYN+++  L    +  +   +  
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P   TFN ++  LC+N   +    +   + +HG  P++  Y  +I G+CK G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  IL  +   G  PN + Y T++K      ++K   E+LS M +K    D   + 
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F + G +    + +EQM++ G   D+++Y T+IN +CKEG ++ A +LL  M   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++TI++ GLC AG    A   +  M + G   N   +N +++ L K G ++ A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 377 INVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + + M V     D  +YS+++  L KA +   A +LL   +  G+
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 165/380 (43%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+    E+   ++      G  PD+  Y  +ID  C+    +    ILNRM   G+ P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN+++ G         + +LL EM +   P D  ++N L+    Q G  D    + +
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 380

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   T+  ++NG CK    D A+ + + +   G  P  V+Y I++KGLC AG
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  ++ ++   G  PN +T+ T++    +    +  +E+L  M   G + D   Y 
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           TVI    K G+ +EA + +  MV  G+  + + Y+++     +EG++     + D ++  
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   +  +I  LCK      A     YM   G   N   Y  ++  L  +G    A
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620

Query: 377 INVFESMEVKDSFTYSSMVH 396
             +   +  + +     M H
Sbjct: 621 QELLSELCSRGALRKHLMRH 640



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 11/383 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMRE--AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           VV YN ++  YC+     AG     R       + P+  T+  ++ G      ++ +L++
Sbjct: 79  VVAYNAMVAGYCR-----AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEV 133

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM   G  P    Y+ ++    + G    + RV + M     T  T   N++LN +C+
Sbjct: 134 LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICE 193

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ + R L   G   ++V+YN ++KGLC A R      ++ E+     APN +T
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           + T++    RN  ++   E+L+ M   G T D   Y T+I    K G L+ A + + +M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G++ ++V YNT++   C   + + A  LL EM ++    D  T  IL+D  C+ G + 
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
                LE M   G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
             LC A R   A +L+   ++ G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQG 456


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 210/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    E ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+++  L    +  EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   +  HG +P+++TY  +I G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN ++YT ++K                            G C
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLK----------------------------GLC 437

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +        GR  +A + M QM+  G   + V++NTLIN  CK+G +E A  LL +M   
Sbjct: 438 SA-------GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG  + A   L  M   G   N   Y+ I   L ++G+++  
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A       + +G    +S    ++ G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ S++
Sbjct: 611 LASEGLAKEAQELLSEL 627



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 194/407 (47%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A  ++ +    G  P    Y+++++A C+   F     +L  M   G + D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N ++        +  ++ LL ++   G   D+ SYN+++  L    +  +   +  
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P   TFN ++  LC+N   +    +   + +HG  P++  Y  +I G+CK G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  IL  +   G  PN + Y T++K      ++K   E+LS M +K    D   + 
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F + G +    + +EQM++ G   D+++Y T+IN +CKEG ++ A +LL  M   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++TI++ GLC AG    A   +  M + G   N   +N +++ L K G ++ A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 377 INVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + + M V     D  +YS+++  L KA +   A +LL   +  G+
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 165/380 (43%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+    E+   ++      G  PD+  Y  +ID  C+    +    ILNRM   G+ P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN+++ G         + +LL EM +   P D  ++N L+    Q G  D    + +
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 380

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   T+  ++NG CK    D A+ + + +   G  P  V+Y I++KGLC AG
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  ++ ++   G  PN +T+ T++    +    +  +E+L  M   G + D   Y 
Sbjct: 441 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 500

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           TVI    K G+ +EA + +  MV  G+  + + Y+++     +EG++     + D ++  
Sbjct: 501 TVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDT 560

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   +  +I  LCK      A     YM   G   N   Y  ++  L  +G    A
Sbjct: 561 TIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620

Query: 377 INVFESMEVKDSFTYSSMVH 396
             +   +  + +     M H
Sbjct: 621 QELLSELCSRGALRKHLMRH 640



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 11/383 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMRE--AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           VV YN ++  YC+     AG     R       + P+  T+  ++ G      ++ +L++
Sbjct: 79  VVAYNAMVAGYCR-----AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEV 133

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM   G  P    Y+ ++    + G    + RV + M     T  T   N++LN +C+
Sbjct: 134 LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICE 193

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ + R L   G   ++V+YN ++KGLC A R      ++ E+     APN +T
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           + T++    RN  ++   E+L+ M   G T D   Y T+I    K G L+ A + + +M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G++ ++V YNT++   C   + + A  LL EM ++    D  T  IL+D  C+ G + 
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
                LE M   G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
             LC A R   A +L+   ++ G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQG 456


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 203/410 (49%), Gaps = 4/410 (0%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + +++L++AY     F         +R+  +     +   L     + +L S +    +E
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +L+ G PPDV  +N LMH L +  K +EA  +F ++    L P   +FN ++NG CK+  
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D   R+ R + ++   P++ TY++LI GLCK G+L  A  +  E+ D G  PN +T+TT
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++       +  LG+EI   M RKG   D   Y T+I    K+G L+EA   + +M   G
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ D  +Y  LI+  CKEG LE+A  +  EM K+G E D    T LI G C+ G +  A 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 398
             L  M + G   +   Y  ++    K G +     + + M+    V    TY+ +++ L
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           CK  ++ +A+ LL + L  GV         +++G    G R +  K+QS+
Sbjct: 516 CKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 206/389 (52%), Gaps = 4/389 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N    A A   + +  G  PDV  +N+L+   C+    +    +   + + G+ P VV
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVV 261

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           ++N+LI G  ++  L     L   M+E  + PDV++Y+ L++ L + G+ D+AN++F +M
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   TF  ++NG C     D  + +++ + + G  P+++TYN LI GLCK G L
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           R A+ ++ E+   G  P+  TYT ++  C +    +  LEI   M ++G   D   +  +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+ F + G++ EA   + +M+  G++ D  +Y  +I+ +CK+G ++  + LL EM+  G 
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAI 377
                T+ +L++GLCK G +K A + L+ M  +G   +   YN +++   K G + D   
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDK 561

Query: 378 NVFESMEVKDSFTYSSMVHNL---CKAKR 403
              E   V+D  +Y+S++ +L   CK ++
Sbjct: 562 LQSEKGLVQDYGSYTSLIGDLRKTCKERQ 590



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 4/330 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   CK +++ +A+ +  +  + G+ P VV++N LI+ YC+  + D G+ +   M 
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGK 127
           E  + PDV TY+ LI G  +   L  +  L  EM + G+ P+  ++ +L+  HC+   G+
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV--TGR 345

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D    ++Q M+   + P   T+N ++NGLCK      A ++   + + G  P+  TY +
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CK G L +A  I KE+   G   + + +T ++    R  +       L  M   G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  VI  F K G +K     +++M  DG    +V+YN L+N  CK+G+++ A 
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           +LLD M   G   D  T+ IL++G CK GN
Sbjct: 526 MLLDAMLNLGVVPDDITYNILLEGHCKHGN 555



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 151/326 (46%), Gaps = 40/326 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  +L+ A  + ++    G++P+ VT+  LI+ +C     D G  I  +M  
Sbjct: 299 SVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLR 358

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDV+TYN+LI G  +   L  +  L+ EM + G+ PD ++Y  L+    + G  + 
Sbjct: 359 KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLES 418

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M+   +      F  +++G C+      A R  R + + G  P+  TY ++I 
Sbjct: 419 ALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIH 478

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G ++T   +LKE+   GH P  +TY  ++                          
Sbjct: 479 GFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLN------------------------- 513

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
              G C       K G++K A   ++ M+  GV  D ++YN L+  +CK G  E      
Sbjct: 514 ---GLC-------KQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED----F 559

Query: 311 DEME-KQGFECDKYTHTILIDGLCKA 335
           D+++ ++G   D  ++T LI  L K 
Sbjct: 560 DKLQSEKGLVQDYGSYTSLIGDLRKT 585



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 41/305 (13%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F++++N    + Y  +A++ FR ++KH       +   L   L K      A    +E+ 
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D G+ P+   +  +M                                       K  ++ 
Sbjct: 218 DCGYPPDVCKFNVLMH-----------------------------------RLCKEHKIN 242

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA     ++   G++  +VS+NTLIN YCK G L+  + L   M +     D +T+++LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 330 DGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           +GLCK G +  A +L LE  ++ G   N   +  +++     G+ D  + +++ M  K  
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDR-GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGV 361

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY+++++ LCK   L  A KL++   + G++  K     ++DG    G    A +
Sbjct: 362 KPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALE 421

Query: 445 IQSKI 449
           I+ ++
Sbjct: 422 IRKEM 426



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S ++ +G       +  ++ A+   G   +A      +    +Q+   S   L +   K 
Sbjct: 144 SVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL 203

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
                A+   +E+   G+  D     +L+  LCK   I  A+L    + K G    + ++
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263

Query: 361 NCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++   K G +D    +     E+    D FTYS +++ LCK  +L  A+KL L    
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323

Query: 417 SGV 419
            G+
Sbjct: 324 RGL 326


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 223/446 (50%), Gaps = 6/446 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           + I +  +C+  +L  A +++    +LG  PD +T++ L++ +C          +++RM 
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    PD+VT ++LI G      +S +L L+D M+E G  PD  +Y  +++ L + G   
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F+ M   ++      ++I+++ LCK+   D+AL +F  ++  G   ++VTY+ LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  G+      +L+E+      P+ +T++ ++    +  K     E+ + M  +G  
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K   L EA    + MV+ G + DIV+Y+ LIN YCK  +++    L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             E+  +G   +  T+  L+ G C++G +  A+   + M   G   ++  Y  ++D L  
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467

Query: 370 DGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           +G+++ A+ +FE M+ K   T     Y+ ++H +C A ++  A  L  S    GV+    
Sbjct: 468 NGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
               ++ GL   G   EA  +  K++
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMK 552



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 189/375 (50%), Gaps = 5/375 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    +I + + CK    + A ++  +    G+  DVVTY+ LI   C    +D G  
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M    I PDVVT+++LI    +   L  + +L +EM+  GI PD  +YNSL+    
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +     EAN++F  M+     P   T++I++N  CK +  D+ +R+FR +   G +P  +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN L+ G C++G+L  A+ + +E+   G  P+ +TY  ++     N +    LEI   M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481

Query: 244 KRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++   T  G G Y  +I       ++ +A      +   GV+ D+V+YN +I   CK+G 
Sbjct: 482 QKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           L  A +L  +M++ G   D +T+ ILI   L  +G I    L +E M   GF ++     
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL-IEEMKVCGFSADSSTIK 599

Query: 362 CIVDRLGKDGKIDHA 376
            ++D L  D ++D +
Sbjct: 600 MVIDMLS-DRRLDKS 613



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           VV Y+++ID+ C+  SFD   ++ N M   GI  DVVTY+SLI G   +        +L 
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM+   I PDV ++++L+    + GK  EA  ++ +MI   + P T T+N +++G CK  
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A +MF  +   G  P++VTY+ILI   CKA R+     + +E+   G  PN ITY 
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    ++ K     E+   M  +G       Y  ++      G L +A +  E+M   
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            + L I  YN +I+  C   K++ A+ L   +  +G + D  T+ ++I GLCK G++  A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544

Query: 342 RLHLEYMNKIGFDSNLEAYNCIV-DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 396
            +    M + G   +   YN ++   LG  G I  ++ + E M+V     DS T   MV 
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTI-KMVI 602

Query: 397 NLCKAKRLPSASKLLLS 413
           ++   +RL  +   +LS
Sbjct: 603 DMLSDRRLDKSFLDMLS 619



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 200/423 (47%), Gaps = 39/423 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+ T  ++I+ YC+       +++L R  + G  PD +T+++L+ G      +S +
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+EM   PD+ + ++L++ L   G+  EA  +   M+     P   T+  +LN 
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+  +  AL +FR +++      +V Y+I+I  LCK G    A               
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA--------------- 264

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
                               L + + M+ KG   D   Y ++I      G+  +    + 
Sbjct: 265 --------------------LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+   +  D+V+++ LI+++ KEGKL  A  L +EM  +G   D  T+  LIDG CK  
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A    + M   G + ++  Y+ +++   K  ++D  + +F  +  K    ++ TY+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++V   C++ +L +A +L    +  GV         ++DGL  +G   +A +I  K++ +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484

Query: 453 KIS 455
           +++
Sbjct: 485 RMT 487



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG+   +  D A+ +F  + +   +P  + +N L   + +  +        K +  +G  
Sbjct: 44  NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +  T T ++ C  R +K      +L    + GY  D   + T++  F   GR+ EA   
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++MV    + D+V+ +TLIN  C +G++  A +L+D M + GF+ D+ T+  +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
           +GN   A      M +    +++  Y+ ++D L KDG  D A+++F  ME+K    D  T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           YSS++  LC   +    +K+L   +   +        A++D     G   EAK++ +++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N L +A  +    +  G  PD+VTY++LI++YC+    D G  +   +   G+ P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN+L+ G  ++  L+ + +L  EM+  G+PP V +Y  L+  L   G+ ++A  +F+
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479

Query: 137 DMICGDLT-----------------------------------PCTATFNIMLNGLCKNR 161
            M    +T                                   P   T+N+M+ GLCK  
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +FR +++ G  P+  TYNILI+       L ++  +++E+   G + ++ T  
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++      R  K  L++LS
Sbjct: 600 MVIDMLSDRRLDKSFLDMLS 619


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 210/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    E ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+++  L    +  EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   +  HG +P+++TY  +I G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN ++YT ++K                            G C
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLK----------------------------GLC 437

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +        GR  +A + M QM+  G   + V++NTLIN  CK+G +E A  LL +M   
Sbjct: 438 SA-------GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG  + A   L  M   G   N   Y+ I   L ++G+++  
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A       + +G    +S    ++ G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ S++
Sbjct: 611 LASEGLAKEAQELLSEL 627



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 194/407 (47%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A  ++ +    G  P    Y+++++A C+   F     +L  M   G + D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N ++        +  ++ LL ++   G   D+ SYN+++  L    +  +   +  
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P   TFN ++  LC+N   +    +   + +HG  P++  Y  +I G+CK G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  IL  +   G  PN + Y T++K      ++K   E+LS M +K    D   + 
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F + G +    + +EQM++ G   D+++Y T+IN +CKEG ++ A +LL  M   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++TI++ GLC AG    A   +  M + G   N   +N +++ L K G ++ A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 377 INVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + + M V     D  +YS+++  L KA +   A +LL   +  G+
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 167/387 (43%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+    E+   ++      G  PD+  Y  +ID  C+    +    ILNRM 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VV YN+++ G         + +LL EM +   P D  ++N L+    Q G  D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               + + M+     P   T+  ++NG CK    D A+ + + +   G  P  V+Y I++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC AGR   A  ++ ++   G  PN +T+ T++    +    +  +E+L  M   G +
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y TVI    K G+ +EA + +  MV  G+  + + Y+++     +EG++     +
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D ++      D   +  +I  LCK      A     YM   G   N   Y  ++  L  
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
           +G    A  +   +  + +     M H
Sbjct: 614 EGLAKEAQELLSELCSRGALRKHLMRH 640



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 11/383 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMRE--AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           VV YN ++  YC+     AG     R       + P+  T+  ++ G      ++ +L++
Sbjct: 79  VVAYNAMVAGYCR-----AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEV 133

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM   G  P    Y+ ++    + G    + RV + M     T  T   N++LN +C+
Sbjct: 134 LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICE 193

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ + R L   G   ++V+YN ++KGLC A R      ++ E+     APN +T
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           + T++    RN  ++   E+L+ M   G T D   Y T+I    K G L+ A + + +M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G++ ++V YNT++   C   + + A  LL EM ++    D  T  IL+D  C+ G + 
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
                LE M   G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
             LC A R   A +L+   ++ G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQG 456



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 1/228 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R   AE ++   I+ G  P+ VT+N LI+  C+    +    +L +M   G SPD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +++Y+++I G  +      +L+LL+ M+  GI P+   Y+S+   L + G+ ++  ++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++    +      +N +++ LCK   TD A+  F  +  +G +P   TY +LIKGL   G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 197 RLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAM 243
             + A+ +L EL   G    + + +  I  C   N K K    + SA+
Sbjct: 616 LAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQKCEENLTSAV 663


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 217/449 (48%), Gaps = 41/449 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T+N+LI+ YC     +  ++++ ++ + G  PD +T+N+LI G   N  +  +
Sbjct: 98  GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD--------------------------- 129
           L   D +L +G   D +SY +L++ L ++G+                             
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217

Query: 130 --------EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
                   +A  ++  MI   ++P   TF+ ++ G C     + A  +FR +      P+
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEIL 240
             T+NIL+  LCK G L+ A+ +L  +   G  PN +TY+++M   C  N+  K    +L
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK-AKHVL 336

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + + + G   +   YCT+I  F KI  + EA      M   G+  D V+YN+LI+  CK 
Sbjct: 337 NTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKS 396

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G++  A+ L+DEM   G   + +T+  LID LCK  ++  A   ++ +   G   ++  +
Sbjct: 397 GRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTF 456

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++  L K G++ +A +VF+ +  K    +++TY+ MV+ LCK      A  LL     
Sbjct: 457 NILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDD 516

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +G+       + ++  L H     +A+K+
Sbjct: 517 NGIIPDAVTYETLIQALFHKDENEKAEKL 545



 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 206/409 (50%), Gaps = 4/409 (0%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C   ++++A       + LG   D  +Y  LI+  C+         +L 
Sbjct: 138 TITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLR 197

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           ++    +  +VV YN++I    ++ L+  + +L  +M+   I PDV ++++L++    +G
Sbjct: 198 KIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVG 257

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + +EA  +F++M+  ++ P   TFNI+++ LCK      A  M   + K G +P +VTY+
Sbjct: 258 QLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYS 317

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G C   ++  A+ +L  +   G APNA +Y T++    + +     L + + M+ K
Sbjct: 318 SLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFK 377

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y ++I    K GR+  A + +++M  +G   +I +YN LI+  CK   ++ A
Sbjct: 378 GIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L+ +++ QG + D YT  ILI GLCK G +K A+   + +   G+  N   YN +V+ 
Sbjct: 438 IALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNG 497

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           L K+G  D A  +   M+    + D+ TY +++  L        A KLL
Sbjct: 498 LCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLL 546



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 170/341 (49%), Gaps = 1/341 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++  + N  + + CK   +  A  +    I   + PDVVT++ LI  +C     +  + 
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFG 264

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I+PD  T+N L+    +   L  + ++L  M++ G+ P+V +Y+SLM    
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + + ++A  V   +      P   ++  M+NG CK +  D AL +F  +Q  G  P+ V
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI GLCK+GR+  A  ++ E+ D+G   N  TY  ++    +N      + ++  +
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +G   D + +  +I    K+GRLK A D  + +++ G  ++  +YN ++N  CKEG  
Sbjct: 445 KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLF 504

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARL 343
           + A  LL +M+  G   D  T+  LI  L  K  N K  +L
Sbjct: 505 DEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKL 545



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 184/385 (47%), Gaps = 12/385 (3%)

Query: 39  LPDVVTYNMLIDAYCQF------VSFDAGYTILNRMREAGISPDVVTYNSLIAGATR--N 90
           +P  +   ++   Y QF      +  D   +  N +     +  ++ +N ++    +  N
Sbjct: 22  IPSFLFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNN 81

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
           +    ++ L   +   GI PD++++N L++C   + + + A  +   ++     P T TF
Sbjct: 82  NHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N ++ GLC N     AL     +   GF  +  +Y  LI GLCK G  RTA  +L+++  
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG 201

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
                N + Y TI+    +++      E+ S M  K  + D   +  +I  F  +G+L+E
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A     +MV   +  D  ++N L++  CKEG L+ A  +L  M K+G   +  T++ L+D
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD 321

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G C    +  A+  L  ++++G   N  +Y  +++   K   +D A+++F  M+ K    
Sbjct: 322 GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           D  TY+S++  LCK+ R+  A +L+
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELV 406



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 144/274 (52%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V   CK   L+ A+ +++  ++ GV+P+VVTY+ L+D YC     +    +LN + 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G +P+  +Y ++I G  +  ++  +L L ++M   GI PD  +YNSL+  L + G+  
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +  +M          T+N +++ LCKN + D A+ + + ++  G  P++ T+NILI
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK GRL+ A+ + ++L   G++ NA TY  ++    +   +     +LS M   G  
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            D   Y T+I A       ++A   + +M+   V
Sbjct: 521 PDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 31/174 (17%)

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  DI ++N LIN YC   ++  A+ ++ ++ K G+E D  T   LI GLC  G +K A
Sbjct: 98  GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
               +++  +GF                                 D F+Y ++++ LCK 
Sbjct: 158 LHFHDHVLALGFHL-------------------------------DQFSYGTLINGLCKI 186

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               +A ++L       V+I       ++D L       +A ++ S++   KIS
Sbjct: 187 GETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 210/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    E ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+++  L    +  EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   +  HG +P+++TY  +I G CK G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN ++YT ++K                            G C
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLK----------------------------GLC 437

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +        GR  +A + M QM+  G   + V++NTLIN  CK+G +E A  LL +M   
Sbjct: 438 SA-------GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG  + A   L  M   G   N   Y+ I   L ++G+++  
Sbjct: 491 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKV 550

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A       + +G    +S    ++ G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ S++
Sbjct: 611 LASEGLAKEAQELLSEL 627



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 194/407 (47%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A  ++ +    G  P    Y+++++A C+   F     +L  M   G + D
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N ++        +  ++ LL ++   G   D+ SYN+++  L    +  +   +  
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMD 240

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P   TFN ++  LC+N   +    +   + +HG  P++  Y  +I G+CK G
Sbjct: 241 EMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEG 300

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  IL  +   G  PN + Y T++K      ++K   E+LS M +K    D   + 
Sbjct: 301 HLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFN 360

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F + G +    + +EQM++ G   D+++Y T+IN +CKEG ++ A +LL  M   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++TI++ GLC AG    A   +  M + G   N   +N +++ L K G ++ A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 377 INVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + + M V     D  +YS+++  L KA +   A +LL   +  G+
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 167/387 (43%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+    E+   ++      G  PD+  Y  +ID  C+    +    ILNRM 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VV YN+++ G         + +LL EM +   P D  ++N L+    Q G  D
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               + + M+     P   T+  ++NG CK    D A+ + + +   G  P  V+Y I++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC AGR   A  ++ ++   G  PN +T+ T++    +    +  +E+L  M   G +
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y TVI    K G+ +EA + +  MV  G+  + + Y+++     +EG++     +
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D ++      D   +  +I  LCK      A     YM   G   N   Y  ++  L  
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
           +G    A  +   +  + +     M H
Sbjct: 614 EGLAKEAQELLSELCSRGALRKHLMRH 640



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 11/383 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMRE--AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           VV YN ++  YC+     AG     R       + P+  T+  ++ G      ++ +L++
Sbjct: 79  VVAYNAMVAGYCR-----AGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEV 133

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM   G  P    Y+ ++    + G    + RV + M     T  T   N++LN +C+
Sbjct: 134 LDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICE 193

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ + R L   G   ++V+YN ++KGLC A R      ++ E+     APN +T
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           + T++    RN  ++   E+L+ M   G T D   Y T+I    K G L+ A + + +M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G++ ++V YNT++   C   + + A  LL EM ++    D  T  IL+D  C+ G + 
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
                LE M   G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
             LC A R   A +L+   ++ G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQG 456



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 1/228 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R   AE ++   I+ G  P+ VT+N LI+  C+    +    +L +M   G SPD
Sbjct: 436 LCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 495

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +++Y+++I G  +      +L+LL+ M+  GI P+   Y+S+   L + G+ ++  ++F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++    +      +N +++ LCK   TD A+  F  +  +G +P   TY +LIKGL   G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAM 243
             + A+ +L EL   G    + + +  I  C   N K K    + SA+
Sbjct: 616 LAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQKCEENLTSAV 663


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 214/447 (47%), Gaps = 36/447 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  AE+II    + G+ PD  TY  +I  YC+    D+ + I NRM
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G  P+  TY++LI G   +  ++ +LD + EM   G+ P V ++ + +  L  +G+ 
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRI 349

Query: 129 DEANRVFQDM---------------ICGD-----------------LTPCTATFNIMLNG 156
           ++A ++F DM               I G                  + P T T+N ++N 
Sbjct: 350 EDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNV 409

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L +N   D+AL +F  + KHG +P   +YN LI+G C  G    A  +L  +      P 
Sbjct: 410 LMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT 469

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  I+K    +    + + +L  MK  G   D + Y  +I+ F KI +++ A+    
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G+  + V+Y  LI+ YCK+ KL+ A  +L+ M++ G   +  T+ +LI GL K  
Sbjct: 530 EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQN 589

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           N  GA    + M +     ++  Y+ +++ L  +G I  A+ +F  M     + +  TYS
Sbjct: 590 NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYS 649

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGV 419
           S++  L +  R+  A ++     K G+
Sbjct: 650 SLIQALGQEGRVEEAEEMFSELKKQGL 676



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 3/370 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C   R+E A  I ID  + G  P+V TY  LI    Q VS  A   + +RM   G+
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG--QRVSRMA-IGLFHRMSRDGV 396

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ VTYN+L+     N  +  +L + + M + G  P+  SYN L+     +G  ++A  
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M+ G  TP   T+NI++ G C +  TD A+R+   ++ +G  P+  +Y  LI G C
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++  A  +  E+ D G  PN +TYT ++    ++ K      +L  MKR G   +  
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    K      A +  + M+ + +  D+V+Y+T+IN  C  G +  A  + ++M
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K G   + +T++ LI  L + G ++ A      + K G   +   Y  +++     GK+
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696

Query: 374 DHAINVFESM 383
           D A +    M
Sbjct: 697 DRAFDFLGEM 706



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 192/408 (47%), Gaps = 7/408 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+++ YN +I+A C+  +     +I+N++ ++G+ PD  TY S+I G  RN  L
Sbjct: 220 LREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDL 279

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             + ++ + M E G  P+  +Y++L++ L   G+ +EA     +M    + P   TF   
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAP 339

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +  LC     ++A ++F  ++K G  P + TY  LI G   +   R A  +   +   G 
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGV 396

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY  +M     N +    L + + M + G   +   Y  +I  +  IG  ++A  
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  M+       +V+YN +I  YC  G  + A  +L+ M+  G + D++++T LI G C
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K   ++ A      M   G   N   Y  ++    KD K+D A  + E M+      +  
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQ 576

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           TY+ ++H L K      A +L    L+  +         V++GL ++G
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 184/391 (47%), Gaps = 26/391 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G LP+  +YN LI  YC     +   ++L  M +   +P +VTYN +I G   +     +
Sbjct: 430 GCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVA 489

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + +L+ M   G  PD WSY  L+    ++ K + A+ +F +M+   L P   T+  +++G
Sbjct: 490 IRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISG 549

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK+   D A RM   +++ G  P + TYN+LI GL K      A  + K + +   +P+
Sbjct: 550 YCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPD 609

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY+T++     N    L LE+ + M + G   +   Y ++I A  + GR++EA +   
Sbjct: 610 VVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS 669

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK-- 334
           ++   G+  D V+Y  +I +    GK++ A+  L EM   G +    T+ +LI GL    
Sbjct: 670 ELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEM 729

Query: 335 --------AGNIKGARLHLEYMNK------------IGFDSNLEAYNCIVDRLGKDGKID 374
                         +    + +NK            + F+ + + Y+ ++ RL + G+  
Sbjct: 730 VYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWF 789

Query: 375 HAINVFESM----EVKDSFTYSSMVHNLCKA 401
            A N++ SM    +  +  TY   + +L +A
Sbjct: 790 EANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 182/395 (46%), Gaps = 23/395 (5%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+   + G    + TY +L+    + ++ S  +D   ++L  G+ P++  YNS+++ L +
Sbjct: 181 LDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCK 240

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   +A  +   +    + P T T+  M+ G C+NR  D+A  +F  + + G  P   T
Sbjct: 241 DGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAAT 300

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ LI GLC +GR+  A   + E+   G  P   T+T  +       + +   +I   MK
Sbjct: 301 YSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMK 360

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +KG   + + Y ++I+   ++ R+  A     +M  DGV  + V+YN L+N+  +  +++
Sbjct: 361 KKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEID 417

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +A ++ + M K G   +  ++  LI G C  G+ + A   L  M K      L  YN I+
Sbjct: 418 SALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIII 477

Query: 365 DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
                 G  D AI V E M+      D ++Y+ ++   CK  ++  AS +    +  G+ 
Sbjct: 478 KGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLC 537

Query: 421 ILKSAQKAVVDG----------------LRHSGCR 439
             +    A++ G                ++ SGCR
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 146/372 (39%), Gaps = 57/372 (15%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +CK  +L+ A  ++    R G  P+V TYN+LI    +  +F     +   M E  I
Sbjct: 547 ISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVVTY+++I G   N  +  +L++ ++M++ G  P++ +Y+SL+  L Q G+ +EA  
Sbjct: 607 SPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE 666

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR-------------------MFRGLQ 174
           +F ++    L P   T+  M+     +   D A                     + +GLQ
Sbjct: 667 MFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQ 726

Query: 175 KHGFVPELVT--------------------------------------YNILIKGLCKAG 196
                 +LV                                       Y+ L+  L ++G
Sbjct: 727 NEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSG 786

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  + + +      PN  TY   +    R  K  L +++   M  +       GY 
Sbjct: 787 RWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYK 846

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    ++ R KEA    E+M++  +  D + +  LIN     G  +     L  ME  
Sbjct: 847 ELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETN 906

Query: 317 GFECDKYTHTIL 328
                 +  TIL
Sbjct: 907 RRNPSSHARTIL 918



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 4/147 (2%)

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           + ++  A   LD   ++G +   +T+T L+  L K             + + G   NL  
Sbjct: 171 KAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLI 230

Query: 360 YNCIVDRLGKDGKIDHA---IN-VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++ L KDG +  A   IN VF+S    D+FTY+SM+   C+ + L SA ++     
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREA 442
           + G     +    +++GL +SG   EA
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEA 317


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 212/417 (50%), Gaps = 3/417 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  N+ +   CK+ ++  A          G   D+ TY  ++D   +         ++
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            ++   G +P + TYN+L+ G  +   L  ++DLL ++++ G  PDV +Y SL+  L + 
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  EA ++F++M    L   T  +  ++ GL +      A  +++ +   G VP++VT 
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCKAGR+  A  I K +   G APN + Y+ ++    + RK    LE+L+ MK+
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
              T D   Y  +I    K G ++ A  + ++M+  G + D+ +YN L++ +CK G  +A
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  + D+M       +  T+  LI GLCK   +  A L+ ++M + G   +   Y+ +VD
Sbjct: 429 ACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVD 488

Query: 366 RLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            L K GK++    +F+ ME   V +S T + ++ +LCKA R+  A  L  +  K G+
Sbjct: 489 GLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 205/426 (48%), Gaps = 5/426 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISP 75
           F +  R  +A  ++ + +    LPDV T+N+LI  YC     +  + ++  M E  G++P
Sbjct: 69  FARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAP 128

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            + T+N ++ G  ++  +  ++D  +     G   D+ +Y +++  L +  K  +A  + 
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + +     TP  AT+N +LNGLCK    + A+ + R +  +G  P++VTY  LI GL K 
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A  + KE+   G   + + YT +++   +  K      +   M  +G   D    
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    K GR+  A    + M   G+  + V Y+ LI+  CK  K++ A  +L +M+K
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
                D  T+ ILIDGLCK+G+++ AR   + M + G   ++  YN +V    K G  D 
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A  VF+ M       +  TY +++  LCK ++L  AS       + G         ++VD
Sbjct: 429 ACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVD 488

Query: 432 GLRHSG 437
           GL  SG
Sbjct: 489 GLCKSG 494



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 170/337 (50%), Gaps = 5/337 (1%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G    V + N+L+    +  +  EA  + ++ +     P   T+N+++ G C  R  + 
Sbjct: 53  FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112

Query: 166 ALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           A  + R +++ +G  P L T+N+++ GLCK+G++  A    +    +G   +  TYT I+
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +N+K +  + ++  +   G T     Y  ++    K+GRL+EA D + ++V +G  
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D+V+Y +LI+   KE +   AY L  EM  +G   D   +T LI GL +AG I  A   
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            + M   G   ++   + ++D L K G+I  A+ +F+SME +    +   YS+++H LCK
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           A+++  A ++L    K+           ++DGL  SG
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 223/446 (50%), Gaps = 6/446 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           + I +  +C+  +L  A +++    +LG  PD +T++ L++ +C          +++RM 
Sbjct: 137 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 196

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    PD+VT ++LI G      +S +L L+D M+E G  PD  +Y  +++ L + G   
Sbjct: 197 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 256

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F+ M   ++      ++I+++ LCK+   D+AL +F  ++  G   ++VTY+ LI
Sbjct: 257 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 316

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  G+      +L+E+      P+ +T++ ++    +  K     E+ + M  +G  
Sbjct: 317 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 376

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K   L EA    + MV+ G + DIV+Y+ LIN YCK  +++    L
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 436

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             E+  +G   +  T+  L+ G C++G +  A+   + M   G   ++  Y  ++D L  
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496

Query: 370 DGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           +G+++ A+ +FE M+ K   T     Y+ ++H +C A ++  A  L  S    GV+    
Sbjct: 497 NGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 555

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
               ++ GL   G   EA  +  K++
Sbjct: 556 TYNVMIGGLCKKGSLSEADMLFRKMK 581



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 189/375 (50%), Gaps = 5/375 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    +I + + CK    + A ++  +    G+  DVVTY+ LI   C    +D G  
Sbjct: 271 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 330

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M    I PDVVT+++LI    +   L  + +L +EM+  GI PD  +YNSL+    
Sbjct: 331 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 390

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +     EAN++F  M+     P   T++I++N  CK +  D+ +R+FR +   G +P  +
Sbjct: 391 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 450

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN L+ G C++G+L  A+ + +E+   G  P+ +TY  ++     N +    LEI   M
Sbjct: 451 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510

Query: 244 KRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++   T  G G Y  +I       ++ +A      +   GV+ D+V+YN +I   CK+G 
Sbjct: 511 QKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           L  A +L  +M++ G   D +T+ ILI   L  +G I    L +E M   GF ++     
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL-IEEMKVCGFSADSSTIK 628

Query: 362 CIVDRLGKDGKIDHA 376
            ++D L  D ++D +
Sbjct: 629 MVIDMLS-DRRLDKS 642



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           VV Y+++ID+ C+  SFD   ++ N M   GI  DVVTY+SLI G   +        +L 
Sbjct: 274 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM+   I PDV ++++L+    + GK  EA  ++ +MI   + P T T+N +++G CK  
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A +MF  +   G  P++VTY+ILI   CKA R+     + +E+   G  PN ITY 
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    ++ K     E+   M  +G       Y  ++      G L +A +  E+M   
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            + L I  YN +I+  C   K++ A+ L   +  +G + D  T+ ++I GLCK G++  A
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVD-RLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 396
            +    M + G   +   YN ++   LG  G I  ++ + E M+V     DS T   MV 
Sbjct: 574 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTI-KMVI 631

Query: 397 NLCKAKRLPSASKLLLS 413
           ++   +RL  +   +LS
Sbjct: 632 DMLSDRRLDKSFLDMLS 648



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 200/423 (47%), Gaps = 39/423 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+ T  ++I+ YC+       +++L R  + G  PD +T+++L+ G      +S +
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+EM   PD+ + ++L++ L   G+  EA  +   M+     P   T+  +LN 
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+  +  AL +FR +++      +V Y+I+I  LCK G    A               
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA--------------- 293

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
                               L + + M+ KG   D   Y ++I      G+  +    + 
Sbjct: 294 --------------------LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+   +  D+V+++ LI+++ KEGKL  A  L +EM  +G   D  T+  LIDG CK  
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A    + M   G + ++  Y+ +++   K  ++D  + +F  +  K    ++ TY+
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++V   C++ +L +A +L    +  GV         ++DGL  +G   +A +I  K++ +
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513

Query: 453 KIS 455
           +++
Sbjct: 514 RMT 516



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG+   +  D A+ +F  + +   +P  + +N L   + +  +        K +  +G  
Sbjct: 73  NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 131

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +  T T ++ C  R +K      +L    + GY  D   + T++  F   GR+ EA   
Sbjct: 132 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 191

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++MV    + D+V+ +TLIN  C +G++  A +L+D M + GF+ D+ T+  +++ LCK
Sbjct: 192 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 251

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
           +GN   A      M +    +++  Y+ ++D L KDG  D A+++F  ME+K    D  T
Sbjct: 252 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 311

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           YSS++  LC   +    +K+L   +   +        A++D     G   EAK++ +++
Sbjct: 312 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N L +A  +    +  G  PD+VTY++LI++YC+    D G  +   +   G+ P+
Sbjct: 389 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 448

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN+L+ G  ++  L+ + +L  EM+  G+PP V +Y  L+  L   G+ ++A  +F+
Sbjct: 449 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 508

Query: 137 DMICGDLT-----------------------------------PCTATFNIMLNGLCKNR 161
            M    +T                                   P   T+N+M+ GLCK  
Sbjct: 509 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 568

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +FR +++ G  P+  TYNILI+       L ++  +++E+   G + ++ T  
Sbjct: 569 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 628

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++      R  K  L++LS
Sbjct: 629 MVIDMLSDRRLDKSFLDMLS 648


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 214/442 (48%), Gaps = 3/442 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++R   + +  +C+ + + +A  ++ +  +  ++P  V+Y  +I+  C          
Sbjct: 400 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 459

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M  +G+ P+VV Y+ LI        +  +  LLD M   G+ PD++ YN+++ CL 
Sbjct: 460 LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK +EA+    ++    L P   TF   + G  K      A + F  +  HG +P   
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y +LI G  KAG L  A  I + L   G  P+  T +  +    +N + +  L++ S +
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K KG   D F Y ++I+ F K G +++A +  ++M   G+  +I  YN L++  CK G +
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L D M ++G E D  T++ +IDG CK+ N+  A      M   G   +   YN +
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759

Query: 364 VDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           V    K+G ++ A+N+F  M  K    + ++++++   CK+ ++  AS+L    +   + 
Sbjct: 760 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819

Query: 421 ILKSAQKAVVDGLRHSGCRREA 442
                   V+D    +G   EA
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEA 841



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 211/439 (48%), Gaps = 5/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  ++EKA  I+   + LG  P+  T+ +LI+ YC+  +      +L+ M +
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P  V+Y ++I G      LS +  LL++M   G+ P+V  Y+ L+      G+ +E
Sbjct: 432 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEE 491

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+   M C  + P    +N +++ L K    + A      +Q  G  P+ VT+   I 
Sbjct: 492 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G++  A     E+ D G  PN   YT ++   F+       L I   +   G   
Sbjct: 552 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLP 611

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D       I   +K GR++EA     ++   G+  D+ +Y++LI+ +CK+G++E A+ L 
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   + + +  L+DGLCK+G+I+ AR   + M + G + +   Y+ ++D   K 
Sbjct: 672 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +  A ++F  M  K     SF Y+++VH  CK   +  A  L    L+ G     S  
Sbjct: 732 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 791

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++DG   S   +EA ++
Sbjct: 792 -TLIDGYCKSCKIQEASQL 809



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 202/413 (48%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P+  TY ++    C+    +        M++ G+ PD    ++LI G  R   +   
Sbjct: 293 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 352

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + D M+  GIP ++ +YN L+H L + GK ++A  + + M+     P + TF +++ G
Sbjct: 353 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEG 412

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+      AL +   ++K   VP  V+Y  +I GLC    L  A  +L+++  SG  PN
Sbjct: 413 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 472

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y+ ++       + +    +L  M   G   D F Y  +I+   K G+++EA+ Y+ 
Sbjct: 473 VVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 532

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++   G++ D V++   I  Y K GK+  A    DEM   G   +   +T+LI+G  KAG
Sbjct: 533 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 592

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           N+  A      ++ +G   +++  +  +  L K+G++  A+ VF  ++    V D FTYS
Sbjct: 593 NLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 652

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S++   CK   +  A +L       G+        A+VDGL  SG  + A+K+
Sbjct: 653 SLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 196/382 (51%), Gaps = 5/382 (1%)

Query: 19   KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
            K  R+++A  +  +    G++PDV TY+ LI  +C+    +  + + + M   GI+P++ 
Sbjct: 625  KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684

Query: 79   TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
             YN+L+ G  ++  +  +  L D M E G+ PD  +Y++++    +     EA  +F +M
Sbjct: 685  IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 139  ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                + P +  +N +++G CK    + A+ +FR + + GF   L ++N LI G CK+ ++
Sbjct: 745  PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKI 803

Query: 199  RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
            + A  + +E+      P+ +TYTT++    +  K +    +   M+ +    D   Y ++
Sbjct: 804  QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 259  IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
            +  + K+G+  E     E+MV  GV+ D V+Y  +I  +CKE  L  A+ L DE+  +G 
Sbjct: 864  MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 319  ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
                  H +LI  LCK  ++  A   L+ M ++G   +L A N +V    + GK+D A  
Sbjct: 924  LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 379  VFESME----VKDSFTYSSMVH 396
            VFE ++    V D+ T   +V+
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVN 1005



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 213/438 (48%), Gaps = 5/438 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  ++ +A     + +  G++P+   Y +LI+ + +  +     +I  R+   G+ PD
Sbjct: 553 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T ++ I G  +N  +  +L +  E+ E G+ PDV++Y+SL+    + G+ ++A  +  
Sbjct: 613 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 672

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P    +N +++GLCK+     A ++F G+ + G  P+ VTY+ +I G CK+ 
Sbjct: 673 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +  E+   G  P++  Y  ++  C +    +  + +   M +KG+      + 
Sbjct: 733 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFN 791

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K  +++EA+   ++M+   +  D V+Y T+I+ +CK GK+E A LL  EM+++
Sbjct: 792 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 851

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  T+T L+ G  K G         E M   G   +   Y  ++    K+  +  A
Sbjct: 852 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 911

Query: 377 INVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             + + +  K   T  +    ++  LCK + L  ASKLL    + G++   +A   +V  
Sbjct: 912 FKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRS 971

Query: 433 LRHSGCRREAKKIQSKIR 450
              +G   EA ++   ++
Sbjct: 972 FHEAGKMDEATRVFEGVK 989



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 205/480 (42%), Gaps = 55/480 (11%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    I     C+A R+ +A+    +  + G+ PD    + LID + +    D    I 
Sbjct: 297 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 356

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   GI  +++TYN LI G  +   +  + ++L  M+ +G  P     NS   CL   
Sbjct: 357 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP-----NSRTFCLLIE 411

Query: 126 GKPDEAN-----RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           G   E N      +  +M   +L P   ++  M+NGLC  +    A ++   +   G  P
Sbjct: 412 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 471

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +V Y+ILI      GR+  AR +L  +  SG AP+   Y  I+ C  +  K +     L
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY--- 297
             ++ +G   D   +   I  + K G++ EA  Y ++M+  G+  +   Y  LIN +   
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 298 --------------------------------CKEGKLEAAYLLLDEMEKQGFECDKYTH 325
                                            K G+++ A  +  E++++G   D +T+
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 326 TILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           + LI G CK G ++ A  LH E   K G   N+  YN +VD L K G I  A  +F+ M 
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLK-GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            K    DS TYS+M+   CK++ +  A  L       GV+        V + L H  C+ 
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ----PHSFVYNALVHGCCKE 766



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 36/364 (9%)

Query: 14   VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            +  FCK   +EKA  +  +    G+ P++  YN L+D  C+         + + M E G+
Sbjct: 655  ISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGL 714

Query: 74   SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             PD VTY+++I G  ++  ++ +  L  EM   G+ P  + YN+L+H   + G  ++A  
Sbjct: 715  EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMN 774

Query: 134  VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            +F++M+       T +FN +++G CK+     A ++F+ +     +P+ VTY  +I   C
Sbjct: 775  LFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 833

Query: 194  KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            KAG++  A  + KE+ +     + +TYT++M    +  +      +   M  KG   D  
Sbjct: 834  KAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEV 893

Query: 254  GYCTVIAAFVK--------------IGR---------------------LKEATDYMEQM 278
             Y  VI A  K              +G+                     L EA+  +++M
Sbjct: 894  TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 953

Query: 279  VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
               G++  + + NTL+  + + GK++ A  + + ++  G   D  T   L++G     + 
Sbjct: 954  GELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 1013

Query: 339  KGAR 342
            + AR
Sbjct: 1014 EDAR 1017



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 36/322 (11%)

Query: 9    LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            + N  V   CK+  +++A  +       G+ PD VTY+ +ID YC+  +    +++ + M
Sbjct: 685  IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 69   REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               G+ P    YN+L+ G  +   +  +++L  EML+ G    + S+N+L+    +  K 
Sbjct: 745  PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKI 803

Query: 129  DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             EA+++FQ+MI   + P   T+  +++  CK    + A  +F+ +Q+   + + VTY  L
Sbjct: 804  QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 189  IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC---------CFRNRKYKLG--- 236
            + G  K G+      + +++   G  P+ +TY  ++            F+ R   +G   
Sbjct: 864  MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 237  --------LEILSAMKRKGYT-----FDGFGYC----------TVIAAFVKIGRLKEATD 273
                    L I +  KR+  T      D  G            T++ +F + G++ EAT 
Sbjct: 924  LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 274  YMEQMVTDGVQLDIVSYNTLIN 295
              E + + G+  D  +   L+N
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVN 1005



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 101/217 (46%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  +T   N  +  +CK+ ++++A  +  + I   ++PD VTY  +ID +C+    +   
Sbjct: 783 GFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 842

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M+E  +  D VTY SL+ G  +    S    L ++M+  G+ PD  +Y  +++  
Sbjct: 843 LLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +     EA ++  +++   +       ++++  LCK      A ++   + + G  P L
Sbjct: 903 CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 962

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              N L++   +AG++  A  + + +   G  P+  T
Sbjct: 963 AACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 86/191 (45%)

Query: 18   CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
            CKA ++E+A  +  +     ++ D VTY  L+  Y +       + +  +M   G+ PD 
Sbjct: 833  CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 892

Query: 78   VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            VTY  +I    +   L  +  L DE++  G+      ++ L+  L +     EA+++  +
Sbjct: 893  VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 952

Query: 138  MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
            M    L P  A  N ++    +    D A R+F G++  G VP+  T   L+ G      
Sbjct: 953  MGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTD 1012

Query: 198  LRTARWILKEL 208
               AR ++K+L
Sbjct: 1013 SEDARNLIKQL 1023


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 207/417 (49%), Gaps = 8/417 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           +  V +  KA  L +A  +         +P +VTYN+LI++ C    F     +   M R
Sbjct: 14  DFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKR 73

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  + PD  TYN+LI+G   +     +  LL EM +  I  +V++Y+S++  L +  KP+
Sbjct: 74  EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPE 133

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E+ +V ++M+     P    FN ++ G  ++   + A  +++ + + G+ P+ V+Y+ILI
Sbjct: 134 ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILI 193

Query: 190 KGLCKAGRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
            GL K G+L  +  IL E+    +G+ PN IT++T++    R  + +  LE+  +M   G
Sbjct: 194 HGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 253

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              + + Y T+IA   +  ++ +A +  E+M    +  D V+YN+LI  YCK G ++ A 
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 313

Query: 308 LLLDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            L  EM    G +    T   LIDG CK G +  A   +  M   G  ++   Y  ++  
Sbjct: 314 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAG 373

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           L +  K+D A+ V++ M  K    D  +  S V  LCK   +  A  +  +  KSG 
Sbjct: 374 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 430



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 189/385 (49%), Gaps = 13/385 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C +   E A  ++ +     +  +V TY+ +I +  +    +  Y +L  M  
Sbjct: 85  NTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMA 144

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG +PDV  +N ++ G  R++ +  + ++   M+E G  PD  SY+ L+H L ++GK DE
Sbjct: 145 AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDE 204

Query: 131 ANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + ++  +M        P   TF+ +++GLC+    + AL +F  + + G  P   TY  L
Sbjct: 205 SLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 264

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFR---NRKYKLGLEIL--SA 242
           I GLC+A ++  AR + +++  +   P+A+ Y +++   C R   +   KL  E+   + 
Sbjct: 265 IAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 324

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++    TF+     T+I  F K+G+L  A + + +M T G+  D  +Y  LI    +  K
Sbjct: 325 LQPTIVTFN-----TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATK 379

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+ A  +  +M ++ F  D  +    + GLCK GNI  A    E   K G   N E +  
Sbjct: 380 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 439

Query: 363 IVDRLGKDGKIDHAINVFESMEVKD 387
           + + L K G+++ A  + E  + +D
Sbjct: 440 LSESLIKLGRVEDAQKLMEPAKARD 464



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 182/384 (47%), Gaps = 8/384 (2%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y+ ++    +  +L+ +L++ + M      P + +YN L++     G+  +A  +FQ M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 139 ICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
                + P   T+N +++GLC +  T+ A ++   ++       + TY+ +IK L K  +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
              +  +L+E+  +G  P+   +  +M+   R+   +   E+   M   GY  D   Y  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 258 VIAAFVKIGRLKEATDYMEQMV--TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           +I    KIG+L E+   + +M     G   ++++++TLI+  C+ G+LE A  +   M +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +KYT+T LI GLC+A  +  AR   E M +     +  AYN ++    K G +D 
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 376 AINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           A  ++  M           T+++++   CK  +L  A++L+      G+       + ++
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 431 DGLRHSGCRREAKKIQSKIRMAKI 454
            GL  +    EA ++  ++R  K 
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKF 395



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 5/205 (2%)

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
           G  Y  V+ +  K G L +A +  E M ++     +V+YN LIN  C  G+   A  L  
Sbjct: 10  GDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQ 69

Query: 312 EMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            M+++   E D++T+  LI GLC +GN +GAR  L  M      +N+  Y+ I+  L K+
Sbjct: 70  SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            K + +  V E M       D F ++ ++    ++  +  A ++    ++SG +    + 
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRM 451
             ++ GL   G   E+ KI S++ M
Sbjct: 190 HILIHGLAKIGKLDESLKILSEMAM 214



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 59/135 (43%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FCK  +L +A  ++ +    G+  D  TY +LI    +    D    +  +MR
Sbjct: 332 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMR 391

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E     D V+  S + G  +   +  +  + +   + G  P+  ++  L   L +LG+ +
Sbjct: 392 EKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 451

Query: 130 EANRVFQDMICGDLT 144
           +A ++ +     D+T
Sbjct: 452 DAQKLMEPAKARDIT 466


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 207/450 (46%), Gaps = 37/450 (8%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C   R+  A A+  D +  G  P VVTY++L+DA C+   +     +L+
Sbjct: 162 TFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLD 221

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G  PD+VTYN LI        +  +L++L ++   G  PD  +Y  ++  L    
Sbjct: 222 EMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSE 281

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +F +M      P   TFN ++  LC+    D A+++   + +HG +P++VTY+
Sbjct: 282 RWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYS 341

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++ GLC  GR+  A  +L  L   G  P+ I YTT++K      +++   E+++ M   
Sbjct: 342 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCS 401

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D   + TVIA+  + G +  A   +EQM  +G   DIV+YN++I+  C E  ++ A
Sbjct: 402 DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDA 461

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR------LH---------------- 344
             LL  ++  G + D  T   L+ GLC     + A       +H                
Sbjct: 462 MELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITS 521

Query: 345 -------------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--VKDSF 389
                        L+ M + G   N   YN +VD L K GK   A+ +   M     D  
Sbjct: 522 LCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLI 581

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY++++ N+ KA ++  A  LL   + +G+
Sbjct: 582 TYNTVISNITKAGKMEEALDLLRVMVSNGL 611



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 6/414 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V + C+   +++A  ++      G +PD+VTY+ ++D  C     D    +L+R++
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD + Y +++ G         + +L+ EM+    PPD  ++N+++  L Q G  D
Sbjct: 365 SYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVD 424

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A +V + M      P   T+N +++GLC  R  D+A+ +   LQ +G  P++VT+N L+
Sbjct: 425 RAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLL 484

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC   R   A  ++  +  S   P+A T+ T++    +       +E L  M   G  
Sbjct: 485 KGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCI 544

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  V+ A +K G+ +EA   +  M T+G   D+++YNT+I+   K GK+E A  L
Sbjct: 545 PNQSTYNIVVDALLKAGKTQEALKLLSGM-TNGTP-DLITYNTVISNITKAGKMEEALDL 602

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M   G   D  T+  L  G+C+      A   L  +  +G   +   YN I+    +
Sbjct: 603 LRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQ 662

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + + D AI+ F  M     + D  TY  ++  L     L  A +LL++    GV
Sbjct: 663 NWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 197/431 (45%), Gaps = 10/431 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C   R+  AE +      LG    VVTYN +++ YC+    +    +++ M  
Sbjct: 102 NILIKRLCSGGRVADAERVFA---TLGASATVVTYNTMVNGYCRAGRIEDARRLISGM-- 156

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PD  T+N LI        +  +L + D+ML  G  P V +Y+ L+    +     +
Sbjct: 157 -PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M      P   T+N+++N +C     D AL +   L  HG  P+ VTY  ++K
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC + R +    +  E+  +  AP+ +T+ TI+    +       ++++  M   G   
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +++     +GR+ +A + + ++ + G + D ++Y T++   C   + E A  L+
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM       D+ T   +I  LC+ G +  A   +E M++ G + ++  YN I+D L  +
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             ID A+ +  +++      D  T+++++  LC   R   A +L+++ + S      +  
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 427 KAVVDGLRHSG 437
             V+  L   G
Sbjct: 516 NTVITSLCQKG 526



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 163/349 (46%), Gaps = 7/349 (2%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           +G    V +YN++++   + G+ ++A R+   M      P T TFN ++  LC      +
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPD 180

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           AL +F  +   G  P +VTY+IL+   CKA   R A  +L E+   G  P+ +TY  ++ 
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
                      L ILS +   G   D   Y  V+ +     R KE  +   +M ++    
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D V++NT++   C++G ++ A  ++D M + G   D  T++ ++DGLC  G +  A   L
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 401
             +   G   +  AY  ++  L    + +HA  +   M       D  T+++++ +LC+ 
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             +  A K++    ++G         +++DGL +  C  +A ++ S ++
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 132/324 (40%), Gaps = 50/324 (15%)

Query: 154 LNGLCKNRYTDNALRMFRGLQKHG----FVP-ELVTYNILIKGLCKAGRLRTARWILKEL 208
           L  L +    D+AL +   +   G     +P  +V  NILIK LC  GR+  A  +   L
Sbjct: 65  LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
           G S      +TY T++    R  + +    ++S M    +  D F +  +I A    GR+
Sbjct: 125 GASA---TVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRV 178

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +A    + M+  G    +V+Y+ L++  CK      A +LLDEM  +G E D  T+ +L
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY---------------------------- 360
           I+ +C  G++  A   L  +   G   +   Y                            
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 361 -------NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
                  N IV  L + G +D AI V + M     + D  TYSS++  LC   R+  A +
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358

Query: 410 LLLSCLKSGVRILKSAQKAVVDGL 433
           LL      G +    A   V+ GL
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGL 382


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 196/386 (50%), Gaps = 3/386 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FC    L++ + +  + +  G+  +VVTY+ L+   C+   +    T+LN M E GI
Sbjct: 110 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 169

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTY  LI G  ++   + ++DLL+ M+E G  P   +YN L+  L + G   +A +
Sbjct: 170 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 229

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL--QKHGFVPELVTYNILIKG 191
           + + MI         T+N ++ GLC     D AL++F  +   ++   P + T+N+LI G
Sbjct: 230 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 289

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LCK GRL  A  I +++   G   N +TY  ++  C +  K K  +E+   +   G+  +
Sbjct: 290 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 349

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  +I  F K+  L  A     +M T G+   +  YNTL+   CKEG LE A  L  
Sbjct: 350 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 409

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM     E D  +   +IDG  KAG+ +  +     M ++G   +   ++ +++RL K G
Sbjct: 410 EMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLG 469

Query: 372 KIDHAINVFESMEVKDSFTYSSMVHN 397
           ++D A +  E M V   FT  ++V++
Sbjct: 470 ELDEAKSALERM-VASGFTPDALVYD 494



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 198/401 (49%), Gaps = 6/401 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  + ++A  ++      G+ PDVVTY  LID  C+         +LN M E G  P 
Sbjct: 148 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN L++G  +  L+  +  +L  M+E G   DV +YN+LM  L   GK DEA ++F 
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            M   +  L P   TFN+++ GLCK      A+++ R + K G    LVTYN+L+ G  K
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           AG+++ A  + K++ D G  PN+ TY+ ++    + R   +   +   M+  G     F 
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 387

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++A+  K G L++A    ++M     + DI+S+NT+I+   K G  +    L  +M 
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 447

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G   D  T + LI+ L K G +  A+  LE M   GF  +   Y+ ++  L   G   
Sbjct: 448 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 507

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             IN+   M  K    D    S+++  LC + +     +LL
Sbjct: 508 EIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 217/439 (49%), Gaps = 6/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA +L++A  ++++    G  P+ VT   L+D  C+    D    +L  M++
Sbjct: 37  NTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK 96

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DVV Y +LI+G   N  L    +L DEML  GI  +V +Y+ L+H L +LG+  E
Sbjct: 97  KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKE 156

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN V   M    + P   T+  +++GLCK+    +A+ +   + + G  P  VTYN+L+ 
Sbjct: 157 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 216

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  A  IL+ + + G   + +TY T+MK      K    L++ ++M       
Sbjct: 217 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 276

Query: 251 DG--FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           +   F +  +I    K GRL +A     +MV  G   ++V+YN L+    K GK++ A  
Sbjct: 277 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 336

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  ++   GF  + +T++ILIDG CK   +  A+     M   G +  L  YN ++  L 
Sbjct: 337 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 396

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K+G ++ A ++F+ M       D  ++++M+    KA       +L +  ++ G+R    
Sbjct: 397 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 456

Query: 425 AQKAVVDGLRHSGCRREAK 443
               +++ L   G   EAK
Sbjct: 457 TFSTLINRLSKLGELDEAK 475



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 161/310 (51%), Gaps = 14/310 (4%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
            NI+L GLC+N     A+ + R + +    P++V+YN LI GLCKA +L+ A  +L E+ 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            +G  PN++T TT+M    ++ +    +E+L AMK+KG+  D   Y T+I+ F   G L 
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
              +  ++M+  G+  ++V+Y+ L++  C+ G+ + A  +L+ M + G   D  T+T LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DGLCK G    A   L  M + G + +   YN ++  L K+G +  A  +   M  K   
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLS------CLKSGVRILKSAQKAVVDGLRHSGCR 439
            D  TY++++  LC   ++  A KL  S      CL+  V         ++ GL   G  
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF----NMLIGGLCKEGRL 296

Query: 440 REAKKIQSKI 449
            +A KI  K+
Sbjct: 297 TKAVKIHRKM 306



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 6/359 (1%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N ++ G  RN  +  ++ L+ EM    + PD+ SYN+L++ L +  K  EA  +  +M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P + T   +++GLCK+   D A+ +   ++K GF  ++V Y  LI G C  G L  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
            + +  E+   G + N +TY+ ++    R  ++K    +L+AM   G   D   Y  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              K GR   A D +  MV  G +   V+YN L++  CKEG +  A+ +L  M ++G + 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYM--NKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           D  T+  L+ GLC  G +  A      M  N+   + N+  +N ++  L K+G++  A+ 
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 379 VFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +   M  K S     TY+ ++    KA ++  A +L    L  G          ++DG 
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 215/429 (50%), Gaps = 7/429 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           ++N  +  F K    E+A  +  + +   +  ++ TYN L+   C+        T+  +M
Sbjct: 421 IVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKM 479

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G++P  V+YNS+I G  R   L  +  +  +ML+ G+ P+V +Y+ LM   F+ G  
Sbjct: 480 LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDT 539

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  VF  M+  ++ P   T+NI +NGLCK   T  A  M +   + GFVP  +TYN +
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G  K G + +A    +E+ +SG +PN ITYTT++    +N    L L++ + M+ KG 
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  F K   ++ A+    +++  G+  + V YN+LI+ Y     +EAA  
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   M  +G  CD  T+T LIDGL K G +  A      M+  G   ++  Y  +++ L 
Sbjct: 720 LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779

Query: 369 KDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
             G++++A  +   ME +DS T     Y++++    KA  L  A +L    L  G+    
Sbjct: 780 GKGQLENAQKILAEME-RDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPND 838

Query: 424 SAQKAVVDG 432
           +    +++G
Sbjct: 839 TTYDILING 847



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 185/414 (44%), Gaps = 76/414 (18%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-------FVSFD---- 59
           N  +   C+   L+ A ++  D +  G+ P+V+TY++L+D Y +       F  FD    
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD 551

Query: 60  -------------------AGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
                               G T     +L +  E G  P  +TYNS++ G  +   +S 
Sbjct: 552 ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L    EM E G+ P+V +Y +L                                   +N
Sbjct: 612 ALTAYREMCESGVSPNVITYTTL-----------------------------------IN 636

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CKN  TD AL+M   ++  G   ++  Y  LI G CK   + TA W+  EL D G +P
Sbjct: 637 GFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSP 696

Query: 216 NAITYTTIMKCCFRN-RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           N++ Y +++   +RN    +  L +   M  +G + D   Y T+I   +K GRL  A D 
Sbjct: 697 NSVIYNSLIS-GYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M   G+  DI+ Y  LIN  C +G+LE A  +L EME+     +   +  LI G  K
Sbjct: 756 YSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFK 815

Query: 335 AGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
           AGN++ A RLH E ++K G   N   Y+ +++   K G  + A+    S++ KD
Sbjct: 816 AGNLQEAFRLHNEMLDK-GLTPNDTTYDILINGKIKGG--NSALKSLLSLKFKD 866



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 197/447 (44%), Gaps = 40/447 (8%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R     D+  YN L+++Y +    +      NR+ E+ I P +   N L+    +N ++ 
Sbjct: 167 RFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIY 226

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++ ++M+  G+  D ++ + +M    +    +EA + F +     +    A ++I++
Sbjct: 227 EAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVI 286

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPE--------------------------------- 181
              CKN   + A  + + ++  G+VP                                  
Sbjct: 287 QAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQ 346

Query: 182 --LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
             +V    L+KG CK  +L +A     ++ ++G +PN +TY  +++ C +N       ++
Sbjct: 347 MNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            + MK K      F   ++I  F+K+   +EA+   ++ V   +  +I +YN+L++  CK
Sbjct: 407 YTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCK 465

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           EGK+  A  L  +M  +G    K ++  +I G C+ GN+  A      M   G   N+  
Sbjct: 466 EGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVIT 525

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y+ ++D   K+G  ++A  VF+ M     V   FTY+  ++ LCK  R   A  +L   +
Sbjct: 526 YSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFV 585

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREA 442
           + G   +     +++DG    G    A
Sbjct: 586 EKGFVPVCLTYNSIMDGFIKEGSVSSA 612



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 185/427 (43%), Gaps = 9/427 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N  E+A+   ++    GV  D   Y+++I A+C+ +  +    +L  MR+ G  P   
Sbjct: 256 KDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG 315

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T+ S+I    +   +  +L L DEM+  G+  +V    +L+    +  K   A   F  M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                +P   T+ +++   CKN     A  ++  ++     P +   N LI+G  K    
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E   +    N  TY +++    +  K      +   M  KG       Y ++
Sbjct: 436 EEASKLFDE-AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    + G L  A      M+  G++ ++++Y+ L++ Y K G  E A+ + D M  +  
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T+ I I+GLCK G    A+  L+   + GF      YN I+D   K+G +  A+ 
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALT 614

Query: 379 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
            +    ES    +  TY+++++  CK      A K+       G+ +  +A  A++DG  
Sbjct: 615 AYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGF- 673

Query: 435 HSGCRRE 441
              C+++
Sbjct: 674 ---CKKQ 677


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 211/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            C+  R+ +A A++   +  G+ PD +TY   +D  C+     +   +L +M E + I P
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I G  ++   S S +L  EM + GI P++ +YN ++      G+   A R+ 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TYN +I G CK 
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +P+  T+TT++      ++   G+E+L  M R+G   +   Y
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D  +QM++ GV  DIV+ NTL++  C  GKL+ A  +   M+K
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 316 -----------QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 612 ADAIIYITLIYGFRKVG 628



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 205/455 (45%), Gaps = 55/455 (12%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC  ++L  A +      +LG+ PDVVT+  L+   C          + +++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                PDV+T+ +L+ G  R   +  ++ LLD M+E G+ PD  +Y + +  + ++G   
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++GLCK+    ++  +F  +Q  G  P +VTYN +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A+ +L+E+ +   +PN +TY  ++    +  K+    E+   M  +G 
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A D    M T G   D+ ++ TLI+ YC   +++    
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL EM ++G   +  T+  LI G C  G++  A    + M   G   ++   N ++D L 
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 369 KDGKIDHAINVFESME-------------------------------------------- 384
            +GK+  A+ +F++M+                                            
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534

Query: 385 ------VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
                 V D+ TYSSM+  LCK  RL  A+++ +S
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 11/314 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK +RL+ AE +       G  PDV T+  LID YC     D G  +L+ M   G+  +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L+ +LDL  +M+  G+ PD+ + N+L+  L   GK  +A  +F+
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI++ GL        A  ++  +   G VP+ +TY
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+ T++    +  +   GLE+   M R
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D   Y T+I  F K+G +  A D  ++M++ GV  D ++   ++  +  + +LE 
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 306 AYLLLDEMEKQGFE 319
           A  +L+++++   E
Sbjct: 668 AVAMLEDLQRYQLE 681



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 163/342 (47%), Gaps = 11/342 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC + R   A+ ++ + +   + P+VVTYN LI+A+ +   F     + + M  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+ +TYNS+I G  +   L  + D+   M   G  PDV+++ +L+       + D+
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M    L   T T+N +++G C     + AL + + +   G  P++VT N L+ 
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471

Query: 191 GLCKAGRLRTARWILKELGDS-----------GHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           GLC  G+L+ A  + K +  S           G  P+ +TY  ++       K+    E+
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  +G   D   Y ++I    K  RL EAT     M +     ++V++NTLIN YCK
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 591

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            G+++    L  EM ++G   D   +  LI G  K GNI GA
Sbjct: 592 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 205/437 (46%), Gaps = 9/437 (2%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LE A  +  D +R   LP V+ +N L+ A  +    D   ++  +M    I  D+ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI      S L  +L    ++ ++G+ PDV ++ +L+H L    +  EA  +F   IC  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ-IC-- 178

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   TF  ++NGLC+      A+ +   + ++G  P+ +TY   + G+CK G   +A 
Sbjct: 179 -RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 203 WILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
            +L+++ +  H  PN + Y+ I+    ++ ++     +   M+ KG   +   Y  +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F   GR   A   +++M+   +  ++V+YN LIN + KEGK   A  L DEM  +G   +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+  +IDG CK   +  A      M   G   ++  +  ++D      +ID  + +  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M     V ++ TY++++H  C    L +A  L    + SGV         ++DGL  +G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 438 CRREAKKIQSKIRMAKI 454
             ++A ++   ++ +K+
Sbjct: 478 KLKDALEMFKAMQKSKM 494



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 2/193 (1%)

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           +I  L++A D    M+       ++ +N L+    +  + +    L  +ME++   CD Y
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           + TILI   C    +  A      + K+G   ++  +  ++  L  D ++  A+++F  +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D  T++++++ LC+  R+  A  LL   +++G++  +      VDG+   G    A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 444 KIQSKIRMAKISH 456
            +  K  M +ISH
Sbjct: 238 NLLRK--MEEISH 248


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 205/407 (50%), Gaps = 4/407 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +    ++A  +I + +  GV P+ +TY+ L+   C+    D    +L +M      PD
Sbjct: 337 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 396

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN +I G  R+     +  LL EM   GI P+V++Y+ ++H L Q G+P++A+ + +
Sbjct: 397 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 456

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L P    +  +++G C+      A  +F  + K   +P+L  YN LI GL K G
Sbjct: 457 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 516

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  +     ++ + G  PN  TY+ ++    +N   +   +++  M   G   +   Y 
Sbjct: 517 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 576

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++ ++ K   +++ +   + M+  GV LD   Y  LI+     G +EAA+ +L  +EK 
Sbjct: 577 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 636

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D + ++ LI GLCK  + + A   L+ M+K G D N+  YN ++D L K G I +A
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 696

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            NVF S+  K    +  TY+S++   CK   + +A  L    L +G+
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 743



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 215/449 (47%), Gaps = 4/449 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N+ +   C++  +E+A     D    G++PD  TY  LI+  C+    +    +
Sbjct: 255 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 314

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M  A + P+VV Y +LI G  R      +  ++ EM+  G+ P+  +Y++L+  L +
Sbjct: 315 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 374

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G+ D A+ + + M+     P T T+N+++ G  ++    +A R+   ++  G  P + T
Sbjct: 375 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 434

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLC++G    A  +L+E+   G  PNA  Y  ++    R     L  EI   M 
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +     D + Y ++I    K+GR++E+T Y  QM   G+  +  +Y+ LI+ Y K G LE
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 554

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +A  L+  M   G + +   +  L++   K+ +I+      + M   G   +   Y  ++
Sbjct: 555 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 614

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L   G ++ A  V   +E    V D   YSS++  LCK      A  +L    K GV 
Sbjct: 615 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 674

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                  A++DGL  SG    A+ + + I
Sbjct: 675 PNIVCYNALIDGLCKSGDISYARNVFNSI 703



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 199/406 (49%), Gaps = 4/406 (0%)

Query: 49  IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
           ++AYC+   FD    +L  MRE G   + VTYN LIAG  R+  +  +     +M + G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            PD ++Y +L++ L +  + +EA  +  +M C +L P    +  +++G  +    D A +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           M + +   G  P  +TY+ L++GLCK G++  A  +LK++    H P+ ITY  I++  F
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           R+   K    +LS M+  G + + + Y  +I    + G  ++A+D +E+M T G++ +  
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            Y  LI+ YC+EG +  A  + D+M K     D Y +  LI GL K G ++ +  +   M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 404
            + G   N   Y+ ++    K+G ++ A  + + M       +   Y  ++ +  K+  +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              S    S L  GV +       ++  L  SG    A ++ S I 
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 187/400 (46%), Gaps = 9/400 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   C++   EKA  ++ +    G+ P+   Y  LI  YC+  +      I ++M +
Sbjct: 436 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 495

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD+  YNSLI G ++   +  S     +M E G+ P+ ++Y+ L+H   + G  + 
Sbjct: 496 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 555

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ Q M+   L P    +  +L    K+   +     F+ +   G + +   Y ILI 
Sbjct: 556 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 615

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGY 248
            L  +G +  A  +L  +  +G  P+   Y++++   C   +R+   G  IL  M +KG 
Sbjct: 616 NLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG--ILDEMSKKGV 673

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I    K G +  A +    ++  G+  + V+Y +LI+  CK G +  A+ 
Sbjct: 674 DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFY 733

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L +EM   G   D + +++L  G   AG+++ A   +E M   G  S + ++N +VD   
Sbjct: 734 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS-ISSFNNLVDGFC 792

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           K GK+   + +   +     V ++ T  +++  L +A +L
Sbjct: 793 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 176/396 (44%), Gaps = 5/396 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +C+   +  A  I     ++ VLPD+  YN LI    +    +       +M+E G+
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+  TY+ LI G  +N  L  +  L+  ML+ G+ P+   Y  L+   F+    ++ + 
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 593

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M+   +      + I+++ L  +   + A R+  G++K+G VP++  Y+ LI GLC
Sbjct: 594 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC 653

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K      A  IL E+   G  PN + Y  ++    ++        + +++  KG   +  
Sbjct: 654 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 713

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y ++I    K+G +  A     +M+  G+  D   Y+ L       G LE A  L++EM
Sbjct: 714 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 773

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G      +   L+DG CK G ++     L  +   G   N      I+  L + GK+
Sbjct: 774 FLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832

Query: 374 DHAINVFESMEVKDSFT----YSSMVHNLCKAKRLP 405
                +F  ++ K S +    +SS+  ++    ++P
Sbjct: 833 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP 868



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 178/427 (41%), Gaps = 54/427 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  R+E++          G+LP+  TY+ LI  Y +    ++   ++ RM +
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ V Y  L+    ++  +         ML+ G+  D   Y  L+H L   G  + 
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 625

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV   +      P    ++ +++GLCK    + A  +   + K G  P +V YN LI 
Sbjct: 626 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 685

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+G +  AR +   +   G  PN +TYT+++    +         + + M   G T 
Sbjct: 686 GLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITP 745

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  +       G L++A   +E+M   G    I S+N L++ +CK GK++    LL
Sbjct: 746 DAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLL 804

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIK----------------GAR----LHLEYMN- 349
             +  +G   +  T   +I GL +AG +                  AR    L ++ +N 
Sbjct: 805 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 864

Query: 350 -KIGFD------------SNLE-------------------AYNCIVDRLGKDGKIDHAI 377
            KI  D             NL+                   +Y  IVD L + GK+  A+
Sbjct: 865 GKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 924

Query: 378 NVFESME 384
           N+ + M+
Sbjct: 925 NLLKEMD 931



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 158/348 (45%), Gaps = 18/348 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R+  I +     +  +E A  ++    + G +PDV  Y+ LI   C+    +  + I
Sbjct: 605 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 664

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M + G+ P++V YN+LI G  ++  +S + ++ + +L  G+ P+  +Y SL+    +
Sbjct: 665 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 724

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G    A  ++ +M+   +TP    ++++  G       + A+ +   +   G    + +
Sbjct: 725 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISS 783

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N L+ G CK G+++    +L  +   G  PNA+T   I+       K      I   ++
Sbjct: 784 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 843

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +K        + ++    +  G+               + LD+V  + +I  +CKEG L+
Sbjct: 844 QKTSESAARHFSSLFMDMINQGK---------------IPLDVV--DDMIRDHCKEGNLD 886

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
            A +L D +  +       ++  ++D LC+ G +  A   L+ M+K G
Sbjct: 887 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 4/205 (1%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           + + + A+ K+     A   + +M   G  L+ V+YN LI   C+ G +E A+    +ME
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G   D +T+  LI+GLCK+     A+  L+ M+      N+  Y  ++D   ++G  D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 375 HAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  + + M       +  TY ++V  LCK  ++  AS LL   ++   R        ++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
           +G      +++A ++ S++  A IS
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGIS 429



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 99/256 (38%), Gaps = 54/256 (21%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK+  +  A  +    +  G++P+ VTY  LID  C+       + + N M  
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+PD   Y+ L  G +    L  ++ L++EM   G    + S+N+L+    + GK  E
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQE 799

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC---------------KNRYTDNALRMFRGL-- 173
             ++   ++   L P   T   +++GL                + + +++A R F  L  
Sbjct: 800 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 859

Query: 174 --QKHGFVPELV----------------------------------TYNILIKGLCKAGR 197
                G +P  V                                  +Y  ++  LC+ G+
Sbjct: 860 DMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK 919

Query: 198 LRTARWILKELGDSGH 213
           L  A  +LKE+   G+
Sbjct: 920 LSEALNLLKEMDKRGN 935


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  + +  K   +++ + + ++ +   + P++ T+N +++ YC+  +      
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             +++ +AG+ PD  TY SLI G  RN  +  + ++   M + G   +  SY +L+H L 
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ +EA ++F DM   +  P   T+ +++  L  +     AL +F  +++ G  P + 
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +LI GLCK  ++  AR +L E+ + G  P+ +TY  ++    +        EIL  M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +      +   Y  +I    K  ++ +A   + +M+   +   +++YN+LI+  CK   L
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E+AY LL  M + G   D++T+++ ID LCK G ++ A    + +   G  +N   Y  +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K GKID A ++ E M     + +S+TY+ ++  LCK K++  AS L+   L  GV
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575

Query: 420 R 420
           +
Sbjct: 576 K 576



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 200/472 (42%), Gaps = 39/472 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V  +CK   + +AE      ++ G+ PD  TY  LI  +C+    D  Y +   M 
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G   + V+Y +LI G      ++ +L L  +M E    P V +Y  L++ L   G+  
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +M      P   T+ ++++GLCK    D A +M   + + G +P +VTYN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL------------ 237
            G CK G +  A  IL  +  +   PN  TY  ++    + RK    +            
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 238 -----------------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                                   +LS M   G   D + Y   I    K GR++EA   
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + +   GV+ + V Y  LI+ YCK GK++ AY LL+ M       + YT+ +LI+GLCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
              +K A   +  M  +G    +  Y  ++  + KDG  DHA+ VF  M       D  T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           Y++ +H       L     ++    + G+         ++DG    G    A
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 22/451 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK N++++A  ++ +    G++P VVTYN LID YC+    D  + IL+ M      P+
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN LI G  +   +  ++ LL++MLE  + P + +YNSL+H   ++   + A R+  
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   T+++ ++ LCK    + A  +F  ++  G     V Y  LI G CK G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  +L+ + +    PN+ TY  +++   + +K K    +++ M   G       Y 
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K G    A      MV+ G Q D+ +Y   ++ Y  +G LE    ++ +M ++
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH- 375
           G   D  T+T+LIDG  + G    A   L+ M   G   +L   + ++  L  + ++   
Sbjct: 644 GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703

Query: 376 -----------------AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
                            A+ +FE M       D   Y +++   C+ +RL  A  L+   
Sbjct: 704 RSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 763

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            + G+   +    +++D     G   EA ++
Sbjct: 764 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 794



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 167/347 (48%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V TY +LID  C+    D    +L+ M E G+ P VVTYN+LI G  +  ++  +
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            ++LD M      P+  +YN L+  L +  K  +A  +   M+   L+P   T+N +++G
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    ++A R+   + ++G VP+  TY++ I  LCK GR+  A  +   +   G   N
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + YT ++    +  K  +   +L  M       + + Y  +I    K  ++KEA+  + 
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+T GV+  +V+Y  LI    K+G  + A  + + M   G++ D  T+T  +      G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            ++     +  MN+ G   +L  Y  ++D   + G    A +  + M
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 4/372 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +N   E    P +  YN+++   ++  L+     +  E+L   I P+++++N++++   +
Sbjct: 147 MNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G   EA      ++   L P T T+  ++ G C+N+  DNA  +F  + + G     V+
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLC+AGR+  A  +  ++ +    P   TYT ++     + +    L + + MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   +   Y  +I    K  ++ EA   + +M   G+   +V+YN LI+ YCKEG ++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ +LD ME      +  T+  LI GLCK   +  A   L  M +     +L  YN ++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
               K   ++ A  +   M     V D +TYS  +  LCK  R+  A  L  S    GV+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 421 ILKSAQKAVVDG 432
             +    A++DG
Sbjct: 507 ANEVIYTALIDG 518



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 183/406 (45%), Gaps = 24/406 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           T CK  R+E+A   + D ++  GV  + V Y  LID YC+    D  Y++L RM      
Sbjct: 483 TLCKEGRVEEA-GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+  TYN LI G  +   +  +  L+ +ML MG+ P V +Y  L+  + + G  D A +V
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F  M+     P   T+   L+        +    +   + + G +P+LVTY +LI G  +
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNR-----------------KYKLG 236
            G    A   LK + D+G  P+    + ++K     NR                 +Y++ 
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIA 721

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L++   M   G T D   Y  +IA F +  RL+EA   +  M   G+      YN+L++ 
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK G    A  L+D M + G      ++ +L+ GL   G+ + A+     +   G++ +
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             A+  ++D L K   +D    + + ME K    +  TYS ++  L
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 197/451 (43%), Gaps = 24/451 (5%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  N  +C  CK  ++ KA A++   +   + P ++TYN LI   C+    ++ Y +L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M E G+ PD  TY+  I    +   +  +  L D +   G+  +   Y +L+    ++
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK D A  + + M+     P + T+N+++ GLCK +    A  +   +   G  P +VTY
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI  + K G    A  +   +   G+ P+  TYT  +   F     +   ++++ M  
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-- 303
           +G   D   Y  +I  + ++G    A D+++ MV  G +  +   + LI     E ++  
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 304 ----------------EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
                           E A  L ++M + G   D   +  LI G C+   ++ A+  + +
Sbjct: 703 TRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAK 402
           M + G   + + YN ++D   K G    A+ + ++M V++       +Y  +V  L    
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM-VENGLLPLLESYKLLVCGLYIEG 821

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
               A  +    L  G    + A K ++DGL
Sbjct: 822 SNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 852



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 4/350 (1%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E    P +  YN+++  L +    DE   V+ +++   ++P   TFN M+NG CK     
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A      + + G  P+  TY  LI G C+   +  A  +   +   G   N ++YT ++
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
                  +    L++ + M           Y  +I A    GR  EA +   +M   G +
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            ++ +Y  LI+  CKE K++ A  +L EM ++G      T+  LIDG CK G I  A   
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDS---FTYSSMVHNLCK 400
           L+ M       N   YN ++  L K  K+  A+ +   M E K S    TY+S++H  CK
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              L SA +LL    ++G+   +      +D L   G   EA  +   ++
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 209/418 (50%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++PD+VT ++LI+ +C        +++L ++ + G  P+ +  N+L+ G      +  S
Sbjct: 40  GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   D  SY  L++ L ++G+   A ++ + +      P    ++ +++G
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++  D A  ++  +   G  P+++TY  LI G C AG+L  A  +L E+      PN
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY T++    +  K K    +L+ M +KG   D   Y  ++  +  +G +++A     
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV  GV  D+ SYN +IN  CK  +++ A  LL EM  +    D  T++ LIDGLCK G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I       + M+  G  +NL  YN ++D L K+  +D AI +F  M+ +    + +TY+
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 399

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++  LCK  RL     L    L  G  I       ++ GL   G   EA  ++SK+ 
Sbjct: 400 ALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 210/419 (50%), Gaps = 6/419 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T +LN  +   C    ++K+       +  G   D V+Y +L++  C+         +L
Sbjct: 79  NTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLL 138

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             + +    PDVV Y+++I G  ++ L+  + DL  EM   GI PDV +Y +L+ C F L
Sbjct: 139 RTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI-CGFCL 197

Query: 126 -GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+  EA  +  +MI  ++ P   T+N +++ LCK      +  +   + K G  P++V 
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+IL+ G C  G ++ A+ I   +  +G  P+  +Y  I+    + ++    + +L  M 
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K    D   Y ++I    K+GR+    D  ++M   G   ++V+YN+L++  CK   L+
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L  +M+++G + +KYT+T LIDGLCK G +K  +   +++   G+  ++  Y  ++
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMI 437

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             L K+G  D A+ +   ME    + ++ T+  ++ +L +      A KLL   +  G+
Sbjct: 438 SGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 4/293 (1%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P    F  +L  L K ++    + + + ++  G VP+LVT +ILI   C  G++  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           L ++   G+ PN I   T+MK      + K  L     +  +G+  D   Y  ++    K
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           IG  + A   +  +     + D+V Y+T+I+  CK+  ++ AY L  EM  +G   D  T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           +T LI G C AG +  A   L  M     + N+  YN ++D L K+GK+  + N+   M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            K    D   YS ++   C    +  A ++ L  +++GV     +   +++GL
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 105/205 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  R+++A  ++ + +   ++PD VTY+ LID  C+         +   M  
Sbjct: 294 NIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHH 353

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   ++VTYNSL+ G  +N  L  ++ L  +M E GI P+ ++Y +L+  L + G+  +
Sbjct: 354 RGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKK 413

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +FQ ++         T+ +M++GLCK    D AL M   ++ +G +P  VT+ I+I+
Sbjct: 414 GQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIR 473

Query: 191 GLCKAGRLRTARWILKELGDSGHAP 215
            L +      A  +L E+   G  P
Sbjct: 474 SLLEKDENDKAEKLLHEMIAKGLLP 498



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 4/237 (1%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H P  I +  I+    + + Y   + +   M+ KG   D      +I  F  +G++  + 
Sbjct: 6   HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             + +++  G Q + +  NTL+   C +G+++ +    D++  QGF+ D+ ++ IL++GL
Sbjct: 66  SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G  + A   L  +       ++  Y+ I+D L KD  +D A +++  M  +    D 
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            TY++++   C A +L  A  LL   +   +         ++D L   G  +E+K +
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  + +  K   +++ + + ++ +   + P++ T+N +++ YC+  +      
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             +++ +AG+ PD  TY SLI G  RN  +  + ++   M + G   +  SY +L+H L 
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ +EA ++F DM   +  P   T+ +++  L  +     AL +F  +++ G  P + 
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +LI GLCK  ++  AR +L E+ + G  P+ +TY  ++    +        EIL  M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +      +   Y  +I    K  ++ +A   + +M+   +   +++YN+LI+  CK   L
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E+AY LL  M + G   D++T+++ ID LCK G ++ A    + +   G  +N   Y  +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K GKID A ++ E M     + +S+TY+ ++  LCK K++  AS L+   L  GV
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575

Query: 420 R 420
           +
Sbjct: 576 K 576



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 188/426 (44%), Gaps = 39/426 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V  +CK   + +AE      ++ G+ PD  TY  LI  +C+    D  Y +   M 
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G   + V+Y +LI G      ++ +L L  +M E    P V +Y  L++ L   G+  
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +M      P   T+ ++++GLCK    D A +M   + + G +P +VTYN LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL------------ 237
            G CK G +  A  IL  +  +   PN  TY  ++    + RK    +            
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 238 -----------------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                                   +LS M   G   D + Y   I    K GR++EA   
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + +   GV+ + V Y  LI+ YCK GK++ AY LL+ M       + YT+ +LI+GLCK
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
              +K A   +  M  +G    +  Y  ++  + KDG  DHA+ VF  M       D  T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 391 YSSMVH 396
           Y++ +H
Sbjct: 617 YTAFLH 622



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 197/434 (45%), Gaps = 45/434 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI------------ 64
            CK N++++A  ++ +    G++P VVTYN LID YC+    D  + I            
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403

Query: 65  -----------------------LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
                                  LN+M E  +SP ++TYNSLI G  + + L  +  LL 
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M E G+ PD W+Y+  +  L + G+ +EA  +F  +    +      +  +++G CK  
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A  +   +     +P   TYN+LI+GLCK  +++ A  ++ ++   G  P  +TYT
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    ++  +   L++ + M   GY  D   Y   + A+   G L+E  D + +M  +
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  D+V+Y  LI+ Y + G    A+  L  M   G +   Y  +ILI  L     +K  
Sbjct: 644 GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
           R      ++IG DS     +  +  + K  + + A+ +FE M       D   Y +++  
Sbjct: 704 R------SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 757

Query: 398 LCKAKRLPSASKLL 411
            C+ +RL  A  L+
Sbjct: 758 FCQQERLEEAQGLV 771



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 167/347 (48%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V TY +LID  C+    D    +L+ M E G+ P VVTYN+LI G  +  ++  +
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            ++LD M      P+  +YN L+  L +  K  +A  +   M+   L+P   T+N +++G
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHG 448

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    ++A R+   + ++G VP+  TY++ I  LCK GR+  A  +   +   G   N
Sbjct: 449 QCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN 508

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + YT ++    +  K  +   +L  M       + + Y  +I    K  ++KEA+  + 
Sbjct: 509 EVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+T GV+  +V+Y  LI    K+G  + A  + + M   G++ D  T+T  +      G
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            ++     +  MN+ G   +L  Y  ++D   + G    A +  + M
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 4/372 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +N   E    P +  YN+++   ++  L+     +  E+L   I P+++++N++++   +
Sbjct: 147 MNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G   EA      ++   L P T T+  ++ G C+N+  DNA  +F  + + G     V+
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLC+AGR+  A  +  ++ +    P   TYT ++     + +    L + + MK
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   +   Y  +I    K  ++ EA   + +M   G+   +V+YN LI+ YCKEG ++
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ +LD ME      +  T+  LI GLCK   +  A   L  M +     +L  YN ++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
               K   ++ A  +   M     V D +TYS  +  LCK  R+  A  L  S    GV+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 421 ILKSAQKAVVDG 432
             +    A++DG
Sbjct: 507 ANEVIYTALIDG 518



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 181/408 (44%), Gaps = 31/408 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           ++ + T CK  R+E+A   + D ++  GV  + V Y  LID YC+    D  Y++L RM 
Sbjct: 478 SVFIDTLCKEGRVEEA-GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+  TYN LI G  +   +  +  L+ +ML MG+ P V +Y  L+  + + G  D
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A +VF  M+     P   T+   L+        +    +   + + G +P+LVTY +LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC----------------------- 226
            G  + G    A   LK + D+G  P+    + ++K                        
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVN 716

Query: 227 ------CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
                  ++  +Y++ L++   M   G T D   Y  +IA F +  RL+EA   +  M  
Sbjct: 717 SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 776

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+      YN+L++  CK G    A  L+D M + G      ++ +L+ GL   G+ + 
Sbjct: 777 RGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEK 836

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 388
           A+     +   G++ +  A+  ++D L K   +D    + + ME KD+
Sbjct: 837 AKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDA 884



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 197/462 (42%), Gaps = 35/462 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  N  +C  CK  ++ KA A++   +   + P ++TYN LI   C+    ++ Y +L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M E G+ PD  TY+  I    +   +  +  L D +   G+  +   Y +L+    ++
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK D A  + + M+     P + T+N+++ GLCK +    A  +   +   G  P +VTY
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI  + K G    A  +   +   G+ P+  TYT  +   F     +   ++++ M  
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-- 303
           +G   D   Y  +I  + ++G    A D+++ MV  G +  +   + LI     E ++  
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 304 ---------------------------EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
                                      E A  L ++M + G   D   +  LI G C+  
Sbjct: 703 TRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 762

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TY 391
            ++ A+  + +M + G   + + YN ++D   K G    A+ + ++M V++       +Y
Sbjct: 763 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM-VENGLLPLLESY 821

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             +V  L        A  +    L  G    + A K ++DGL
Sbjct: 822 KLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 4/350 (1%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E    P +  YN+++  L +    DE   V+ +++   ++P   TFN M+NG CK     
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A      + + G  P+  TY  LI G C+   +  A  +   +   G   N ++YT ++
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
                  +    L++ + M           Y  +I A    GR  EA +   +M   G +
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            ++ +Y  LI+  CKE K++ A  +L EM ++G      T+  LIDG CK G I  A   
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDS---FTYSSMVHNLCK 400
           L+ M       N   YN ++  L K  K+  A+ +   M E K S    TY+S++H  CK
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              L SA +LL    ++G+   +      +D L   G   EA  +   ++
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 215/441 (48%), Gaps = 6/441 (1%)

Query: 11  NICVCTFCKANRLEKA-EAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           NI +   C  NR ++A E + I     G   PDVV+Y+ +I+ + +    D  Y+  N M
Sbjct: 55  NILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEM 114

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  ISP+VVTYNS+IA   +   +  ++++L  M++ G+ PD  +YNS++H     G+P
Sbjct: 115 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQP 174

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA    + M    + P   T+N +++ LCKN     A ++F  + K G  PE+ TY  L
Sbjct: 175 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTL 234

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           ++G    G L     +L  +  +G  PN   ++ ++    +  K +  + + S M+++G 
Sbjct: 235 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 294

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  VI    K GR+++A  Y EQM+ +G+    + YN+LI+  C   K E A  
Sbjct: 295 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 354

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L+ EM  +G   +      +ID  CK G +  +    + M +IG   ++  Y+ ++D   
Sbjct: 355 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 414

Query: 369 KDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             GK+D A  +  SM       D  TYS++++  CK  R+  A  L      SGV     
Sbjct: 415 LAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDII 474

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++ GL  +     AK++
Sbjct: 475 TYNIILQGLFQTRRTAAAKEL 495



 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 215/439 (48%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA  ++   ++ GV+PD +TYN ++  +C           L +MR 
Sbjct: 127 NSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS 186

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTYNSL+    +N   + +  + D M + G+ P++ +Y +L+      G   E
Sbjct: 187 DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 246

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   + P    F+I++    K    + A+ +F  +++ G  P  VTY  +I 
Sbjct: 247 MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIG 306

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+GR+  A    +++ D G +P  I Y +++       K++   E++  M  +G   
Sbjct: 307 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 366

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + ++I +  K GR+ E+    + MV  GV+ DI++Y+TLI+ YC  GK++ A  LL
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M   G + D  T++ LI+G CK   +K A +    M   G   ++  YN I+  L + 
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486

Query: 371 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +   A    + + +S    +  TY+ ++H LCK K    A ++  +     +++     
Sbjct: 487 RRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 546

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++D L   G   EAK +
Sbjct: 547 NIMIDALLKVGRNDEAKDL 565



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 153/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  + + CK  R+ ++E +    +R+GV PD++TY+ LID YC     D    +
Sbjct: 366 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 425

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD VTY++LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 426 LASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN+ TD+ALRMF+ L       E  T
Sbjct: 486 TRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEART 545

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +      +G  PN  TY  + +        +   ++  +M+
Sbjct: 546 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 605

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D      ++   ++ G +  A  Y+  +      L+  + +  I+L    GK +
Sbjct: 606 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQ 664

Query: 305 AAYLLLDEMEKQGFE 319
             +  L E  K   E
Sbjct: 665 EYHRFLPEKYKSFIE 679



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 190/410 (46%), Gaps = 43/410 (10%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+   +++L+ AY +    +    + ++MR+ G++P+ VTY ++I    ++  +
Sbjct: 255 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 314

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++ G+ P    YNSL+H L    K + A  +  +M+   +   T  FN +
Sbjct: 315 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P+++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 375 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY+T++                             GYC       KI R+K+A  
Sbjct: 435 KPDCVTYSTLIN----------------------------GYC-------KISRMKDALV 459

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M + GV  DI++YN ++    +  +  AA  L   + K G + +  T+ I++ GLC
Sbjct: 460 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLC 519

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K   +    L + + N    D  LEA  +N ++D L K G+ D A ++F +      V +
Sbjct: 520 K-NKLTDDALRM-FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +TY  M  N+     L    +L LS   +G  +       +V  L   G
Sbjct: 578 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 155/316 (49%), Gaps = 11/316 (3%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTYN 186
           ++A  VF +++   + P   ++NI+LNGLC    +  AL +   +   G    P++V+Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I G  K G L        E+ D   +PN +TY +I+    + +     +E+L+ M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y +++  F   G+ KEA  ++++M +DGV+ D+V+YN+L++  CK G+   A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + D M K+G + +  T+  L+ G    G +      L+ M + G   N   ++ +V  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K  K++ A+ VF  M  +    ++ TY +++  LCK+ R+  A       +  G+   
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL--- 329

Query: 423 KSAQKAVVDGLRHSGC 438
            S    V + L H  C
Sbjct: 330 -SPGNIVYNSLIHGLC 344



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 200/431 (46%), Gaps = 20/431 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I VC + K  ++E+A  +     + G+ P+ VTY  +I   C+    +       +M
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+SP  + YNSLI G    +    + +L+ EML+ GI  +   +NS++    + G+ 
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTY+ L
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R++ A  + +E+  SG +P+ ITY  I++  F+ R+     E+   + + G 
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR 504

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     +A    + +    ++L+  ++N +I+   K G+ + A  
Sbjct: 505 QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 564

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L       G   + +T+ ++      A NI G  L LE ++++    ++E   C VD   
Sbjct: 565 LFVAFSSNGLVPNYWTYRLM------AENIIGQGL-LEELDQLFL--SMEDNGCTVD--- 612

Query: 369 KDGKIDHAI-NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV-----RIL 422
             G ++  +  + +  E+  + TY SM+     +    +AS L +  L  G      R L
Sbjct: 613 -SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS-LFIDLLSGGKYQEYHRFL 670

Query: 423 KSAQKAVVDGL 433
               K+ ++ L
Sbjct: 671 PEKYKSFIESL 681



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 7/153 (4%)

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYN 361
           E A  + DE+ ++G   D +++ IL++GLC     + A   L  M   G D   ++ +Y+
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++   K+G +D   + +  M  +    +  TY+S++  LCKA+ +  A ++L + +KS
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           GV        ++V G   SG  +EA     K+R
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR 185


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 211/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            C+  R+ +A A++   +  G+ PD +TY   +D  C+     +   +L +M E + I P
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I G  ++   S S +L  EM + GI P++ +YN ++      G+   A R+ 
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TYN +I G CK 
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +P+  T+TT++      ++   G+E+L  M R+G   +   Y
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D  +QM++ GV  DIV+ NTL++  C  GKL+ A  +   M+K
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 316 -----------QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 612 ADAIIYITLIYGFRKVG 628



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 205/455 (45%), Gaps = 55/455 (12%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC  ++L  A +      +LG+ PDVVT+  L+   C          + +++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                PDV+T+ +L+ G  R   +  ++ LLD M+E G+ PD  +Y + +  + ++G   
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++GLCK+    ++  +F  +Q  G  P +VTYN +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A+ +L+E+ +   +PN +TY  ++    +  K+    E+   M  +G 
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A D    M T G   D+ ++ TLI+ YC   +++    
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL EM ++G   +  T+  LI G C  G++  A    + M   G   ++   N ++D L 
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 369 KDGKIDHAINVFESME-------------------------------------------- 384
            +GK+  A+ +F++M+                                            
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534

Query: 385 ------VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
                 V D+ TYSSM+  LCK  RL  A+++ +S
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 11/309 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK +RL+ AE +       G  PDV T+  LID YC     D G  +L+ M   G+  +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L+ +LDL  +M+  G+ PD+ + N+L+  L   GK  +A  +F+
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI++ GL        A  ++  +   G VP+ +TY
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+ T++    +  +   GLE+   M R
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D   Y T+I  F K+G +  A D  ++M++ GV  D ++   ++  +  + +LE 
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667

Query: 306 AYLLLDEME 314
           A  +L++++
Sbjct: 668 AVAMLEDLQ 676



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 163/342 (47%), Gaps = 11/342 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC + R   A+ ++ + +   + P+VVTYN LI+A+ +   F     + + M  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+ +TYNS+I G  +   L  + D+   M   G  PDV+++ +L+       + D+
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M    L   T T+N +++G C     + AL + + +   G  P++VT N L+ 
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471

Query: 191 GLCKAGRLRTARWILKELGDS-----------GHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           GLC  G+L+ A  + K +  S           G  P+ +TY  ++       K+    E+
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  +G   D   Y ++I    K  RL EAT     M +     ++V++NTLIN YCK
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 591

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            G+++    L  EM ++G   D   +  LI G  K GNI GA
Sbjct: 592 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 205/437 (46%), Gaps = 9/437 (2%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LE A  +  D +R   LP V+ +N L+ A  +    D   ++  +M    I  D+ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI      S L  +L    ++ ++G+ PDV ++ +L+H L    +  EA  +F   IC  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ-IC-- 178

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   TF  ++NGLC+      A+ +   + ++G  P+ +TY   + G+CK G   +A 
Sbjct: 179 -RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 203 WILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
            +L+++ +  H  PN + Y+ I+    ++ ++     +   M+ KG   +   Y  +I  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F   GR   A   +++M+   +  ++V+YN LIN + KEGK   A  L DEM  +G   +
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+  +IDG CK   +  A      M   G   ++  +  ++D      +ID  + +  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M     V ++ TY++++H  C    L +A  L    + SGV         ++DGL  +G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 438 CRREAKKIQSKIRMAKI 454
             ++A ++   ++ +K+
Sbjct: 478 KLKDALEMFKAMQKSKM 494



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 2/193 (1%)

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           +I  L++A D    M+       ++ +N L+    +  + +    L  +ME++   CD Y
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           + TILI   C    +  A      + K+G   ++  +  ++  L  D ++  A+++F  +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D  T++++++ LC+  R+  A  LL   +++G++  +      VDG+   G    A 
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 444 KIQSKIRMAKISH 456
            +  K  M +ISH
Sbjct: 238 NLLRK--MEEISH 248


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 225/485 (46%), Gaps = 39/485 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--------- 54
           +L+   LNI V   CK ++++  +  +ID  + G+  D+VTYN LI+AYC+         
Sbjct: 182 ELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFE 241

Query: 55  -------------FVSFDA-------------GYTILNRMREAGISPDVVTYNSLIAGAT 88
                          +++A                + N M   G+SPD  TYN+L+  + 
Sbjct: 242 VMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESC 301

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           RN+    + D+  +ML  G+ PD+ S++SL+    + G  D+A   F+DM    L P   
Sbjct: 302 RNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV 361

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            + I++NG C+N     AL +   + + G   ++V YN ++ GLCK   L  A  +  E+
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            + G  P+  T+TT++    +       L +   M +K    D   Y  +I  F K   +
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEM 481

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A +   +M++  +  + +SY  L+N YC  G +  A+ L DEM ++G +    T   +
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTV 541

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I G C++G++  A   L  M   G   +   YN +++   K   +D A  +   ME K  
Sbjct: 542 IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGL 601

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY+ +++  C+  R+  A  +L   ++ G+   +S    +++G       +EA +
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFR 661

Query: 445 IQSKI 449
              ++
Sbjct: 662 FHDEM 666



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 171/318 (53%), Gaps = 2/318 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++PD V Y +LI+ YC+         I ++M E G + DVV YN+++ G  +  LL+ +
Sbjct: 355 GLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADA 414

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L DEM+E G+ PD  ++ +L+H   + G   +A  +F  M   ++ P   T+NI+++G
Sbjct: 415 NALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDG 474

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + A  ++  +      P  ++Y IL+ G C  G +  A  +  E+   G  P 
Sbjct: 475 FCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPT 534

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T  T++K   R+       E L  M  +G   D   Y T+I  FVK   + +A   + 
Sbjct: 535 LVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLIN 594

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M T G+Q D+V+YN ++N +C++G+++ A L+L +M ++G + D+ T+T LI+G     
Sbjct: 595 KMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQD 654

Query: 337 NIKGA-RLHLEYMNKIGF 353
           N+K A R H E + + GF
Sbjct: 655 NLKEAFRFHDEMLQR-GF 671



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 196/390 (50%), Gaps = 6/390 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R G+  +V T N++++A C+    D     L  M + GI  D+VTYN+LI    R  LL 
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++++ M   G+ P +++YN++++ L + G+   A  VF +M+   L+P T T+N +L
Sbjct: 238 EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
              C+N     A  +F  +   G  P+L++++ LI    + G L  A    +++  SG  
Sbjct: 298 VESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV 357

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ + YT ++    RN      LEI   M  +G   D   Y T++    K   L +A   
Sbjct: 358 PDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL 417

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++MV  GV  D  ++ TLI+ +CKEG +  A  L   M ++  + D  T+ ILIDG CK
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCK 477

Query: 335 AGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF- 389
              ++ A  L  E +++  F +++ +Y  +V+     G +  A  +++ M    +K +  
Sbjct: 478 TTEMEKANELWNEMISRKIFPNHI-SYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           T ++++   C++  L  A + L   +  GV
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGV 566



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 183/395 (46%), Gaps = 6/395 (1%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            +R+E  E++I      GV  D + +++LI +Y Q    + G      +R  G    +  
Sbjct: 95  VSRVEIVESLISMSSTCGV--DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINA 152

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
            NSL+ G  +   +  + ++ +E+   GI  +V++ N +++ L +  K D+      DM 
Sbjct: 153 CNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDME 212

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              +     T+N ++N  C+      A  +   +   G  P L TYN +I GLCK GR  
Sbjct: 213 QKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A+ +  E+   G +P+  TY T++    RN  +    +I S M  +G + D   + ++I
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               + G L +A  Y   M T G+  D V Y  LIN YC+ G +  A  + D+M +QG  
Sbjct: 333 GVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCA 392

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D   +  +++GLCK   +  A    + M + G   +   +  ++    K+G +  A+++
Sbjct: 393 LDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           F  M  K    D  TY+ ++   CK   +  A++L
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANEL 487



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 201/445 (45%), Gaps = 4/445 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + ++ + ++ +A +L +         R G L  +   N L+    +    D  + + N +
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             +GI  +V T N ++    ++  +      L +M + GI  D+ +YN+L++   + G  
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  V   M    L P   T+N ++NGLCK      A  +F  +   G  P+  TYN L
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +   C+      A+ I  ++   G +P+ I++++++    RN      L     MK  G 
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  + + G + EA +  ++M+  G  LD+V+YNT++N  CK+  L  A  
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L DEM ++G   D  T T LI G CK GN+  A      M +     ++  YN ++D   
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 369 KDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  +++ A  ++  M  +  F    +Y+ +V+  C    +  A +L    ++ G++    
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKI 449
               V+ G   SG   +A +   K+
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKM 561


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 197/417 (47%), Gaps = 3/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+L D VTYN LID  C    +     +L +M    + PD  T+N LI    +   +  +
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +L  M + G  PD+ +YN+LM          EA  +F  M+   L P    +N++++G
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK +  D A+ +F+ L     VP + +YN LI GLC +GR+   + +L E+  S   P+
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  ++    +  +    L +L  M +KG   +   Y  ++  +     +  A D   
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G++ DI++YN LIN YCK   ++ A +L  EM  +    D  ++  LIDGLC  G
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSS 393
            I   +  L+ M   G   ++  YN ++D   K    D AI++F  +      D +T  +
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHA 584

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +V NLCK ++L  A   L   L  G          +++ L   G   EA  + SK+ 
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 192/405 (47%), Gaps = 5/405 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK  R+ +A+ ++    + G  PD+VTYN L++ YC   +      + NRM 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PDV+ YN LI G  +  ++  ++ L  E+    + P + SYNSL+  L   G+  
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
              ++  +M      P   T+NI+++ LCK      AL +   + K G  P +VTYN ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A+ I   +  SG  P+ + Y  ++    +       + +   M+ K   
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I     +GR+    + +++M   G   D+++YN L++ +CK    + A  L
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             ++  +G   D YT+  ++D LCK   +K A   L+++   G   N++ Y  +++ L K
Sbjct: 568 FRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
           DG    A+ +   ME      D+ T+  ++  L +      A KL
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 194/413 (46%), Gaps = 4/413 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FC    + KA     + +  G L D  TY  LI+   +     A   +L  M 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++ + P++V Y++LI G  ++  +S +L L  ++ E GI  D  +YNSL+     +G+  
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  ++   M+  ++ P   TFNI+++ LCK      A  +   + K G  P++VTYN L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C    +  AR +   +   G  P+ + Y  ++    + +     + +   +  K   
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y ++I      GR+      +++M       D+V+YN LI+  CKEG++  A  +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M K+G + +  T+  ++DG C   N+  A+     M K G + ++  YN +++   K
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              +D AI +F+ M     + D  +Y+S++  LC   R+P   +LL     SG
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 45/442 (10%)

Query: 53  CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           C+F + D   T  NRM      P    ++ L+    R      ++ L  ++   GI P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------------- 158
            ++  L++C F       A  +   ++     P   TFN ++NG C              
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 159 ---------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
                                KN     AL + + ++K    P LV Y+ LI GLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +  ++G+ G   +A+TY +++  C    +++   ++L+ M R+    D + +  
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I A  K GR+ EA   +  M   G + DIV+YN L+  YC    +  A  L + M K+G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E D   + +LIDG CK   +  A +  + +        + +YN ++D L   G+I H  
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 378 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            + + M    +  D  TY+ ++  LCK  R+  A  +L+  +K GV+       A++DG 
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450

Query: 434 RHSGCRREAKKIQSKI--RMAK 453
               C R    +   I  RM K
Sbjct: 451 ----CLRNNVNVAKDIFNRMVK 468



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 193/388 (49%), Gaps = 4/388 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + T+ +LI+ Y         +++L  + ++G  P++VT+N++I G   N ++  +
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           LD    +L  G   D ++Y +L++ L + G+   A  + Q+M    + P    ++ +++G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+ +  +AL +   + + G + + VTYN LI G C  GR +    +L ++      P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    +  +      +L+ M ++G   D   Y  ++  +     + EA +   
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G++ D+++YN LI+ YCK   ++ A +L  E+  +       ++  LIDGLC +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I   +  L+ M+      ++  YN ++D L K+G+I  A+ V   M  K    +  TY+
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +M+   C    +  A  +    +KSG+ 
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLE 472



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 1/163 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+   + ++ +    G  PDV+TYN+L+DA+C+   FD   ++  ++ E GI PD
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T ++++    +   L  + D L  +L  G  P+V +Y  L++ L + G   EA  +  
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
            M   D  P   TF I++  L +   TD A ++   +   G V
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 220/445 (49%), Gaps = 4/445 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +  FC+  +L  A + +   I+LG  P+ +T++ LI+  C          +++RM 
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD++T N+L+ G   +   + ++ L+D+M+E G  P+  +Y  +++ + + G+  
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M   ++      ++I+++GLCK+   DNA  +F  ++  G    ++TYNILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C AGR      +L+++      PN +T++ ++    +  K +   E+   M  +G  
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K   L +A   ++ MV+ G   +I ++N LIN YCK  +++    L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M  +G   D  T+  LI G C+ G +  A+   + M       N+  Y  ++D L  
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+ + A+ +FE +E      D   Y+ ++H +C A ++  A  L  S    GV+     
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              ++ GL   G   EA+ +  K+ 
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKME 570



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 1/370 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     +I +   CK   L+ A  +  +    G+  +++TYN+LI  +C    +D G  
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M +  I+P+VVT++ LI    +   L  + +L  EM+  GI PD  +Y SL+    
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    D+AN++   M+     P   TFNI++NG CK    D+ L +FR +   G V + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+G C+ G+L  A+ + +E+      PN +TY  ++     N + +  LEI   +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D   Y  +I       ++ +A D    +   GV+  + +YN +I   CK+G L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A LL  +ME+ G   D +T+ ILI      G+   +   +E + + GF  +      +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619

Query: 364 VDRLGKDGKI 373
           +D L  DG++
Sbjct: 620 IDMLS-DGRL 628



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 205/428 (47%), Gaps = 4/428 (0%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I    LP V+ ++ L  A  +   +D    +  +M   GI+ ++ T + +I    R  
Sbjct: 78  DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  +   + +++++G  P+  ++++L++ L   G+  EA  +   M+     P   T N
Sbjct: 138 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 197

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            ++NGLC +     A+ +   + ++G  P  VTY  ++  +CK+G+   A  +L+++ + 
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               +A+ Y+ I+    ++        + + M+ KG T +   Y  +I  F   GR  + 
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +  M+   +  ++V+++ LI+ + KEGKL  A  L  EM  +G   D  T+T LIDG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
            CK  ++  A   ++ M   G D N+  +N +++   K  +ID  + +F  M     V D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + TY++++   C+  +L  A +L    +   V       K ++DGL  +G   +A +I  
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497

Query: 448 KIRMAKIS 455
           KI  +K+ 
Sbjct: 498 KIEKSKME 505



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 166/344 (48%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D V Y+++ID  C+  S D  + + N M   GI+ +++TYN LI G            LL
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M++  I P+V +++ L+    + GK  EA  + ++MI   + P T T+  +++G CK 
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            + D A +M   +   G  P + T+NILI G CKA R+     + +++   G   + +TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+++      K  +  E+   M  +    +   Y  ++      G  ++A +  E++  
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
             ++LDI  YN +I+  C   K++ A+ L   +  +G +    T+ I+I GLCK G +  
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           A L    M + G   +   YN ++     DG    ++ + E ++
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 4/311 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +F+DMI     P    F+ + + + K +  D  L + + ++  G    L T +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +L  A   + ++   G+ PN IT++T++       +    LE++  M   
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+  D     T++      G+  EA   +++MV  G Q + V+Y  ++N+ CK G+   A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +ME++  + D   ++I+IDGLCK G++  A      M   G  +N+  YN ++  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
               G+ D    +   M  +    +  T+S ++ +  K  +L  A +L    +  G+   
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 423 KSAQKAVVDGL 433
                +++DG 
Sbjct: 368 TITYTSLIDGF 378



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N L+KA  ++   +  G  P++ T+N+LI+ YC+    D G  +  +M   G+  D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L+ + +L  EM+   +PP++ +Y  L+  L   G+ ++A  +F+
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497

Query: 137 -------------------------------DMICG----DLTPCTATFNIMLNGLCKNR 161
                                          D+ C      + P   T+NIM+ GLCK  
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +FR +++ G  P+  TYNILI+     G    +  +++EL   G + +A T  
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++      R  K  L++LS
Sbjct: 618 MVIDMLSDGRLKKSFLDMLS 637


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 202/410 (49%), Gaps = 5/410 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    NI +   CK  +L+KA+  +      GV P++VTYN ++  YC     +A   
Sbjct: 218 KSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           IL  M+   I PD  TY SLI+G  +   L  +  + +EM++ G+ P    YN+L+    
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  D A+    +M+   ++P  +T+N +++ L   + TD A  M + +Q+ G  P+ +
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYNILI G C+    + A  +  E+  SG  P   TYT+++    +  + K   ++   +
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D   +  +I        +K A + ++ M    V  D V++NT++  +C+EGK+
Sbjct: 458 TSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L DEM+++G + D  +   LI G  + G+IK A      M   GF+  +  YN +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
           V  L K+ + D A  + + M  K    D  TY +++  + K   +P  +K
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV-NIPDENK 626



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 211/432 (48%), Gaps = 14/432 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K NR E A  +  +  RL +   V T+N++I+  C+          +  M  
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+ P++VTYN+++ G   +  +  +  +L  M    I PD ++Y SL+  + + G+ +E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++F++M+   L P    +N +++G C     D A      + K G  P + TYN LI 
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILSAMKRK 246
            L    R   A  ++KE+ + G +P+AITY  ++    +C    + + L  E+L++    
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLAS---- 425

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y +++    K  R+KEA D  +++ ++GV  D + +N LI+ +C    ++ A
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGA 485

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + LL +M++     D+ T   ++ G C+ G ++ AR   + M + G   +  ++N ++  
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545

Query: 367 LGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
             + G I  A  V   M +   F     TY+++V  LCK +    A +LL   +  G+  
Sbjct: 546 YSRRGDIKDAFRVRNEM-LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604

Query: 422 LKSAQKAVVDGL 433
             +    +++G+
Sbjct: 605 DDTTYFTLIEGI 616



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 156/328 (47%), Gaps = 11/328 (3%)

Query: 95  CSLDLLDE-------MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           C ++  DE       M E G+ P + + NSL+    +L + + A  ++ +M    +    
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            TFNIM+N LCK      A      ++  G  P +VTYN ++ G C +GR+  A  IL  
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT 281

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +      P++ TY +++    +  + +   +I   M +KG       Y T+I  F   G 
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L  A+ Y ++M+  G+   + +YN+LI+    E + + A  ++ E++++G   D  T+ I
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           LI+G C+  N K A L  + M   G     + Y  ++  L K  ++  A ++F+ +    
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            + D+  +++++   C    +  A +LL
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELL 489


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 189/375 (50%), Gaps = 2/375 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   C    L +A     + +     PD V +N+L+   C+         ++  M E GI
Sbjct: 147 VQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYNSLI G  ++  +  +  LL+ M++  + P++ +YN+L++   + G    A++
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + + MI     P   TFN +++G C+    D A  +   ++K    P LVTYN+LI GLC
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLC 324

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            AGR   A  +L E+   G  P+ ITY +++    RN + +   +I + M  +G   DG 
Sbjct: 325 DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            YCT+  A +K  R  EA   ++ M   G   ++ ++N+L+   C   +L+ A  LL  M
Sbjct: 385 SYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVM 444

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G +    T+ +L+ GLCKAG +  A+  L  M   G    + +   IV  L ++GK 
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQ 504

Query: 374 DHAINVFESMEVKDS 388
           D A++ F+ +   +S
Sbjct: 505 DLALHYFDQVVAAES 519



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 211/428 (49%), Gaps = 9/428 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDV--VTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           T  KA R  +A  I  D + LG   D   +TYN LI  +C+    +  + +L  M+E G 
Sbjct: 78  TLVKARRHHQAYQIFRDEL-LGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGH 136

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVVT++S++        LS ++    E +E    PD   +N L+H L +  +  EA +
Sbjct: 137 SPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQ 194

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M    + P   T+N +++GLCK+   + A ++   + K    P LVTYN LI G C
Sbjct: 195 MIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYC 254

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G    A  +++ +  SG  P+ +T+ +++    +  K     E+L  MK+     +  
Sbjct: 255 KTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLV 314

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I+     GR  EA + + +M   G+  DI++YN+LI ++C+  ++E A+ + + M
Sbjct: 315 TYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLM 374

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G   D  ++  L   L K+     A   L+ M   G   NL  +N +++ L    ++
Sbjct: 375 VERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRL 434

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A ++   M        + TY  +V  LCKA R+  A ++L+  +  G++ L S+   +
Sbjct: 435 DEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTI 494

Query: 430 VDGLRHSG 437
           V  L   G
Sbjct: 495 VHTLAREG 502



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 187/372 (50%), Gaps = 6/372 (1%)

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TYN+LI G  +   +  +  LL EM E G  PDV +++S++  L   G    A + F++
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
            +  +  P +  FNI+++GLCK      A +M   + + G VP++VTYN LI GLCK+ R
Sbjct: 166 SV--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  AR +L+ +      PN +TY T++    +     L  +++  M + G   D   + +
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I+ F +  ++ +A + +  M       ++V+YN LI+  C  G+   A  LL EM+ +G
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D  T+  LI   C+   I+ A      M + G   +  +Y  +   L K  + D A 
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAF 403

Query: 378 ----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
               N+F++  + + FT++S++  LC ++RL  A  LL    + G     S  + +V GL
Sbjct: 404 ALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGL 463

Query: 434 RHSGCRREAKKI 445
             +G   +AK++
Sbjct: 464 CKAGRVDDAKEV 475



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 164/315 (52%), Gaps = 5/315 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ R+E+A  ++   ++  V P++VTYN LI  YC+       + ++ RM ++G  PD
Sbjct: 218 LCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPD 277

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+NSLI+G  + S +  + ++L  M +    P++ +YN L+  L   G+ +EA  +  
Sbjct: 278 VVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLS 337

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T+N ++   C+N   + A ++   + + G +P+ ++Y  L   L K+ 
Sbjct: 338 EMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSE 397

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           R   A  +L  + D+G  PN  T+ ++M+  CC  +R+      +L+ M+R G       
Sbjct: 398 RFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCC--SRRLDEARHLLAVMRRVGCDPAAST 455

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE-M 313
           Y  ++    K GR+ +A + +  MV++G+Q  + S  T+++   +EGK + A    D+ +
Sbjct: 456 YEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVV 515

Query: 314 EKQGFECDKYTHTIL 328
             +   CD     +L
Sbjct: 516 AAESKACDPSYQKLL 530



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 7/197 (3%)

Query: 258 VIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++   VK  R  +A   + ++++      + ++YNTLI  +CK G +E A+ LL EM+++
Sbjct: 75  LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  TH+ ++  LC  GN+  A  +     +   DS L  +N +V  L K  ++  A
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVL--FNILVHGLCKANQLSEA 192

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             + E M     V D  TY+S++  LCK+ R+  A +LL + +K  VR        ++ G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252

Query: 433 LRHSGCRREAKKIQSKI 449
              +GC   A ++  ++
Sbjct: 253 YCKTGCTGLAHQLIERM 269


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 210/441 (47%), Gaps = 4/441 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA  ++ A+ I+ D +  G +PD  TY+ LI+  C     +    +     E
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G    ++ YN+L+ G ++  L+  +L L+ +M+E G  PD+W+YN +++ L ++G   +
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +  D I     P   TFN +++G CK R  D A+ +   +  HG  P+++TYN L+ 
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA +L       K + + G  PN ITY  +++   ++RK    +E+   MK +G T 
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           D    CT+I      G L +A +    +  +         +N +IN +C +  +  A  L
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKL 624

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M       D YT+ ++ID  CK GNI  A   L      G   +      +++ L  
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCV 684

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             ++  A+ +   M V++      +       K+  +A K+++  L     I   + + +
Sbjct: 685 THRLSEAVVIINLM-VQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELL 743

Query: 430 VDGLRHSGCRREAKKIQSKIR 450
            DG+R+   + + KK + K+R
Sbjct: 744 YDGIRNR--KLDNKKFKRKVR 762



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 4/387 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G+ PDV T+ + + ++C      A   +LN M   G   + V+Y ++I+G  + +    
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  L DEML+ GI PD+ ++N L+H L + G   E+ ++F  ++   + P   TFNI + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+    D A R+   +   G  P++++YN LI G CK  +L  A   L ++ +SG  P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TY TI+    +    +   +IL     KG+  D F Y ++I      G +  A    
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            + +  G +  I+ YNTL+    K+G +  A  L+ +M + G   D +T+ ++++GLCK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G +  A   L      G   ++  +N ++D   K   +D AI + ++M       D  TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++++ LCKA++L +      + L+ G
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKG 526



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 198/405 (48%), Gaps = 4/405 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K N   +A  +  + ++ G+ PD++T+N LI   C+  +      + +++ + G+ P+
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + T+N  I G  R   +  +  LL+ ++  G+ PDV SYN+L+    +  K  EA     
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   + P   T+N ++NG CK     NA ++ R     GF+P+  TY+ LI GLC  G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +  E  + G   + I Y T++K   +       L+++  M   G + D + Y 
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            V+    K+G L +A   +   +  G   DI ++NTLI+ YCK+  ++ A  +LD M   
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  L++GLCKA  +       + M + G   N+  YN +++   KD K+  A
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           + +F+ M+ +    D  T  +++  LC    L  A +L ++  K 
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 197/415 (47%), Gaps = 5/415 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C+   +++A  ++   +  G+ PDV++YN LI  +C+          L++M 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G+ P+  TYN++I G  +  ++  +  +L + +  G  PD ++Y+SL++ L   G  +
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  VF + +          +N ++ GL K      AL++ + + +HG  P++ TYN+++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G L  A  IL +    G  P+  T+ T++    + R     +EIL  M   G T
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T++    K  +L    D  + M+  G   +I++YN LI  +CK+ K+  A  L
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             EM+ +G   D  T   LI GLC  G + K   L +    +  F  +   +N +++   
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               +  A  +F  M       D++TY  M+ + CK   +  A   LL  +  G+
Sbjct: 614 XKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 189/430 (43%), Gaps = 49/430 (11%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           A   +  ++ +++G+ +G++ D          Y +         +  RM      P V +
Sbjct: 64  AEMRKNVDSKMLEGVYIGIMRD----------YGRKGKVQEAVNVFERMDFYDCEPSVQS 113

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN+++         S +  +   M ++GI PDV+++   M      G+P  A R+  +M 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
                    ++  +++G  K      A  +F  + K G  P+++T+N LI  LCK G ++
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            +  +  ++   G  PN  T+   ++                            G C   
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQ----------------------------GLC--- 262

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               + G + EA   +E +V++G+  D++SYNTLI  +CK  KL  A   L +M   G E
Sbjct: 263 ----RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +++T+  +I+G CKAG ++ A   L      GF  +   Y+ +++ L  DG ++ A+ V
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 380 F-ESME--VKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F E+ME   K S   Y+++V  L K   +  A +L+   ++ G          VV+GL  
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 436 SGCRREAKKI 445
            GC  +A  I
Sbjct: 439 MGCLSDANGI 448



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 151/329 (45%), Gaps = 10/329 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  L N  V    K   + +A  ++ D +  G  PD+ TYN++++  C+         
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ILN     G  PD+ T+N+LI G  +   +  ++++LD ML  GI PDV +YN+L++ L 
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  K D     F+ M+    TP   T+NI++   CK+R    A+ +F+ ++  G  P++V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILSA 242
           T   LI GLC  G L  A  +   +        +     IM   F  +    +  ++   
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M       D + Y  +I ++ K G +  A  ++ + ++ G+     +   ++N  C   +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 303 LEAAYLLLDEMEKQG---------FECDK 322
           L  A ++++ M + G         FE DK
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVNSIFEADK 716


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 230/459 (50%), Gaps = 21/459 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  V  FC+A  +++AE ++ D +R G L P++VT+N +++  C+    +    + + M 
Sbjct: 196 NTLVAAFCRAGEVDRAERLV-DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++PD V+YN+L+ G  +      +L +  EM   GI PDV ++ SL+H + + G  +
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + ++M    L     TF  +++G CK  + D+AL   R +++    P +V YN LI
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C  GR+  AR +++E+   G  P+ +TY+TI+    +N       ++   M   G  
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL 434

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I    +  RL +A    + M++ G+Q D V+Y +LI+ +CKEG +E A  L
Sbjct: 435 PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSL 494

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR------LHLEYMN-KIGFD-------- 354
            DEM K G   D  T+++LI+GL K+   K A+       H E +   I +D        
Sbjct: 495 HDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRN 554

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           + L++   ++      G ++ A  V++S+  +    D   YS ++H  C+   +  A   
Sbjct: 555 AELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSF 614

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               L+ G     ++  +++ GL   G   EA ++  ++
Sbjct: 615 HKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P V+ YN ++ A     S  +     + M   G++P+V TYN L+           +
Sbjct: 118 GYAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +L +M   G  P+  +YN+L+    + G+ D A R+   M  G L P   TFN ++NG
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK    ++A ++F  + K G  P+ V+YN L+ G CK G    A  +  E+   G  P+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+T+++    +    +  + ++  M+ +G   +   +  +I  F K G L +A   + 
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M    +Q  +V YN LIN YC  G+++ A  L+ EME +G + D  T++ ++   CK G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
           +   A    + M + G   +   Y+ ++  L ++ ++  A  +F++M       D  TY+
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           S++   CK   +  A  L    +K+GV         +++GL  S   +EA+++  K+
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 180/367 (49%), Gaps = 20/367 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   L+ A   + +  +  + P VV YN LI+ YC     D    ++  M   G+ PD
Sbjct: 342 FCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+++++   +N     +  L  +MLE G+ PD  +Y+SL+  L +  +  +A+ +F+
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   L P   T+  +++G CK    + AL +   + K G +P++VTY++LI GL K+ 
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R + A+ +L +L      P  I Y  +M+CC RN + K  L +L     KG+   G    
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIKYDALMRCC-RNAELKSVLALL-----KGFCMKGL--- 572

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                      + EA    + ++     LD   Y+ LI+ +C+EG +  A     +M + 
Sbjct: 573 -----------MNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC 621

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF  +  +   LI GL + G +  A   ++ +      ++ EA   ++D   K+G +D  
Sbjct: 622 GFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAV 681

Query: 377 INVFESM 383
           ++V   M
Sbjct: 682 LDVLHGM 688



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 40/282 (14%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G+ P ++ YN ++  L  A  L +AR     +   G APN  TY  +++           
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVR----------- 165

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
                                   A    G  KEA   +  M   G   + V+YNTL+  
Sbjct: 166 ------------------------ALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAA 201

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +C+ G+++ A  L+D M + G + +  T   +++G+CKAG ++ AR   + M K G   +
Sbjct: 202 FCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPD 261

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
             +YN +V    K G    A++VF  M  K    D  T++S++H +CKA  L  A  L+ 
Sbjct: 262 GVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVR 321

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              + G+++ +    A++DG    G   +A     ++R  +I
Sbjct: 322 EMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 204/420 (48%), Gaps = 39/420 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS    N  + +  K  R+   E++  + IR  +  +VVT++++I+  C+   F     
Sbjct: 191 RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGD 250

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++  M+  G SP V+TYN++I G  +   +  +  LL EM+   I P+  ++N L+    
Sbjct: 251 VVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +      A +VF++M    L P   T+N ++NGLC N   D AL +   +   G  P +V
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI G CK   L+ AR +L ++G  G APN IT+ T+                    
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL-------------------- 410

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                          I A+ K GR+ +A      M+  GV  ++ +YN LI  +C+EG +
Sbjct: 411 ---------------IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L  EME  G + D  T+ IL+D LCK G  + A   L+ M ++G + +   YN +
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNAL 515

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   ++G    A+NV   ME K    +  TY+ ++   C   +L  A++LL   L+ G+
Sbjct: 516 IDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575



 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 178/365 (48%), Gaps = 2/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +   CK  + +KA  ++ D    G  P V+TYN +ID YC+         +L  M 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              I P+ +T+N LI G  R+  ++ +  + +EM   G+ P+V +YNSL++ L   GK D
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 130 EANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA    QD + G  L P   T+N ++NG CK +    A  M   + K G  P ++T+N L
Sbjct: 352 EA-LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I    KAGR+  A  +   + D+G  PN  TY  ++    R    K   ++   M+  G 
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  ++ A  K G  ++A   +++M   G+    ++YN LI+ Y +EG   AA  
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALN 530

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +   MEK+G   +  T+ +LI G C  G ++ A   L  M + G   N   Y+ + D + 
Sbjct: 531 VRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMM 590

Query: 369 KDGKI 373
           + G I
Sbjct: 591 EKGFI 595



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 173/335 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA ++ KA+A++ + +   + P+ +T+N+LID +C+  +  A   +   M+ 
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTYNSLI G   N  L  +L L D+M  MG+ P+V +YN+L++   +     E
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  D+    L P   TFN +++   K    D+A  +   +   G  P + TYN LI 
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+ G ++ AR + KE+  +G   + +TY  ++    +  + +  + +L  M   G   
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I  + + G    A +    M   G + +IV+YN LI  +C +GKLE A  LL
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 567

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           +EM ++G   ++ T+ IL D + + G I     HL
Sbjct: 568 NEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 197/421 (46%), Gaps = 10/421 (2%)

Query: 36  LGVLPDVVTYN---MLIDAYCQFVSFDAGYTILNRMREAGIS--PDVVTYNSLIAGATRN 90
           L +L +   YN    L+D++ +   + +  TI + +   G     + +  + L+    +N
Sbjct: 114 LHLLANAKNYNKIRALLDSFAKNAHY-SNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKN 172

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  +L+  D   + G      S N ++  L + G+      V+++MI   +     TF
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           ++++NGLCK      A  +   ++  GF P ++TYN +I G CKAG++  A  +LKE+  
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
               PN IT+  ++    R+       ++   M+R+G   +   Y ++I      G+L E
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A    ++M   G++ ++V+YN LIN +CK+  L+ A  +LD++ K+G   +  T   LID
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
              KAG +  A L    M   G   N+  YNC++    ++G +  A  + + ME      
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  TY+ +V  LCK      A +LL    + G+        A++DG    G    A  ++
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532

Query: 447 S 447
           +
Sbjct: 533 T 533



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 52/359 (14%)

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMIC------GDLTPCTATF---------------N 151
           +S +++ H L  LG    AN +  DM+       G++      F               N
Sbjct: 139 YSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCN 198

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            ML  L K         +++ + +      +VT++++I GLCK G+ + A  +++++   
Sbjct: 199 PMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW 258

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G +P+ ITY TI+    +  K      +L  M  K    +   +  +I  F +   +  A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
               E+M   G+Q ++V+YN+LIN  C  GKL+ A  L D+M   G + +  T+  LI+G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTY 391
            CK   +K AR  L+ + K G   N+  +N ++D  GK G++D            D+F  
Sbjct: 379 FCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD------------DAFLL 426

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            SM+                   L +GV    S    ++ G    G  +EA+K+  ++ 
Sbjct: 427 RSMM-------------------LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEME 466


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 209/447 (46%), Gaps = 39/447 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTY++LI   C+    +  + +   M E G  P   TY  LI       +   ++ +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM      P+V +Y  L+  L + GK +EAN VF+ M+   L P   TFN ++NG CK
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 359

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             +  +A ++   ++K    P + TYN L++GLC+  +   A  +L+ + D+G  P+ +T
Sbjct: 360 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 419

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    +  +  +   I ++M   G   DGF +  +I    K+GRL++A   +  MV
Sbjct: 420 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 479

Query: 280 TDGVQLDIVSYNTLINLYCKEG-----------------------------------KLE 304
             G+ LD V++  LI+ +CK G                                   KL 
Sbjct: 480 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L +M K G      THTILI+G C+AG    +   LE M + G   N+  Y  I+
Sbjct: 540 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 599

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L  +G+++ A  +  SM       + FTY+ +V    KA RL  A +++ + +K+G +
Sbjct: 600 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQS 447
                  A++ G   S     A+ + S
Sbjct: 660 PNSHIYSALLSGFVLSNTAIGARALSS 686



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 7/438 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAG 72
           V   CK   ++ AE      +RLG   D      L+ A C+       + +  +M +E  
Sbjct: 178 VNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEEN 237

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
             P+ VTY+ LI G      L  +  L  EM+E G  P   +Y  L+     +G  D+A 
Sbjct: 238 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 297

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++  +M      P   T+ I+++ LC+    + A  +FR + KHG  P ++T+N LI G 
Sbjct: 298 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 357

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFD 251
           CK G + +A  +L  +      PN  TY  +M+  C  ++ YK  L +L  +   G   D
Sbjct: 358 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPD 416

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F K G+L  A +    M + G++ D  ++  LI+  CK G+LE A  +L 
Sbjct: 417 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 476

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M K+G   D+ T T LIDG CK G  K      E M +    +    +NC +D LGKD 
Sbjct: 477 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 536

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K++ A  +   M     V    T++ ++   C+A     + K+L    ++G         
Sbjct: 537 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 596

Query: 428 AVVDGLRHSGCRREAKKI 445
            +++GL ++G   EA+ I
Sbjct: 597 IIINGLCNNGRVEEAETI 614



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 10/453 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  +   C+ ++  KA  ++   +  G+LPD VTYN+L+D +C+    +  + 
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           I N M  AG+ PD  T+ +LI G  +   L  +  +L  M++ GI  D  ++ +L+  HC
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 498

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             ++GK  +   +F++M+         TFN  L+ L K+   + A  M   + K+G VP 
Sbjct: 499 --KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VT+ ILI+G C+AG    +  +L+ +  +G +PN  TYT I+     N + +    IL 
Sbjct: 557 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 616

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           +M   G + + F Y  ++ A VK GRL  A   +  MV +G Q +   Y+ L++ +    
Sbjct: 617 SMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 676

Query: 302 KLEAAYLL--LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
               A  L    +++ +    ++  +  L   + +  ++  A    + + K G  +  + 
Sbjct: 677 TAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DL 735

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSF---TYSSMVHNLCKAKRLPSASKLLLSCLK 416
           YN +V  L K+G+I  A  + + M     F     SS++ + CK  +  +  + +   L 
Sbjct: 736 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLD 795

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +      ++   V+ GLR+ G  +EA+K+ S +
Sbjct: 796 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 828



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD M E+G       Y++L+ CL +L     A  V++ M+          +  ++N LCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 160 NRYTDNA-------LRMFRGLQKH-----------------------------GFVPELV 183
           N +   A       LR+  GL  H                                P  V
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ILI GLC+AGRL  A  + +E+ + G  P+  TYT ++K           +++L  M
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K    +   Y  +I    + G+++EA     +M+  G+   I+++N LIN YCKEG +
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            +A+ LL  MEK   + +  T+  L++GLC+      A L L  +   G   +   YN +
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           VD   K+G+++ A N+F SM       D FT+++++  LCK  RL  A+ +L S +K G+
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483

Query: 420 RILKSAQKAVVDG 432
            + +    A++DG
Sbjct: 484 SLDEVTFTALIDG 496



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 201/443 (45%), Gaps = 40/443 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  ++E+A  +    ++ G+ P ++T+N LI+ YC+     + + +L+ M +    P+
Sbjct: 322 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 381

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN L+ G  R S    +  LL  +++ G+ PD  +YN L+    + G+ + A  +F 
Sbjct: 382 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 441

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   TF  +++GLCK    + A  +   + K G   + VT+  LI G CK G
Sbjct: 442 SMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 501

Query: 197 -----------------------------------RLRTARWILKELGDSGHAPNAITYT 221
                                              +L  A  +L ++   G  P+ +T+T
Sbjct: 502 KAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHT 561

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +++   R  +  L L++L  MK+ G + + + Y  +I      GR++EA   +  M + 
Sbjct: 562 ILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF 621

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV  +  +Y  L+  + K G+L+ A+ ++  M K G + + + ++ L+ G   +    GA
Sbjct: 622 GVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 681

Query: 342 RLHLEY--MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVH 396
           R       ++     S     NC+   + +   +DHA+ + + ++   V     Y+ +V 
Sbjct: 682 RALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVV 741

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            LCK  R+  A +L    +K G+
Sbjct: 742 GLCKEGRIIEADQLTQDMVKHGL 764


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 206/411 (50%), Gaps = 6/411 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T  LNI + +FC  NRL  A +++ D ++LG  P   T+  LI   C          + 
Sbjct: 88  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M   G  PDV+TY +LI G  +    S ++  L  M +    P V  Y++++  L + 
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  EA  +F DM+   ++P   T++ +++GLC   +   A+R+F  +     +P+ +T+
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK 244
           N L+  LCK G +  A +++  +  S   P+ +TY ++M   C R+   K  + +   M 
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGK-TVNVFDTMV 326

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           RKG       Y T+I  + KI  + +A    E+M   G+  D V+YNTLI+  C  G+L 
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L  EM   G   D  T+ IL D LCK   +  A + L+ +     D ++  Y+ ++
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           D + + G+++ A ++F  +  K    D  TY+ M++ LC+   L  ASKL 
Sbjct: 447 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 497



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 4/359 (1%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           + D   ++ NRM      P +V ++ L+   TR    S  L L  +M   GIP + ++ N
Sbjct: 34  TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            L++    L +   A  V  D++     P TATF  ++ GLC       AL++F  +   
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           GF P+++TY  LI GLCK G   TA   L+ +      P  + Y+TI+    ++R+    
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L + S M  KG + + F Y ++I     +G  KEA      M+   +  D +++NTL++ 
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CKEG +  A+ ++D M +   + D  T+  L+DG C    +       + M + G   +
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           + +Y  +++   K   +D A+ +FE M     + D+ TY++++H LC   RL  A  L 
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 181/366 (49%), Gaps = 9/366 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  +L +A ++  D +  G+ P+  TY+ LI   C    +     +   M    I P
Sbjct: 203 SLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMP 262

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCL-FQLGKPDEAN 132
           D +T+N+L+    +  ++  +  ++D M++  + PDV +YNSLM  HCL  ++GK     
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGK---TV 319

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            VF  M+     P   ++  ++NG CK +  D A+ +F  + + G +P+ VTYN LI GL
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C  GRLR A  +  E+   G  P+ +TY  +     +N +    + +L  ++      D 
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  V+    + G L+ A D   ++ + G+  D+ +Y  +IN  C++G L  A  L  E
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499

Query: 313 MEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M++ G   +  T+ ++  G  +    ++  +L  E +++ GF  ++     +V+ L  DG
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR-GFSIDVSTTTLLVEMLSDDG 558

Query: 372 KIDHAI 377
            +D ++
Sbjct: 559 -LDQSV 563



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 203/434 (46%), Gaps = 4/434 (0%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            N ++ A ++    +R+   P +V ++ L+ +  +   +    ++  +M   GI  +  T
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
            N LI      + L  +  +L ++L++G  P   ++ +L+  L   GK  EA ++F  M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
                P   T+  ++NGLCK   T  A+R  R +++    P +V Y+ +I  LCK  +L 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  +  ++   G +PN  TY++++        +K  + +  AM  +    D   + T++
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
            A  K G + +A   ++ M+   ++ D+V+YN+L++ +C   ++     + D M ++G  
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
               ++T LI+G CK   +  A    E M++ G   +   YN ++  L   G++  AI +
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 380 FESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F  M    ++ D  TY  +   LCK  RL  A  LL     + +         V+DG+  
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451

Query: 436 SGCRREAKKIQSKI 449
           +G    A+ + SK+
Sbjct: 452 AGELEAARDLFSKL 465



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 35/327 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   CK   + KA  ++   I+  + PDVVTYN L+D +C          + + M 
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P V++Y +LI G  +  ++  ++ L +EM + G+ PD  +YN+L+H L  +G+  
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F +M+     P   T+ I+ + LCKN     A+ + + ++     P++  Y+I++
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+C+AG L  AR +  +L   G  P+  TYT ++                         
Sbjct: 447 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN------------------------ 482

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               G C       + G L EA+    +M  +G   +  +YN +   + +  +   A  L
Sbjct: 483 ----GLC-------QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAG 336
             EM  +GF  D  T T+L++ L   G
Sbjct: 532 FQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 4/175 (2%)

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
           + +  + +A     +M+       IV ++ L+    +         L  +M+  G   + 
Sbjct: 30  LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           YT  ILI+  C    +  A   L  + K+G+  +   +  ++  L  +GKI  A+ +F+ 
Sbjct: 90  YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           M       D  TY ++++ LCK     +A + L S  +   R        ++D L
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSL 204


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 207/453 (45%), Gaps = 40/453 (8%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDV 77
           A R +   A+  D ++LGV P + TYN L+D++C+    D    +L  M  R AG  P+ 
Sbjct: 207 AARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPND 266

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEM-------------------------------LEM 106
           VTYN +I G  R   L  +  L+D M                               LEM
Sbjct: 267 VTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEM 326

Query: 107 ---GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI P V +YN+L+  LF+ G  + A   F +M    L P   T+N ++NG CK    
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNL 386

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  L++ G  P ++TYNILI G C+ G L  AR + +E+ +    P+  TYT +
Sbjct: 387 KQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTIL 446

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           M      R   +       M  KG   D F Y T I+A + IG +  A    E+M+  G+
Sbjct: 447 MNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGI 506

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V+YN LI+  CK G L+ AY+L  +M   G   D  T+T LI   C+ G +  A+ 
Sbjct: 507 SSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKN 566

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
             + M   G   ++  Y   +    + G +  A   F  M  +    +  TY+ ++H LC
Sbjct: 567 IFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALC 626

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  R  SA +     L+ G+   K     ++DG
Sbjct: 627 RMGRTESAYQHFHEMLERGLVPNKYTYTLLIDG 659



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 179/383 (46%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +      + +EKA A++++    G++P VVTYN LID   +  + +A   
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             + MR  G+ PD++TYNSLI G  +   L  +L L  ++   G+ P V +YN L+    
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG  + A R+ ++M   D  P   T+ I++NG C  R        F  +   G  P+  
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN  I      G +  A  + +E+   G + + +TY  ++    +    K    +   M
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   D   Y  +I A  + GRL EA +  + MV  G+   +V+Y   I+ YC+ G L
Sbjct: 537 VTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNL 596

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             AY    +M ++G E ++ T+ +L+  LC+ G  + A  H   M + G   N   Y  +
Sbjct: 597 YLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLL 656

Query: 364 VDRLGKDGKIDHAINVFESMEVK 386
           +D   K+G   HAI ++  M  K
Sbjct: 657 IDGSCKEGNWVHAIRLYCEMHQK 679



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 38/374 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA  L++A  +  D  R G+ P V+TYN+LID YC+    +    +   M E
Sbjct: 374 NSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTE 433

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PDV TY  L+ G+     L+      DEML  G+ PD ++YN+ +     +G    
Sbjct: 434 EDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITN 493

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M+   ++  T T+N++++GLCK     +A  ++  +   G   + VTY  LI 
Sbjct: 494 AFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIH 553

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ GRL  A+ I   +  SG +P+ +TYT                             
Sbjct: 554 AHCERGRLIEAKNIFDGMVASGLSPSVVTYTIF--------------------------- 586

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                   I  + + G L  A  +  +M+ +GV+ + V+YN L++  C+ G+ E+AY   
Sbjct: 587 --------IHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHF 638

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            EM ++G   +KYT+T+LIDG CK GN +   RL+ E M++ G   +   +N +    G 
Sbjct: 639 HEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCE-MHQKGIHPDHCTHNALFKGFG- 696

Query: 370 DGKIDHAINVFESM 383
           +G +  A+   E++
Sbjct: 697 EGHMYDAVQYLENV 710



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 174/406 (42%), Gaps = 51/406 (12%)

Query: 87  ATRNSLLSCS---LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           A ++   SCS   L    EM   G+ P V   N ++  L    + D+   V+ DM+   +
Sbjct: 166 AQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGV 225

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--GFVPELVTYNILIKGLCKAGRLRTA 201
            P   T+N +L+  CK    D A+ + + ++    G +P  VTYN++I GL + G L  A
Sbjct: 226 EPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKA 285

Query: 202 RW----------------------------------ILKELGDSGHAPNAITYTTIMKCC 227
                                               +L E+ + G  P  +TY T++   
Sbjct: 286 AQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGL 345

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
           F+    +        M+ KG   D   Y ++I  + K G LK+A      +   G+   +
Sbjct: 346 FKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTV 405

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           ++YN LI+ YC+ G LE A  L +EM ++    D  T+TIL++G C   N+   R+  + 
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
           M   G + +  AYN  +      G I +A  + E M ++    D+ TY+ ++  LCK   
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR----EAKKI 445
           L  A  L +  +  G+R+           L H+ C R    EAK I
Sbjct: 526 LKDAYVLWMKMVTDGLRL----DCVTYTCLIHAHCERGRLIEAKNI 567


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 214/422 (50%), Gaps = 7/422 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK N+  KA  ++   +  G++PD  +Y  L++  C+  +      ++ +M   G   +
Sbjct: 109 LCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTN 168

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+L+ G   +  L+ SL LLD + + G+ P+ ++Y+ L+   ++    DEA ++  
Sbjct: 169 TVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLD 228

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D+I     P   ++N++L GLCK   T+ A+++F+ L   GF P +V++NIL++ LC  G
Sbjct: 229 DIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEG 288

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L E+      P+ +TY  ++     N + +   ++L  M R G+      Y 
Sbjct: 289 RWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYN 348

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EK 315
            +IA   K G++      ++QM+      +  +Y+  I++  ++GK++ A+ ++  +  K
Sbjct: 349 PIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSK 407

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           Q F    + +  LI  LC+ GN   A   L  M K GF  +   Y+ ++  + ++G +D 
Sbjct: 408 QNFPMHDF-YKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDE 466

Query: 376 AINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+ +F  +E  D       Y++++   CKA+R   + ++ L  +  G    ++    +V+
Sbjct: 467 ALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVE 526

Query: 432 GL 433
           GL
Sbjct: 527 GL 528



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 6/333 (1%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM------GIPP 110
           S + G++ ++   +  ISP    +N       RN      L + D  L +      G  P
Sbjct: 38  SLNKGFSRVSASTQIAISPKDTIFNLPNWRVGRNDQKGKELRIYDAFLHLEYLVGKGQKP 97

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
           +V     L++ L +  K  +A RV + M+   + P  A++  ++N LCK      A+++ 
Sbjct: 98  EVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLV 157

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
             ++ HGF    VTYN L+KGLC  G L  +  +L  L   G  PNA TY+ +++  ++ 
Sbjct: 158 EKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKE 217

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
           R     +++L  +  KG   +   Y  ++    K GR +EA    +++   G    +VS+
Sbjct: 218 RGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSF 277

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N L+   C EG+ E A  LL EM+K+       T+ ILI  L   G  + A   L+ M +
Sbjct: 278 NILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTR 337

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            GF ++  +YN I+ RL K+GK+D  +   + M
Sbjct: 338 SGFKASATSYNPIIARLCKEGKVDLVLKCLDQM 370



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 4/395 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++  ++    + G++P+  TY+ L++A  +    D    +L
Sbjct: 168 NTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLL 227

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++ L  E+   G  P V S+N L+  L   
Sbjct: 228 DDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYE 287

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EAN +  +M   D  P   T+NI++  L  N  T+ A ++   + + GF     +Y
Sbjct: 288 GRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSY 347

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LCK G++      L ++      PN  TY+ I     + +  +    I S   +
Sbjct: 348 NPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSK 407

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           + +    F Y  +IA+  + G    A   + +M   G   D  +Y++LI   C+EG L+ 
Sbjct: 408 QNFPMHDF-YKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDE 466

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIV 364
           A  +   +E+     D   +  LI G CKA        + L  +NK G   N   Y  +V
Sbjct: 467 ALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNK-GCVPNENTYTILV 525

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 399
           + L  + + D A ++ + + +K   + S+ V  LC
Sbjct: 526 EGLAFEEETDIAADLMKELYLKKVLSQST-VERLC 559



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 4/222 (1%)

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  R+  A   L+ L   G  P     T ++    +  K +  + ++  M   G   D  
Sbjct: 76  KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAA 135

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++    K G +  A   +E+M   G   + V+YNTL+   C  G L  +  LLD +
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K+G   + +T++ L++   K   +  A   L+ +   G + NL +YN ++  L K+G+ 
Sbjct: 196 TKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRT 255

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           + AI +F+ + VK       +++ ++ +LC   R   A++LL
Sbjct: 256 EEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELL 297



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 4/193 (2%)

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           R+ +A  ++E +V  G + ++     L+   CK  K   A  +++ M   G   D  ++T
Sbjct: 79  RIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYT 138

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            L++ LCK GN+  A   +E M   GF +N   YN +V  L   G ++ ++ + + +   
Sbjct: 139 HLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKK 198

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             + ++FTYS ++    K + +  A KLL   +  G      +   ++ GL   G   EA
Sbjct: 199 GLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEA 258

Query: 443 KKIQSKIRMAKIS 455
            K+  ++ +   S
Sbjct: 259 IKLFQELPVKGFS 271



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 14/155 (9%)

Query: 279 VTDGVQLDIVSYNTLINL----------YCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           V+   Q+ I   +T+ NL            KE ++  A+L L+ +  +G + +    T L
Sbjct: 46  VSASTQIAISPKDTIFNLPNWRVGRNDQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQL 105

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           +  LCK    + A   +E M   G   +  +Y  +V+ L K G + +AI + E ME    
Sbjct: 106 LYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGF 165

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             ++ TY+++V  LC    L  + +LL    K G+
Sbjct: 166 PTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGL 200


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 221/440 (50%), Gaps = 4/440 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI V ++CK    + A+ +I +  +  V PDVVT+N+LIDA  +    DA   +++ M 
Sbjct: 160 LNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P +VTYNS++ G  ++     + ++   M +  + PDV S+N L+    ++G+  
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVK 279

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA + +++M    +TP   +F+ ++    +    D+A    R ++  G VP+ V Y ++I
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+AG +  A  +  E+   G  P+ +TY T++    +  +     ++L+ M+ +G T
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   + T+I  + + G  + A    + ++   ++ D+V+YN+LI+  C++G L  A  L
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D+M  +    +  T++ILID  C+ G ++ A   L+ M K G   N+  YN I+    +
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 370 DGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +       + M   + F    T+++++H   K + +  A  +     K  VR     
Sbjct: 520 SGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVT 579

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              +++G    G  ++A ++
Sbjct: 580 YNMIINGFSEQGNMQDAGRV 599



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 191/380 (50%), Gaps = 8/380 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +  FC+   +++A     +     V PDVV+++ LI  + +    D     L  
Sbjct: 263 RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE 322

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G+ PD V Y  +I G  R   +S +L + DEM+  G  PDV +YN+L++ L +  +
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A ++  +M    +TP   TF  +++G C+    +NAL++F  L +    P++VTYN 
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHA----PNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           LI G+C+ G L  A     EL D  HA    PN ITY+ ++       + +     L  M
Sbjct: 443 LIDGMCRKGDLAKA----NELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEM 498

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            +KG   +   Y ++I  + + G +K+   ++++M  D V  D++++NTLI+ Y KE  +
Sbjct: 499 VKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENM 558

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A+ + + MEK+    D  T+ ++I+G  + GN++ A    + M   G + +   Y  +
Sbjct: 559 HGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSL 618

Query: 364 VDRLGKDGKIDHAINVFESM 383
           ++     G    A  + + M
Sbjct: 619 INGHVTAGNSKQAFQLHDEM 638



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 184/372 (49%), Gaps = 4/372 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T N+++ +YC+ + FD   T+++ M +  + PDVVT+N LI    R   +  ++ L+D M
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G+ P + +YNS++  L +  + D+A  VF+ M    + P   +FNI++ G C+    
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A++ ++ +Q     P++V+++ LI    + G +  A   L+E+   G  P+ + YT +
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    R       L +   M   G   D   Y T++    K  RL +A   + +M   GV
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+ ++ TLI+ YC++G  E A  L D + +Q    D  T+  LIDG+C+ G++  A  
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLC 399
             + M+      N   Y+ ++D   + G+++ A    + M  K +     TY+S++   C
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518

Query: 400 KAKRLPSASKLL 411
           ++  +    + L
Sbjct: 519 RSGNVKKGQQFL 530



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 177/338 (52%), Gaps = 2/338 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   ++ A A + +   LG++PD V Y M+I  +C+  S      + + M   G  PD
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G  +   L  +  LL+EM E G+ PD+ ++ +L+H   + G  + A ++F 
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            ++   L P   T+N +++G+C+      A  ++  +     +P  +TY+ILI   C+ G
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A   L E+   G+ PN  TY +I+K   R+   K G + L  M++     D   + 
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  ++K   +  A +    M  + V+ D V+YN +IN + ++G ++ A  +   M   
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS 606

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
           G E D+YT+  LI+G   AGN K A +LH E +++ GF
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR-GF 643



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  + +  FC+A  + +A  +  + +  G LPDVVTYN L++  C+         +LN M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G++PD+ T+ +LI G  R      +L L D +L   + PDV +YNSL+  + + G  
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +AN ++ DM   ++ P   T++I+++  C+    ++A      + K G +P + TYN +
Sbjct: 454 AKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           IKG C++G ++  +  L+++      P+ IT+ T++    +         + + M+++  
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  F + G +++A    + M   G++ D  +Y +LIN +   G  + A+ 
Sbjct: 574 RPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQ 633

Query: 309 LLDEMEKQGFECD 321
           L DEM  +GF  D
Sbjct: 634 LHDEMIHRGFAPD 646



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 191/395 (48%), Gaps = 4/395 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I++ +  +  +P    ++ LI   T++     + +    +L+  +P    + N+L+  L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G P  A   ++ ++  D      T NIM++  CK    D A  +   ++K    P++V
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+LI    +AG +  A  ++  + + G  P  +TY +++K   ++R++    E+   M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            +     D   +  +I  F ++G +KEA  + ++M    V  D+VS++ LI L+ + G++
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A   L EM+  G   D   +T++I G C+AG++  A    + M   G   ++  YN +
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K  ++  A  +   ME +    D  T+++++H  C+     +A +L  + L+  +
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           R       +++DG+   G   +A ++   +   +I
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREI 468



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N  +  +C++  ++K +  +    +  V PD++T+N LI  Y +  +    + + N 
Sbjct: 508 RTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNI 567

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + PD VTYN +I G +    +  +  +   M + GI PD ++Y SL++     G 
Sbjct: 568 MEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGN 627

Query: 128 PDEANRVFQDMICGDLTP 145
             +A ++  +MI     P
Sbjct: 628 SKQAFQLHDEMIHRGFAP 645


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 197/417 (47%), Gaps = 3/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+L D VTYN LID  C    +     +L +M    + PD  T+N LI    +   +  +
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +L  M + G  PD+ +YN+LM          EA  +F  M+   L P    +N++++G
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK +  D A+ +F+ L     VP + +YN LI GLC +GR+   + +L E+  S   P+
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  ++    +  +    L +L  M +KG   +   Y  ++  +     +  A D   
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G++ DI++YN LIN YCK   ++ A +L  EM  +    D  ++  LIDGLC  G
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSS 393
            I   +  L+ M   G   ++  YN ++D   K    D AI++F  +      D +T  +
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHA 584

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +V NLCK ++L  A   L   L  G          +++ L   G   EA  + SK+ 
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 200/424 (47%), Gaps = 6/424 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK  R+ +A+ ++    + G  PD+VTYN L++ YC   +      + NRM 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PDV+ YN LI G  +  ++  ++ L  E+    + P + SYNSL+  L   G+  
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
              ++  +M      P   T+NI+++ LCK      AL +   + K G  P +VTYN ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A+ I   +  SG  P+ + Y  ++    +       + +   M+ K   
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I     +GR+    + +++M   G   D+++YN L++ +CK    + A  L
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             ++  +G   D YT+  ++D LCK   +K A   L+++   G   N++ Y  +++ L K
Sbjct: 568 FRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-VRILKS 424
           DG    A+ +   ME      D+ T+  ++  L +      A KL    +  G V I KS
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKS 686

Query: 425 AQKA 428
             ++
Sbjct: 687 LNQS 690



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 194/413 (46%), Gaps = 4/413 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FC    + KA     + +  G L D  TY  LI+   +     A   +L  M 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++ + P++V Y++LI G  ++  +S +L L  ++ E GI  D  +YNSL+     +G+  
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  ++   M+  ++ P   TFNI+++ LCK      A  +   + K G  P++VTYN L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C    +  AR +   +   G  P+ + Y  ++    + +     + +   +  K   
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y ++I      GR+      +++M       D+V+YN LI+  CKEG++  A  +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M K+G + +  T+  ++DG C   N+  A+     M K G + ++  YN +++   K
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              +D AI +F+ M     + D  +Y+S++  LC   R+P   +LL     SG
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 182/419 (43%), Gaps = 39/419 (9%)

Query: 53  CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           C+F + D   T  NRM      P    ++ L+    R      ++ L  ++   GI P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-------------- 158
            ++  L++C F       A  +   ++     P   TFN ++NG C              
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 159 ---------------------KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
                                KN     AL + + ++K    P LV Y+ LI GLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +  ++G+ G   +A+TY +++  C    +++   ++L+ M R+    D + +  
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I A  K GR+ EA   +  M   G + DIV+YN L+  YC    +  A  L + M K+G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E D   + +LIDG CK   +  A +  + +        + +YN ++D L   G+I H  
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 378 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            + + M    +  D  TY+ ++  LCK  R+  A  +L+  +K GV+       A++DG
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 181/402 (45%), Gaps = 34/402 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  +CK   +++A  +  +     ++P + +YN LID  C          +L+ M  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +   PDVVTYN LI    +   +  +L +L  M++ G+ P++ +YN++M         + 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M+   L P    +N+++NG CK    D A+ +F+ ++    +P++ +YN LI 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GR+   + +L E+ DSG +P+ ITY  ++    + + +   + +   +  +G   
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWP 577

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D +    ++    K  +LK A D ++ ++  G   ++ +Y  LIN  CK+G    A LLL
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNK------------------- 350
            +ME      D  T  I+I  L +     K  +L  E + +                   
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPA 697

Query: 351 -IGFDSNLEAY------------NCIVDRLGKDGKIDHAINV 379
             GF S  E Y            NC  D + +  +I H   V
Sbjct: 698 SSGFQSVTEFYRVQASHAGSHRFNCTTDPISRSNQIHHRFTV 739



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 193/388 (49%), Gaps = 4/388 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + T+ +LI+ Y         +++L  + ++G  P++VT+N++I G   N ++  +
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           LD    +L  G   D ++Y +L++ L + G+   A  + Q+M    + P    ++ +++G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+ +  +AL +   + + G + + VTYN LI G C  GR +    +L ++      P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    +  +      +L+ M ++G   D   Y  ++  +     + EA +   
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G++ D+++YN LI+ YCK   ++ A +L  E+  +       ++  LIDGLC +G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I   +  L+ M+      ++  YN ++D L K+G+I  A+ V   M  K    +  TY+
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +M+   C    +  A  +    +KSG+ 
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLE 472



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 4/196 (2%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++ A V++G    A     Q+ + G+   I ++  LIN Y  +     A+ LL  + K G
Sbjct: 61  LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           ++ +  T   +I+G C  G I  A    + +   G+  +   Y  +++ L K+G+I  A+
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180

Query: 378 NVFESME---VKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           ++ + ME   V+ +   YS+++  LCK   +  A  L     + G+ +      +++DG 
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240

Query: 434 RHSGCRREAKKIQSKI 449
              G  +E  ++ +K+
Sbjct: 241 CSVGRWQEVTQLLTKM 256



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 4/164 (2%)

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           ++ L+    + G    A  L  +++ +G      T TILI+      +   A   L  + 
Sbjct: 58  FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATIL 117

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
           K G+  NL  +N I++    +G I  A++  +++  +    D FTY ++++ L K  ++ 
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +A  LL    KS V+       A++DGL   G   +A  + S+I
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 209/447 (46%), Gaps = 39/447 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTY++LI   C+    +  + +   M E G  P   TY  LI       +   ++ +
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM      P+V +Y  L+  L + GK +EAN VF+ M+   L P   TFN ++NG CK
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 382

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             +  +A ++   ++K    P + TYN L++GLC+  +   A  +L+ + D+G  P+ +T
Sbjct: 383 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 442

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    +  +  +   I ++M   G   DGF +  +I    K+GRL++A   +  MV
Sbjct: 443 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 502

Query: 280 TDGVQLDIVSYNTLINLYCKEG-----------------------------------KLE 304
             G+ LD V++  LI+ +CK G                                   KL 
Sbjct: 503 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 562

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L +M K G      THTILI+G C+AG    +   LE M + G   N+  Y  I+
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L  +G+++ A  +  SM       + FTY+ +V    KA RL  A +++ + +K+G +
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQS 447
                  A++ G   S     A+ + S
Sbjct: 683 PNSHIYSALLSGFVLSNTAIGARALSS 709



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 7/438 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAG 72
           V   CK   ++ AE      +RLG   D      L+ A C+       + +  +M +E  
Sbjct: 201 VNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEEN 260

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
             P+ VTY+ LI G      L  +  L  EM+E G  P   +Y  L+     +G  D+A 
Sbjct: 261 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 320

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++  +M      P   T+ I+++ LC+    + A  +FR + KHG  P ++T+N LI G 
Sbjct: 321 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 380

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFD 251
           CK G + +A  +L  +      PN  TY  +M+  C  ++ YK  L +L  +   G   D
Sbjct: 381 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPD 439

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F K G+L  A +    M + G++ D  ++  LI+  CK G+LE A  +L 
Sbjct: 440 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 499

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M K+G   D+ T T LIDG CK G  K      E M +    +    +NC +D LGKD 
Sbjct: 500 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 559

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K++ A  +   M     V    T++ ++   C+A     + K+L    ++G         
Sbjct: 560 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 619

Query: 428 AVVDGLRHSGCRREAKKI 445
            +++GL ++G   EA+ I
Sbjct: 620 IIINGLCNNGRVEEAETI 637



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 219/471 (46%), Gaps = 49/471 (10%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  +   C+ ++  KA  ++   +  G+LPD VTYN+L+D +C+    +  + 
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           I N M  AG+ PD  T+ +LI G  +   L  +  +L  M++ GI  D  ++ +L+  HC
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 521

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             ++GK  +   +F++M+         TFN  L+ L K+   + A  M   + K+G VP 
Sbjct: 522 --KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 579

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VT+ ILI+G C+AG    +  +L+ +  +G +PN  TYT I+     N + +    IL 
Sbjct: 580 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 639

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC--- 298
           +M   G + + F Y  ++ A VK GRL  A   +  MV +G Q +   Y+ L++ +    
Sbjct: 640 SMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 699

Query: 299 ---------KEGKLEAAYL---------LLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
                      G L+A  L         L +E++K G   +   +  L+ GLCK G I  
Sbjct: 700 TAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL-YNFLVVGLCKEGRIIE 758

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDSFTYSSMVH 396
           A    + M K G   + +A + I++   K  K D+ +     V ++  V    +Y  ++H
Sbjct: 759 ADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIH 817

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
            L    R                  ++ AQK V D +RH+G   E +   S
Sbjct: 818 GLRNEGR------------------VQEAQKLVSDLVRHTGIEEEVEVTPS 850



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD M E+G       Y++L+ CL +L     A  V++ M+          +  ++N LCK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 160 NRYTDNA-------LRMFRGLQKH-----------------------------GFVPELV 183
           N +   A       LR+  GL  H                                P  V
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ILI GLC+AGRL  A  + +E+ + G  P+  TYT ++K           +++L  M
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K    +   Y  +I    + G+++EA     +M+  G+   I+++N LIN YCKEG +
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            +A+ LL  MEK   + +  T+  L++GLC+      A L L  +   G   +   YN +
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           VD   K+G+++ A N+F SM       D FT+++++  LCK  RL  A+ +L S +K G+
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 420 RILKSAQKAVVDG 432
            + +    A++DG
Sbjct: 507 SLDEVTFTALIDG 519



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 219/491 (44%), Gaps = 58/491 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  ++E+A  +    ++ G+ P ++T+N LI+ YC+     + + +L+ M +    P+
Sbjct: 345 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 404

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN L+ G  R S    +  LL  +++ G+ PD  +YN L+    + G+ + A  +F 
Sbjct: 405 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 464

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   TF  +++GLCK    + A  +   + K G   + VT+  LI G CK G
Sbjct: 465 SMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 524

Query: 197 -----------------------------------RLRTARWILKELGDSGHAPNAITYT 221
                                              +L  A  +L ++   G  P+ +T+T
Sbjct: 525 KAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHT 584

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +++   R  +  L L++L  MK+ G + + + Y  +I      GR++EA   +  M + 
Sbjct: 585 ILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF 644

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV  +  +Y  L+  + K G+L+ A+ ++  M K G + + + ++ L+ G   +    GA
Sbjct: 645 GVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 704

Query: 342 R-------LHLEYMNKIGFDSNL-------------EAYNCIVDRLGKDGKIDHAINVFE 381
           R       L    ++    D+N              + YN +V  L K+G+I  A  + +
Sbjct: 705 RALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQ 764

Query: 382 SMEVKDSF---TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
            M     F     SS++ + CK  +  +  + +   L +      ++   V+ GLR+ G 
Sbjct: 765 DMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGR 824

Query: 439 RREAKKIQSKI 449
            +EA+K+ S +
Sbjct: 825 VQEAQKLVSDL 835


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 209/447 (46%), Gaps = 39/447 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTY++LI   C+    +  + +   M E G  P   TY  LI       +   ++ +
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM      P+V +Y  L+  L + GK +EAN VF+ M+   L P   TFN ++NG CK
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 316

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             +  +A ++   ++K    P + TYN L++GLC+  +   A  +L+ + D+G  P+ +T
Sbjct: 317 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 376

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    +  +  +   I ++M   G   DGF +  +I    K+GRL++A   +  MV
Sbjct: 377 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 436

Query: 280 TDGVQLDIVSYNTLINLYCKEG-----------------------------------KLE 304
             G+ LD V++  LI+ +CK G                                   KL 
Sbjct: 437 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 496

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L +M K G      THTILI+G C+AG    +   LE M + G   N+  Y  I+
Sbjct: 497 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 556

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L  +G+++ A  +  SM       + FTY+ +V    KA RL  A +++ + +K+G +
Sbjct: 557 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQS 447
                  A++ G   S     A+ + S
Sbjct: 617 PNSHIYSALLSGFVLSNTAIGARALSS 643



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 7/438 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAG 72
           V   CK   ++ AE      +RLG   D      L+ A C+       + +  +M +E  
Sbjct: 135 VNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEES 194

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
             P+ VTY+ LI G      L  +  L  EM+E G  P   +Y  L+     +G  D+A 
Sbjct: 195 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 254

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++  +M      P   T+ I+++ LC+    + A  +FR + KHG  P ++T+N LI G 
Sbjct: 255 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 314

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFD 251
           CK G + +A  +L  +      PN  TY  +M+  C  ++ YK  L +L  +   G   D
Sbjct: 315 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL-LLRRVVDNGLLPD 373

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F K G+L  A +    M + G++ D  ++  LI+  CK G+LE A  +L 
Sbjct: 374 RVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILG 433

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M K+G   D+ T T LIDG CK G  K      E M +    +    +NC +D LGKD 
Sbjct: 434 SMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDY 493

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K++ A  +   M     V    T++ ++   C+A     + K+L    ++G         
Sbjct: 494 KLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYT 553

Query: 428 AVVDGLRHSGCRREAKKI 445
            +++GL ++G   EA+ I
Sbjct: 554 IIINGLCNNGRVEEAETI 571



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 10/453 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  +   C+ ++  KA  ++   +  G+LPD VTYN+L+D +C+    +  + 
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 395

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           I N M  AG+ PD  T+ +LI G  +   L  +  +L  M++ GI  D  ++ +L+  HC
Sbjct: 396 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 455

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             ++GK  +   +F++M+         TFN  L+ L K+   + A  M   + K+G VP 
Sbjct: 456 --KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VT+ ILI+G C+AG    +  +L+ +  +G +PN  TYT I+     N + +    IL 
Sbjct: 514 VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF 573

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           +M   G + + F Y  ++ A VK GRL  A   +  MV +G Q +   Y+ L++ +    
Sbjct: 574 SMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 633

Query: 302 KLEAAYLL--LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
               A  L    +++ +    ++  +  L   + +  ++  A    + + K G  +  + 
Sbjct: 634 TAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE-DL 692

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSF---TYSSMVHNLCKAKRLPSASKLLLSCLK 416
           YN +V  L K+G+I  A  + + M     F     SS++ + CK  +  +  + +   L 
Sbjct: 693 YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLD 752

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +      ++   V+ GLR+ G  +EA+K+ S +
Sbjct: 753 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 785



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD M E+G       Y++L+ CL +L     A  V++ M+          +  ++N LCK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 160 NRYTDNA-------LRMFRGLQKH-----------------------------GFVPELV 183
           N +   A       LR+  GL  H                                P  V
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ILI GLC+AGRL  A  + +E+ + G  P+  TYT ++K           +++L  M
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K    +   Y  +I    + G+++EA     +M+  G+   I+++N LIN YCKEG +
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            +A+ LL  MEK   + +  T+  L++GLC+      A L L  +   G   +   YN +
Sbjct: 321 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 380

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           VD   K+G+++ A N+F SM       D FT+++++  LCK  RL  A+ +L S +K G+
Sbjct: 381 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440

Query: 420 RILKSAQKAVVDG 432
            + +    A++DG
Sbjct: 441 SLDEVTFTALIDG 453



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 201/443 (45%), Gaps = 40/443 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  ++E+A  +    ++ G+ P ++T+N LI+ YC+     + + +L+ M +    P+
Sbjct: 279 LCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 338

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN L+ G  R S    +  LL  +++ G+ PD  +YN L+    + G+ + A  +F 
Sbjct: 339 IRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFN 398

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   TF  +++GLCK    + A  +   + K G   + VT+  LI G CK G
Sbjct: 399 SMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIG 458

Query: 197 -----------------------------------RLRTARWILKELGDSGHAPNAITYT 221
                                              +L  A  +L ++   G  P+ +T+T
Sbjct: 459 KAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHT 518

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +++   R  +  L L++L  MK+ G + + + Y  +I      GR++EA   +  M + 
Sbjct: 519 ILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF 578

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV  +  +Y  L+  + K G+L+ A+ ++  M K G + + + ++ L+ G   +    GA
Sbjct: 579 GVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 638

Query: 342 RLHLEY--MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVH 396
           R       ++     S     NC+   + +   +DHA+ + + ++   V     Y+ +V 
Sbjct: 639 RALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVV 698

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            LCK  R+  A +L    +K G+
Sbjct: 699 GLCKEGRIIEADQLTQDMVKHGL 721


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 216/444 (48%), Gaps = 4/444 (0%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +   C+  R+ +A  +++     G  PDV++Y+ +I+ YC+F   D  + ++ +M++
Sbjct: 673  NIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQ 732

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G+ P+  TY S+I    R   L+ + +   EM+  GI PD   Y +L+    + G    
Sbjct: 733  KGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRA 792

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A++ F +M   D+TP   T+  +++G C+      A ++F  +   G  P+++T+  L+ 
Sbjct: 793  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            G CKAG ++ A  +   +  +G +PN +TYTT++    +        E+L  M + G   
Sbjct: 853  GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
            + F Y +++    K G ++EA   + +    G+  D V+Y TL++ YCK G+++ A  +L
Sbjct: 913  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972

Query: 311  DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             EM  +G +    T  +L++G C  G ++     L +M   G   N   +NC+V +    
Sbjct: 973  TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIR 1032

Query: 371  GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
              +  A  +++ M  +    D  TY ++V   C A+ +  A  L       G  +  S  
Sbjct: 1033 NNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTY 1092

Query: 427  KAVVDGLRHSGCRREAKKIQSKIR 450
              ++ G        EA++I  ++R
Sbjct: 1093 SVLIKGFFKRKKFVEAREIFDQMR 1116



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 198/410 (48%), Gaps = 5/410 (1%)

Query: 41   DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN-SLLSCSLDL 99
            D   +++      +F        +  +M   G+   V + N  +A  +++ +  + ++ +
Sbjct: 597  DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 100  LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              E  E+G+  +V SYN ++H + QLG+ +EA+ +   M     TP   +++ ++NG C+
Sbjct: 657  FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 160  NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                D   ++   +++ G  P   TY  +I  LC+  +L  A     E+   G  P+ I 
Sbjct: 717  FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776

Query: 220  YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            YTT++    +    +   +    M  +  T D   Y  +I+ F +IG + EA     +M+
Sbjct: 777  YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836

Query: 280  TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              G++ DI+++  L+N YCK G ++ A+ + + M + G   +  T+T LIDGLCK G++ 
Sbjct: 837  CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896

Query: 340  GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
             A   L  M KIG   N+  YN IV+ L K G I+ A+ +    E      D+ TY++++
Sbjct: 897  SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956

Query: 396  HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               CK+  +  A ++L   L  G++        +++G    G   + +K+
Sbjct: 957  DAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 182/401 (45%), Gaps = 35/401 (8%)

Query: 18   CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
            C+  +L +AE    + I  G+LPD + Y  L+D +C+     A       M    I+PDV
Sbjct: 750  CRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDV 809

Query: 78   VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            +TY ++I+G  +   +  +  L  EML  G+ PD+ ++  LM+   + G   +A RV   
Sbjct: 810  LTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNH 869

Query: 138  MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
            MI    +P   T+  +++GLCK    D+A  +   + K G  P + TYN ++ GLCK+G 
Sbjct: 870  MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929

Query: 198  LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDG 252
            +  A  ++ E   +G   + +TYTT+M    ++ +     EIL+ M  KG      TF+ 
Sbjct: 930  IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989

Query: 253  F--GYC------------------------TVIAAFVKI----GRLKEATDYMEQMVTDG 282
               G+C                        T     VK       LK AT   + M + G
Sbjct: 990  LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049

Query: 283  VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            V+ D  +Y  L+  +C    ++ A+ L  EM+ +GF     T+++LI G  K      AR
Sbjct: 1050 VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109

Query: 343  LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
               + M + G  ++ E ++   D   K  + D  ++  + +
Sbjct: 1110 EIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1150



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 175/357 (49%), Gaps = 9/357 (2%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYT 163
           + G  P V  ++     L + G   EA +VF+ M+   L     + N+ L  L K+   T
Sbjct: 593 DWGSDPRV--FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKT 650

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A+ +FR   + G    + +YNI+I  +C+ GR+  A  +L  +   G+ P+ I+Y+T+
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTV 710

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    R  +     +++  MK+KG   + + Y ++I    +I +L EA +   +M+  G+
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGAR 342
             D + Y TL++ +CK G + AA     EM  +    D  T+T +I G C+ G+ ++  +
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 398
           L  E + + G + ++  +  +++   K G I  A  V   M       +  TY++++  L
Sbjct: 831 LFHEMLCR-GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           CK   L SA++LL    K G++       ++V+GL  SG   EA K+  +   A ++
Sbjct: 890 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             N  V  +C  N L+ A AI  D    GV PD  TY  L+  +C   +    + +   M+
Sbjct: 1022 FNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMK 1081

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              G S  V TY+ LI G  +      + ++ D+M   G+  D   ++      ++  +PD
Sbjct: 1082 GKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPD 1141


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 207/407 (50%), Gaps = 6/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L I + +FC  NR++   +++    +LG  PD  T+  LI   C          + ++M 
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+ VTY +LI G  +      ++ LL  M++    P+V +YN+++ CLF+  + +
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +MI   ++P  +T+N +++GLCK     +   +   +     +P +V +  L+
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGY 248
             LCK G +  A  ++  +   G  P+ +TYT +M   C R+   +   ++   M RKG 
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEAD-KVFDTMVRKGC 350

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T+I  + KI R+ +A    E+M    +  +IV+YNTLI+  C  G+L  A  
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM   G   D  T+ IL+D LCK  ++  A   L+ +       ++++YN ++D + 
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           + G+++ A ++F S+  K    D +TY+ M++ LC    L  A+KL 
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLF 517



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 182/359 (50%), Gaps = 5/359 (1%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           C F K  ++ +A  I  + I  G+ P+V TYN +I   C+F  +    T++N M ++ I 
Sbjct: 223 CLF-KDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEAN 132
           P+VV + +L+    +  +++ + D++D M++ G+ PDV +Y +LM  HCL    + DEA+
Sbjct: 282 PNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL--RSEMDEAD 339

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           +VF  M+     P   +++ ++NG CK +  D A+ +F  + +   VP +VTYN LI GL
Sbjct: 340 KVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C  GRLR A  +  E+  SG  P+ +TY  ++    + R     + +L A++      D 
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  VI    ++G L+ A D    + + G+  D+ +Y  +IN  C +G L  A  L  E
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFRE 519

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M   G   D  T+ ++  G  +      A   L+ M   GF ++      IV+ L  DG
Sbjct: 520 MNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 203/414 (49%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+  DV T  ++I+++C     D G+++L ++ + G  PD  T+ +LI G      +  
Sbjct: 103 LGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGE 162

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  P+  +Y +L+H L ++G    A R+ + M+  +  P   T+N +++
Sbjct: 163 ALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIID 222

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L K+R  + AL +F  +   G  P + TYN +I GLCK    +    ++ E+ DS   P
Sbjct: 223 CLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMP 282

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + +TT++    +     +  +++  M ++G   D   Y  ++        + EA    
Sbjct: 283 NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF 342

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   +++SY+TLIN YCK  +++ A  L +EM ++    +  T+  LI GLC  
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV 402

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++ A      M   G   +L  Y  ++D L K   +D A+ + +++E      D  +Y
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + ++  +C+   L +A  L  S    G+         +++GL   G   EA K+
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516



 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 175/368 (47%), Gaps = 4/368 (1%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           F + D   +  NRM      P VV +  ++         S  L L  +M  +GIP DV++
Sbjct: 52  FNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYT 111

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
              +++    L + D    V   +      P TATF  ++ GLC       AL +F  + 
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             GF P  VTY  LI GLCK G  R A  +L+ +      PN ITY TI+ C F++R+  
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L I S M  KG + +   Y ++I    K    K     M +MV   +  ++V + TL+
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CKEG +  A+ ++D M ++G E D  T+T L+DG C    +  A    + M + G  
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            N+ +Y+ +++   K  +ID A+ +FE M     V +  TY++++H LC   RL  A  L
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 411 LLSCLKSG 418
               + SG
Sbjct: 412 FHEMVASG 419



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 187/398 (46%), Gaps = 4/398 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P VV +  ++ +      +    ++  +M   GI  DV T   +I      + +     +
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++ ++G  PD  ++ +L+  L   GK  EA  +F  M+     P   T+  +++GLCK
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              +  A+R+ R + +    P ++TYN +I  L K  ++  A  I  E+   G +PN  T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +I+    +  ++K    +++ M       +   + T++ A  K G +  A D ++ M+
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+Y  L++ +C   +++ A  + D M ++G   +  +++ LI+G CK   I 
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M +     N+  YN ++  L   G++  AI +F  M    ++ D  TY  ++
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             LCK + L  A  +L +   S +     +   V+DG+
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   RL  A A+  + +  G +PD+VTY +L+D  C+    D    +L  +  
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + ++PD+ +YN +I G  R   L  + DL   +   G+ PDVW+Y  +++ L   G   E
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F++M     +P   T+N++  G  +N  T +A+++ + +   GF  +  T  ++++
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 191 GLCKAGRLRTARWILKEL 208
            L   G  ++ + IL E 
Sbjct: 573 MLSDDGLDQSVKQILHEF 590



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 53/129 (41%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+   LE A  +       G+ PDV TY ++I+  C          +   M  
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPD  TYN +  G  RN+    ++ LL EML  G   D  +   ++  L   G    
Sbjct: 523 DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQS 582

Query: 131 ANRVFQDMI 139
             ++  + +
Sbjct: 583 VKQILHEFV 591



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M+  G   D YT  I+I+  C    +      L  + K+G   +   +  ++  L  +G
Sbjct: 99  QMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEG 158

Query: 372 KIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           KI  A+++F+ M V + F     TY +++H LCK     +A +LL S ++          
Sbjct: 159 KIGEALHLFDKM-VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             ++D L       EA  I S++    IS
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGIS 246


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 196/368 (53%), Gaps = 1/368 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V  +N+L+  +C+         + + +   G+ P VV++N+LI+G  R+  +   
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L   M    I PDV++Y++L++ L +  + +EAN +F +M    L P   TF  +++G
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK+   D ALR F  ++  G  P+L+TYN LI GLC+ G L+ AR +L E+  +G  P+
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+TT+M  C ++      LEI   M  +G   D   +  +I+   + GR+++A   ++
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M++ G + D  +Y  +I+ +CK+G ++    LL EM++ G      T+  L++G CK G
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQG 520

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG-KIDHAINVFESMEVKDSFTYSSMV 395
            +K A++ L  M  +    N   +N ++D   K G  +D  I   E   V D  +Y+++V
Sbjct: 521 QMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASYTALV 580

Query: 396 HNLCKAKR 403
           +   K  +
Sbjct: 581 NESIKISK 588



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L NI +  FCK   +  A  +  +  R G+ P VV++N LI  YC+  + + G+ + + M
Sbjct: 228 LFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVM 287

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               ISPDV TY++LI G  + S +  +  L DEM EMG+ P+  ++ +L+    + GK 
Sbjct: 288 ESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKI 347

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A R F+ M    + P   T+N ++NGLC++     A ++   +  +GF P+ +T+  L
Sbjct: 348 DLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G CK G + +A  I   + + G   + + +T ++    R+ + +    +L  M   G+
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGH 467

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  VI  F K G +K     +++M  DG    +V+YN L+N +CK+G+++ A +
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD--- 365
           LL  M       +  T  IL+DG CK G+    ++   +  + G  S+  +Y  +V+   
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKI---FNGEKGLVSDYASYTALVNESI 584

Query: 366 RLGKD 370
           ++ KD
Sbjct: 585 KISKD 589



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 165/322 (51%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+L+ G PP+V+ +N LMH   ++G    A  VF ++    L P   +FN +++G C+++
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             +    +   ++     P++ TY+ LI GLCK  R+  A  +  E+ + G  PN +T+T
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    ++ K  L L     MK +G   D   Y  +I    + G LKEA   + +M+ +
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + D +++ TL++  CK+G +++A  + D M ++G E D    T LI GLC+ G ++ A
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
              L+ M   G   +   Y  ++D   K G +     + + M+    V    TY+++++ 
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNG 515

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
            CK  ++ +A  LL + L   V
Sbjct: 516 FCKQGQMKNAKMLLHAMLNMEV 537



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 147/294 (50%), Gaps = 8/294 (2%)

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N+   +    +  +  +G+ P +  +NIL+ G CK G +  AR +  E+   G  P+ ++
Sbjct: 204 NQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVS 263

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           + T++    R++  + G  + S M+ +  + D F Y  +I    K  R++EA    ++M 
Sbjct: 264 FNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMC 323

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+  + V++ TLI+  CK GK++ A    + M+ +G   D  T+  LI+GLC+ G++K
Sbjct: 324 EMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLK 383

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            AR  L  M   GF  +   +  ++D   KDG +D A+ + + M  +    D   +++++
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALI 443

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LC+  R+  A ++L   L +G +        V+D      C++   K+ +K+
Sbjct: 444 SGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCF----CKKGDVKMGAKL 493


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 222/436 (50%), Gaps = 8/436 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + ++ G   D +T+  L+   C    + DA   +L RM E G  PD
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPD 162

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +YN+L+ G    +    +L+LL  M +    G PPDV SYN++++  F+ G  D+A  
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   + P   T++ ++  LCK +  D A+ +   + K+G +P+ +TYN ++ G C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G+ + A   LK++   G  PN +TY+++M    +N +     +I  +M ++G   D  
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++  +   G L E    ++ MV +G+Q D   +N LI  Y K+ K++ A L+  +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G   +   +  +ID LCK+G++  A L+ E M   G   N+  Y  ++  L    K 
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +   M  +    ++  ++S++ + CK  R+  + KL    ++ GV+        +
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 430 VDGLRHSGCRREAKKI 445
           +DG   +G   EA K+
Sbjct: 523 IDGCCLAGKMDEATKL 538



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 213/440 (48%), Gaps = 7/440 (1%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            C  NR ++A  ++    D    G  PDVV+YN +++ + +    D  Y+  + M + GI
Sbjct: 173 LCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI 232

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTY+S+IA   +   +  ++++L+ M++ G+ PD  +YNS++H     G+P EA  
Sbjct: 233 LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 292

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             + M    + P   T++ ++N LCKN  +  A ++F  + K G  P++ TY  L++G  
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA 352

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L     +L  +  +G  P+   +  ++    +  K    + + S M++ G   +  
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y TVI    K G + +A  Y EQM+ +G+  +I+ Y +LI+  C   K + A  L+ EM
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G   +      +ID  CK G +  +    + M +IG   ++  YN ++D     GK+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +  SM       D  TY ++++  C+  R+  A  L    + SGV         +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           + GL H+     AK++   I
Sbjct: 593 LQGLFHTRRTAAAKELYVSI 612



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 4/391 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA  ++KA  ++   ++ GV+PD +TYN ++  YC           L +MR  G+
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY+SL+    +N   + +  + D M + G+ PD+ +Y +L+      G   E + 
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    FNI++    K    D A+ +F  +++HG  P +V Y  +I  LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+G +  A    +++ D G  PN I YT+++       K+    E++  M  +G   +  
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ DI++YNTLI+  C  GK++ A  LL  M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G C+   +  A    + M   G   N+  YN I+  L    + 
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 374 DHAINVFESMEVKDS----FTYSSMVHNLCK 400
             A  ++ S+    +     TY+ ++H LCK
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCK 633



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 187/391 (47%), Gaps = 10/391 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P V TY +LI   C+    D G+  L  + + G   D +T+  L+ G   +   S ++
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIM 153
           D+ L  M E+G  PDV+SYN+L+  L    +  EA  +   M     G   P   ++N +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           LNG  K   +D A   +  +   G +P++VTY+ +I  LCKA  +  A  +L  +  +G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY +I+     + + K  +  L  M+  G   +   Y +++    K GR  EA  
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             + M   G++ DI +Y TL+  Y  +G L   + LLD M + G + D +   ILI    
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT--- 390
           K   +  A L    M + G + N+  Y  ++D L K G +D A+  FE M + +  T   
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM-IDEGLTPNI 446

Query: 391 --YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             Y+S++H LC   +   A +L+L  L  G+
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 176/368 (47%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +C + K  ++++A  +     + G+ P+VV Y  +ID  C+  S D       +M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G++P+++ Y SLI G         + +L+ EML+ GI  +   +NS++    + G+ 
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T+N +++G C     D A ++   +   G  P++VTY  L
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C+  R+  A  + KE+  SG +PN ITY  I++  F  R+     E+  ++ + G 
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+++ A  
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L       G   D  T++++ + L + G+++        M + G  ++    N IV +L 
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 738 QRGDITRA 745



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 137/271 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  + + CK  R+ ++E +    +R+GV PD++TYN LID  C     D    +
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD+VTY +LI G  R S +  +L L  EM+  G+ P++ +YN ++  LF 
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 658

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR+  A+ +      +G  P+  TY+ + +        +   ++  +M+
Sbjct: 659 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             G + D     +++   ++ G +  A  Y+
Sbjct: 719 ENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 14/334 (4%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 155
           + DE+L  G    ++  N  +  + +   P  A   +  M     G +TP   T+ I++ 
Sbjct: 42  VFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHA 214
             C+    D        + K GF  + +T+  L+KGLC   R   A   +L+ + + G  
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           P+  +Y  ++K  C  NR  +  LE+L  M   +  G   D   Y TV+  F K G   +
Sbjct: 161 PDVFSYNNLLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A     +M+  G+  D+V+Y+++I   CK   ++ A  +L+ M K G   D  T+  ++ 
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G C +G  K A   L+ M   G + N+  Y+ +++ L K+G+   A  +F+SM  +    
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D  TY +++        L     LL   +++G++
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 37/241 (15%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P   TY  ++ CC R  +  LG   L  + +KG+  D   +  ++       R  +A D 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           + + +T+ G   D+ SYN L+   C E + + A  LL  M                    
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM-------------------- 189

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
              + +G           G   ++ +YN +++   K+G  D A + +  M     + D  
Sbjct: 190 --ADDRGG----------GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TYSS++  LCKA+ +  A ++L + +K+GV        +++ G   SG  +EA     K+
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 450 R 450
           R
Sbjct: 298 R 298


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 206/388 (53%), Gaps = 23/388 (5%)

Query: 41  DVVTYNMLIDAYCQF-VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           DV +YN L+D   +    F  G  +   +  +G SP++VT+  LI G  +    + +L+ 
Sbjct: 26  DVHSYNHLLDILVKSGHQFRTG-KVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEF 84

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  + E  + PDV+ +N L+H LF+ G PD+A ++F++M    + P   T+N +++GLCK
Sbjct: 85  LRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCK 144

Query: 160 NRYTDNALRMFRGLQKHG--FVPELVTYNILIK-GLCKAGRLRTARWILKELGDSGHAPN 216
           +   + A  +   + + G    P++VTYN LI  G+CK G +  A  IL  +  +G AP+
Sbjct: 145 SGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPD 204

Query: 217 AITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
            ITY +I+   C   R  +   EIL  M     + D   + T++  F K G L  A + +
Sbjct: 205 VITYNSIIHALCVAGRVVE-AAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M  + +  D+++Y  L+N  C+ G+++ A+ LL+E+ +QG+  D   +T L+DGLCK+
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 336 GNIK---------GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 383
           G I+          AR  L  M  I     L  YN ++  L KDG I  A+++   +   
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 380

Query: 384 -EVKDSFTYSSMVHNLCKAKRLPSASKL 410
             V D  TY++++  LCKA R+  A  L
Sbjct: 381 GYVPDVVTYNTLIDGLCKANRVREACDL 408



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 203/441 (46%), Gaps = 54/441 (12%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA +  +A   +       V PDV  +N LI    +  + D    +   M  + ++PD+
Sbjct: 73  CKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDI 132

Query: 78  VTYNSLIAG----------------------------ATRNSLLSC----------SLDL 99
            TYN++I+G                             T N+L++           +L++
Sbjct: 133 FTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEI 192

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LD M   G  PDV +YNS++H L   G+  EA  + + M C   +P   TFN +L+G CK
Sbjct: 193 LDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLVTFNTLLDGFCK 249

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 AL +   + +   +P+++TY IL+ GLC+ G+++ A ++L+E+   G+ P+ I 
Sbjct: 250 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 309

Query: 220 YTTIM----KCCFRNRKYKL-----GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           YT+++    K       +KL       EIL+ M         F Y  V+   +K G + +
Sbjct: 310 YTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 369

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  +V  G   D+V+YNTLI+  CK  ++  A  L DEM   G   +  T   ++ 
Sbjct: 370 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVF 429

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLC+ G +  A   +  M++     N+  Y  ++D L K  ++D A  V ++M  +    
Sbjct: 430 GLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVAL 489

Query: 387 DSFTYSSMVHNLCKAKRLPSA 407
           D F Y  ++ ++    R+  A
Sbjct: 490 DDFAYRKLIVSMIHGGRVAEA 510



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 195/385 (50%), Gaps = 15/385 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDA-YCQFVSFDAGYTILNR 67
           N  +   CK+  LEKA  ++ + IR G    PD+VTYN LI+A  C+    +    IL+ 
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDG 195

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+ AG +PDV+TYNS+I        +  + ++L  M      PD+ ++N+L+    + G 
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGM 252

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A  V ++M   ++ P   T+ I++NGLC+      A  +   + + G++P+++ Y  
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312

Query: 188 LIKGLCKAGRLR---------TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           L+ GLCK+G +          +AR IL E+      P   TY  ++    ++      + 
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           ++S +  +GY  D   Y T+I    K  R++EA D  ++M + G   + V+  +++   C
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLC 432

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           + G+++ A+ L+ EM ++    +   +T LIDGLCK+  +  A + L+ M   G   +  
Sbjct: 433 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDF 492

Query: 359 AYNCIVDRLGKDGKIDHAINVFESM 383
           AY  ++  +   G++  A+ +++ M
Sbjct: 493 AYRKLIVSMIHGGRVAEAMAMYDEM 517



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 160/327 (48%), Gaps = 12/327 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C A R+ +A  I+     +   PD+VT+N L+D +C+         +L  M  
Sbjct: 209 NSIIHALCVAGRVVEAAEILK---TMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 265

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I PDV+TY  L+ G  R   +  +  LL+E++  G  PDV +Y SL+  L + G+ +E
Sbjct: 266 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 325

Query: 131 ANR---------VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           A++         +  +M+  ++ P   T+NI+L GL K+     A+ +   L   G+VP+
Sbjct: 326 AHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 385

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VTYN LI GLCKA R+R A  +  E+   G  PN +T  +++    R  +      ++ 
Sbjct: 386 VVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 445

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M RK +  +   Y ++I    K  R+ +A   ++ M   GV LD  +Y  LI      G
Sbjct: 446 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGG 505

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++  A  + DEM  +GF  D  T   L
Sbjct: 506 RVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 54/387 (13%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G   DV SYN L+  L + G      +V++D++    +P   TF I++ G CK      A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 167 LRMFRGLQK--------------HGFV---------------------PELVTYNILIKG 191
           L   R L +              HG                       P++ TYN +I G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 192 LCKAGRLRTARWILKELGDSG--HAPNAITYTTIMKCCF-RNRKYKLGLEILSAMKRKGY 248
           LCK+G L  AR +L+E+   G   AP+ +TY T++     ++   +  LEIL  MK  G 
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y ++I A    GR+ EA + ++ M       D+V++NTL++ +CK G L  A  
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L+EM ++    D  T+TIL++GLC+ G ++ A   LE + + G+  ++ AY  +VD L 
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 369 KDGKIDHAINVFESMEVKDS-------------FTYSSMVHNLCKAKRLPSASKLLLSCL 415
           K G+I+ A  + + M  ++              FTY+ ++  L K   +  A  L+   +
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 378

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREA 442
             G          ++DGL  +   REA
Sbjct: 379 ARGYVPDVVTYNTLIDGLCKANRVREA 405



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 6/243 (2%)

Query: 174 QKHGFVPELVTYNILIKGLCKAG-RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++ G+  ++ +YN L+  L K+G + RT + + K+L  SG +PN +T+  +++   +  +
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGK-VYKDLLHSGCSPNLVTFKILIRGNCKAGQ 77

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               LE L A+       D + +  +I    K G   +A    E M +  V  DI +YNT
Sbjct: 78  ATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNT 137

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID-GLCKAGNIKGARLHLEYMN 349
           +I+  CK G LE A  LL+EM ++G +   D  T+  LI+ G+CK G+++ A   L+ M 
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAKRLPSAS 408
             G   ++  YN I+  L   G++  A  + ++M    D  T+++++   CKA  LP A 
Sbjct: 198 LAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRAL 257

Query: 409 KLL 411
           ++L
Sbjct: 258 EVL 260



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 108/227 (47%), Gaps = 9/227 (3%)

Query: 17  FCKANRLEKAE---------AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            CK+  +E+A           I+ + + + ++P + TYN+++    +  S     ++++ 
Sbjct: 317 LCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISD 376

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +   G  PDVVTYN+LI G  + + +  + DL DEM  +G  P+  +  S++  L ++G+
Sbjct: 377 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGR 436

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A  +  +M      P    +  +++GLCK+   D+A  +   ++  G   +   Y  
Sbjct: 437 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRK 496

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           LI  +   GR+  A  +  E+   G  P+  T  T+ +    N  ++
Sbjct: 497 LIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 45/231 (19%)

Query: 229 RNRKYKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
           R+ +  L ++    A ++ GY  D   Y  ++   VK G         + ++  G   ++
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL--------------- 332
           V++  LI   CK G+   A   L  +++     D Y    LI GL               
Sbjct: 63  VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 333 --------------------CKAGNIKGARLHLEYMNKIGFDS--NLEAYNCIVDR-LGK 369
                               CK+GN++ AR  LE M + G  S  ++  YN +++  + K
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL--LSC 414
           DG ++ A+ + + M++     D  TY+S++H LC A R+  A+++L  +SC
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC 233



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L   V   C+  R++ A +++++  R    P+VV Y  LID  C+    D    +L+ MR
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMR 483

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             G++ D   Y  LI        ++ ++ + DEM+  G  PD
Sbjct: 484 GQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 227/478 (47%), Gaps = 45/478 (9%)

Query: 11  NICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +   C  NR ++A    + +  DG      PDVV+Y  +I+ + +    D  Y   +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGG--DCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + GI P+VVTY+S+IA   +   +  ++++L  M++ G+ P+  +YNS++H     G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P EA    + M    + P   T+N +++ LCKN     A +MF  + K G  PE+ TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L++G    G L     +L  +  +G  PN   ++ ++    +  K    + + S M+++
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------------------------- 281
           G   D   Y TVI    K GR+++A  Y EQM+ +                         
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 282 ----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                     G+ LD + +N++I+ +CKEG++  +  L D M + G + D  T++ LIDG
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            C AG +  A   L  M  +G   +   YN +++   K  +++ A+ +F  ME      D
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             TY+ ++  L + +R  +A +L +   +SG ++  S    ++ GL  +    EA ++
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 209/436 (47%), Gaps = 4/436 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA  ++KA  ++   ++ GV+P+  TYN ++  YC           L +M   G+
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYNSL+    +N   + +  + D M + G+ P++ +Y +L+      G   E + 
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    F+I++    K    D A+ +F  +++ G  P+ VTY  +I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+GR+  A    +++ D   +P  I Y +++       K+    E++  M  +G   D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ DI++Y+TLI+ YC  GK++ A  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G CK   ++ A +    M   G   ++  YN I+  L +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 DHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A    + + ES    +  TY+ ++H LCK      A ++  +   + +++       +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 430 VDGLRHSGCRREAKKI 445
           +  L   G   EAK +
Sbjct: 661 IGALLKVGRNDEAKDL 676



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 216/441 (48%), Gaps = 7/441 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMRE 70
           I + + C A RL+   A + + I+ G   D + +  L+   C    + DA   +L RM +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKP 128
            G  P+V +YN L+ G    +    +L+LL  M + G   PPDV SY ++++  F+ G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   + +M+   + P   T++ ++  LCK +  D A+ +   + K+G +P   TYN +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G C +G+ + A   LK++   G  P+ +TY ++M    +N +     ++  +M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T++  +   G L E    ++ MV +G+  +   ++ LI  Y K+GK++ A L
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +M +QG   D  T+  +I  LCK+G ++ A  + E M           YN ++  L 
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              K D A  +   M  +    D+  ++S++ + CK  R+  + KL    ++ GV+    
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++DG   +G   EA K+
Sbjct: 516 TYSTLIDGYCLAGKMDEATKL 536



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 12/418 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P++ TY +LI + C     D G+  L  + + G   D + +  L+ G   +   S ++
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 154
           D+ L  M ++G  P+V+SYN L+  L    +  EA  + Q M    GD  P   ++  ++
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG  K    D A   +  +   G +P +VTY+ +I  LCKA  +  A  +L  +  +G  
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TY +I+     + + K  +  L  M   G   D   Y +++    K GR  EA   
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   + Y  +ILI    K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G +  A L    M + G + +   Y  ++  L K G+++ A+  FE M        +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           Y+S++H+LC   +   A +L+L  L  G+ +      +++D    S C +E + I+S+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID----SHC-KEGRVIESE 499



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 185/389 (47%), Gaps = 14/389 (3%)

Query: 60  AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           A  +  NRM  AG   ++P++ TY  LI        L      L  +++ G   D  ++ 
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 117 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            L+  L    +  +A + V + M      P   ++NI+L GLC    +  AL + + +  
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 176 HGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            G    P++V+Y  +I G  K G L  A     E+ D G  PN +TY++I+    + +  
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L++M + G   +   Y +++  +   G+ KEA  ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK G+   A  + D M K+G + +  T+  L+ G    G +      L+ M + G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             N   ++ ++    K GK+D A+ VF  M  +    D+ TY +++  LCK+ R+  A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
                +   +    S    V + L HS C
Sbjct: 431 YFEQMIDERL----SPGNIVYNSLIHSLC 455



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  + + CK  R+ ++E +    +R+GV PD++TY+ LID YC     D    +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD VTYN+LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +   L  +G  P+  TY+ + +        +   ++  +M+
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T +     +++   ++ G +  A  Y+  +      L+  + +  ++L    GK +
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL-SGGKYQ 775

Query: 305 AAYLLLDEMEKQGFE 319
             +  L E  K   E
Sbjct: 776 EYHRFLPEKYKSFIE 790



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 169/368 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C + K  ++++A  +     + G+ PD VTY  +I   C+    +       +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  +SP  + YNSLI           + +L+ EML+ GI  D   +NS++    + G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTYN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + +E+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+ + A  
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D  T++++ + L + G ++        M + G  +N    N IV +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 736 QRGDITRA 743



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 9/366 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + LN    T+       CK+ R+E A       I   + P  + YN LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F  +D    ++  M + GI  D + +NS+I    +   +  S  L D M+ +G+ PD+ 
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y++L+      GK DEA ++   M+   + P   T+N ++NG CK    ++AL +FR +
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P+++TYNI+++GL +  R   A+ +   + +SG      TY  I+    +N   
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +   +       +   +  +I A +K+GR  EA D    +  +G+  D+ +Y+ +
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
                ++G LE    L   ME+ G   +      ++  L + G+I  A  +L  +++  F
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 354 DSNLEA 359
             +LEA
Sbjct: 756 --SLEA 759



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 43/371 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+   +++LI AY +    D    + ++MR+ G++PD VTY ++I    ++  +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++  + P    YNSL+H L    K D+A  +  +M+   +   T  FN +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P+++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY T++                             GYC       KI R+++A  
Sbjct: 546 KPDCVTYNTLIN----------------------------GYC-------KISRMEDALV 570

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K  N+    L + + N    D  LE   +N ++  L K G+ D A ++F ++     V D
Sbjct: 631 K-NNLTDEALRM-FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 388 SFTYSSMVHNL 398
             TYS M  NL
Sbjct: 689 VRTYSLMAENL 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 11/331 (3%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
           + DE+L  G    ++  N  +  + +       +R  +    G  ++TP   T+ I++  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
            C     D        + K GF  + + +  L+KGLC   R   A   +L+ +   G  P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 272
           N  +Y  ++K  C  NR  +  LE+L  M   G     D   Y TVI  F K G L +A 
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +M+  G+  ++V+Y+++I   CK   ++ A  +L  M K G   +  T+  ++ G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C +G  K A   L+ M+  G + ++  YN ++D L K+G+   A  +F+SM  +    + 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            TY +++        L     LL   +++G+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 204/407 (50%), Gaps = 4/407 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C   ++++A       + LG   D ++Y  LI   C+     A   +L R+    + P+V
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V YN++I    +  L++ + DL  EM+  GI PDV +Y++L+     LGK ++A  +F  
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI  ++ P   TFNI++N  CK+        +F  + K G  P  VTYN L+ G C    
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A+ I   +   G  P+  +Y+ ++    + +K+   + +   M RK    D   Y +
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K GR+  A   ++QM   GV   I +YN++++  CK  +++ A  LL +++ +G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + + YT++ILI GLC++G ++ AR   E +   G + N++ Y  ++     +G  + A+
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            +   ME    + D+ TY  ++ +L K      A KLL   +  GVR
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR 572



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 172/328 (52%), Gaps = 4/328 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   + +A  +  + I  G+ PDVVTY+ LI  +C     +    + N+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLG 126
               I PDV T+N L+    ++  +     + D M++ GI P+  +YNSLM  +CL +  
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK-- 344

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + ++A  +F  M  G + P   +++IM+NG CK +  D A+ +F+ + +   +P++VTY+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL K+GR+  A  ++ ++ D G  P   TY +I+    +  +    + +L+ +K K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + + Y  +I    + G+L++A    E ++  G  L++ +Y  +I  +C EG    A
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCK 334
             LL +ME  G   D  T+ I+I  L K
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFK 552



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P++V  N+LI+ +CQ       +++  ++ + G  PD +T+ +LI G      +  +
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               D+++ +G   D  SY +L+H L ++G+   A  + Q +    + P    +N +++ 
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK +  + A  +F  +   G  P++VTY+ LI G C  G+L  A  +  ++      P+
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    ++ K K G  +   M ++G   +   Y +++  +  +  + +A     
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  DI SY+ +IN +CK  K + A  L  EM ++    D  T++ LIDGL K+G
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   ++ M+  G    +  YN I+D L K  ++D AI +   ++ K    + +TYS
Sbjct: 415 RISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYS 474

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++  LC++ +L  A K+    L  G  +       ++ G    G   EA  + SK+ 
Sbjct: 475 ILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME 532



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 4/379 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   ++ NR+     +P    +N ++    ++      L L  +M   GI P++ + N L
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C  QLG    A  VF  ++     P T TF  ++ GLC       A      +   GF
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             + ++Y  LI GLCK G  R A  +L+ +  +   PN + Y TI+    + +      +
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + S M  KG + D   Y  +I+ F  +G+L +A D   +M+ + ++ D+ ++N L+N +C
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K+GK++    + D M KQG + +  T+  L+DG C    +  A+     M + G + +++
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           +Y+ +++   K  K D A+N+F+ M     + D  TYSS++  L K+ R+  A +L+   
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 415 LKSGVRILKSAQKAVVDGL 433
              GV        +++D L
Sbjct: 427 HDRGVPPTIRTYNSILDAL 445



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 141/275 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V  FCK  ++++ + +    ++ G+ P+ VTYN L+D YC     +   +I N M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++PD+ +Y+ +I G  +      +++L  EM    I PDV +Y+SL+  L + G+  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++   M    + P   T+N +L+ LCK    D A+ +   L+  G  P + TY+ILI
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC++G+L  AR + + L   GH  N  TYT +++       +   L +LS M+  G  
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            D   Y  +I +  K      A   + +M+  GV+
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR 572



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 39/363 (10%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SY+S           D+A  +F  ++  + TP    FN +L  L K+++    L + + +
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P LV  NILI   C+ G +  A  +  ++   G+ P+ IT+TT++K      + 
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQI 171

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK------------------------ 269
           +        +   G+ FD   Y T+I    K+G  +                        
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 270 -----------EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
                      EA D   +M++ G+  D+V+Y+ LI+ +C  GKL  A  L ++M  +  
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           + D YT  IL++  CK G +K  +   + M K G   N   YN ++D      +++ A +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 379 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +F +M       D  +YS M++  CK K+   A  L     +  +        +++DGL 
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 435 HSG 437
            SG
Sbjct: 412 KSG 414



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 35/237 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C    + KA++I     + GV PD+ +Y+++I+ +C+   FD    +   M    I PD
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF------------- 123
           VVTY+SLI G +++  +S +L L+D+M + G+PP + +YNS++  L              
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459

Query: 124 ----------------------QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                                 Q GK ++A +VF+ ++         T+ IM+ G C   
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEG 519

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
             + AL +   ++ +G +P+  TY I+I  L K      A  +L+E+   G  P  I
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 4/222 (1%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I+Y++       N      + + + + R+  T   F +  ++ + VK           
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   G++ ++V+ N LIN +C+ G +  A+ +  ++ K G+  D  T T LI GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G I+ A L  + +  +GF  +  +Y  ++  L K G+   A+++ + ++      +   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           ++++ ++CK K +  A  L    +  G+        A++ G 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  N  +   CK ++++KA A++      G+ P++ TY++LI   CQ    +    + 
Sbjct: 434 TIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF 493

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             +   G + +V TY  +I G     L + +L LL +M + G  PD  +Y  ++  LF+ 
Sbjct: 494 EGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553

Query: 126 GKPDEANRVFQDMICGDLTP 145
            + D A ++ ++MI   + P
Sbjct: 554 DENDMAEKLLREMIARGVRP 573


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 227/478 (47%), Gaps = 45/478 (9%)

Query: 11  NICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +   C  NR ++A    + +  DG      PDVV+Y  +I+ + +    D  Y   +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGG--DCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + GI P+VVTYNS+IA   +   +  ++++L  M++ G+ P+  +YNS++H     G
Sbjct: 224 EMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P EA    + M    + P   T+N +++ LCKN     A +MF  + K G  PE+ TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L++G    G L     +L  +  +G  PN   ++ ++    +  K    + + S M+++
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------------------------- 281
           G   D   Y TVI    K GR+++A  Y EQM+ +                         
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 282 ----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                     G+ LD + +N++I+ +CKEG++  +  L D M + G + +  T++ LIDG
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDG 523

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            C AG +  A   L  M  +G   +   YN +++   K  +++ A+ +F  ME      D
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             TY+ ++  L + +R  +A +L +   +SG ++  S    ++ GL  +    EA ++
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 210/439 (47%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA  ++   ++ GV+P+  TYN ++  YC           L +M  
Sbjct: 238 NSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTYNSL+    +N   + +  + D M + G+ P++ +Y +L+      G   E
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   + P    F+I++    K    D A+ +F  +++ G  P+ VTY  +I 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+GR+  A    +++ D   +P  I Y +++       K+    E++  M  +G   
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + ++I +  K GR+ E+    + MV  GV+ +I++Y+TLI+ YC  GK++ A  LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M   G + D  T+  LI+G CK   ++ A +    M   G   ++  YN I+  L + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 371 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +   A    + + ES    +  TY+ ++H LCK      A ++  +   + +++     
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++  L   G   EAK +
Sbjct: 658 NIMIGALLKVGRNDEAKDL 676



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 216/441 (48%), Gaps = 7/441 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMRE 70
           I + + C A RL+   A + + I+ G   D + +  L+   C    + DA   +L RM +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKP 128
            G  P+V +YN L+ G    +    +L+LL  M + G   PPDV SY ++++  F+ G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   + +M+   + P   T+N ++  LCK +  D A+ +   + K+G +P   TYN +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G C +G+ + A   LK++   G  P+ +TY ++M    +N +     ++  +M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T++  +   G L E    ++ MV +G+  +   ++ LI  Y K+GK++ A L
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +M +QG   D  T+  +I  LCK+G ++ A  + E M           YN ++  L 
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              K D A  +   M  +    D+  ++S++ + CK  R+  + KL    ++ GV+    
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNII 515

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++DG   +G   EA K+
Sbjct: 516 TYSTLIDGYCLAGKMDEATKL 536



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 196/418 (46%), Gaps = 12/418 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P++ TY +LI + C     D G+  L  + + G   D + +  L+ G   +   S ++
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 154
           D+ L  M ++G  P+V+SYN L+  L    +  EA  + Q M    GD  P   ++  ++
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG  K    D A   +  +   G +P +VTYN +I  LCKA  +  A  +L  +  +G  
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TY +I+     + + K  +  L  M   G   D   Y +++    K GR  EA   
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   + Y  +ILI    K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G +  A L    M + G + +   Y  ++  L K G+++ A+  FE M        +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           Y+S++H+LC   +   A +L+L  L  G+ +      +++D    S C +E + I+S+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID----SHC-KEGRVIESE 499



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 184/389 (47%), Gaps = 14/389 (3%)

Query: 60  AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           A  +  NRM  AG   ++P++ TY  LI        L      L  +++ G   D  ++ 
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 117 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            L+  L    +  +A + V + M      P   ++NI+L GLC    +  AL + + +  
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 176 HGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            G    P++V+Y  +I G  K G L  A     E+ D G  PN +TY +I+    + +  
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAM 250

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L++M + G   +   Y +++  +   G+ KEA  ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK G+   A  + D M K+G + +  T+  L+ G    G +      L+ M + G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             N   ++ ++    K GK+D A+ VF  M  +    D+ TY +++  LCK+ R+  A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
                +   +    S    V + L HS C
Sbjct: 431 YFEQMIDERL----SPGNIVYNSLIHSLC 455



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 153/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  + + CK  R+ ++E +    +R+GV P+++TY+ LID YC     D    +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKL 536

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD VTYN+LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +   L  +G  P+  TY+ + +        +   ++  +M+
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T +     +++   ++ G +  A  Y+  +      L+  + +  ++L    GK +
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL-SGGKYQ 775

Query: 305 AAYLLLDEMEKQGFE 319
             +  L E  K   E
Sbjct: 776 EYHRFLPEKYKSFIE 790



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 169/368 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C + K  ++++A  +     + G+ PD VTY  +I   C+    +       +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  +SP  + YNSLI           + +L+ EML+ GI  D   +NS++    + G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTYN L
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + +E+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+ + A  
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D  T++++ + L + G ++        M + G  +N    N IV +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 736 QRGDITRA 743



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 174/366 (47%), Gaps = 9/366 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + LN    T+       CK+ R+E A       I   + P  + YN LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F  +D    ++  M + GI  D + +NS+I    +   +  S  L D M+ +G+ P++ 
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNII 515

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y++L+      GK DEA ++   M+   + P   T+N ++NG CK    ++AL +FR +
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P+++TYNI+++GL +  R   A+ +   + +SG      TY  I+    +N   
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +   +       +   +  +I A +K+GR  EA D    +  +G+  D+ +Y+ +
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
                ++G LE    L   ME+ G   +      ++  L + G+I  A  +L  +++  F
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 354 DSNLEA 359
             +LEA
Sbjct: 756 --SLEA 759



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 176/371 (47%), Gaps = 43/371 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+   +++LI AY +    D    + ++MR+ G++PD VTY ++I    ++  +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++  + P    YNSL+H L    K D+A  +  +M+   +   T  FN +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P ++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY T++                             GYC       KI R+++A  
Sbjct: 546 KPDCVTYNTLIN----------------------------GYC-------KISRMEDALV 570

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K  N+    L + + N    D  LE   +N ++  L K G+ D A ++F ++     V D
Sbjct: 631 K-NNLTDEALRM-FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 388 SFTYSSMVHNL 398
             TYS M  NL
Sbjct: 689 VRTYSLMAENL 699



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 149/331 (45%), Gaps = 11/331 (3%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
           + DE+L  G    ++  N  +  + +       +R  +    G  ++TP   T+ I++  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
            C     D        + K GF  + + +  L+KGLC   R   A   +L+ +   G  P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 272
           N  +Y  ++K  C  NR  +  LE+L  M   G     D   Y TVI  F K G L +A 
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +M+  G+  ++V+YN++I   CK   ++ A  +L  M K G   +  T+  ++ G 
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           C +G  K A   L+ M+  G + ++  YN ++D L K+G+   A  +F+SM  +    + 
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            TY +++        L     LL   +++G+
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 210/414 (50%), Gaps = 7/414 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV+ YN ++  YC     DA         E  +  D  T ++LI G       + +L +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEML     PDV +Y  L+    +     +A ++  +M     TP   T+N+++NG+C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D+A+   + L  +G  P  V+YNI++KGLC A R   A  ++ E+G  G  PN +T
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    R    +  LE+L  + + G + +   Y  ++ AF K  ++ +A  +++ MV
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   DIVSYNTL+   C+ G+++ A  LL +++ +G      ++  +IDGL KAG  K
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYSSMV 395
            A   L  M   G   ++  Y+ I   L ++ +I+ AI  F   + M ++ ++  Y++++
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 482

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +   SA  L    + +G    +S    +++GL + G  +EA+ +  ++
Sbjct: 483 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 183/367 (49%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R   A A++ + +R   +PDVVTY +L++A C+   +     +L+ MR+ G +PD
Sbjct: 170 LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 229

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN ++ G  +   +  +++ L  +   G  P+  SYN ++  L    + ++A  +  
Sbjct: 230 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 289

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   TFN++++ LC+    + AL +   + K+G  P  ++YN L+   CK  
Sbjct: 290 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK 349

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A   L  +   G  P+ ++Y T++    R+ +  + +E+L  +K KG       Y 
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           TVI    K G+ KEA + + +MV+ G+Q DI++Y+T+    C+E ++E A     +++  
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +   +  +I GLCK      A     YM   G   N   Y  +++ L  +G I  A
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529

Query: 377 INVFESM 383
            ++ + +
Sbjct: 530 RDLLDEL 536



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 151/317 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   C+  R++ A   + +    G  P+ V+YN+++   C    ++    ++  M +
Sbjct: 234 NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQ 293

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVT+N LI+   R  L+  +L++L+++ + G  P+  SYN L+H   +  K D+
Sbjct: 294 KGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDK 353

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      M+     P   ++N +L  LC++   D A+ +   L+  G  P L++YN +I 
Sbjct: 354 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 413

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+ + A  +L E+   G  P+ ITY+TI     R  + +  +     ++  G   
Sbjct: 414 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 473

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K      A D    M+ +G   +  +Y  LI     EG ++ A  LL
Sbjct: 474 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 533

Query: 311 DEMEKQGFECDKYTHTI 327
           DE+  +G E     H I
Sbjct: 534 DELCSRGEEILLDVHLI 550



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 37/290 (12%)

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  L +    D ALR+    ++    P+  T   LIK L  +GR   AR +L   G    
Sbjct: 74  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 129

Query: 214 APNAITY----------------------------TTIMKCCFRNRKYKLGLEILSAMKR 245
           A NA+                              T I   C R R     L +L  M R
Sbjct: 130 AYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTAN-ALAVLDEMLR 188

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +    D   Y  ++ A  K    K+A   +++M   G   DIV+YN ++N  C+EG+++ 
Sbjct: 189 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 248

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A   L  +   G E +  ++ I++ GLC A   + A   +  M + G   N+  +N ++ 
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 308

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            L + G ++ A+ V E +       +S +Y+ ++H  CK K++  A   L
Sbjct: 309 FLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 211/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    + ++ + +  G  P++VT++ LI   C+   F+  + +  +M E G +PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V  Y ++I G  +   L  +  +L+ M   G+ P+V  YN+L+  L    + +EA  +  
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++ LC+N   D  + +   + +HG +P+++TY  +I G CK G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +L+ +   G  PN ++YT ++K                            G C
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLK----------------------------GLC 438

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +         R  +A + M QM+  G   + V++NTLIN  CK+G +E A  LL +M   
Sbjct: 439 SA-------ERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 491

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAGN   A   L  M K G   N   Y+ I   L  +G+I+  
Sbjct: 492 GCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKV 551

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +FE+++      D+  Y++++ +LCK      A + L   + SG    +S    ++ G
Sbjct: 552 IQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRG 611

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA++I +++
Sbjct: 612 LASEGFVKEAQEILTEL 628



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 193/409 (47%), Gaps = 5/409 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   R+  A A++ D  R G  P    Y++ ++A C+   F     +L  +   G + 
Sbjct: 120 ALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCAL 179

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           DV   N ++        +  ++ LL ++L   G  PDV SYN+++  L    +      +
Sbjct: 180 DVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDL 239

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            ++M+     P   TF+ ++  LC+N   +    +   + +HG  P++  Y  +I G+CK
Sbjct: 240 MEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCK 299

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             RL  AR IL  +   G +PN + Y T++K      +++    +L+ M  K    D   
Sbjct: 300 EERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVT 359

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           +  ++    + G +    + +EQM+  G   D+++Y T+IN +CKEG ++ A +LL  M 
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA 419

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G   +  ++TI++ GLC A     A   +  M + G   N   +N +++ L K G ++
Sbjct: 420 ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479

Query: 375 HAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            AI + + M V     D  +YS+++  L KA     A +LL   +K G+
Sbjct: 480 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 165/380 (43%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+    E+   +       G  PDV  Y  +ID  C+    +    ILNRM   G+SP+
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN+L+ G         +  LL EM +   P D  ++N L+  L Q G  D    V +
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLE 381

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   T+  ++NG CK    D A+ + R +   G  P  V+Y I++KGLC A 
Sbjct: 382 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAE 441

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  ++ ++   G  PN +T+ T++    +    +  +E+L  M   G + D   Y 
Sbjct: 442 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 501

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           TVI    K G   EA + +  MV  G+  + + Y+++ +    EG++     + + ++  
Sbjct: 502 TVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDT 561

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   +  +I  LCK G    A   L YM   G   N   Y  ++  L  +G +  A
Sbjct: 562 TVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 621

Query: 377 INVFESMEVKDSFTYSSMVH 396
             +   +  K +     M H
Sbjct: 622 QEILTELCSKGALRKHLMKH 641



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 175/412 (42%), Gaps = 47/412 (11%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           YN ++  YC+     AG     R       ++P+  TY  L+        ++ +L +LD+
Sbjct: 82  YNAMVAGYCR-----AGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDD 136

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   G  P    Y+  +    +      A  V +D+            N++L  +C    
Sbjct: 137 MARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGP 196

Query: 163 TDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            D A+R+ R L    G  P++V+YN +++GLC A R    + +++E+  +G  PN +T++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    RN  ++   E+ + M   G   D   Y T+I    K  RL+ A   + +M + 
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  ++V YNTL+   C   + E A  LL EM  +    D  T  IL+D LC+       
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQ------- 369

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
                                       +G +D  I V E M     + D  TY+++++ 
Sbjct: 370 ----------------------------NGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            CK   +  A  LL S    G R    +   V+ GL  +    +A+++ S++
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 133/285 (46%), Gaps = 3/285 (1%)

Query: 1   MFGK---LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS 57
           MF K   L     NI V   C+   +++   ++   +  G +PDV+TY  +I+ +C+   
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
            D    +L  M   G  P+ V+Y  ++ G         + +L+ +M++ G PP+  ++N+
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L++ L + G  ++A  + + M+    +P   +++ +++GL K   TD AL +   + K G
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P  + Y+ +   L   GR+     + + + D+    +A+ Y  ++    +  +    +
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAI 587

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           E L+ M   G   +   Y  +I      G +KEA + + ++ + G
Sbjct: 588 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 225/487 (46%), Gaps = 42/487 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI +   CKA +LE A  ++ D ++  G+ P+V+T N+++D  C+    D   +I   + 
Sbjct: 413 NIMIDMLCKAGKLETA-LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 70  EAGISPDVVTYNSLIAGATR---------------------NSLLSCSL----------- 97
                PD VTY SLI G  R                     N+++  SL           
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
               + +EML +G  PD+   N+ M C+F+ G+ ++   +FQ++      P   ++ I++
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GL K  +   A  +F  +++ G V +   YN +I G CK+G++  A  +L+E+   GH 
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P  +TY +++    +  +      +    K KG   +   Y ++I  F K+GR+ EA   
Sbjct: 652 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME+++  G+  ++ ++N L++   K  ++  A +    M+      +  T++ILI GLCK
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCK 771

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
                 A +  + M K GF  N+  Y  ++  L K G I  A  +FE  +    V DS  
Sbjct: 772 IRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y++++  L  A R   A +L       G  I       ++D L  + C  +A  + + +R
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891

Query: 451 -MAKISH 456
             AK  H
Sbjct: 892 ETAKAQH 898



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 221/511 (43%), Gaps = 75/511 (14%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA+RL +A  +     +   +P    YN +I  Y     F+  Y++L R R  G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV+YN +++   R   +  +L   +EM +  IP ++ +YN ++  L + GK + A  
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALV 430

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M    L P   T NIM++ LCK +  D+A  +F GL      P+ VTY  LI+GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           + GR+  A  + +++ D+   PNA+ YT                                
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  +   +K  G+  D   Y  +I   VK G   EA +    M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT-------------- 324
              G  LD  +YNT+I+ +CK GK+  AY LL+EM+ +G E    T              
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 325 ---------------------HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                                ++ LIDG  K G I  A L +E + + G   N+  +NC+
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K  +I  A+  F+SM+      +  TYS ++H LCK ++   A        K G 
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +        ++ GL  +G   EA  +  K +
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 184/421 (43%), Gaps = 41/421 (9%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FG  +   + I V +F K+ +L +A   I    +L   P    Y  LI A       D  
Sbjct: 161 FGPSNNTCIEI-VLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCM 219

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            T+  +M+E G + +V  + +LI    R   +  +L LLDEM    + PDV  YN  + C
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             + GK D A + F +M    L     T+  M+  LCK    + A+ +F  + ++  VP 
Sbjct: 280 FGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              YN +I G   AG+   A  +L+     G  P+ ++Y  I+ C  R            
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK----------- 388

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
                                   G++ EA    E+M  D +  ++ +YN +I++ CK G
Sbjct: 389 ------------------------GQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAG 423

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           KLE A ++ D M+  G   +  T  I++D LCKA  +  A    E ++      +   Y 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++ LG+ G++D A  ++E M    ++ ++  Y+S++ N  K  R     K+    L+ 
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 418 G 418
           G
Sbjct: 544 G 544



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 24/368 (6%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YNSL+    R    +C   +L+EM   G  P   +   ++    +  K  EA    Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                 P  + +  ++  L  +R +D  L +F+ +Q+ G+   +  +  LI+   + GR+
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L E+  +   P+ + Y   + C  +  K  +  +    MK  G   D   Y ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K  RL EA +  E M  +       +YNT+I  Y   GK E AY LL+   ++G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
                ++  ++  L + G +  A    E M K     NL  YN ++D L K GK++ A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 379 VFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           V ++M+    F    T + MV  LCKA+RL  A                    ++ +GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC-------------------SIFEGLD 471

Query: 435 HSGCRREA 442
           H  CR +A
Sbjct: 472 HKTCRPDA 479



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 117/221 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TR  N  +  FCK+ ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +VV Y+SLI G  +   +  +  +++E+++ G+ P+V+++N L+  L +
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +  EA   FQ M     TP   T++I+++GLCK R  + A   ++ +QK GF P + T
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL KAG +  A  + ++  + G   ++  Y  I++
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 203/399 (50%), Gaps = 4/399 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    NI +   CK  +L+KA+  I     LG+ P+VVTYN +I  YC     +    
Sbjct: 188 KSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARM 247

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I + M+  G+ PD  TY S I+G  +   L  +  +L++M E+G+ P   +YN+L+    
Sbjct: 248 IFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYC 307

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  + A      M+   L P  +T+N++++ L  +   D A  + + + + G VP+ V
Sbjct: 308 NKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSV 367

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYNILI G C+ G ++ A  +  E+   G  P  +TYT+++    +  + K   ++   +
Sbjct: 368 TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            RKG   D   +  +I      G +  A   +++M    V  D V++NTL+   C+EGK+
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           EAA  L++EM+ +G + D  ++  LI G  K G++K A    + M  IGF+  L  YN +
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNAL 547

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +  L K+ + DHA  + + M  K    +  TY S++  +
Sbjct: 548 IQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 208/427 (48%), Gaps = 4/427 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K+NR EKA  +  +  R+ +   VVT+N++I+  C+          +  M  
Sbjct: 160 NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEA 219

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+VVTYN++I G      +  +  + D M   G+ PD ++Y S +  + + GK +E
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + + M    L P   T+N +++G C     + A      + + G +P + TYN+LI 
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L    ++  A  I+KE+ + G  P+++TY  ++    R    K    +   M  KG   
Sbjct: 340 ALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y ++I    K GR+K+A D  E++V  G+  D++ +N LI+ +C  G ++ A+ +L
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAML 459

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM++     D+ T   L+ G C+ G ++ AR  +E M   G   +  +YN ++    K 
Sbjct: 460 KEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKR 519

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  A  V + M          TY++++  LCK +    A +LL   +  G+    +  
Sbjct: 520 GDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTY 579

Query: 427 KAVVDGL 433
            ++++G+
Sbjct: 580 LSLIEGI 586



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 204/423 (48%), Gaps = 6/423 (1%)

Query: 33  GIRLGVL--PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN 90
           G+  GVL     V Y++LI A C+    D  +   + M+  G+ P V   N +++   ++
Sbjct: 110 GVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKS 169

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
           +    +  L  EM  M I   V ++N +++ L + GK  +A      M    + P   T+
Sbjct: 170 NRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTY 229

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N +++G C     + A  +F  ++  G  P+  TY   I G+CK G+L  A  +L+++ +
Sbjct: 230 NTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKE 289

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P A+TY T++         ++  +    M R+G       Y  +I A     ++ E
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +++M   G+  D V+YN LIN YC+ G ++ A+ L DEM  +G +  + T+T LI 
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            L K G +K A    E + + G   +L  +N ++D    +G +D A  + + M+    V 
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVP 469

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D  T+++++   C+  ++ +A +L+      G++    +   ++ G    G  ++A +++
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529

Query: 447 SKI 449
            ++
Sbjct: 530 DEM 532



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 82/198 (41%), Gaps = 35/198 (17%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I A  ++ R  +A +  + M   GV   + + N +++L+ K  + E A++L  EM 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +   +    T  I+I+ LCK                                 GK  K  
Sbjct: 184 RMRIKSSVVTFNIMINVLCKE--------------------------------GKLKKAK 211

Query: 375 HAINVFESMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLK-SGVRILKSAQKAVVDG 432
             I + E++ +K +  TY++++H  C   R+  A +++   +K  GV+       + + G
Sbjct: 212 EFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA-RMIFDLMKCRGVKPDSYTYGSFISG 270

Query: 433 LRHSGCRREAKKIQSKIR 450
           +   G   EA  +  K++
Sbjct: 271 MCKEGKLEEASGMLEKMK 288


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 219/444 (49%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   +++A  +    +  G+ PD  TY +L+D +C+         I   M  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G++P+  TY +LI G  +   +  +L + DEM+  G+  +V +YN+++  + + G+  +
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   L P T T+N++++G  K+     A  +   ++     P   TY++LI 
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC +  L+ A  +L ++  +G  PN   Y T++K   +  +Y++ +E+L  M   G   
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  +I    +  +++EA   +  M   G++ +  +Y   INLY K G+++ A    
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G   +   +TILI G C  GN   A    + M + G   ++ AY+ I+  L K+
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639

Query: 371 GKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK   A+ VF    ++  V D F Y+S++   CK   +  AS+L    L +G+       
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY 699

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             +++GL   G   +A+++  +I 
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIE 723



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 214/446 (47%), Gaps = 38/446 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+    N  +    KA  + KA ++  + +  G+ PD  TYN+LID Y +         
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M+   ++P   TY+ LI+G   +S L  + ++LD+M+  G+ P+V+ Y +L+    
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK------------------------ 159
           Q  + + A  + + MI   + P    +N ++ GLC+                        
Sbjct: 498 QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557

Query: 160 ------NRYTDN-----ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
                 N Y+ +     A R F+ +   G VP  V Y ILIKG C  G    A    K +
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            + G  P+   Y+ I+    +N K K  + +     + G   D F Y ++I+ F K G +
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A+   ++M+ +G+  +IV YNTLIN  CK G++  A  L DE+E++    D  T++ +
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 388
           IDG CK+GN+  A    + M   G   +   Y  ++D  GK+G ++ A+++F   + K  
Sbjct: 738 IDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 797

Query: 389 FT---YSSMVHNLCKAKRLPSASKLL 411
            +   ++S++ + CK  ++  A +L 
Sbjct: 798 GSLSAFNSLIDSFCKHGKVIEARELF 823



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 209/442 (47%), Gaps = 23/442 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+A ++E+A+ +++D    G+ P+  TY   I+ Y +             M  
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI P+ V Y  LI G         +L     MLE G+ PD+ +Y++++H L + GK  E
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF   +   + P    +N +++G CK    + A +++  +  +G  P +V YN LI 
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  AR +  E+ +    P+ +TY+TI+    ++       ++   M  KG + 
Sbjct: 705 GLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISP 764

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           DG+ YC +I    K G L++A     +     V   + ++N+LI+ +CK GK+  A  L 
Sbjct: 765 DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELF 823

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIG----FDSNLEAYNCI 363
           D+M  +    +  T+TILID   KA  ++ A    L +E  N I     + S L +YN I
Sbjct: 824 DDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQI 883

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +R          I++F+ ME +    D+  Y  M    CK  +   A KLL   L  G+
Sbjct: 884 GNRF-------KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936

Query: 420 RILKSAQKAVVDGLRHSGCRRE 441
           ++    +  V D L    C+ +
Sbjct: 937 KL----EDDVFDALIFHLCKEK 954



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 208/443 (46%), Gaps = 41/443 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  R ++A+ I       G+ P+  TY  LID + +  + +    I + M   G+  +
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN++I G  +   ++ ++ L +EML  G+ PD W+YN L+    +     +A  +  
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 137 DMICGDLTPCTATFNIMLNGLC------------------------------------KN 160
           +M    LTP   T++++++GLC                                    ++
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           RY + A+ + + +  +G +P+L  YN LI GLC+A ++  A+ +L ++G+ G  PNA TY
Sbjct: 501 RY-EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
              +    ++ + ++       M   G   +   Y  +I     +G   EA    + M+ 
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+  DI +Y+ +I+   K GK + A  +  +  K G   D + +  LI G CK G+I+ 
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A    + M   G + N+  YN +++ L K G++  A  +F+ +E    V D  TYS+++ 
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIID 739

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
             CK+  L  A KL    +  G+
Sbjct: 740 GYCKSGNLTEAFKLFDEMISKGI 762



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 194/413 (46%), Gaps = 5/413 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +   ++PDV TY  +I A+C+      G  +L+ M E    P++ TYN+ I G  +   +
Sbjct: 234 VEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAV 292

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L++   M+E G+ PD  +Y  L+    +  +  EA  +F+ M    L P   T+  +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G  K    + ALR+   +   G    +VTYN +I G+ KAG +  A  +  E+  +G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  TY  ++    ++       E+L+ MK +  T   F Y  +I+       L++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            ++QM+ +GV+ ++  Y TLI  Y +E + E A  LL  M   G   D + +  LI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           +A  ++ A++ L  M + G   N   Y   ++   K G+I  A   F+ M     V ++ 
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            Y+ ++   C       A       L+ G+     A  A++  L  +G  +EA
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 192/408 (47%), Gaps = 5/408 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           ++  +++ ID +      +   ++       G  P ++  N+L+    + +++     + 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M+E  I PDV++Y +++    ++G   +   V  +M   +  P   T+N  + GLC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D AL + + + + G  P+  TY +L+ G CK  R + A+ I + +  SG  PN  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T ++    +    +  L I   M  +G   +   Y  +I    K G + +A     +M+ 
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D  +YN LI+ Y K   +  A  LL EM+ +      +T+++LI GLC + +++ 
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
           A   L+ M + G   N+  Y  ++    ++ + + AI + + M     + D F Y+ ++ 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
            LC+AK++  A  LL+   + G++       A ++    SG  + A++
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 185/380 (48%), Gaps = 7/380 (1%)

Query: 8    RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            R  +  + +  K  + ++A  + +  ++ GV+PDV  YN LI  +C+    +    + + 
Sbjct: 627  RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 68   MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            M   GI+P++V YN+LI G  +   ++ + +L DE+ E  + PDV +Y++++    + G 
Sbjct: 687  MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 128  PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              EA ++F +MI   ++P    + I+++G  K    + AL +F   Q+   V  L  +N 
Sbjct: 747  LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNS 805

Query: 188  LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
            LI   CK G++  AR +  ++ D    PN +TYT ++    +    +   ++   M+ + 
Sbjct: 806  LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 865

Query: 248  YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
               +   Y +++ ++ +IG   +     + M   G+  D ++Y  + + YCKEGK   A 
Sbjct: 866  IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925

Query: 308  LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDR 366
             LL++   +G + +      LI  LCK   I      LE ++++G +  +L +  C    
Sbjct: 926  KLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV---LELLSEMGKEELSLSSKTCNTLL 982

Query: 367  LG--KDGKIDHAINVFESME 384
            LG  K G  D A  V   M+
Sbjct: 983  LGFYKSGNEDEASKVLGVMQ 1002



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 3/346 (0%)

Query: 9    LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            L N  +  FCK   +EKA  +  + +  G+ P++V YN LI+  C+         + + +
Sbjct: 663  LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722

Query: 69   REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             E  + PDVVTY+++I G  ++  L+ +  L DEM+  GI PD + Y  L+    + G  
Sbjct: 723  EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 782

Query: 129  DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            ++A  +F +     +   +A FN +++  CK+     A  +F  +      P +VTY IL
Sbjct: 783  EKALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 841

Query: 189  IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR-NRKYKLGLEILSAMKRKG 247
            I    KA  +  A  +  ++      PN +TYT+++    +   ++K+ + +   M+ +G
Sbjct: 842  IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM-ISLFKDMEARG 900

Query: 248  YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
               D   Y  + +A+ K G+  EA   + + + +G++L+   ++ LI   CKE ++    
Sbjct: 901  IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960

Query: 308  LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
             LL EM K+       T   L+ G  K+GN   A   L  M ++G+
Sbjct: 961  ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGW 1006



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 57/330 (17%)

Query: 182 LVTYNILIKGLCKAGRLRTARWIL---------------------KELGDS--------- 211
           L +Y+IL   LC +G +  A  +L                     +E G S         
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFI 179

Query: 212 ----------------------GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
                                 G  P  I    +M+   +     L  ++  +M      
Sbjct: 180 DKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV 239

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  VI A  K+G + +    + +M  +  + ++ +YN  I   C+ G ++ A  +
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEV 298

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M ++G   D +T+T+L+DG CK    K A+L  E M   G + N   Y  ++D   K
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G I+ A+ + + M  +    +  TY++M+  + KA  +  A  L    L +G+      
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              ++DG   S    +A ++ ++++  K++
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLT 448



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 2/219 (0%)

Query: 3    GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            G LS    N  + +FCK  ++ +A  +  D +   + P++VTY +LIDAY +    +   
Sbjct: 798  GSLSA--FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 855

Query: 63   TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
             +   M    I P+ +TY SL+    +       + L  +M   GI  D  +Y  +    
Sbjct: 856  QLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAY 915

Query: 123  FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             + GK  EA ++    +   +      F+ ++  LCK +     L +   + K       
Sbjct: 916  CKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 975

Query: 183  VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             T N L+ G  K+G    A  +L  +   G  P +++ T
Sbjct: 976  KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 225/487 (46%), Gaps = 42/487 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI +   CKA +LE A  ++ D ++  G+ P+V+T N+++D  C+    D   +I   + 
Sbjct: 413 NIMIDMLCKAGKLETA-LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 70  EAGISPDVVTYNSLIAGATR---------------------NSLLSCSL----------- 97
                PD VTY SLI G  R                     N+++  SL           
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
               + +EML +G  PD+   N+ M C+F+ G+ ++   +FQ++      P   ++ I++
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GL K  +   A  +F  +++ G V +   YN +I G CK+G++  A  +L+E+   GH 
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P  +TY +++    +  +      +    K KG   +   Y ++I  F K+GR+ EA   
Sbjct: 652 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME+++  G+  ++ ++N L++   K  ++  A +    M+      +  T++ILI GLCK
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCK 771

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
                 A +  + M K GF  N+  Y  ++  L K G I  A  +FE  +    V DS  
Sbjct: 772 IRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y++++  L  A R   A +L       G  I       ++D L  + C  +A  + + +R
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891

Query: 451 -MAKISH 456
             AK  H
Sbjct: 892 ETAKAQH 898



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 221/511 (43%), Gaps = 75/511 (14%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA+RL +A  +     +   +P    YN +I  Y     F+  Y++L R R  G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV+YN +++   R   +  +L   +EM +  IP ++ +YN ++  L + GK + A  
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALV 430

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M    L P   T NIM++ LCK +  D+A  +F GL      P+ VTY  LI+GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           + GR+  A  + +++ D+   PNA+ YT                                
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  +   +K  G+  D   Y  +I   VK G   EA +    M
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT-------------- 324
              G  LD  +YNT+I+ +CK GK+  AY LL+EM+ +G E    T              
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 325 ---------------------HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                                ++ LIDG  K G I  A L +E + + G   N+  +NC+
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K  +I  A+  F+SM+      +  TYS ++H LCK ++   A        K G 
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +        ++ GL  +G   EA  +  K +
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 184/421 (43%), Gaps = 41/421 (9%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FG  +   + I V +F K+ +L +A   I    +L   P    Y  LI A       D  
Sbjct: 161 FGPSNNTCIEI-VLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCM 219

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            T+  +M+E G + +V  + +LI    R   +  +L LLDEM    + PDV  YN  + C
Sbjct: 220 LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDC 279

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             + GK D A + F +M    L     T+  M+  LCK    + A+ +F  + ++  VP 
Sbjct: 280 FGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              YN +I G   AG+   A  +L+     G  P+ ++Y  I+ C  R            
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK----------- 388

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
                                   G++ EA    E+M  D +  ++ +YN +I++ CK G
Sbjct: 389 ------------------------GQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAG 423

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           KLE A ++ D M+  G   +  T  I++D LCKA  +  A    E ++      +   Y 
Sbjct: 424 KLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYC 483

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++ LG+ G++D A  ++E M    ++ ++  Y+S++ N  K  R     K+    L+ 
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 418 G 418
           G
Sbjct: 544 G 544



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 24/368 (6%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YNSL+    R    +C   +L+EM   G  P   +   ++    +  K  EA    Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                 P  + +  ++  L  +R +D  L +F+ +Q+ G+   +  +  LI+   + GR+
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L E+  +   P+ + Y   + C  +  K  +  +    MK  G   D   Y ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K  RL EA +  E M  +       +YNT+I  Y   GK E AY LL+   ++G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
                ++  ++  L + G +  A    E M K     NL  YN ++D L K GK++ A+ 
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 379 VFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           V ++M+    F    T + MV  LCKA+RL  A                    ++ +GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC-------------------SIFEGLD 471

Query: 435 HSGCRREA 442
           H  CR +A
Sbjct: 472 HKTCRPDA 479



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 117/221 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TR  N  +  FCK+ ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +VV Y+SLI G  +   +  +  +++E+++ G+ P+V+++N L+  L +
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +  EA   FQ M     TP   T++I+++GLCK R  + A   ++ +QK GF P + T
Sbjct: 737 AEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT 796

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL KAG +  A  + ++  + G   ++  Y  I++
Sbjct: 797 YTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 214/445 (48%), Gaps = 39/445 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVV+Y  +I+ + +    D  Y   + M + GI P+VVTY+S+IA   +   +  ++++
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  M++ G+ P+  +YNS++H     G+P EA    + M    + P   T+N +++ LCK
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N     A +MF  + K G  PE+ TY  L++G    G L     +L  +  +G  PN   
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           ++ ++    +  K    + + S M+++G   D   Y TVI    K GR+++A  Y EQM+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 280 TD-----------------------------------GVQLDIVSYNTLINLYCKEGKLE 304
            +                                   G+ LD + +N++I+ +CKEG++ 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +  L D M + G + D  T++ LIDG C AG +  A   L  M  +G   +   YN ++
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +   K  +++ A+ +F  ME      D  TY+ ++  L + +R  +A +L +   +SG +
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
           +  S    ++ GL  +    EA ++
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRM 641



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 209/436 (47%), Gaps = 4/436 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA  ++KA  ++   ++ GV+P+  TYN ++  YC           L +M   G+
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYNSL+    +N   + +  + D M + G+ P++ +Y +L+      G   E + 
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    F+I++    K    D A+ +F  +++ G  P+ VTY  +I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+GR+  A    +++ D   +P  I Y +++       K+    E++  M  +G   D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ DI++Y+TLI+ YC  GK++ A  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G CK   ++ A +    M   G   ++  YN I+  L +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 DHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A    + + ES    +  TY+ ++H LCK      A ++  +   + +++       +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 430 VDGLRHSGCRREAKKI 445
           +  L   G   EAK +
Sbjct: 661 IGALLKVGRNDEAKDL 676



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 215/435 (49%), Gaps = 7/435 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C A RL+   A + + I+ G + D + +  ++   C    + DA   +L RM + G  P+
Sbjct: 102 CCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPN 161

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V +YN L+ G   ++    +L+LL  M + G   PPDV SY ++++  F+ G  D+A   
Sbjct: 162 VFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           + +M+   + P   T++ ++  LCK +  D A+ +   + K+G +P   TYN ++ G C 
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           +G+ + A   LK++   G  P+ +TY ++M    +N +     ++  +M ++G   +   
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++  +   G L E    ++ MV +G+  +   ++ LI  Y K+GK++ A L+  +M 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +QG   D  T+  +I  LCK+G ++ A  + E M           YN ++  L    K D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWD 461

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  +   M  +    D+  ++S++ + CK  R+  + KL    ++ GV+        ++
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 431 DGLRHSGCRREAKKI 445
           DG   +G   EA K+
Sbjct: 522 DGYCLAGKMDEATKL 536



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 196/418 (46%), Gaps = 12/418 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P++ TY +L+ + C     D G+  L  + + G   D + +  ++ G   +   S ++
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 154
           D+ L  M ++G  P+V+SYN L+  L    +  EA  + Q M    GD  P   ++  ++
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG  K    D A   +  +   G +P +VTY+ +I  LCKA  +  A  +L  +  +G  
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TY +I+     + + K  +  L  M   G   D   Y +++    K GR  EA   
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   + Y  +ILI    K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G +  A L    M + G + +   Y  ++  L K G+++ A+  FE M        +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           Y+S++H+LC   +   A +L+L  L  G+ +      +++D    S C +E + I+S+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID----SHC-KEGRVIESE 499



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  + + CK  R+ ++E +    +R+GV PD++TY+ LID YC     D    +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD VTYN+LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +   L  +G  P+  TY+ + +        +   ++  +M+
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T +     +++   ++ G +  A  Y+  +      L+  + +  ++L    GK +
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL-SGGKYQ 775

Query: 305 AAYLLLDEMEKQGFE 319
             +  L E  K   E
Sbjct: 776 EYHRFLPEKYKSFIE 790



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 169/368 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C + K  ++++A  +     + G+ PD VTY  +I   C+    +       +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  +SP  + YNSLI           + +L+ EML+ GI  D   +NS++    + G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTYN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + +E+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+ + A  
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D  T++++ + L + G ++        M + G  +N    N IV +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 736 QRGDITRA 743



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 9/366 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + LN    T+       CK+ R+E A       I   + P  + YN LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F  +D    ++  M + GI  D + +NS+I    +   +  S  L D M+ +G+ PD+ 
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y++L+      GK DEA ++   M+   + P   T+N ++NG CK    ++AL +FR +
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P+++TYNI+++GL +  R   A+ +   + +SG      TY  I+    +N   
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +   +       +   +  +I A +K+GR  EA D    +  +G+  D+ +Y+ +
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
                ++G LE    L   ME+ G   +      ++  L + G+I  A  +L  +++  F
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 354 DSNLEA 359
             +LEA
Sbjct: 756 --SLEA 759



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 43/371 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+   +++LI AY +    D    + ++MR+ G++PD VTY ++I    ++  +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++  + P    YNSL+H L    K D+A  +  +M+   +   T  FN +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P+++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY T++                             GYC       KI R+++A  
Sbjct: 546 KPDCVTYNTLIN----------------------------GYC-------KISRMEDALV 570

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K  N+    L + + N    D  LE   +N ++  L K G+ D A ++F ++     V D
Sbjct: 631 K-NNLTDEALRM-FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 388 SFTYSSMVHNL 398
             TYS M  NL
Sbjct: 689 VRTYSLMAENL 699



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 9/330 (2%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
           + DE+L  G    ++  N  +  + +       +R  +    G  ++TP   T+ I++  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGS 100

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
            C     D        + K GF+ + + +  ++KGLC   R   A   +L+ +   G  P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEATD 273
           N  +Y  ++K    + + +  LE+L  M   G     D   Y TVI  F K G L +A  
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M+  G+  ++V+Y+++I   CK   ++ A  +L  M K G   +  T+  ++ G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
            +G  K A   L+ M+  G + ++  YN ++D L K+G+   A  +F+SM  +    +  
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY +++        L     LL   +++G+
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGI 370


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 215/426 (50%), Gaps = 11/426 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+N++ KA  ++   I  G  PD  +   L++  C+  +      ++ +M E G   +
Sbjct: 107 LCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTN 166

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYNSL+ G   +  LS SL +LD+ ++ G+ P+V++Y+ L+   ++    DEA R+  
Sbjct: 167 TVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLD 226

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +++     P   ++N++L GLCK   T+ A++ FR L   GF P +V+YNIL++ LC  G
Sbjct: 227 EIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEG 286

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A+ +L E+     +P+ +T+  ++     + +    LE+L  M R  +      Y 
Sbjct: 287 RWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYN 346

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +IA   K G++      ++QM+      +  +YN  I + C+EGK++ A+ ++  +   
Sbjct: 347 PIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA-IAVLCEEGKVQEAFSIIQSL--- 402

Query: 317 GFECDKYTHTI---LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           G + +  TH     +I  LC+ GN   A   L  M K GF  +   Y+ ++  L  +G +
Sbjct: 403 GNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGML 462

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A+ +F  ME      D   +++++  LCK ++   +  +    +K G    ++    +
Sbjct: 463 DEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTII 522

Query: 430 VDGLRH 435
           V+G+ H
Sbjct: 523 VEGIAH 528



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 15/395 (3%)

Query: 56  VSFDAGYTILNRMREAGISP--DVVTYNSLIAGA----TRNSLLSCSLDLLDEMLEMGIP 109
           +S + G++ +    +  ISP  +V T  +  +G     TR+  L+ +   L+ M+  G  
Sbjct: 35  LSLNKGFSRVLASTQITISPKDNVFTLPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHK 94

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           PD      LM+ L +  K  +A +V + MI    TP  A+   ++N LCK      A+++
Sbjct: 95  PDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQL 154

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
              ++++G+    VTYN L++GLC  G L  +  IL +    G  PN  TY+ +++  ++
Sbjct: 155 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYK 214

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            R     + +L  +  KG   +   Y  ++    K GR +EA  +   + + G   ++VS
Sbjct: 215 ERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVS 274

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           YN L+   C EG+ E A  LL EM+         T  ILI  L   G    A   L+ M+
Sbjct: 275 YNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMS 334

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
           +  F +   +YN I+ RL K+GK+D  +   + M  +    +  TY++ +  LC+  ++ 
Sbjct: 335 RARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA-IAVLCEEGKVQ 393

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            A     S ++S      S+      G+  S CR+
Sbjct: 394 EA----FSIIQSLGNKQNSSTHDFYKGVISSLCRK 424



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 175/389 (44%), Gaps = 1/389 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++  I+   ++ G++P+V TY+ L++A  +    D    +L
Sbjct: 166 NTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLL 225

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++    ++   G  P+V SYN L+  L   
Sbjct: 226 DEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYE 285

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ ++A  +  +M  G+ +P   TFNI++  L  +  TD AL +   + +  F     +Y
Sbjct: 286 GRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASY 345

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LCK G++      L ++      PN  TY  I   C    K +    I+ ++  
Sbjct: 346 NPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLC-EEGKVQEAFSIIQSLGN 404

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K  +     Y  VI++  + G    A   + +M   G   D  +Y++LI   C EG L+ 
Sbjct: 405 KQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDE 464

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +   ME+     D      LI GLCK      + +  E M K G+  N   Y  IV+
Sbjct: 465 AMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVE 524

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            +    +++ A  V + + ++ +   S++
Sbjct: 525 GIAHQEEMELAAAVLKELYLRQAVGRSTL 553



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 34/310 (10%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    N+ +   CK  R E+A     D    G  P+VV+YN+L+ + C    ++   
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAK 292

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L  M     SP +VT+N LI     +     +L++LD+M          SYN ++  L
Sbjct: 293 ELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARL 352

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIM----------------------------- 153
            + GK D   +    M+     P   T+N +                             
Sbjct: 353 CKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHD 412

Query: 154 -----LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
                ++ LC+   T  A ++   + K+GFVP+  TY+ LI+GLC  G L  A  I   +
Sbjct: 413 FYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIM 472

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            ++   P+   +  ++    + RK  L L +   M +KGY  +   Y  ++        +
Sbjct: 473 EENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEM 532

Query: 269 KEATDYMEQM 278
           + A   ++++
Sbjct: 533 ELAAAVLKEL 542


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 208/412 (50%), Gaps = 10/412 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I     C  NR+ +A A +   +R G +P+VVTY  LI   C          +  RM+
Sbjct: 129 LSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQ 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML----EMGI--PPDVWSYNSLMHCLF 123
           + G +P+ VTY +LI G  +   ++ +L L  EML    + G+   P V +Y+ ++  L 
Sbjct: 189 KLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLC 248

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+ DEA  +F++M    + P   +++ +++G C     D +  +F  +   G  P++V
Sbjct: 249 KVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMV 308

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+++LI  LCK G++  A+ +L+ +   G  PN ITY +++             E+  +M
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D   Y T+I  + K  ++KEA +   +M+  G   ++ +Y TL+    ++GK+
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L   M+  G   +   + I +DGLCK   +  A      +    F  N+E Y+C+
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +D L K GK++ A  +FE +  +    D  TY+ M+H  CK  ++ +A+ L 
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 217/438 (49%), Gaps = 14/438 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF----VSFDAGYTILNRMREAG 72
            C  +R+ +A  + +   +LG  P+ VTY  LI   CQ     ++      +LN   + G
Sbjct: 171 LCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYG 230

Query: 73  IS--PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           ++  P V+TY+ +I G  +      + +L +EM   G+ PDV SY++L+H     GK D+
Sbjct: 231 VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQ 290

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +  +F +M+   + P   TF+++++ LCK      A ++   + + G VP L+TYN LI 
Sbjct: 291 SKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLID 350

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  G L +AR +   +   G  P+ I+YTT++    +  K K  + + + M + G + 
Sbjct: 351 GFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T++    + G++ +A      M T GV  +   Y   ++  CK   L  A  L 
Sbjct: 411 NVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELF 470

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E++   F+ +   ++ LIDGLCKAG ++ A    E +++ G   ++  YN ++    K 
Sbjct: 471 NELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKV 530

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G++D+A  +FE ME      D   Y++++   C+  +L    KLL   ++  V    ++ 
Sbjct: 531 GQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASC 590

Query: 427 KAVVDGLRHSGCRREAKK 444
             VVD L    C+ E  K
Sbjct: 591 TIVVDML----CKDEKYK 604



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 189/376 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  R ++A+ +  +    G++PDV++Y+ LI  +C    +D    + + M +
Sbjct: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD 300

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+VT++ LI    +   ++ +  LL+ M++ GI P++ +YNSL+     +G  + 
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNS 360

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    L P   ++  ++NG CK      A+ ++  + + G  P + TY  L+K
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G++  A+ +   +   G + N+  Y   +    +N      +E+ + +K   +  
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL 480

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K G+L+ A +  E++  +G+Q D+V+YN +I+ +CK G+++ A +L 
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILF 540

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++ME+ G   D   +  L+ G C+   ++     L  M +     N  +   +VD L KD
Sbjct: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKD 600

Query: 371 GKIDHAINVFESMEVK 386
            K    +++     V+
Sbjct: 601 EKYKKFVDLLPKFPVQ 616



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 179/370 (48%), Gaps = 10/370 (2%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +    D M+     P + S+N L+  L ++    +   ++ +M    L+P   T +I+ N
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC       AL    G+ + G++P +VTY  LIKGLC   R+  A  +   +   G  P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 216 NAITYTTIMKCCFR----NRKYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLK 269
           NA+TY T++K   +    N   KL  E+L+   + G         Y  +I    K+GR  
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA +  E+M   G+  D++SY+TLI+ +C  GK + +  L DEM  QG + D  T ++LI
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           D LCK G +  A+  LE M + G   NL  YN ++D     G ++ A  +F SM  K   
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  +Y+++++  CK  ++  A  L    L+ G     +    ++ GL   G   +AKK+
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434

Query: 446 QSKIRMAKIS 455
              ++   +S
Sbjct: 435 FGVMKTYGVS 444



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 188/393 (47%), Gaps = 11/393 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MR   I P + ++N L+ G  + +  S    L +EM   G+ PD+++ + L +CL  + +
Sbjct: 83  MRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA      ++     P   T+  ++ GLC       A R+F  +QK G  P  VTY  
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 188 LIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIMKCCFRNRKYKLGLEILS 241
           LIKGLC+ G +  A  + KE L D+        P  ITY+ I+    +  +     E+  
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            MK +G   D   Y T+I  F   G+  ++    ++MV  GVQ D+V+++ LI+  CKEG
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+  A  LL+ M ++G   +  T+  LIDG C  G++  AR     M   G + +  +Y 
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +++   K  K+  A+N++  M    +  +  TY +++  L +  ++  A KL       
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           GV          +DGL  + C  EA ++ ++++
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 213/440 (48%), Gaps = 4/440 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L I + +FC  NR++ A +++   ++LG  PD  T+  L+   C          + ++M 
Sbjct: 94  LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+VVTY +L+ G  ++  L+ +L+L  EM+  GI PD+++YNSL+H L  L +  
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               +  +M+   + P   + NI+++ LCK      A  +   + + G  P++VTY  L+
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A  +   +  +G   N ++Y T++    + ++    + +   M R+   
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I     +GRL++A     +MV  G   ++V+Y+ L++  CK  +L  A  L
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  +E    + D   + I IDG+C+AG+++ AR     +   G   ++  +N ++  L K
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A  +F  M+    +++  TY+++   L +  +   A +LL   L  G     S 
Sbjct: 454 RGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVST 513

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              +V  L   G  +  K+I
Sbjct: 514 TALLVKMLSDDGLDQSVKQI 533



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 202/393 (51%), Gaps = 11/393 (2%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T  ++I+++C     D   ++L ++ + G  PD  T+ +L+ G      +  
Sbjct: 85  FGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGE 144

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +LD+ D+M+  G  P+V +Y +LM+ L +  +  EA  +F +MI   ++P   T+N +++
Sbjct: 145 ALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIH 204

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC      +   +   + K   +P +V+ NI++  LCK G++  A  ++  +   G  P
Sbjct: 205 ALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEP 264

Query: 216 NAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           + +TY  +M   C R+   +  +++   M R G   +   Y T+I  + KI R+ +A   
Sbjct: 265 DVVTYAALMDGHCLRSEMDE-AVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E+M    +  + ++Y+TLI+  C  G+L+ A  L +EM   G   +  T++IL+D LCK
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK 383

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
              +  A   L+ +     D +++ YN  +D + + G ++ A ++F ++  +    D +T
Sbjct: 384 NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWT 443

Query: 391 YSSMVHNLCKAKRLPSASKLLLS-----CLKSG 418
           ++ M+  LCK   L  ASKL        CL++G
Sbjct: 444 HNIMIRGLCKRGLLDEASKLFREMDENGCLRNG 476



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 4/429 (0%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L+ A +     + +   P +  +  L+ +  +   +    ++  +M   GI PDV T 
Sbjct: 35  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
             +I      + +  +L +L ++L++G  PD  ++ +L+  L  +GK  EA  VF  M+ 
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P   T+  ++NGLCK+R    AL +F  +   G  P++ TYN LI  LC     + 
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              +L E+  S   PN ++   ++    +  K     +++  M + G   D   Y  ++ 
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                  + EA    + MV +G   ++VSYNTLIN YCK  +++ A  L +EM +Q    
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  T++ LI GLC  G ++ A      M   G   NL  Y+ ++D L K+ ++  A+ + 
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394

Query: 381 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           +++E      D   Y+  +  +C+A  L +A  L  +    G++        ++ GL   
Sbjct: 395 KAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454

Query: 437 GCRREAKKI 445
           G   EA K+
Sbjct: 455 GLLDEASKL 463



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 183/400 (45%), Gaps = 4/400 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F + D   +  +RM      P +  +  L+    +    S  L L  +M   GIPPDV+
Sbjct: 33  HFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVY 92

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +   +++    L + D A  V   ++     P TATF  ++ GLC       AL +F  +
Sbjct: 93  TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              GF P +VTY  L+ GLCK  +L  A  +  E+   G +P+  TY +++       ++
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           K    +L+ M +     +      V+ A  K G++ EA D ++ M+  GV+ D+V+Y  L
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++ +C   +++ A  + D M + G  C+  ++  LI+G CK   I  A    E M +   
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 409
             N   Y+ ++  L   G++  AI +F  M    ++ +  TYS ++  LCK  RL  A  
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMA 392

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           LL +   S +          +DG+  +G    A+ + S +
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   RL+ A A+  + +  G +P++VTY++L+D  C+         +L  +  + + PD
Sbjct: 346 LCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPD 405

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V  YN  I G  R   L  + DL   +   G+ PDVW++N ++  L + G  DEA+++F+
Sbjct: 406 VQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFR 465

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M          T+N +  GL +N  T  A+++   +   GF  ++ T  +L+K L   G
Sbjct: 466 EMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525

Query: 197 RLRTARWILKEL 208
             ++ + IL E 
Sbjct: 526 LDQSVKQILCEF 537



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++ NI +   C+A  LE A  +  +    G+ PDV T+N++I   C+    D    +   
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           M E G   +  TYN++  G  +N+  S ++ LL+EML  G   DV
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADV 511


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 227/478 (47%), Gaps = 45/478 (9%)

Query: 11  NICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +   C  NR ++A    + +  DG      PDVV+Y  +I+ + +    D  Y   +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGG--DCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + GI P+VVTY+S+IA   +   +  ++++L  M++ G+ P+  +YNS++H     G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P EA    + M    + P   T+N +++ LCKN     A +MF  + K G  PE+ TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L++G    G L     +L  +  +G  PN   ++ ++    +  K    + + S M+++
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------------------------- 281
           G   D   Y TVI    K GR+++A  Y EQM+ +                         
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 282 ----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                     G+ LD + +N++I+ +CKEG++  +  L D M + G + D  T++ LIDG
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            C AG +  A   L  M  +G   +   YN +++   K  +++ A+ +F  ME      D
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             TY+ ++  L + +R  +A +L +   +SG ++  S    ++ GL  +    EA ++
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 209/436 (47%), Gaps = 4/436 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA  ++KA  ++   ++ GV+P+  TYN ++  YC           L +M   G+
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYNSL+    +N   + +  + D M + G+ P++ +Y +L+      G   E + 
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    F+I++    K    D A+ +F  +++ G  P+ VTY  +I  LC
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+GR+  A    +++ D   +P  I Y +++       K+    E++  M  +G   D  
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ DI++Y+TLI+ YC  GK++ A  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G CK   ++ A +    M   G   ++  YN I+  L +  + 
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 374 DHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A    + + ES    +  TY+ ++H LCK      A ++  +   + +++       +
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 430 VDGLRHSGCRREAKKI 445
           +  L   G   EAK +
Sbjct: 661 IGALLKVGRNDEAKDL 676



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 216/441 (48%), Gaps = 7/441 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMRE 70
           I + + C A RL+   A + + I+ G   D + +  L+   C    + DA   +L RM +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKP 128
            G  P+V +YN L+ G    +    +L+LL  M + G   PPDV SY ++++  F+ G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   + +M+   + P   T++ ++  LCK +  D A+ +   + K+G +P   TYN +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G C +G+ + A   LK++   G  P+ +TY ++M    +N +     ++  +M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T++  +   G L E    ++ MV +G+  +   ++ LI  Y K+GK++ A L
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +M +QG   D  T+  +I  LCK+G ++ A  + E M           YN ++  L 
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              K D A  +   M  +    D+  ++S++ + CK  R+  + KL    ++ GV+    
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++DG   +G   EA K+
Sbjct: 516 TYSTLIDGYCLAGKMDEATKL 536



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 182/389 (46%), Gaps = 7/389 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P++ TY +LI + C     D G+  L  + + G   D + +  L+ G   +   S ++
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 154
           D+ L  M ++G  P+V+SYN L+  L    +  EA  + Q M    GD  P   ++  ++
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG  K    D A   +  +   G +P +VTY+ +I  LCKA  +  A  +L  +  +G  
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TY +I+     + + K  +  L  M   G   D   Y +++    K GR  EA   
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   + Y  +ILI    K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G +  A L    M + G + +   Y  ++  L K G+++ A+  FE M        +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           Y+S++H+LC   +   A +L+L  L  G+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 10/360 (2%)

Query: 60  AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           A  +  NRM  AG   ++P++ TY  LI        L      L  +++ G   D  ++ 
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 117 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            L+  L    +  +A + V + M      P   ++NI+L GLC    +  AL + + +  
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 176 HGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            G    P++V+Y  +I G  K G L  A     E+ D G  PN +TY++I+    + +  
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L++M + G   +   Y +++  +   G+ KEA  ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK G+   A  + D M K+G + +  T+  L+ G    G +      L+ M + G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             N   ++ ++    K GK+D A+ VF  M  +    D+ TY +++  LCK+ R+  A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  + + CK  R+ ++E +    +R+GV PD++TY+ LID YC     D    +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD VTYN+LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +   L  +G  P+  TY+ + +        +   ++  +M+
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             G T +     +++   ++ G +  A  Y+
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 169/368 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C + K  ++++A  +     + G+ PD VTY  +I   C+    +       +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  +SP  + YNSLI           + +L+ EML+ GI  D   +NS++    + G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTYN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + +E+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+ + A  
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D  T++++ + L + G ++        M + G  +N    N IV +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 736 QRGDITRA 743



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 9/366 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + LN    T+       CK+ R+E A       I   + P  + YN LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F  +D    ++  M + GI  D + +NS+I    +   +  S  L D M+ +G+ PD+ 
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y++L+      GK DEA ++   M+   + P   T+N ++NG CK    ++AL +FR +
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P+++TYNI+++GL +  R   A+ +   + +SG      TY  I+    +N   
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +   +       +   +  +I A +K+GR  EA D    +  +G+  D+ +Y+ +
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
                ++G LE    L   ME+ G   +      ++  L + G+I  A  +L  +++  F
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 354 DSNLEA 359
             +LEA
Sbjct: 756 --SLEA 759



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 43/371 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+   +++LI AY +    D    + ++MR+ G++PD VTY ++I    ++  +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++  + P    YNSL+H L    K D+A  +  +M+   +   T  FN +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P+++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY T++                             GYC       KI R+++A  
Sbjct: 546 KPDCVTYNTLIN----------------------------GYC-------KISRMEDALV 570

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K  N+    L + + N    D  LE   +N ++  L K G+ D A ++F ++     V D
Sbjct: 631 K-NNLTDEALRM-FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 388 SFTYSSMVHNL 398
             TYS M  NL
Sbjct: 689 VRTYSLMAENL 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 7/291 (2%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
           + DE+L  G    ++  N  +  + +       +R  +    G  ++TP   T+ I++  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
            C     D        + K GF  + + +  L+KGLC   R   A   +L+ +   G  P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 272
           N  +Y  ++K  C  NR  +  LE+L  M   G     D   Y TVI  F K G L +A 
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +M+  G+  ++V+Y+++I   CK   ++ A  +L  M K G   +  T+  ++ G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           C +G  K A   L+ M+  G + ++  YN ++D L K+G+   A  +F+SM
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 48/257 (18%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINL 296
           +   + R+G     +G    +A   +       + Y  M +   D V  ++ +Y  LI  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 355
            C  G+L+  +  L  + K+GF  D    T L+ GLC       A  + L  M ++G   
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 356 NLEAYN-------------------------------------CIVDRLGKDGKIDHAIN 378
           N+ +YN                                      +++   K+G +D A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
            +  M     + +  TYSS++  LCKA+ +  A ++L S +K+GV        ++V G  
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 435 HSGCRREA----KKIQS 447
            SG  +EA    KK+ S
Sbjct: 281 SSGQPKEAIGFLKKMHS 297


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 212/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P  +TY  ++D  C+     +   +L +M E   I P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I    ++   S + +L  EM E GI PD+++YNS++      G+  +A ++ 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TYN +I G CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +P+  T+TT++      ++   G+E+L  M R+G   +   Y
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 433

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D  +QM++ GV  DIV+ NTL++  C  GKL+ A  +   M+K
Sbjct: 434 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 614 ADAIIYITLIYGFRKVG 630



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 194/412 (47%), Gaps = 17/412 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R   A+ +  +    G+ PD+ TYN +I  +C    +     +L  M E  ISP
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI    +      + +L DEML  GI P+  +YNS++    +  + D A  +F
Sbjct: 324 DVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 383

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M     +P   TF  +++G C  +  D+ + +   + + G V   VTYN LI G C  
Sbjct: 384 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 443

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK--------- 246
           G L  A  + +++  SG  P+ +T  T++     N K K  LE+  AM++          
Sbjct: 444 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 503

Query: 247 --GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y  +I   +  G+  EA +  E+M   G+  D ++Y+++I+  CK+ +L+
Sbjct: 504 FNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCI 363
            A  +   M  + F  +  T   LI+G CKAG +  G  L  E M + G  ++   Y  +
Sbjct: 564 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE-MGRRGIVADAIIYITL 622

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G I+ A+++F+ M       D+ T  +M+      + L  A  +L
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 674



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 204/455 (44%), Gaps = 51/455 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC  ++L  A +      +LG+ PDVVT+  L+   C            ++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT+ +L+ G  R   +  ++ LLD M+E G+ P   +Y +++  + + G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++ LCK+    +A  +F  +Q+ G  P+L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A  +L+E+ +   +P+ +TY  ++    +  K+    E+   M  +G 
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A D    M T G   D+ ++ TLI+ YC   +++    
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 416

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL EM ++G   +  T+  LI G C  G++  A    + M   G   ++   N ++D L 
Sbjct: 417 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476

Query: 369 KDGKIDHAINVFESME-------------------------------------------- 384
            +GK+  A+ +F++M+                                            
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 536

Query: 385 ------VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
                 V D+ TYSSM+  LCK  RL  A+++ +S
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 207/443 (46%), Gaps = 5/443 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP VV +  L+    +    D   ++  +M    I  D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++N LI      S L  +L    ++ ++G+ PDV ++ +L+H L    +  EA   F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+    ++ ++     + + M+ KG   D F Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F   GR  +A   +++M+   +  D+V+YN LIN + KEGK   A  L DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T+  +IDG CK   +  A      M   G   ++  +  ++D      +ID 
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            + +   M     V ++ TY++++H  C    L +A  L    + SGV         ++D
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 432 GLRHSGCRREAKKIQSKIRMAKI 454
           GL  +G  ++A ++   ++ +K+
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKM 496



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 11/342 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC + R   AE ++ + +   + PDVVTYN LI+A+ +   F     + + M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+ +TYNS+I G  +   L  + D+   M   G  PDV+++ +L+       + D+
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M    L   T T+N +++G C     + AL + + +   G  P++VT N L+ 
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 191 GLCKAGRLRTARWILKELGDS-----------GHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           GLC  G+L+ A  + K +  S           G  P+ +TY  ++       K+    E+
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  +G   D   Y ++I    K  RL EAT     M +     ++V++NTLIN YCK
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 593

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            G+++    L  EM ++G   D   +  LI G  K GNI GA
Sbjct: 594 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 11/309 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK +RL+ AE +       G  PDV T+  LID YC     D G  +L+ M   G+  +
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L+ +LDL  +M+  G+ PD+ + N+L+  L   GK  +A  +F+
Sbjct: 430 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 489

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI++ GL        A  ++  +   G VP+ +TY
Sbjct: 490 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+ T++    +  +   GLE+   M R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D   Y T+I  F K+G +  A D  ++M++ GV  D ++   ++  +  + +LE 
Sbjct: 610 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 669

Query: 306 AYLLLDEME 314
           A  +L++++
Sbjct: 670 AVAMLEDLQ 678



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    M+       +V +  L+ +  +  + +    L  +ME++   
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN- 378
           CD Y+  ILI   C    +  A      + K+G   ++  +  ++  L  + ++  A++ 
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 379 ---VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
              +FE+    +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 436 SGCRREAKKIQSKIRMAKISH 456
            G    A  +  K  M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 222/436 (50%), Gaps = 8/436 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + ++ G   D +T+  L+   C    + DA   +L RM E G  PD
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPD 162

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +YN+L+ G    +    +L+LL  M +    G PPDV SYN++++  F+ G  D+A  
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   + P   T++ ++  LCK +  D A+ +   + K+G +P+ +TYN ++ G C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G+ + A   LK++   G  PN +TY+++M    +N +     +I  +M ++G   D  
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++  +   G L E    ++ MV +G+Q D   +N LI  Y K+ K++ A L+  +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G   +   +  +ID LCK+G++  A L+ E M   G   N+  Y  ++  L    K 
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +   M  +    ++  ++S++ + CK  R+  + KL    ++ GV+        +
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 430 VDGLRHSGCRREAKKI 445
           +DG   +G   EA K+
Sbjct: 523 IDGCCLAGKMDEATKL 538



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 213/440 (48%), Gaps = 7/440 (1%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            C  NR ++A  ++    D    G  PDVV+YN +++ + +    D  Y+  + M + GI
Sbjct: 173 LCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGI 232

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTY+S+IA   +   +  ++++L+ M++ G+ PD  +YNS++H     G+P EA  
Sbjct: 233 LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG 292

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             + M    + P   T++ ++N LCKN  +  A ++F  + K G  P++ TY  L++G  
Sbjct: 293 TLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA 352

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L     +L  +  +G  P+   +  ++    +  K    + + S M++ G   +  
Sbjct: 353 TKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVV 412

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y TVI    K G + +A  Y EQM+ +G+  +I+ Y +LI+  C   K + A  L+ EM
Sbjct: 413 CYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G   +      +ID  CK G +  +    + M +IG   ++  YN ++D     GK+
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +  SM       D  TY ++++  C+  R+  A  L    + SGV         +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           + GL H+     AK++   I
Sbjct: 593 LQGLFHTRRTAAAKELYVSI 612



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 4/391 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA  ++KA  ++   ++ GV+PD +TYN ++  YC           L +MR  G+
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY+SL+    +N   + +  + D M + G+ PD+ +Y +L+      G   E + 
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    FNI++    K    D A+ +F  +++HG  P +V Y  +I  LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+G +  A    +++ D G  PN I YT+++       K+    E++  M  +G   +  
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ DI++YNTLI+  C  GK++ A  LL  M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G C+   +  A    + M   G   N+  YN I+  L    + 
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 374 DHAINVFESMEVKDS----FTYSSMVHNLCK 400
             A  ++ S+    +     TY+ ++H LCK
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCK 633



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 187/391 (47%), Gaps = 10/391 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P V TY +LI   C+    D G+  L  + + G   D +T+  L+ G   +   S ++
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIM 153
           D+ L  M E+G  PDV+SYN+L+  L    +  EA  +   M     G   P   ++N +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           LNG  K   +D A   +  +   G +P++VTY+ +I  LCKA  +  A  +L  +  +G 
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY +I+     + + K  +  L  M+  G   +   Y +++    K GR  EA  
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             + M   G++ DI +Y TL+  Y  +G L   + LLD M + G + D +   ILI    
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT--- 390
           K   +  A L    M + G + N+  Y  ++D L K G +D A+  FE M + +  T   
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM-IDEGLTPNI 446

Query: 391 --YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             Y+S++H LC   +   A +L+L  L  G+
Sbjct: 447 IVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 176/368 (47%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +C + K  ++++A  +     + G+ P+VV Y  +ID  C+  S D       +M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G++P+++ Y SLI G         + +L+ EML+ GI  +   +NS++    + G+ 
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T+N +++G C     D A ++   +   G  P++VTY  L
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C+  R+  A  + KE+  SG +PN ITY  I++  F  R+     E+  ++ + G 
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+++ A  
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L       G   D  T++++ + L + G+++        M + G  ++    N IV +L 
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 738 QRGDITRA 745



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 137/271 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  + + CK  R+ ++E +    +R+GV PD++TYN LID  C     D    +
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD+VTY +LI G  R S +  +L L  EM+  G+ P++ +YN ++  LF 
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 658

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR+  A+ +      +G  P+  TY+ + +        +   ++  +M+
Sbjct: 659 FNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             G + D     +++   ++ G +  A  Y+
Sbjct: 719 ENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 14/334 (4%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 155
           + DE+L  G    ++  N  +  + +   P  A   +  M     G +TP   T+ I++ 
Sbjct: 42  VFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHA 214
             C+    D        + K GF  + +T+  L+KGLC   R   A   +L+ + + G  
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           P+  +Y  ++K  C  NR  +  LE+L  M   +  G   D   Y TV+  F K G   +
Sbjct: 161 PDVFSYNNLLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A     +M+  G+  D+V+Y+++I   CK   ++ A  +L+ M K G   D  T+  ++ 
Sbjct: 220 AYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G C +G  K A   L+ M   G + N+  Y+ +++ L K+G+   A  +F+SM  +    
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D  TY +++        L     LL   +++G++
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQ 373



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 37/241 (15%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P   TY  ++ CC R  +  LG   L  + +KG+  D   +  ++       R  +A D 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           + + +T+ G   D+ SYN L+   C E + + A  LL  M                    
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD----------------- 192

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
                +G           G   ++ +YN +++   K+G  D A + +  M     + D  
Sbjct: 193 -----RGG----------GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TYSS++  LCKA+ +  A ++L + +K+GV        +++ G   SG  +EA     K+
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 450 R 450
           R
Sbjct: 298 R 298


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 220/445 (49%), Gaps = 4/445 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +NI +  FC+  +L  A +++   ++ G  P+ +T++ LI+ +C          +++RM 
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT N+LI G      ++ +L L+D M++ G   +  +Y  +++ + + G   
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F+ M    +      ++I+++ LCK+   D+AL +F  ++  G   ++V Y+ +I
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  GR      +L+E+      PN +T++ ++    +  K     E+ + M  +G  
Sbjct: 287 GGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIA 346

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K  RL EA   ++ MV+ G + +IV+Y+ LIN YCK  +++    L
Sbjct: 347 PDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRL 406

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             E+  +G   D  T+  L+ G C++G +  A+   + M   G   ++  Y  ++D L  
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466

Query: 370 DGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G++  A+ +FE M+          Y+ ++H +C A ++  A  L  S    GV+     
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              ++ GL   G   EA  +  K++
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMK 551



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 186/375 (49%), Gaps = 5/375 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    +I + + CK   L+ A ++  +    G+  DVV Y+ +I   C    +D G  
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M    I P+VVT+++LI    +   L  + +L +EM+  GI PD  +Y+SL+    
Sbjct: 301 MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  +  EAN++   M+     P   T++I++N  CK +  DN +R+F  +   G V + V
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN L++G C++G+L  A+ + +E+   G  P+ +TY  ++     N + +  LEI   M
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480

Query: 244 KRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++      G G Y  +I       ++ +A      +   GV+ D+++YN +I   CK+G 
Sbjct: 481 QKSRMIL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGS 539

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           L  A +L  +M++ G      T+ ILI   L  +G I    L +E M   GF ++     
Sbjct: 540 LSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVEL-IEEMKMRGFAADASTIK 598

Query: 362 CIVDRLGKDGKIDHA 376
            +V  L  DG++D  
Sbjct: 599 MVVVML-SDGRLDKT 612



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 203/422 (48%), Gaps = 39/422 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  ++ T N++I+ +C+       ++++ R  + G  P+ +T+++LI G      +S +
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + L+D M+EM   P+V + N+L++ L   G+  EA  +   M+         T+  +LN 
Sbjct: 159 VALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNR 218

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK+  T  AL +FR +++      +V Y+I+I  LCK G L  A               
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDA--------------- 263

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
                               L + + M+ KG   D   Y ++I      GR  +    + 
Sbjct: 264 --------------------LSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLR 303

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+   +  ++V+++ LI+++ KEGKL  A  L +EM  +G   D  T++ LIDG CK  
Sbjct: 304 EMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +  A   L+ M   G + N+  Y+ +++   K  ++D+ + +F  +     V D+ TY+
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++V   C++ +L  A +L    +  GV         ++DGL  +G  ++A +I  K++ +
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483

Query: 453 KI 454
           ++
Sbjct: 484 RM 485



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 172/346 (49%), Gaps = 2/346 (0%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           VV Y+++ID+ C+  + D   ++ N M   GI  DVV Y+S+I G   +        +L 
Sbjct: 244 VVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLR 303

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM+   I P+V ++++L+    + GK  EA  ++ +M+   + P T T++ +++G CK  
Sbjct: 304 EMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A +M   +   G  P +VTY+ILI   CKA R+     +  E+   G   + +TY 
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T+++   ++ K  +  E+   M  +G       Y  ++      G L++A +  E+M   
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            + L I  YN +I+  C   K++ A+ L   +  +G + D  T+ ++I GLCK G++  A
Sbjct: 484 RMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543

Query: 342 RLHLEYMNKIGFDSNLEAYNCIV-DRLGKDGKIDHAINVFESMEVK 386
            +    M + G   +   YN ++   LG  G I  ++ + E M+++
Sbjct: 544 DMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVI-SSVELIEEMKMR 588



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 141/291 (48%), Gaps = 4/291 (1%)

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A+ +F  + +   +P L+ ++ L   + +           KE+  +G   N  T   
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++ C  R RK      ++    + G+  +   + T+I  F   GR+ EA   +++MV   
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            + ++V+ NTLIN  C +G++  A +L+D M K G E ++ T+  +++ +CK+GN   A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
                M +    +++  Y+ ++D L KDG +D A+++F  ME+K    D   YSS++  L
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           C   R    +K+L   +   +        A++D     G   EAK++ +++
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL +A  ++   +  G  P++VTY++LI++YC+    D G  +   +   G+  D
Sbjct: 359 FCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVAD 418

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY--------------------- 115
            VTYN+L+ G  ++  L+ + +L  EM+  G+PP V +Y                     
Sbjct: 419 TVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFE 478

Query: 116 --------------NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                         N ++H +    K D+A  +F  +    + P   T+N+M+ GLCK  
Sbjct: 479 KMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKG 538

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +FR +++ G  P   TYNILI+       + ++  +++E+   G A +A T  
Sbjct: 539 SLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIK 598

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++      R  K  L++LS
Sbjct: 599 MVVVMLSDGRLDKTFLDMLS 618


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 202/410 (49%), Gaps = 5/410 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    NI +   CK  +L+KA+  +      GV P++VTYN ++  YC     +A   
Sbjct: 218 KSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADA 277

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           IL  M+   I PD  TY SLI+G  +   L  +  + +EM++ G+ P    YN+L+    
Sbjct: 278 ILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  D A+    +M+   ++P  +T+N +++ L   + TD A  M + +Q+ G  P+ +
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYNILI G C+    + A  +  E+  SG  P   TYT+++    +  + K   ++   +
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D   +  +I        +K A + ++ M    V  D V++NT++  +C+EGK+
Sbjct: 458 TSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L DEM+++G + D  +   LI G  + G+IK A      M   GF+  +  YN +
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
           V  L K+ + D A  + + M  K    D  TY +++  + K   +P  +K
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV-NIPDENK 626



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 212/432 (49%), Gaps = 14/432 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K NR E A  +  +  RL +   V T+N++I+  C+          +  M  
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+ P++VTYN+++ G   +  +  +  +L  M    I PD ++Y SL+  + + G+ +E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++F++M+   L P    +N +++G C     D A      + K G  P + TYN LI 
Sbjct: 310 ASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIH 369

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILSAMKRK 246
            L    R   A  ++KE+ + G +P+AITY  ++    +C    + + L  E+L++    
Sbjct: 370 ALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLAS---- 425

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y +++    K  R+KEA D  +++ ++GV  D++ +N LI+ +C    ++ A
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGA 485

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + LL +M++     D+ T   ++ G C+ G ++ AR   + M + G   +  ++N ++  
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545

Query: 367 LGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
             + G I  A  V   M +   F     TY+++V  LCK +    A +LL   +  G+  
Sbjct: 546 YSRRGDIKDAFRVRNEM-LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604

Query: 422 LKSAQKAVVDGL 433
             +    +++G+
Sbjct: 605 DDTTYFTLIEGI 616



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 143/329 (43%), Gaps = 39/329 (11%)

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           + + DEA   F  M    + P   T N +L+   K   T+ A  ++  + +      + T
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYT 223

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  LCK G+L+ A+  +  +  SG  PN +TY TI+                    
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH------------------- 264

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                    GYC+        GR++ A   +  M    ++ D  +Y +LI+  CK+G+LE
Sbjct: 265 ---------GYCSS-------GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLE 308

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  + +EM ++G       +  LIDG C  GN+  A  + + M K G    +  YN ++
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L  + + D A  + + ++ K    D+ TY+ +++  C+      A  L    L SG++
Sbjct: 369 HALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIK 428

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             K    +++  L      +EA  +  KI
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKI 457



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 252 GFGYCTVIAAFVK----IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           GF    V    +K    + R  EA +    M   GV   I + N+L++L+ K  + EAA+
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +L  EM +   +   YT  I+I+ LCK G +K A+  + +M   G   N+  YN IV   
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              G+++ A  +  +M+ +    DSFTY S++  +CK  RL  ASK+    ++ G+R   
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326

Query: 424 SAQKAVVDGLRHSG 437
                ++DG  + G
Sbjct: 327 VIYNTLIDGFCNKG 340


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 211/437 (48%), Gaps = 39/437 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R    + ++ + +R+   P++VT+N LI   C+   F+  + +L +M E G +PD
Sbjct: 237 LCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPD 296

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  +   L  + ++L+ M   G+ P+V  YN+L+  L    + +E   +  
Sbjct: 297 IRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLA 356

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   + + G +P+++TY  +I G CK G
Sbjct: 357 EMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEG 416

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN I+YT ++K                            G C
Sbjct: 417 LIDEAVMLLKSMTACGCKPNTISYTIVLK----------------------------GLC 448

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +         R  +A D M QM+  G  L+ +++NTLIN  CK+G +E A  LL +M   
Sbjct: 449 SA-------ERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +++ +IDGL KAG    A   L  M   G   N   Y+ I   L ++G+I+  
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I +F++++      D+  Y++++ +LCK      A + L   + SG    +S    ++ G
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA+++ +++
Sbjct: 622 LASEGFVKEAQEMLTEL 638



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 193/400 (48%), Gaps = 4/400 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   R+  A A++ +  R G  P    Y+++++A C+   F +   +L  +   G + 
Sbjct: 131 ALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCAL 190

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV   N ++        +  +L LL ++   G  PDV SYN+++  L    +      + 
Sbjct: 191 DVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELM 250

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M+     P   TFN +++ LC+N   +    +   + +HG  P++  Y  +I G+CK 
Sbjct: 251 EEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKE 310

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G L  A  IL  +   G  PN + Y T++K      +++   E+L+ M  K    D   +
Sbjct: 311 GHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTF 370

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++  F + G +    + +EQM+  G   D+++Y T+IN +CKEG ++ A +LL  M  
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +  ++TI++ GLC A     A   +  M + G   N   +N +++ L K G ++ 
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           AI + + M V     D  +YS+++  L KA +   A +LL
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 171/387 (44%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+    E+   ++   +  G  PD+  Y  +ID  C+    +  + ILNRM 
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMP 324

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+VV YN+L+ G         + +LL EM +   P D  ++N L+    Q G  D
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               + + M+     P   T+  ++NG CK    D A+ + + +   G  P  ++Y I++
Sbjct: 385 RVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC A R   A  ++ ++   G   N IT+ T++    +    +  +E+L  M   G +
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y TVI    K G+  EA + +  MV  G+  + + Y+++ +   +EG++     +
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 564

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D ++      D   +  +I  LCK G  + A   L YM   G   N   Y  ++  L  
Sbjct: 565 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
           +G +  A  +   +  K +     M H
Sbjct: 625 EGFVKEAQEMLTELCSKGALRKHLMKH 651



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 9/379 (2%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           YN ++  YC+    ++      R+  A  + P+  TY  ++        ++ +L +LDEM
Sbjct: 93  YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G  P    Y+ ++    + G    A RV +D+            N++LN +C     
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D AL + R L   G  P++V+YN ++KGLC A R    + +++E+      PN +T+ T+
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    RN  ++   E+L+ M   G T D   Y T+I    K G L+ A + + +M + G+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V YNTL+   C   + E    LL EM  +    D  T  IL+D  C+ G +     
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 399
            LE M + G   ++  Y  +++   K+G ID A+ + +SM       ++ +Y+ ++  LC
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 400 KAKRLPSASKLLLSCLKSG 418
            A+R   A  L+   ++ G
Sbjct: 449 SAERWVDAEDLMSQMIQQG 467


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 220/445 (49%), Gaps = 4/445 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +  FC+  +L  A + +   I+LG  P+ +T++ LI+  C          +++RM 
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD++T N+L+ G   +   + ++ L+D+M+E G  P+  +Y  +++ + + G+  
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M   ++      ++I+++GLCK+   DNA  +F  ++  G    ++TYNILI
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C AGR      +L+++      PN +T++ ++    +  K +   E+   M  +G  
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K   L +A   ++ MV+ G   +I ++N LIN YCK  +++    L
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M  +G   D  T+  LI G C+ G +  A+   + M       N+  Y  ++D L  
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+ + A+ +FE +E      D   Y+ ++H +C A ++  A  L  S    GV+     
Sbjct: 584 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 643

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              ++ GL   G   EA+ +  K+ 
Sbjct: 644 YNIMIGGLCKKGPLSEAELLFRKME 668



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 179/367 (48%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     +I +   CK   L+ A  +  +    G+  +++TYN+LI  +C    +D G  
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M +  I+P+VVT++ LI    +   L  + +L  EM+  GI PD  +Y SL+    
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 477

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    D+AN++   M+     P   TFNI++NG CK    D+ L +FR +   G V + V
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+G C+ G+L  A+ + +E+      PN +TY  ++     N + +  LEI   +
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D   Y  +I       ++ +A D    +   GV+  + +YN +I   CK+G L
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A LL  +ME+ G   D +T+ ILI      G+   +   +E + + GF  +      +
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 717

Query: 364 VDRLGKD 370
           +D L  D
Sbjct: 718 IDMLSDD 724



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 205/428 (47%), Gaps = 4/428 (0%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I    LP V+ ++ L  A  +   +D    +  +M   GI+ ++ T + +I    R  
Sbjct: 176 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 235

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  +   + +++++G  P+  ++++L++ L   G+  EA  +   M+     P   T N
Sbjct: 236 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 295

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            ++NGLC +     A+ +   + ++G  P  VTY  ++  +CK+G+   A  +L+++ + 
Sbjct: 296 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 355

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               +A+ Y+ I+    ++        + + M+ KG T +   Y  +I  F   GR  + 
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +  M+   +  ++V+++ LI+ + KEGKL  A  L  EM  +G   D  T+T LIDG
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
            CK  ++  A   ++ M   G D N+  +N +++   K  +ID  + +F  M     V D
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 535

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + TY++++   C+  +L  A +L    +   V       K ++DGL  +G   +A +I  
Sbjct: 536 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 595

Query: 448 KIRMAKIS 455
           KI  +K+ 
Sbjct: 596 KIEKSKME 603



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 166/344 (48%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D V Y+++ID  C+  S D  + + N M   GI+ +++TYN LI G            LL
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M++  I P+V +++ L+    + GK  EA  + ++MI   + P T T+  +++G CK 
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            + D A +M   +   G  P + T+NILI G CKA R+     + +++   G   + +TY
Sbjct: 480 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+++      K  +  E+   M  +    +   Y  ++      G  ++A +  E++  
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
             ++LDI  YN +I+  C   K++ A+ L   +  +G +    T+ I+I GLCK G +  
Sbjct: 600 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 659

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           A L    M + G   +   YN ++     DG    ++ + E ++
Sbjct: 660 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 4/311 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +F+DMI     P    F+ + + + K +  D  L + + ++  G    L T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C+  +L  A   + ++   G+ PN IT++T++       +    LE++  M   
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+  D     T++      G+  EA   +++MV  G Q + V+Y  ++N+ CK G+   A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +ME++  + D   ++I+IDGLCK G++  A      M   G  +N+  YN ++  
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
               G+ D    +   M  +    +  T+S ++ +  K  +L  A +L    +  G+   
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 423 KSAQKAVVDGL 433
                +++DG 
Sbjct: 466 TITYTSLIDGF 476


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 196/384 (51%), Gaps = 7/384 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD  T+ +L+   C+    +    +L RM+E G  PD   YN+LI+G ++      +   
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L EM++    P V +Y +++  L + G+  +A ++  +M     +P   T+N+++ GLC+
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            R  D A +M   +   G+ P++VTYN  IKGLCK  R+  AR  L  +  +   P+ ++
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVS 184

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YTT++    ++        +L  M  +G T D   Y ++I  F K G ++ A   ++ M+
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G + ++V+YN+L+    + G +  A  +L EME++GF  D  ++   IDGLCKA  +K
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A+   + M + G   N  +Y+ +V+ L K  ++D AI + E      ++ D   Y+ ++
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 396 HNLCKAKRLPSASKLLLSCLKSGV 419
             LCK  R   A  L    L   +
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKI 388



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 208/414 (50%), Gaps = 7/414 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  + KA    +A   + + ++   LP VVTY  ++D  C+         +L+ M
Sbjct: 47  IYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEM 106

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           R+ G SP++ TYN ++ G      L  +  +L+EM   G  PDV +YNS +  L +  + 
Sbjct: 107 RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRV 166

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA +    M    +TP   ++  ++NGLCK+   D+A RM   +   G  P++VTY+ L
Sbjct: 167 DEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSL 223

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK G +  A  +L  +   G  PN + Y +++    R        ++L  M+R+G+
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 283

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           T D   Y   I    K  R+K+A    ++MV  G   +  SY+ L+   CK+ +L+ A  
Sbjct: 284 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAIT 343

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L+++  ++    D   +T+L+DGLCK G    A  L  + +++   + ++  YN ++D  
Sbjct: 344 LVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 403

Query: 368 GKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            K  +ID A+ + + M  ++     T++ +VH LC   RL  A  +LL+ +  G
Sbjct: 404 CKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 457



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 194/391 (49%), Gaps = 7/391 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +    PD  T+  L+ G  R++ L  +  LL  M EMG  PD   YN+L+    +   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A +   +M+     P   T+  +++GLCK   T +A+++   ++  G  P + TYN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +++GLC+  +L  A+ +L+E+   G+ P+ +TY + +K   +  +     + L+ M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            T D   Y TVI    K G L  A+  ++QM   G   D+V+Y++LI+ +CK G++E A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LLD M K G   +   +  L+  L + G+I  A   L  M + GF  ++ +YN  +D L
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K  ++  A  VF+ M  +    ++ +YS +V  LCK K L  A  L+    +    +  
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                ++DGL   G   EA  + SK+   KI
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 185/370 (50%), Gaps = 5/370 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +R+++A   +    R+ V PDVV+Y  +I+  C+    D+   +L++M   G +PD
Sbjct: 160 LCKCDRVDEARKFLA---RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPD 216

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+SLI G  +   +  ++ LLD ML++G  P++ +YNSL+  L +LG   +A  +  
Sbjct: 217 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 276

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   ++N  ++GLCK      A  +F  + + G  P   +Y++L++ LCK  
Sbjct: 277 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKK 336

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDGFGY 255
            L  A  ++++  +     + + YT ++    +  ++     + S  +  K    D F Y
Sbjct: 337 ELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFY 396

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++ +  K  ++ +A    +QM+      ++V++N L++  C + +L  A  +L  M  
Sbjct: 397 NVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +GF  D  T+  L+D +CK G    A    E   K G   ++  Y+ ++  L  +   + 
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515

Query: 376 AINVFESMEV 385
           A  +F  ++V
Sbjct: 516 AYLLFTKLDV 525



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 169/365 (46%), Gaps = 16/365 (4%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
           KAE ++++  R G  PDVV+YN  ID  C+         + +RM E G +P+  +Y+ L+
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMIC 140
               +   L  ++ L+++  E     D+  Y  L+  L + G+ DEA    ++V  + IC
Sbjct: 330 EELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 389

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P    +N+ML+  CK R  D AL++ + + +      +VT+NIL+ GLC   RL  
Sbjct: 390 ---EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSD 445

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +L  + D G  P+ +TY T++    +  K    LE+     + G   D   Y  +I 
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 505

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
             V     +EA            +LD+  +N +I  Y + G  +    L  E+ +   E 
Sbjct: 506 GLVHENMAEEAYLLF-------TKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEP 558

Query: 321 DKYTHTILIDG-LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           +  T    I G L KA ++  AR   +   K GF  +L   N ++D   K G ++ A  +
Sbjct: 559 NARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618

Query: 380 FESME 384
           F SM+
Sbjct: 619 FYSMK 623



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 8/196 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   C  +RL  AE +++  +  G +PD VTY  L+DA C+     A   +     +
Sbjct: 431 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTY++LI G    ++   +  L  ++       DV  +N+++    + G  D 
Sbjct: 491 GGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDL 543

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG-LCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
             ++F ++I  D+ P   TF   ++G L K      A  +F    K GF P+L   N LI
Sbjct: 544 GLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLI 603

Query: 190 KGLCKAGRLRTARWIL 205
               K G L  AR I 
Sbjct: 604 DVFAKCGDLEEARRIF 619



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 9/215 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ + + CK  +++KA  I    +      +VVT+N+L+   C         T+L  M +
Sbjct: 397 NVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVD 455

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTY +L+    +    + +L+L +E ++ G  PDV +Y++L+  L      +E
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  +         A +N M+ G  +N   D  L++F  L +    P   T+   I 
Sbjct: 516 AYLLFTKLD-------VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEIS 568

Query: 191 G-LCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           G L KA  L  AR +       G  P+     T++
Sbjct: 569 GKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLI 603


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 214/440 (48%), Gaps = 44/440 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K +R+++A  ++ +   +G  PDV T+N +I  +C+      G  +++RM   G +P+ +
Sbjct: 257 KRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDM 316

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR-VFQD 137
           TY  L+ G  +    +C +D    +L     P+V  +N+L++   + G+ +EA   V+  
Sbjct: 317 TYGYLMHGLCK----TCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDK 372

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI     P   TF+ ++NGLCK     +AL +   +   G  P L TY ILI G CK G+
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDG 252
           L  A  IL+E+   G + N + Y  ++    ++ K    L++   M  KG     +TF+ 
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492

Query: 253 --FGYC----------------------------TVIAAFVKIGRLKEATDYMEQMVTDG 282
             FG C                            T+I AF++ G ++EA   +  M+  G
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
             LD ++YN LI   CK G +E    L +EM ++G      T  ILI+G C AG +  A 
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             +  M   GF  ++  YN +++ L K G+I  A+N+FE ++ +    DS TY++++  L
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWL 672

Query: 399 CKAKRLPSASKLLLSCLKSG 418
           C+      A  LL   +++G
Sbjct: 673 CREGAFDDACFLLYRGVENG 692



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 201/419 (47%), Gaps = 9/419 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  N+ +      N    A  +  D +  GV P+  T+ +++ A C     D    +L
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M + G  P+ + Y +LI   ++   +  +L LL+EM  MG PPDV ++N++++   +L
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  E  ++   MI    TP   T+  +++GLCK    D A  +   +      P +V +
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHF 349

Query: 186 NILIKGLCKAGRLRTAR-WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           N L+ G  + GRL  A  ++  ++ ++G+ P+  T++T++    +   +   LE+++ M 
Sbjct: 350 NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMD 409

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   +   Y  +I  F K G+L+EA   + +M+T G  L+ V YN LI+  CK GK+ 
Sbjct: 410 AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIH 469

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +  EM  +G + D +T   LI GLC+   ++ A      M   G  +N   +N ++
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               + G+I  A+ +   M  +    D  TY+ ++  LCK   +     L    ++ G+
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 201/390 (51%), Gaps = 13/390 (3%)

Query: 18  CKANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSF-DAGYTILNRMREAGIS 74
           CK  R+++A+A++  + G      P+VV +N L++ + +     +A   + ++M   G  
Sbjct: 326 CKTCRIDEAQALLSKVPG------PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV 379

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PDV T+++L+ G  +  L   +L+L+++M   G  P++ +Y  L+    + G+ +EA  +
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            ++M+    +  T  +N +++ LCK+     AL MF  +   G  P++ T+N LI GLC+
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
              +  A  + +++   G   N++T+ T++    R  + +  L++++ M  +G   D   
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEIT 559

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I A  K G +++     E+M+  G+   I++ N LIN +C  GK+  A   + +M 
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +GF  D  T+  LI+GLCK G I+ A    E +   G   +   YN ++  L ++G  D
Sbjct: 620 HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFD 679

Query: 375 HAINVF----ESMEVKDSFTYSSMVHNLCK 400
            A  +     E+  V +  T++ +V+N  K
Sbjct: 680 DACFLLYRGVENGFVPNDVTWNILVYNFGK 709



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 213/459 (46%), Gaps = 47/459 (10%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G + G       Y +LID       F     +L +M+E GI      +  ++    R  L
Sbjct: 95  GAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGL 154

Query: 93  LSCSLDLLDEMLEMGI---PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
              +  LL +M   G+    P   SYN ++  L     P  A+ VF DM+   ++P   T
Sbjct: 155 PGQATRLLLDM--KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYT 212

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F +++  LC     DNA  + R + KHG VP  + Y  LI  L K  R+  A  +L+E+ 
Sbjct: 213 FGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMF 272

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGYC----------- 256
             G  P+  T+ T++    R  +   G +++  M  KG+T +   +GY            
Sbjct: 273 LMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRID 332

Query: 257 ------------------TVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLY 297
                             T++  FV+ GRL EAT ++ ++M+ +G   D+ +++TL+N  
Sbjct: 333 EAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGL 392

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK+G   +A  L+++M+ +G + +  T+TILIDG CK G ++ A L L  M   GF  N 
Sbjct: 393 CKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
             YN ++  L K GKI  A+++F  M  K    D FT++S++  LC+   +  A  L   
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            +  GV     A     + L H+  RR   +IQ  +++ 
Sbjct: 513 MVLEGV----IANSVTFNTLIHAFLRR--GEIQEALKLV 545



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 163/326 (50%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK      A  ++ D    G  P++ TY +LID +C+    +    IL  M   G S + 
Sbjct: 393 CKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNT 452

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V YN+LI+   ++  +  +LD+  EM   G  PD++++NSL+  L ++ + ++A  +++D
Sbjct: 453 VGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRD 512

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   +   + TFN +++   +      AL++   +   G   + +TYN LIK LCK G 
Sbjct: 513 MVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGA 572

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +     + +E+   G  P+ IT   ++       K    LE +  M  +G++ D   Y +
Sbjct: 573 VEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS 632

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K GR++EA +  E++  +G+Q D ++YNTLI   C+EG  + A  LL    + G
Sbjct: 633 LINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692

Query: 318 FECDKYTHTILIDGLCKAGNIKGARL 343
           F  +  T  IL+    K  N +G  +
Sbjct: 693 FVPNDVTWNILVYNFGKQSNSEGQTI 718



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 116/220 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  +   CK  ++ +A  +  +    G  PD+ T+N LI   C+    +    +
Sbjct: 450 LNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALAL 509

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M   G+  + VT+N+LI    R   +  +L L+++ML  G P D  +YN L+  L +
Sbjct: 510 YRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCK 569

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  ++   +F++MI   LTP   T NI++NG C      NAL   R +   GF P++VT
Sbjct: 570 TGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVT 629

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           YN LI GLCK GR++ A  + ++L   G  P++ITY T++
Sbjct: 630 YNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 7/231 (3%)

Query: 1   MFGKLSTR-------LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           MFG++S++         N  +   C+ + +E A A+  D +  GV+ + VT+N LI A+ 
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL 533

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         ++N M   G   D +TYN LI    +   +   L L +EM+  G+ P + 
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSII 593

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + N L++     GK   A    +DMI    +P   T+N ++NGLCK      AL +F  L
Sbjct: 594 TCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL 653

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           Q  G  P+ +TYN LI  LC+ G    A ++L    ++G  PN +T+  ++
Sbjct: 654 QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC A ++  A   + D I  G  PD+VTYN LI+  C+         +  +++ 
Sbjct: 596 NILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQA 655

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            GI PD +TYN+LI    R      +  LL   +E G  P+  ++N L++
Sbjct: 656 EGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVY 705


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 227/478 (47%), Gaps = 45/478 (9%)

Query: 11  NICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +   C  NR ++A    + +  DG      PDVV+Y  +I+ + +    D  Y   +
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGG--DCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + GI P+VVTY+S+IA   +   +  ++++L  M++ G+ P+  +YNS++H     G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +P EA    + M    + P   T+N +++ LCKN     A +MF  + K G  PE+ TY 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L++G    G L     +L  +  +G  PN   ++ ++    +  K    + + S M+++
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD------------------------- 281
           G   D   Y TVI    K GR+++A  Y EQM+ +                         
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463

Query: 282 ----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                     G+ LD + +N++I+ +CKEG++  +  L D M + G + D  T++ LIDG
Sbjct: 464 KELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 523

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
            C AG +  A   L  M  +G   +   YN +++   K  +++ A+ +F  ME      D
Sbjct: 524 YCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             TY+ ++  L + +R  +A +L +   +SG ++  S    ++ GL  +    EA ++
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 216/441 (48%), Gaps = 7/441 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMRE 70
           I + + C A RL+   A + + I+ G   D + +  L+   C    + DA   +L RM +
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKP 128
            G  P+V +YN L+ G    +    +L+LL  M + G   PPDV SY ++++  F+ G  
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   + +M+   + P   T++ ++  LCK +  D A+ +   + K+G +P   TYN +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G C +G+ + A   LK++   G  P+ +TY ++M    +N +     ++  +M ++G 
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T++  +   G L E    ++ MV +G+  +   ++ LI  Y K+GK++ A L
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +M +QG   D  T+  +I  LCK+G ++ A  + E M           YN ++  L 
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              K D A  +   M  +    D+  ++S++ + CK  R+  + KL    ++ GV+    
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++DG   +G   EA K+
Sbjct: 516 TYSTLIDGYCLAGKMDEATKL 536



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 182/389 (46%), Gaps = 7/389 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P++ TY +LI + C     D G+  L  + + G   D + +  L+ G   +   S ++
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 154
           D+ L  M ++G  P+V+SYN L+  L    +  EA  + Q M    GD  P   ++  ++
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG  K    D A   +  +   G +P +VTY+ +I  LCKA  +  A  +L  +  +G  
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TY +I+     + + K  +  L  M   G   D   Y +++    K GR  EA   
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M   G++ +I +Y TL+  Y  +G L   + LLD M + G   + Y  +ILI    K
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G +  A L    M + G + +   Y  ++  L K G+++ A+  FE M        +  
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           Y+S++H+LC   +   A +L+L  L  G+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 10/360 (2%)

Query: 60  AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           A  +  NRM  AG   ++P++ TY  LI        L      L  +++ G   D  ++ 
Sbjct: 71  AAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFT 130

Query: 117 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            L+  L    +  +A + V + M      P   ++NI+L GLC    +  AL + + +  
Sbjct: 131 PLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPD 190

Query: 176 HGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            G    P++V+Y  +I G  K G L  A     E+ D G  PN +TY++I+    + +  
Sbjct: 191 DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAM 250

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L++M + G   +   Y +++  +   G+ KEA  ++++M +DGV+ D+V+YN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK G+   A  + D M K+G + +  T+  L+ G    G +      L+ M + G 
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             N   ++ ++    K GK+D A+ VF  M  +    D+ TY +++  LCK+ R+  A +
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  + + CK  R+ ++E +    +R+GV PD++TY+ LID YC     D    +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M   G+ PD VTYN+LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN  TD ALRMF+ L       E  T
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +   L  +G  P+  TY+ + +        +   ++  +M+
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             G T +     +++   ++ G +  A  Y+
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 169/368 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +C + K  ++++A  +     + G+ PD VTY  +I   C+    +       +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  +SP  + YNSLI           + +L+ EML+ GI  D   +NS++    + G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTYN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK  R+  A  + +E+  SG +P+ ITY  I++  F+ R+     E+   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K     EA    + +    +QL+  ++N +I    K G+ + A  
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D  T++++ + L + G ++        M + G  +N    N IV +L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 369 KDGKIDHA 376
           + G I  A
Sbjct: 736 QRGDITRA 743



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 9/366 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + LN    T+       CK+ R+E A       I   + P  + YN LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F  +D    ++  M + GI  D + +NS+I    +   +  S  L D M+ +G+ PD+ 
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y++L+      GK DEA ++   M+   + P   T+N ++NG CK    ++AL +FR +
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P+++TYNI+++GL +  R   A+ +   + +SG      TY  I+    +N   
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +   +       +   +  +I A +K+GR  EA D    +  +G+  D+ +Y+ +
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
                ++G LE    L   ME+ G   +      ++  L + G+I  A  +L  +++  F
Sbjct: 696 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHF 755

Query: 354 DSNLEA 359
             +LEA
Sbjct: 756 --SLEA 759



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 43/371 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ P+   +++LI AY +    D    + ++MR+ G++PD VTY ++I    ++  +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++  + P    YNSL+H L    K D+A  +  +M+   +   T  FN +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P+++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY T++                             GYC       KI R+++A  
Sbjct: 546 KPDCVTYNTLIN----------------------------GYC-------KISRMEDALV 570

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K  N+    L + + N    D  LE   +N ++  L K G+ D A ++F ++     V D
Sbjct: 631 K-NNLTDEALRM-FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 388 SFTYSSMVHNL 398
             TYS M  NL
Sbjct: 689 VRTYSLMAENL 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 7/291 (2%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
           + DE+L  G    ++  N  +  + +       +R  +    G  ++TP   T+ I++  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
            C     D        + K GF  + + +  L+KGLC   R   A   +L+ +   G  P
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLKEAT 272
           N  +Y  ++K  C  NR  +  LE+L  M   G     D   Y TVI  F K G L +A 
Sbjct: 161 NVFSYNILLKGLCDENRSQE-ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +M+  G+  ++V+Y+++I   CK   ++ A  +L  M K G   +  T+  ++ G 
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           C +G  K A   L+ M+  G + ++  YN ++D L K+G+   A  +F+SM
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 48/257 (18%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINL 296
           +   + R+G     +G    +A   +       + Y  M +   D V  ++ +Y  LI  
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 355
            C  G+L+  +  L  + K+GF  D    T L+ GLC       A  + L  M ++G   
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160

Query: 356 NLEAYN-------------------------------------CIVDRLGKDGKIDHAIN 378
           N+ +YN                                      +++   K+G +D A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
            +  M     + +  TYSS++  LCKA+ +  A ++L S +K+GV        ++V G  
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 435 HSGCRREA----KKIQS 447
            SG  +EA    KK+ S
Sbjct: 281 SSGQPKEAIGFLKKMHS 297


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 186/363 (51%), Gaps = 4/363 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  ++ +A  +  + I  G+ PD+ TYN LI A C    +    T+LN M  
Sbjct: 294 NTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 353

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
           + I P+VV +++++    +  +++ + D++D M++ G+ PDV +Y +LM  HCL    + 
Sbjct: 354 SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL--RSEM 411

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA +VF  M+     P   ++NI++NG C+ +  D A+ +   +   G + + VTYN L
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC  GRL+ A  +  E+  SG  P+ +TY  ++    +N      + +L A++    
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y   I    + G L+ A D    + + G+Q D+ +YN +I+  CK G L+ A  
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  +M++ G   D   +  +I G  ++    GA   L+ M   GF +++     IV+ L 
Sbjct: 592 LFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLS 651

Query: 369 KDG 371
            DG
Sbjct: 652 DDG 654



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 205/441 (46%), Gaps = 4/441 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   ++ +A  +    I  G  PDVVTY  L++  C+  +  A   +L  M 
Sbjct: 223 FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMV 282

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +    P+V+ YN++I    ++  ++ + +L  EM+  GI PD+++YNSL+H L  L +  
Sbjct: 283 QKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWK 342

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               +  +M+   + P    F+ +++ LCK      A  +   + K G  P++VTY  L+
Sbjct: 343 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 402

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A  +   +   G  PN  +Y  ++    + ++    + +L  M  +G  
Sbjct: 403 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 462

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I     +GRL+ A     +MV  G   D+V+Y  L++  CK   L  A +L
Sbjct: 463 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 522

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  +E    + D   + I IDG+C+AG ++ AR     ++  G   ++  YN ++  L K
Sbjct: 523 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK 582

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A  +F  M+     +D   Y++++    ++     A++LL   L  G     S 
Sbjct: 583 RGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVST 642

Query: 426 QKAVVDGLRHSGCRREAKKIQ 446
              +V+ L   G  +  ++++
Sbjct: 643 TTLIVEMLSDDGLDQSFERLR 663



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 200/418 (47%), Gaps = 4/418 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T N+LI+++C        +++L ++ + G  PD  T+N+LI G      +  
Sbjct: 179 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 238

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+ +  G  PDV +Y +LM+ L ++G    A R+ + M+  +  P    +N +++
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 298

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TYN LI  LC     +    +L E+ +S   P
Sbjct: 299 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 358

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + ++T++    +     +  +++  M ++G   D   Y  ++        + EA    
Sbjct: 359 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 418

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   ++ SYN LIN YC+  +++ A  LL++M  QG   D  T+  LI GLC  
Sbjct: 419 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 478

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++ A      M   G   +L  Y  ++D L K+  +  A+ + +++E      D   Y
Sbjct: 479 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 538

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +  +  +C+A  L +A  L  +    G++        ++ GL   G   EA K+  K+
Sbjct: 539 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 206/407 (50%), Gaps = 6/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + +FC   RL  A +++   ++LG  PD  T+N LI   C          + ++  
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDVVTY +L+ G  +    S ++ LL  M++    P+V +YN+++  L +  +  
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +MI   ++P   T+N +++ LC      +   +   +     +P +V ++ ++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGY 248
             LCK G +  A  ++  +   G  P+ +TYT +M   C R+   +  +++   M  KG 
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDE-AVKVFDTMVHKGC 426

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  + +I R+ +A   +EQM   G+  D V+YNTLI+  C  G+L+ A  
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM   G   D  T+ IL+D LCK  ++  A + L+ +     D+++  YN  +D + 
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           + G+++ A ++F ++  K    D  TY+ M+H LCK   L  A+KL 
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 593



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 176/369 (47%), Gaps = 4/369 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F + D   +  NRM      P  V +  L+    +    S  L L  +M   GIPPDV+
Sbjct: 127 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 186

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + N L++    L +   A  V   ++     P   TFN ++ GLC       AL +F   
Sbjct: 187 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 246

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              GF P++VTY  L+ GLCK G    A  +L+ +      PN I Y TI+    ++R+ 
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 306

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                + S M  KG + D F Y ++I A   +   K  T  + +MV   +  ++V ++T+
Sbjct: 307 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CKEG +  A+ ++D M K+G E D  T+T L+DG C    +  A    + M   G 
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             N+ +YN +++   +  ++D A+ + E M ++    D+ TY++++H LC   RL  A  
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486

Query: 410 LLLSCLKSG 418
           L    + SG
Sbjct: 487 LFHEMVASG 495



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  V +  L+ +  +   +    ++  +M   GI PDV T N LI        L  +  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  ++N+L+  L   GK  EA  +F   I     P   T+  ++NGLCK
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R + +    P ++ YN +I  LCK  ++  A  +  E+   G +P+  T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++       ++K    +L+ M       +   + TV+ A  K G +  A D ++ M+
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+Y  L++ +C   +++ A  + D M  +G   +  ++ ILI+G C+   + 
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A   LE M+  G  ++   YN ++  L   G++ HAI +F  M    ++ D  TY  ++
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK   L  A  LL +   S +          +DG+  +G    A+ + S +
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 561



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 110/220 (50%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  NI +  +C+  R++KA  ++      G++ D VTYN LI   C          + 
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M  +G  PD+VTY  L+    +N  L+ ++ LL  +    +  D+  YN  +  + + 
Sbjct: 489 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 548

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ + A  +F ++    L P   T+NIM++GLCK    D A ++FR + ++G   +   Y
Sbjct: 549 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIY 608

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           N +I+G  ++     A  +L+E+   G + +  T T I++
Sbjct: 609 NTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVE 648


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 218/441 (49%), Gaps = 6/441 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +  F    R++ A +++   I+LG+ P +VT+  LI+  C+   F     + + M 
Sbjct: 136 LSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV 195

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV TY ++I G  +    + +  LL +M E G  P+V +Y++++    +  + +
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVN 255

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M    ++P   T+N ++ GLC       A  +   ++    +P++VT+N+L+
Sbjct: 256 EALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLV 315

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             +CK G++  A+ +LK + + G  P+ +TY+++M       +     ++  AM  KG  
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK 375

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y  +I  + K+ R+ EA     +M+  G+  + VSYNTLI+  C+ G L  A  L
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M   G   + +T++IL+DG CK G    A      M       NL  YN ++D + K
Sbjct: 436 FKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCK 495

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A  +F  + VK    ++  Y+++++ LCK   L  A +   +  + G    + +
Sbjct: 496 SGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS 555

Query: 426 QKAVVDGLRHSGCRREAKKIQ 446
              ++ G  H   + E++ +Q
Sbjct: 556 YNVIIRGFLHH--KDESRAVQ 574



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 201/399 (50%), Gaps = 4/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +  +A  +  D +  G  PDV TY  +I+  C+     A   +L +M EAG  P+
Sbjct: 178 LCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPN 237

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+++I    ++  ++ +LD+   M   GI PD+++YNSL+  L    +  EA+ +  
Sbjct: 238 VVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLN 297

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   ++ P   TFN++++ +CK      A  + + + + G  P++VTY+ L+ G     
Sbjct: 298 EMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRS 357

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  AR +   +   G  P+  +Y  ++    + ++     ++ + M  +G T +   Y 
Sbjct: 358 EVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYN 417

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    ++G L+EA +  + M T+G   ++ +Y+ L++ +CK+G    A+ L   M+  
Sbjct: 418 TLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQST 477

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + +   + ILID +CK+GN++ AR     +   G   N + Y  I++ L K+G +D A
Sbjct: 478 YSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +  F +ME      D  +Y+ ++      K    A +L+
Sbjct: 538 LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 204/410 (49%), Gaps = 4/410 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P++ T ++LI+ +      D  +++L ++ + G+ P +VT+ +LI    +    + +
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA 187

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L D+M+  G  PDV++Y ++++ L ++G+   A  + + M      P   T++ +++ 
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K+R  + AL +F  ++  G  P++ TYN LI+GLC   + + A  +L E+      P+
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+  ++    +  K      +L  M   G   D   Y +++  +     + EA    +
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+T G + D+ SYN LIN YCK  +++ A  L +EM  QG   +  ++  LI GLC+ G
Sbjct: 368 AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLG 427

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
           +++ AR   + M+  G   NL  Y+ ++D   K G    A  +F +M+   S      Y+
Sbjct: 428 SLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYN 487

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            ++  +CK+  L  A KL       G++        +++GL   G   EA
Sbjct: 488 ILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 179/367 (48%), Gaps = 5/367 (1%)

Query: 50  DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR-NSLLSCSLDLLDEMLEMGI 108
           D  C F + D      N M      P ++ +  L++   +        + L  +M   G+
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            P++++ + L++C   L + D A  V   +I   L P   TF  ++N LCK      A+ 
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  +   G  P++ TY  +I GLCK G    A  +LK++ ++G  PN +TY+TI+    
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           ++R+    L+I S MK KG + D F Y ++I       + KEA+  + +M +  +  DIV
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           ++N L++  CKEGK+  A  +L  M + G E D  T++ L+ G      +  AR   + M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRL 404
              G   ++ +YN +++   K  +ID A  +F  M       ++ +Y++++H LC+   L
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429

Query: 405 PSASKLL 411
             A  L 
Sbjct: 430 REARNLF 436



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 160/311 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C  ++ ++A A++ +   L ++PD+VT+N+L+D  C+         +L  M E
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTY+SL+ G +  S +  +  L D M+  G  PDV+SYN L++   ++ + DE
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F +MI   LTP   ++N +++GLC+      A  +F+ +  +G +P L TY+IL+ 
Sbjct: 397 AKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLD 456

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G    A  + + +  +   PN + Y  ++    ++   +   ++ S +  KG   
Sbjct: 457 GFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQP 516

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I    K G L EA +    M  DG   D +SYN +I  +        A  L+
Sbjct: 517 NAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576

Query: 311 DEMEKQGFECD 321
            EM  +GF  D
Sbjct: 577 GEMRDKGFIAD 587



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 85/174 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   L +A  +  +    G LP++ TY++L+D +C+   F   + +   M+ 
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P++V YN LI    ++  L  +  L  E+   G+ P+   Y ++++ L + G  DE
Sbjct: 477 TYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDE 536

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           A   F++M      P   ++N+++ G   ++    A+++   ++  GF+ ++ T
Sbjct: 537 ALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 5/174 (2%)

Query: 287 IVSYNTLINLYCKEGKL-EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           I+ +  L++   K G+  +    L  +ME  G   + YT +ILI+       +  A   L
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             + K+G    +  +  +++ L K GK   A+ +F+ M  +    D +TY+++++ LCK 
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               +A+ LL    ++G +        ++D  R      EA  I S +++  IS
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS 270



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 49/111 (44%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           + K +  + NI +   CK+  L  A  +  +    G+ P+   Y  +I+  C+    D  
Sbjct: 478 YSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
                 M E G  PD ++YN +I G   +   S ++ L+ EM + G   DV
Sbjct: 538 LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ V+Y +L+ A C     D    +L  MR AG+  DVVTY +LI G    + +  +++L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + EM E GI P+V  Y+SL+    + G+ ++  +VF +M    + P    +  +++ LCK
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +   + + G  P +VTYN+LI  +CK G ++ A  +LK++ + G AP+ +T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           Y T++K      +    + +L  M R       +   + +VI     IGR+++A      
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G  +++V+YN LI    +  K+  A  L+DEM   G E D +T++ILI G CK   
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSM 394
           +  A   L  M   G +  L  Y  ++  + + G ++ A N+F  M+     D   YS+M
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGV 419
           +H  CKA  L +A +LL S +  G+
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGL 497



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 209/401 (52%), Gaps = 3/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK+ R E    + ++    G+ PDVV Y  LID+ C+       + +++ M   G+ P+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    +   +  ++ +L +M E G+ PDV +YN+L+  L  + + DEA  + +
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+ G   + P   TFN ++ GLC       A ++   +++ G +  LVTYN+LI GL +
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             ++R A  ++ E+   G  P++ TY+ ++K   +  +     ++LS M+ +G   + F 
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++ A  + G ++ A +   +M  +   LD+V+Y+T+I+  CK G L+ A  LL  + 
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   D  T++I+I+   K+G+++ A   L+ M   GF  ++  ++ ++      G+I+
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
             + +   M  K+    S ++  L  +    +  K LL  L
Sbjct: 554 KVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSL 594



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 208/406 (51%), Gaps = 8/406 (1%)

Query: 20  ANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           A+RL      ++  +R  GV  DVVTY  LI   C     D    ++  M E+GI P+VV
Sbjct: 127 ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVV 186

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y+SL+ G  ++        +  EM E GI PDV  Y  L+  L ++GK  +A+ V   M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   L P   T+N+++N +CK      A+ + + + + G  P++VTYN LIKGL     +
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEM 306

Query: 199 RTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             A W+L+E+  G +   PN +T+ ++++      + +   ++ + M+  G   +   Y 
Sbjct: 307 DEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +++ ++++A + M++M + G++ D  +Y+ LI  +CK  +++ A  LL  M  +
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E + + +  L+  +C+ G ++ AR     M+   F  ++ AY+ ++    K G +  A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             + +S+       D+ TYS +++   K+  + +A+ +L     SG
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A  ++KA  ++ +    G+ P+VV Y+ L+  YC+   ++    +   M E GI PD
Sbjct: 160 LCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPD 219

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  LI    +      +  ++D M+  G+ P+V +YN L++C+ + G   EA  V +
Sbjct: 220 VVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLK 279

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNAL----RMFRGLQKHGFVPELVTYNILIKGL 192
            M    + P   T+N ++ GL      D A+     M RG  K+   P +VT+N +I+GL
Sbjct: 280 KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG--KNIVKPNVVTFNSVIQGL 337

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C  GR+R A  +   + ++G   N +TY  ++    R  K +  +E++  M   G   D 
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           F Y  +I  F K+ ++  A D +  M   G++ ++  Y  L+   C++G +E A  L +E
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M+   F  D   ++ +I G CKAG++K A+  L+ +   G   +   Y+ +++   K G 
Sbjct: 458 MDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516

Query: 373 IDHAINVFESM 383
           ++ A  V + M
Sbjct: 517 MEAANGVLKQM 527



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 175/349 (50%), Gaps = 11/349 (3%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  + +KA  ++   +R G+ P+VVTYN+LI+  C+  S      +L +M E G++P
Sbjct: 229 SLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANR 133
           DVVTYN+LI G +    +  ++ LL+EM+     + P+V ++NS++  L  +G+  +A  
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA-- 346

Query: 134 VFQDMICGDLTPCT---ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            FQ     + T C     T+N+++ GL +      A+ +   +   G  P+  TY+ILIK
Sbjct: 347 -FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK  ++  A  +L  + D G  P    Y  ++         +    + + M    +  
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPL 464

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K G LK A + ++ +V +G+  D V+Y+ +IN++ K G +EAA  +L
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNK-IGFDSNL 357
            +M   GF  D      LI G    G I K   L  E + K I  DS +
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKI 573



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 3/313 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   +++A  ++      GV PDVVTYN LI      +  D    +L  M  
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 71  AG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               + P+VVT+NS+I G      +  +  +   M E G   ++ +YN L+  L ++ K 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +  +M    L P + T++I++ G CK    D A  +   ++  G  PEL  Y  L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  +C+ G +  AR +  E+ D+    + + Y+T++    +    K   E+L ++  +G 
Sbjct: 439 LVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           T D   Y  VI  F K G ++ A   ++QM   G   D+  +++LI  Y  +G++     
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 309 LLDEMEKQGFECD 321
           L+ EM  +    D
Sbjct: 558 LIREMITKNIALD 570



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 11/279 (3%)

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYKL 235
           V + V+YN ++  LC+ G    A  +L+ +    H    PNA++YT +M+    +R    
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            + +L +M+  G   D   Y T+I        + +A + M +M   G++ ++V Y++L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            YCK G+ E    +  EM ++G E D   +T LID LCK G  K A   ++ M + G + 
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+  YN +++ + K+G +  AI V + M  K    D  TY++++  L     +  A  LL
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 412 LSCLKSGVRILKS---AQKAVVDGLRHSGCRREAKKIQS 447
              ++ G  I+K       +V+ GL   G  R+A ++++
Sbjct: 314 EEMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC---DKYT 324
           L EAT  ++ + +     D VSYNT++   C+ G  + A  LL  M  +       +  +
Sbjct: 61  LGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---- 380
           +T+L+  LC       A   L  M   G  +++  Y  ++  L    ++D A+ +     
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 381 ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           ES    +   YSS++   CK+ R     K+ +   + G+         ++D L   G  +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 441 EAKKI 445
           +A  +
Sbjct: 238 KAHGV 242


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 4/449 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + ++CK  R+++A  ++ +    G  P+ VTYN+L++   +    +    ++  M  
Sbjct: 219 NTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLN 278

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G++    TYN LI G  +  L   + DL++EM+     P + +YN+LM+ L +  +   
Sbjct: 279 SGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTG 338

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               F DM+    TP   +FN +L G C+      A  +F  L+    VP ++TYN LI 
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G L  A  + KE+ D G  P+  TYT ++  CF+     +     + M  KG   
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T I   +KI     A    E+M+  G   D+++YN  ++  C++G  E A  LL
Sbjct: 459 DRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLL 518

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M   G   D  T+T +I+G  K G+++ AR     M   G   ++  Y  ++      
Sbjct: 519 ENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAK 578

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +D A   F  M  K    +  TY+++++ LC  +R+  A K      + G+   K + 
Sbjct: 579 QMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY 638

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             +++   + G   EA ++  ++   KI 
Sbjct: 639 TILINESCNMGYWEEALRLYREMLDRKIQ 667



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 189/384 (49%), Gaps = 7/384 (1%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  LST   N  +   CK  ++        D ++    PD+V++N L+  YC+       
Sbjct: 317 FPTLST--YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           + + + ++   + P V+TYN+LI G      L  +L L  EM + G+ PD+++Y  L++ 
Sbjct: 375 FLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
            F+LG    A   F +M+   L P    +N  + G  K   T  A  M   +   GF P+
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           ++TYN+ +  LC+ G    A  +L+ +   G  P+ +TYT+I+    +N   +   E+ +
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M  KG       Y  +I A      L  A  Y  +M+   V  ++++YN +IN  C   
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMN-KIGFDSNLEA 359
           +++ AY   DEME++G   +K+++TILI+  C  G  + A RL+ E ++ KI  DS    
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSF--T 672

Query: 360 YNCIVDRLGKDGKIDHAINVFESM 383
           ++  +  L +D ++ HA+   ES+
Sbjct: 673 HSVFLKNLHRDYQV-HAVQCVESL 695



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 187/398 (46%), Gaps = 4/398 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +S    N  +  FC+     +A  ++ + +     P + TYN L+   C++V        
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLR 342

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M ++  +PD+V++NSL+ G  R   +S +  L DE+    + P V +YN+L+H L  
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D A R+ ++M    L P   T+ I++NG  K  Y   A   F  +   G  P+   
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN  I G  K      A  + +E+  +G  P+ ITY   +    +   ++   ++L  M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y ++I  FVK G L++A +   +M++ GV   +V+Y  LI+ +  +  L+
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A++   +M ++    +  T+  +I+GLC    +  A  + + M + G   N  +Y  ++
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +     G  + A+ ++  M  +    DSFT+S  + NL
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 180/387 (46%), Gaps = 6/387 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + ++M   G+ PDV   N ++      +LLS + ++   M + GI P V +YN+++    
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ D+A  +  +M      P   T+N+++NGL K    + A  +   +   G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI-LSA 242
           TYN LI G C+ G    A  +++E+ +    P   TY T+M    +  +   G+ +  S 
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT-GVRLRFSD 345

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M +  +T D   + +++  + + G + EA    +++    +   +++YNTLI+  C  G 
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+AA  L  EM  QG   D +T+TIL++G  K G +  AR     M   G   +  AYN 
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +    K      A ++ E M       D  TY+  VH LC+      A  LL + +  G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKI 445
           +        ++++G   +G  R+A+++
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREV 552



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 4/248 (1%)

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L +F  + ++G +P++   N +++ L     L  A+ +   +   G  P  +TY T++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +  +    LE+LS M+ +G   +   Y  ++    K G L++A   +E+M+  G+ + 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
             +YN LIN +C++G    A+ L++EM  +       T+  L+ GLCK   + G RL   
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 402
            M K  F  ++ ++N ++    + G I  A  +F+ ++ +D      TY++++H LC   
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 403 RLPSASKL 410
            L +A +L
Sbjct: 405 YLDAALRL 412


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 4/449 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + ++CK  R+++A  ++ +    G  P+ VTYN+L++   +    +    ++  M  
Sbjct: 219 NTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLN 278

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G++    TYN LI G  +  L   + DL++EM+     P + +YN+LM+ L +  +   
Sbjct: 279 SGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTG 338

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               F DM+    TP   +FN +L G C+      A  +F  L+    VP ++TYN LI 
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G L  A  + KE+ D G  P+  TYT ++  CF+     +     + M  KG   
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T I   +KI     A    E+M+  G   D+++YN  ++  C++G  E A  LL
Sbjct: 459 DRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLL 518

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M   G   D  T+T +I+G  K G+++ AR     M   G   ++  Y  ++      
Sbjct: 519 ENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAK 578

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +D A   F  M  K    +  TY+++++ LC  +R+  A K      + G+   K + 
Sbjct: 579 QMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY 638

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             +++   + G   EA ++  ++   KI 
Sbjct: 639 TILINESCNMGYWEEALRLYREMLDRKIQ 667



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 189/384 (49%), Gaps = 7/384 (1%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F  LST   N  +   CK  ++        D ++    PD+V++N L+  YC+       
Sbjct: 317 FPTLST--YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           + + + ++   + P V+TYN+LI G      L  +L L  EM + G+ PD+++Y  L++ 
Sbjct: 375 FLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
            F+LG    A   F +M+   L P    +N  + G  K   T  A  M   +   GF P+
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           ++TYN+ +  LC+ G    A  +L+ +   G  P+ +TYT+I+    +N   +   E+ +
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M  KG       Y  +I A      L  A  Y  +M+   V  ++++YN +IN  C   
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMN-KIGFDSNLEA 359
           +++ AY   DEME++G   +K+++TILI+  C  G  + A RL+ E ++ KI  DS    
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSF--T 672

Query: 360 YNCIVDRLGKDGKIDHAINVFESM 383
           ++  +  L +D ++ HA+   ES+
Sbjct: 673 HSVFLKNLHRDYQV-HAVQCVESL 695



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 187/398 (46%), Gaps = 4/398 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +S    N  +  FC+     +A  ++ + +     P + TYN L+   C++V        
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLR 342

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M ++  +PD+V++NSL+ G  R   +S +  L DE+    + P V +YN+L+H L  
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D A R+ ++M    L P   T+ I++NG  K  Y   A   F  +   G  P+   
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN  I G  K      A  + +E+  +G  P+ ITY   +    +   ++   ++L  M 
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y ++I  FVK G L++A +   +M++ GV   +V+Y  LI+ +  +  L+
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A++   +M ++    +  T+  +I+GLC    +  A  + + M + G   N  +Y  ++
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +     G  + A+ ++  M  +    DSFT+S  + NL
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 180/387 (46%), Gaps = 6/387 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + ++M   G+ PDV   N ++      +LLS + ++   M + GI P V +YN+++    
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ D+A  +  +M      P   T+N+++NGL K    + A  +   +   G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI-LSA 242
           TYN LI G C+ G    A  +++E+ +    P   TY T+M    +  +   G+ +  S 
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVT-GVRLRFSD 345

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M +  +T D   + +++  + + G + EA    +++    +   +++YNTLI+  C  G 
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+AA  L  EM  QG   D +T+TIL++G  K G +  AR     M   G   +  AYN 
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +    K      A ++ E M       D  TY+  VH LC+      A  LL + +  G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKI 445
           +        ++++G   +G  R+A+++
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREV 552



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 4/248 (1%)

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L +F  + ++G +P++   N +++ L     L  A+ +   +   G  P  +TY T++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +  +    LE+LS M+ +G   +   Y  ++    K G L++A   +E+M+  G+ + 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
             +YN LIN +C++G    A+ L++EM  +       T+  L+ GLCK   + G RL   
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 402
            M K  F  ++ ++N ++    + G I  A  +F+ ++ +D      TY++++H LC   
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 403 RLPSASKL 410
            L +A +L
Sbjct: 405 YLDAALRL 412


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 211/421 (50%), Gaps = 4/421 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++LG  P +VT + L++ YC          ++++M E G  PD +T+ +LI G   ++  
Sbjct: 71  MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 130

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           S ++ L+D M++ G  P++ +Y  +++ L + G  D A  +   M    +      FN +
Sbjct: 131 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 190

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK R+ D+AL +F+ ++  G  P +VTY+ LI  LC  GR   A  +L ++ +   
Sbjct: 191 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 250

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +T+  ++    +  K+    ++   M ++    D F Y ++I  F    RL +A  
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E MV+     D+ +YNTLI  +CK  ++E    L  EM  +G   D  T+T LI GL 
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSF 389
             G+   A+   + M   G   ++  Y+ ++D L  +GK++ A+ VF+ M   E+K D +
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            Y++M+  +CKA ++     L  S    GV+        ++ GL      +EA  +  K+
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490

Query: 450 R 450
           +
Sbjct: 491 K 491



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 195/379 (51%), Gaps = 4/379 (1%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A++   ++ G  P++VTY ++++  C+    D  + +LN+M  A I  DVV +
Sbjct: 128 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 187

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N++I    +   +  +L+L  EM   GI P+V +Y+SL+ CL   G+  +A+++  DMI 
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TFN +++   K      A ++   + K    P++ TYN LI G C   RL  
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ + + +      P+  TY T++K   ++++ + G E+   M  +G   D   Y T+I 
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                G    A    +QMV+DGV  DI++Y+ L++  C  GKLE A  + D M+K   + 
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D Y +T +I+G+CKAG +         ++  G   N+  YN ++  L     +  A  + 
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487

Query: 381 ESME----VKDSFTYSSMV 395
           + M+    + DS TY++++
Sbjct: 488 KKMKEDGPLPDSGTYNTLI 506



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 187/369 (50%), Gaps = 1/369 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   ++ A  +  +    G+ P+VVTY+ LI   C +  +     +L+ M
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+P++VT+N+LI    +      +  L D+M++  I PD+++YNSL++      + 
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A ++F+ M+  D  P   T+N ++ G CK++  ++   +FR +   G V + VTY  L
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+GL   G    A+ + K++   G  P+ +TY+ ++     N K +  LE+   M++   
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y T+I    K G++ +  D    +   GV+ ++V+YNT+I+  C +  L+ AY 
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL +M++ G   D  T+  LI    + G+   +   +  M    F  +      + + L 
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 544

Query: 369 KDGKIDHAI 377
            DG++D + 
Sbjct: 545 HDGRLDKSF 553



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 191/400 (47%), Gaps = 6/400 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C   R+  A A++   + +G  PD +T+  LI              +++RM + G  P+
Sbjct: 89  YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 148

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY  ++ G  +   +  + +LL++M    I  DV  +N+++  L +    D+A  +F+
Sbjct: 149 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T++ +++ LC      +A ++   + +    P LVT+N LI    K G
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           +   A  +  ++      P+  TY +++   C  +R  K   ++   M  K    D   Y
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AKQMFEFMVSKDCFPDLDTY 327

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F K  R+++ T+   +M   G+  D V+Y TLI     +G  + A  +  +M  
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   D  T++IL+DGLC  G ++ A    +YM K     ++  Y  +++ + K GK+D 
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             ++F S+ +K    +  TY++M+  LC  + L  A  LL
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 109/231 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ R+E    +  +    G++ D VTY  LI         D    +  +M  
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++TY+ L+ G   N  L  +L++ D M +  I  D++ Y +++  + + GK D+
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  +    + P   T+N M++GLC  R    A  + + +++ G +P+  TYN LI+
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              + G    +  +++E+       +A T   +       R  K  L++LS
Sbjct: 508 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 558



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 4/183 (2%)

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G +  IV+ ++L+N YC   ++  A  L+D+M + G+  D  T T LI GL    
Sbjct: 69  KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 128

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A   ++ M + G   NL  Y  +V+ L K G ID A N+   ME      D   ++
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +++ +LCK + +  A  L       G+R       +++  L   G   +A ++ S +   
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 453 KIS 455
           KI+
Sbjct: 249 KIN 251


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 210/448 (46%), Gaps = 37/448 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +     AN LEKA   +     LG++P+VVTYN LI  YC     +    +++ M  
Sbjct: 157 NTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPL 216

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL-------- 122
            G SPD V+Y +++    +N  +   +D++++M +  +  D  +YN+L+H L        
Sbjct: 217 KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADE 276

Query: 123 ------------FQL---------------GKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                       FQ+               G+ D+A  +  +M      P   T+  ++N
Sbjct: 277 ALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIIN 336

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +      A +M + + KHG  P  V+Y   +KGLC+ G    AR ++K   +    P
Sbjct: 337 GFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTP 396

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           NAITY+ +M    R  K     +++  M  KG+         ++ +  +IGR+ EA  +M
Sbjct: 397 NAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFM 456

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+ +  G  ++ V++ T+I+ +C++  +EAA  LLD+M       D  T+T +ID L K 
Sbjct: 457 EECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKK 516

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS--FTYSS 393
           G I+ A      M K G D     Y  ++ R G+ G+++  +N+ + M  +      ++ 
Sbjct: 517 GRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQ 576

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           ++  LC    L +A KLL   L++  RI
Sbjct: 577 VIEKLCTFGNLEAADKLLGKVLRTASRI 604



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 182/382 (47%), Gaps = 4/382 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D + Y +++D   +         +L  M   GI      +  ++   +R   L  ++ +L
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M + GI P++   N+ +H L      ++A R  + M    + P   T+N ++ G C  
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              ++A+ +   +   G  P+ V+Y  ++  LCK  R+R    +++++ D+    + +TY
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T++    +++     L+ L   +++G+  D  GY  ++ ++ K GR+ +A + + +M T
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   D+V+Y  +IN + + G++  A  +L +M K G + +  ++T  + GLC+ GN   
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVH 396
           AR  ++   +  +  N   Y+ ++    ++GK+  A +V   M  K  F        ++ 
Sbjct: 382 AREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQ 441

Query: 397 NLCKAKRLPSASKLLLSCLKSG 418
           +LC+  R+  A K +  CL  G
Sbjct: 442 SLCRIGRVDEAKKFMEECLNMG 463



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 2/367 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V ++CK  R+++A+ I+ +    G +PDVVTY  +I+ + Q         +L +M + G 
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGC 359

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ V+Y + + G  +    S + +++    E    P+  +Y+ +MH   + GK  +A  
Sbjct: 360 KPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACD 419

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V ++MI     P     N++L  LC+    D A +        G     V +  +I   C
Sbjct: 420 VVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFC 479

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +   +  A  +L ++  S   P+A+TYTTI+    +  + +   E+   M +KG      
Sbjct: 480 QQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPV 539

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y TVI  + +IGR+++  + +++M+T   Q    ++N +I   C  G LEAA  LL ++
Sbjct: 540 TYRTVIHRYGQIGRVEDLLNLLDKMLTR--QECRTAFNQVIEKLCTFGNLEAADKLLGKV 597

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +     D  T  +L++   + G    A      M       +L+    +  +L ++GK 
Sbjct: 598 LRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKS 657

Query: 374 DHAINVF 380
           + A N+F
Sbjct: 658 EEADNLF 664



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ + + C+  R+++A+  + + + +G   + V +  +I  +CQ    +A  ++L+ M 
Sbjct: 436 INLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMY 495

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +   PD VTY ++I    +   +  + +L  +ML+ GI P   +Y +++H   Q+G+ +
Sbjct: 496 LSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVE 555

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +   +   M+      C   FN ++  LC
Sbjct: 556 DLLNLLDKMLTRQ--ECRTAFNQVIEKLC 582



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 41/302 (13%)

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L++ +C+    R+A W  K  G   H    +    +          ++ L+      R+ 
Sbjct: 19  LVREICRLIECRSA-WNHKLEGKMRHLLRGLKPRLVCAVLLSQSDERVALDFFFWSDRQW 77

Query: 248 -YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
            Y  D   YC ++    K    + A   +  MV  G+Q     +  ++  Y + GKL  A
Sbjct: 78  RYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNA 137

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV-- 364
             +L  M+K G E +       I  L  A  ++ A   LE M  +G   N+  YNC++  
Sbjct: 138 MQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKG 197

Query: 365 ------------------------DR---------LGKDGKIDHAINVFESME----VKD 387
                                   D+         L K+ +I   ++V E ME    + D
Sbjct: 198 YCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLAD 257

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
             TY++++H LCK +    A + L    K G ++ K    A+VD     G   +AK+I +
Sbjct: 258 QVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVN 317

Query: 448 KI 449
           ++
Sbjct: 318 EM 319


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 211/448 (47%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+VTY+ ++ A C+  + D     L +M  
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD  TYN+LI G +       ++ +  EM    I PDV + N+LM  L + GK  E
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++ IMLNG        +   +F  +   G  P++ T+N+LIK
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 404

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  P+ +TY T++    R  K    +E  + M  +G   
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G L +A + + +++ +G++LDIV + ++IN  CK G++  A  + 
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G   D   + +L+DG C  G ++ A    + M   G + N+  Y  +V+   K 
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  M  K     +  Y+ ++  L +A R   A        +SG+ + K   
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 644

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             V+ GL  + C  EA  +  ++R   +
Sbjct: 645 SIVLRGLFKNRCFDEAIFLFKELRAMNV 672



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 193/425 (45%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  D +  + L+  +C+    D    IL +R  E G 
Sbjct: 123 CT--RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGC 180

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +YN L+           + DLL  M E G    PDV +YN+++   F+ G  ++A
Sbjct: 181 VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T++ +++ LCK R  D A    R +   G +P+  TYN LI G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +   T+M    +  K K   ++   M  KG   D
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  DI ++N LI  Y   G L+ A ++ +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G +    T+  +I  LC+ G +  A      M   G   +  AY+C++      G
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   + S+++NLCK  R+  A  +    +  G+        
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 428 AVVDG 432
            ++DG
Sbjct: 541 MLMDG 545



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 207/447 (46%), Gaps = 39/447 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  + + CK  ++++A  +       G  PDV +Y ++++ Y           + + M 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+PD+ T+N LI       +L  ++ + +EM + G+ P V +Y +++  L ++GK D
Sbjct: 389 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A   F  MI   + P    ++ ++ G C +     A  +   +  +G   ++V +  +I
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSII 508

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GR+  A+ I     + G  P+A+ Y  +M                         
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD------------------------ 544

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               GYC V       G++++A    + MV+ G++ ++V Y TL+N YCK G+++    L
Sbjct: 545 ----GYCLV-------GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM ++G +     + I+IDGL +AG    A++    M + G   N   Y+ ++  L K
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 653

Query: 370 DGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +   D AI +F+   +M VK D  T ++M+  + + +R+  A  L  S  +SG+      
Sbjct: 654 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMA 452
              ++  L   G   EA+ + S ++ A
Sbjct: 714 YSIMITNLLKEGLVEEAEDMFSSMQNA 740



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 7/389 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD- 98
           P   TY +L+D   +    +       ++   G+  D +  + L+ G         +LD 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIMLNG 156
           LL    E+G  PDV+SYN L+  L   GK  +A+ + + M  G    +P    +N +++G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    + A  +F+ + + G  P+LVTY+ ++  LCKA  +  A   L+++ + G  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++       ++K  + +   M+R+    D     T++ +  K G++KEA D  +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   D+ SY  ++N Y  +G L     L D M   G   D YT  +LI      G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A +    M   G   ++  Y  ++  L + GK+D A+  F  M     V D + Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            ++   C    L  A +L+   + +G+R+
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRL 499



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 159/340 (46%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C+  +++ A       I  GV+PD   Y+ LI  +C   S      +++ +   G+
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             D+V + S+I    +   +  + ++ D  + +G+ PD   YN LM     +GK ++A R
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+   + P    +  ++NG CK    D  L +FR + + G  P  + YNI+I GL 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +AGR   A+    E+ +SG A N  TY+ +++  F+NR +   + +   ++      D  
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
              T+IA   +  R++EA D    +   G+    V+Y+ +I    KEG +E A  +   M
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM 737

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +  G E D      ++  L K   I  A  +L  +++  F
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 777



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T+N+LI AY      D    I N MR+ G+ P VVTY ++IA   R   +  +
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++  ++M++ G+ PD ++Y+ L+      G   +A  +  +++   +      F  ++N 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A  +F      G  P+ V YN+L+ G C  G++  A  +   +  +G  PN
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y T++    +  +   GL +   M +KG       Y  +I    + GR   A     
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+ ++  +Y+ ++    K    + A  L  E+     + D  T   +I G+ +  
Sbjct: 631 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 690

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A+     +++ G       Y+ ++  L K+G ++ A ++F SM+      DS   +
Sbjct: 691 RVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLN 750

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 448
            +V  L K   +  A   L    +    +       +VD     G CR + + + +K
Sbjct: 751 HVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 807



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 152/323 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L KA+ +I + +  G+  D+V +  +I+  C+         I +     G+ PD
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V YN L+ G      +  +L + D M+  GI P+V  Y +L++   ++G+ DE   +F+
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P T  +NI+++GL +   T  A   F  + + G      TY+I+++GL K  
Sbjct: 596 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A ++ KEL       + IT  T++   F+ R+ +   ++ +++ R G       Y 
Sbjct: 656 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K G ++EA D    M   G + D    N ++    K+ ++  A   L +++++
Sbjct: 716 IMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775

Query: 317 GFECDKYTHTILIDGLCKAGNIK 339
            F  +  T  +L+D     G  +
Sbjct: 776 NFSLEHLTAMLLVDLFSSKGTCR 798



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 166/384 (43%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P  ++Y  LM C  +  +P+ A   F  ++   L       + +L G C+ + TD AL
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +YNIL+K LC  G+   A  +L+ + + G   +P+ + Y T++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV  GV 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D  +YN LI  Y   G+ + A  +  EM +Q    D      L+  LCK G IK AR  
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 345 LEYMNKIGFDSNLEAYN----------CIVD-------RLGKD----------------- 370
            + M   G + ++ +Y           C+VD        LG                   
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 371 -GKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK    TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEI 492



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 34/244 (13%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P + TY  +M CC R  + +L L     + R G   D      ++  F +  R  EA D
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 274 YMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 330
            +     + G   D+ SYN L+   C +GK   A  LL  M + G  C  D   +  +ID
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G  K G++  A    + M + G   +L                                T
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDL-------------------------------VT 258

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           YSS+VH LCKA+ +  A   L   +  GV         ++ G   +G  +EA ++  ++R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318

Query: 451 MAKI 454
              I
Sbjct: 319 RQSI 322



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L NI +    +A R   A+    +    G+  +  TY++++    +   FD    
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  D++T N++IAG                                   +F
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAG-----------------------------------MF 687

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  + +EA  +F  +    L PC  T++IM+  L K    + A  MF  +Q  G  P+  
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             N +++ L K   +  A   L ++ +   +   +T
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 227/443 (51%), Gaps = 7/443 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+N+++KA  ++   I  G++PD  +Y  L++  C+  +      ++ +M ++G   +
Sbjct: 107 LCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPAN 166

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+L+ G   +  L+ SL  LD +++ G+ P+ ++Y+SL+   ++    +EA R+  
Sbjct: 167 TVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLD 226

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L GLCK    + A+R+F+ L   GF P +V+YNIL++ LC  G
Sbjct: 227 EIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEG 286

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L E+     +P+ +TY  ++     + K +  L+++  M    +      Y 
Sbjct: 287 RWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYN 346

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EK 315
            +IA   K G+++   + ++QM+      +  ++N  I + C EGK++ A+ L+  +  K
Sbjct: 347 PIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNK 405

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           Q      Y   + +  LCK GN   A L L  M K GF  +   Y+ ++  L  +G +  
Sbjct: 406 QNSSIHDYYKGV-VSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYE 464

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+ +F+ +E      D   +++++   CK+ R   + ++    ++ G    ++    +V+
Sbjct: 465 AMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVE 524

Query: 432 GLRHSGCRREAKKIQSKIRMAKI 454
           G+ H   +  A ++  ++ + ++
Sbjct: 525 GIIHEEEKELAAEVLRELHLRQV 547



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 6/333 (1%)

Query: 57  SFDAGYTILNRMREAGISP--DVVTYNSLIAGAT----RNSLLSCSLDLLDEMLEMGIPP 110
           S +  +T +    +  ISP   V+T  +  +G      R+  +S +   L+ +++ G  P
Sbjct: 36  SLNKDFTRVLASTQITISPKDSVITLPNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKP 95

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
           DV     L++ L +  K  +A RV + MI   + P  A++  ++N LCK      A+++ 
Sbjct: 96  DVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLV 155

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
             ++  G+    VTYN L+KGLC  G L  +   L  L   G  PNA TY+++++  ++ 
Sbjct: 156 EKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKE 215

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
           R     + +L  +  KG   +   Y  ++    K GR++EA    + + + G   ++VSY
Sbjct: 216 RGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSY 275

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N L+   C EG+ E A  LL EM  +       T+ ILI  L   G I+ A   ++ M  
Sbjct: 276 NILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMM 335

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             F     +YN I+ RL K+GK++  +N  + M
Sbjct: 336 GPFKPTATSYNPIIARLCKEGKVEAVVNCLDQM 368



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 173/389 (44%), Gaps = 1/389 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L K+   +   ++ G++P+  TY+ L++A  +    +    +L
Sbjct: 166 NTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLL 225

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +   +  ++ L   +   G  P+V SYN L+  L   
Sbjct: 226 DEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYE 285

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EAN +  +M   + +P   T+NI++  L  +   + AL++   +    F P   +Y
Sbjct: 286 GRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSY 345

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LCK G++      L ++     +PN  T+  I   C+   K +    ++ ++  
Sbjct: 346 NPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEG-KVQEAFSLIQSLGN 404

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K  +     Y  V++   K G    A   + +M   G   D  +Y++LI   C EG L  
Sbjct: 405 KQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYE 464

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +   +E+  +  D      LI G CK+     +    E M + G+  +   Y  +V+
Sbjct: 465 AMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVE 524

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            +  + + + A  V   + ++   + S++
Sbjct: 525 GIIHEEEKELAAEVLRELHLRQVMSQSTV 553



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 4/219 (1%)

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A + L+ +  +GH P+ +  T ++    ++ K K  + ++  M   G   D   Y 
Sbjct: 77  RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYT 136

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G +  A   +E+M   G   + V+YNTL+   C  G L  +   LD + ++
Sbjct: 137 FLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQK 196

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   + +T++ L++   K   +  A   L+ +   G   NL +YN ++  L K+G+I+ A
Sbjct: 197 GLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEA 256

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           I +F+++  K    +  +Y+ ++ +LC   R   A++LL
Sbjct: 257 IRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELL 295



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           ++ ++  A+  L+ + K G + D    T L+  LCK+  +K A   +E M   G   +  
Sbjct: 74  RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           +Y  +V+ L K G + +A+ + E ME      ++ TY+++V  LC    L  + + L   
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193

Query: 415 LKSGV 419
           ++ G+
Sbjct: 194 MQKGL 198


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 169/336 (50%), Gaps = 1/336 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA  ++ A+ I+ D +  G +PD  TY+ LI+  C     +    +     E
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G    ++ YN+L+ G ++  L+  +L L+ +M+E G  PD+W+YN +++ L ++G   +
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +  D I     P   TFN +++G CK R  D A+ +   +  HG  P+++TYN L+ 
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA +L       K + + G  PN ITY  +++   ++RK    +E+   MK +G T 
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           D    CT+I      G L +A +    +  +         +N +IN +C++  +  A  L
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKL 624

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
             +M       D YT+ ++ID  CK GNI  A   L
Sbjct: 625 FHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFL 660



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 4/387 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G+ PDV T+ + + ++C      A   +LN M   G   + V+Y ++I+G  + +    
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  L DEML+ GI PD+ ++N L+H L + G   E+ ++F  ++   + P   TFNI + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+    D A R+   +   G  P++++YN LI G CK  +L  A   L ++ +SG  P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TY TI+    +    +   +IL     KG+  D F Y ++I      G +  A    
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            + +  G +  I+ YNTL+    K+G +  A  L+ +M + G   D +T+ ++++GLCK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G +  A   L      G   ++  +N ++D   K   +D AI + ++M       D  TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++++ LCKA++L +      + L+ G
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKG 526



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 198/405 (48%), Gaps = 4/405 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K N   +A  +  + ++ G+ PD++T+N LI   C+  +      + +++ + G+ P+
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + T+N  I G  R   +  +  LL+ ++  G+ PDV SYN+L+    +  K  EA     
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   + P   T+N ++NG CK     NA ++ R     GF+P+  TY+ LI GLC  G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +  E  + G   + I Y T++K   +       L+++  M   G + D + Y 
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            V+    K+G L +A   +   +  G   DI ++NTLI+ YCK+  ++ A  +LD M   
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  L++GLCKA  +       + M + G   N+  YN +++   KD K+  A
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           + +F+ M+ +    D  T  +++  LC    L  A +L ++  K 
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 198/415 (47%), Gaps = 5/415 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C+   +++A  ++   +  G+ PDV++YN LI  +C+          L++M 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G+ P+  TYN++I G  +  ++  +  +L + +  G  PD ++Y+SL++ L   G  +
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  VF + +          +N ++ GL K      AL++ + + +HG  P++ TYN+++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G L  A  IL +    G  P+  T+ T++    + R     +EIL  M   G T
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T++    K  +L    D  + M+  G   +I++YN LI  +CK+ K+  A  L
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             EM+ +G   D  T   LI GLC  G + K   L +    +  F  +   +N +++   
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +   +  A  +F  M       D++TY  M+ + CK   +  A   LL  +  G+
Sbjct: 614 EKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 189/430 (43%), Gaps = 49/430 (11%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           A   +  ++ +++G+ +G++ D          Y +         +  RM      P V +
Sbjct: 64  AEMRKNVDSKMLEGVYIGIMRD----------YGRKGKVQEAVNVFERMDFYDCEPSVQS 113

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN+++         S +  +   M ++GI PDV+++   M      G+P  A R+  +M 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
                    ++  +++G  K      A  +F  + K G  P+++T+N LI  LCK G ++
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            +  +  ++   G  PN  T+   ++                            G C   
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQ----------------------------GLC--- 262

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               + G + EA   +E +V++G+  D++SYNTLI  +CK  KL  A   L +M   G E
Sbjct: 263 ----RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +++T+  +I+G CKAG ++ A   L      GF  +   Y+ +++ L  DG ++ A+ V
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 380 F-ESME--VKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F E+ME   K S   Y+++V  L K   +  A +L+   ++ G          VV+GL  
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 436 SGCRREAKKI 445
            GC  +A  I
Sbjct: 439 MGCLSDANGI 448



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 13/357 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  L N  V    K   + +A  ++ D +  G  PD+ TYN++++  C+         
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ILN     G  PD+ T+N+LI G  +   +  ++++LD ML  GI PDV +YN+L++ L 
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  K D     F+ M+    TP   T+NI++   CK+R    A+ +F+ ++  G  P++V
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILSA 242
           T   LI GLC  G L  A  +   +        +     IM   F  +    +  ++   
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M       D + Y  +I ++ K G +  A  ++ + ++ G+     +   ++N  C   +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 303 LEAAYLLLDEMEKQG---------FECDK---YTHTILIDGLCKAGNIKGARLHLEY 347
           L  A ++++ M + G         FE DK       I+++ L K  +I      L Y
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLY 744


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 206/412 (50%), Gaps = 4/412 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  DV++  +LI+ +C+    D G+++L ++ + G+ P+V+T+++LI G      +  +
Sbjct: 121 GISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRA 180

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L D M+  G  P+V SY+ ++  L ++GK  E  ++ + M      P    +N +++ 
Sbjct: 181 IELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDR 240

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+R  + A+ +F  ++  G +P +VTY  LI GL   GR + A  +L E+      P+
Sbjct: 241 LCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + ++ ++    +  +      IL  M   G   D   Y T++  +     + EA    E
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFE 360

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M++ G   D+ S++ L+N YCK  +++ A  L DEM  +G   D  ++  LI GLC+A 
Sbjct: 361 VMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQAR 420

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
               A    + M+  G+  NL  Y+ ++D L K G +D A+ +F +ME      D  TY+
Sbjct: 421 RPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYN 480

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
            M+  +CK  +   A +L       G++         +DG+   G   EA K
Sbjct: 481 IMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 181/371 (48%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC   ++ +A  +    +  G  P+V +Y+++I   C+         +L  M+  G  PD
Sbjct: 171 FCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPD 230

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN+++    ++ L++ ++ +  +M   GI P V +Y SL+H L  LG+  EA  +  
Sbjct: 231 VVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLN 290

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M  G++ P    F+++++ +CK      A  + + + + G  P++ TYN L+ G C   
Sbjct: 291 EMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRM 350

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  AR + + +   G  P+  +++ ++    + ++     ++   M  +G   D   Y 
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYN 410

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I+   +  R  EA +  + M ++G   ++V+Y+ L++   K+G L+ A  L   ME  
Sbjct: 411 TLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENS 470

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + D  T+ I+IDG+CK G  K AR     ++  G   N       +D + K G +D A
Sbjct: 471 GLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEA 530

Query: 377 INVFESMEVKD 387
              F  ME  D
Sbjct: 531 HKAFRQMEKDD 541



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 194/405 (47%), Gaps = 6/405 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L I +  FC+   ++   +++   I+LG+ P+V+T++ LI+ +C          + + M 
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+V +Y+ +I G  R    +  + LL+ M  +G  PDV  YN+++  L +    +
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M    + P   T+  +++GL        A  +   ++    +P+LV +++LI
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGY 248
             +CK G +  AR ILK + + G  P+  TY T+M   C R    +   ++   M  KG 
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVE-ARKVFEVMISKGR 367

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D F +  ++  + K  R+ EA    ++M   G+  D VSYNTLI+  C+  +   A  
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  +M   G+  +  T++IL+D L K G +  A      M   G   +L  YN ++D + 
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC 487

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
           K GK   A  +F  + VK    +++  +  +  +CK   L  A K
Sbjct: 488 KYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 3/331 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G  PDVV YN ++D  C+    +    I  +M+  GI P VVTY SLI G         
Sbjct: 225 VGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKE 284

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  LL+EM    I PD+ +++ L+  + + G+  EA  + + M    + P  AT+N ++N
Sbjct: 285 AFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMN 344

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C       A ++F  +   G +P++ +++IL+ G CKA R+  A+ +  E+   G  P
Sbjct: 345 GYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIP 404

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y T++    + R+     E+   M   GY  +   Y  ++    K G L +A    
Sbjct: 405 DTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLF 464

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M   G++ D+V+YN +I+  CK GK + A  L  E+  +G + + +  T  IDG+CK 
Sbjct: 465 RAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKG 524

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           G +  A      M K   D    A  CI  R
Sbjct: 525 GLLDEAHKAFRQMEK---DDCSPAQGCINGR 552



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 153/307 (49%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V   CK   + +A  I       G+LP VVTY  LI        +   + +LN M
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +   I PD+V ++ LI    +   +S +  +L  M EMG+ PDV +YN+LM+      + 
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA +VF+ MI     P   +F+I++NG CK +  D A ++F  +   G +P+ V+YN L
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC+A R   A  + K++  +G+ PN +TY+ ++ C  +       + +  AM+  G 
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I    K G+ K+A +   ++   G+Q +       I+  CK G L+ A+ 
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532

Query: 309 LLDEMEK 315
              +MEK
Sbjct: 533 AFRQMEK 539



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 4/361 (1%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           F + +   +  N M      P +V +  L +   R       + L  +M   GI  DV S
Sbjct: 69  FRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
              L++C  +L   D    V   +I   L P   TF+ ++NG C       A+ +F  + 
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G+ P + +Y+I+IKGLC+ G+      +L+ +   G  P+ + Y TI+    ++R   
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             + I   MK  G       Y ++I     +GR KEA   + +M    +  D+V+++ LI
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           ++ CKEG++  A ++L  M + G E D  T+  L++G C    +  AR   E M   G  
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            ++ +++ +V+   K  +ID A  +F+ M     + D+ +Y++++  LC+A+R   A +L
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 411 L 411
            
Sbjct: 429 F 429



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 4/201 (1%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           + +A V++   K      +QM   G+  D++S   LIN +C+   ++  + +L ++ K G
Sbjct: 97  LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E +  T + LI+G C  G I  A    + M   G+  N+ +Y+ I+  L + GK    I
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216

Query: 378 NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            + E M+V     D   Y+++V  LCK + +  A  +      +G+        +++ GL
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276

Query: 434 RHSGCRREAKKIQSKIRMAKI 454
           R+ G  +EA  + ++++   I
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNI 297


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 187/348 (53%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N    A A   + +  G  PDV  +N+L+   C+    +    +   + + G+ P VV
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVV 261

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           ++N+LI G  ++  L     L   M+E  + PDV++Y+ L++ L + G+ D+AN++F +M
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   TF  ++NG C     D  + +++ + + G  P+++TYN LI GLCK G L
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           R A+ ++ E+   G  P+  TYT ++  C +    +  LEI   M ++G   D   +  +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+ F + G++ EA   + +M+  G++ D  +Y  +I+ +CK+G ++  + LL EM+  G 
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
                T+ +L++GLCK G +K A + L+ M  +G   +   YN +++R
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLER 549



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 191/381 (50%), Gaps = 4/381 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + +++L++AY     F         +R+  +     +   L     + +L S +    +E
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +L+ G PPDV  +N LMH L +  K +EA  +F ++    L P   +FN ++NG CK+  
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D   R+ R + ++   P++ TY++LI GLCK G+L  A  +  E+ D G  PN +T+TT
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++       +  LG+EI   M RKG   D   Y T+I    K+G L+EA   + +M   G
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ D  +Y  LI+  CKEG LE+A  +  EM K+G E D    T LI G C+ G +  A 
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 398
             L  M + G   +   Y  ++    K G +     + + M+    V    TY+ +++ L
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515

Query: 399 CKAKRLPSASKLLLSCLKSGV 419
           CK  ++ +A+ LL + L  GV
Sbjct: 516 CKQGQMKNANMLLDAMLNLGV 536



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 4/309 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F++++N    + Y  +A++ FR ++KH       +   L   L K      A    +E+ 
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D G+ P+   +  +M    +  K      +   + ++G       + T+I  + K G L 
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +       M+ + V  D+ +Y+ LIN  CKEG+L+ A  L  EM  +G   +  T T LI
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           +G C  G         + M + G   ++  YN +++ L K G +  A  +   M  +   
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D FTY+ ++   CK   L SA ++    +K G+ +   A  A++ G    G   EA++ 
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457

Query: 446 QSKIRMAKI 454
             ++  A I
Sbjct: 458 LREMLEAGI 466



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FC+  ++ +AE  + + +  G+ PD  TY M+I  +C+      G+ +L  M+  G 
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            P VVTYN L+ G  +   +  +  LLD ML +G+ PD  +YN L+    Q  K
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S ++ +G       +  ++ A+   G   +A      +    +Q+   S   L +   K 
Sbjct: 144 SVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL 203

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
                A+   +E+   G+  D     +L+  LCK   I  A+L    + K G    + ++
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263

Query: 361 NCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++   K G +D    +     E+    D FTYS +++ LCK  +L  A+KL L    
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323

Query: 417 SGV 419
            G+
Sbjct: 324 RGL 326


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 210/453 (46%), Gaps = 40/453 (8%)

Query: 20   ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDV 77
            A R +   A+  + + LG+ P +VTYN L+D++ +    D    +L  M  R +G  P+ 
Sbjct: 1097 AARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPND 1156

Query: 78   VTYNSLIAGATRNSLLSCSLDLLDEM-------------------------------LEM 106
            VTYN +I G TR   L  + +L++ M                               LEM
Sbjct: 1157 VTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM 1216

Query: 107  ---GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
               GI P V +YN+++H L Q G  + A   F +M    L P   T+N +LNG CK    
Sbjct: 1217 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 1276

Query: 164  DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              AL +F  L++ G  P ++TYNILI G C+ G L  AR + +E+G+ G  PN  TYT +
Sbjct: 1277 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 1336

Query: 224  MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            MK     R   +  E    M  KG   D F Y T I A + +G +  A +  E ++ +G+
Sbjct: 1337 MKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGI 1396

Query: 284  QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              D V+YN LI+  CK G L+ A  L  +M   G + D  T+T LI   C+ G ++ AR 
Sbjct: 1397 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 1456

Query: 344  HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
                M   G   +   +  I+    + G +  A   F  M  +    +  TY+ ++H LC
Sbjct: 1457 IFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 1516

Query: 400  KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            +  R   AS      L+ G+   K     ++DG
Sbjct: 1517 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 1549



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 179/383 (46%), Gaps = 39/383 (10%)

Query: 37   GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            G++P VVTYN +I    Q    +A       MR  G+ PDV+TYNSL+ G  +   L  +
Sbjct: 1220 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEA 1279

Query: 97   LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            L L  ++   G+ P V +YN L+    +LG  +EA  + ++M      P   T+ I++ G
Sbjct: 1280 LLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKG 1339

Query: 157  LCKNRYTDNALRMF-----RGLQK------------------------------HGFVPE 181
                R    A   F     +GLQ                                G   +
Sbjct: 1340 SLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSD 1399

Query: 182  LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
             VTYNILI GLCK G L+ A+ +  ++  +G  P+ ITYT ++         +   +I +
Sbjct: 1400 TVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 1459

Query: 242  AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
             M   G       +  +I A+ + G L  A  +  +M+ +GV+ + ++YN LI+  C+ G
Sbjct: 1460 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519

Query: 302  KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAY 360
            + + A     EM ++G   +KYT+T+LIDG CK GN + A R + E M++ G   +   +
Sbjct: 1520 RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE-MHQNGIHPDYLTH 1578

Query: 361  NCIVDRLGKDGKIDHAINVFESM 383
              ++   G DG + H I   +++
Sbjct: 1579 KALLK--GFDGHVHHTIEYLDNV 1599



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 154/316 (48%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            +CKA  L++A  +  D  R G+ P V+TYN+LID YC+    +    +   M E G  P+
Sbjct: 1270 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPN 1329

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V TY  L+ G+     L+ + +  DEML  G+ PD ++YN+ +     LG    A  + +
Sbjct: 1330 VCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELRE 1389

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
             ++   ++  T T+NI+++GLCK     +A  +   +  +G  P+ +TY  LI   C+ G
Sbjct: 1390 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 1449

Query: 197  RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             LR AR I   +   G  P+A+T+T I+    R             M  +G   +   Y 
Sbjct: 1450 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 1509

Query: 257  TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
             +I A  ++GR + A+ +  +M+  G+  +  +Y  LI+  CK G  E A     EM + 
Sbjct: 1510 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 1569

Query: 317  GFECDKYTHTILIDGL 332
            G   D  TH  L+ G 
Sbjct: 1570 GIHPDYLTHKALLKGF 1585



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 7/389 (1%)

Query: 63   TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +    M   G++PDV   N ++      +       + +EMLE+GI P + +YN+L+   
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129

Query: 123  FQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
             + G+ D+   + ++M        P   T+N+++ GL +    + A  +  G++      
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKAS 1189

Query: 181  ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
               TYN LI GL   G ++    +  E+ + G  P  +TY  ++    ++   +      
Sbjct: 1190 SF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248

Query: 241  SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
            + M+  G   D   Y +++  + K G LKEA      +   G+   +++YN LI+ YC+ 
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308

Query: 301  GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            G LE A +L +EM +QG   +  T+TIL+ G     ++  AR   + M   G   +  AY
Sbjct: 1309 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAY 1368

Query: 361  NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
            N  +      G I  A  + E + ++    D+ TY+ ++H LCK   L  A +L +  + 
Sbjct: 1369 NTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 1428

Query: 417  SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +G++        ++      G  REA+KI
Sbjct: 1429 NGLQPDCITYTCLIHAHCERGLLREARKI 1457



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 129/284 (45%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +  +C+   LE+A  +  +    G LP+V TY +L+       S        + M  
Sbjct: 1299 NILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLS 1358

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G+ PD   YN+ I        ++ + +L + ++  GI  D  +YN L+H L + G   +
Sbjct: 1359 KGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKD 1418

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A  +   M+   L P   T+  +++  C+      A ++F  +   G +P  VT+ ++I 
Sbjct: 1419 AKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIH 1478

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              C+ G L +A    +++ + G  PN ITY  ++    R  + +L       M  +G   
Sbjct: 1479 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVA 1538

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
            + + Y  +I    K+G  ++A  +  +M  +G+  D +++  L+
Sbjct: 1539 NKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 93/182 (51%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +   CK   L+ A+ + +  +  G+ PD +TY  LI A+C+         I N M  
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 1463

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G+ P  VT+  +I    R   L  +     +MLE G+ P+  +YN L+H L ++G+   
Sbjct: 1464 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 1523

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A+  F +M+   L     T+ ++++G CK    ++A+R +  + ++G  P+ +T+  L+K
Sbjct: 1524 ASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLK 1583

Query: 191  GL 192
            G 
Sbjct: 1584 GF 1585



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 40/214 (18%)

Query: 276  EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLC 333
            E+M+  G++  IV+YNTL++ + KEG+ +   +LL EME +G  C  +  T+ ++I GL 
Sbjct: 1108 EEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 1167

Query: 334  KAGNIKGARLHLEYMN-----------------------KIGFDSNLE-----------A 359
            + G+++ A   +E M                        K  +D  LE            
Sbjct: 1168 RKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 1227

Query: 360  YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
            YN ++  L + G ++ A   F  M     + D  TY+S+++  CKA  L  A  L     
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287

Query: 416  KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++G+         ++DG    G   EA+ ++ ++
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 196/398 (49%), Gaps = 5/398 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A RL    A     ++ G  P+  TYN LI+A+C+          L RMREAG++PD  
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           TYN L+ G  R  LL+ +  L  +M    G   D +SY  L+  L   G+ D+A RVF  
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M  G   P   T+ ++L+GLCK R    A  +   +   G VP +VTYN LI GLC+ GR
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
                 +L+++    H+P+  TYT ++    ++ K   G ++L     KG   +   Y  
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  + K G +K A D ++ M  + V   + ++N +I+ +C  GK+  A   L +M   G
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              +  T   LI G C  G  K A   L+ M + G   + + Y   +D L  +G+++ A 
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++F  + +K     +  Y+S+VH  C+   + SA  L+
Sbjct: 427 SLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 178/385 (46%), Gaps = 6/385 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+ +AEA++ + +  GV+P+VVTYN LI   CQ   FD    +L +M     SPD
Sbjct: 206 LCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPD 265

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  ++ G  ++  +     +L E +  G+  +V +YN+L++   + G    A  V Q
Sbjct: 266 CWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQ 325

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   TFN +++G C       A+     +   G  P  VT+N LI G C  G
Sbjct: 326 LMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVG 385

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             + A  +L  + + G  P+  TY   +       + +    + S +  KG       Y 
Sbjct: 386 ERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYT 445

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +++  + ++G +  A   ME+M ++    D+ +YNTLI+  CK  +L+ A  LLD+M+KQ
Sbjct: 446 SLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQ 505

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV-----DRLGKDG 371
           G E    T  ILI  +        A    E M   G   + + Y   +     +   K+ 
Sbjct: 506 GIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEE 565

Query: 372 KIDHA-INVFESMEVKDSFTYSSMV 395
            ID A + + E+    D  TY++++
Sbjct: 566 NIDMAVVEMHEAGVFPDVETYNAII 590



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 177/389 (45%), Gaps = 5/389 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC 95
           G+ PD  TYN L+   C+     A   +  +M R  G   D  +Y  LI G      +  
Sbjct: 120 GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDD 179

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  +  +M      P V +Y  L+  L ++ +  EA  +  +M+   + P   T+N ++ 
Sbjct: 180 ACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIG 239

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+    D+  ++   ++     P+  TY  ++ GLCK G++     +L E    G A 
Sbjct: 240 GLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVAL 299

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             +TY  ++    +    K  L++L  MKR         +  VI  F   G++ +A  ++
Sbjct: 300 EVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL 359

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            QM   G+  + V++N+LI+  C  G+ + A  LLD ME+ G   D+ T+ I ID LC  
Sbjct: 360 TQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDE 419

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++ A      +   G  ++   Y  +V    + G ID A  + E M     + D  TY
Sbjct: 420 GQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTY 479

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           ++++  LCK KRL  A  LL    K G+ 
Sbjct: 480 NTLIDGLCKVKRLDRAIDLLDKMKKQGIE 508



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 176/408 (43%), Gaps = 27/408 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   ++ A  ++    R  V P V T+N +I  +C           L +M  
Sbjct: 305 NALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG 364

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG+SP+ VT+NSLI+G         +L LLD M E G+ PD  +Y   +  L   G+ +E
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F  +    +      +  +++G C+    D+A  +   +     +P++ TYN LI 
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  RL  A  +L ++   G  P   T+  ++K    ++K+    ++   M   G   
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKP 544

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYME--QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           D   Y   I+     G  KE    M   +M   GV  D+ +YN +I  Y   G  E A+ 
Sbjct: 545 DKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFF 604

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
              +M     + D  T++IL++ +C   +               FD+         +++ 
Sbjct: 605 AHVKMLSVPIDPDCTTYSILLNYMCNKDDSD------------AFDN---------EKIW 643

Query: 369 KDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLL 412
           K   + +   +FE M   D+     TY +++  LC   RL     LLL
Sbjct: 644 KMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLL 691



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 163/348 (46%), Gaps = 13/348 (3%)

Query: 109 PPDVWSYNSLMHCLFQLGK--PDEANRV--FQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           P DV S+N+ +      G   P  A+ +  F  M+     P   T+N ++N  CK     
Sbjct: 48  PSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTI 223
           +A      +++ G  P+  TYN L+ GLC+AG L  A  +  ++    G   +  +YT +
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           +K      +      + + M R G+   G   Y  ++    K+ R+ EA   + +MV  G
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSR-GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKG 226

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGA 341
           V  ++V+YN LI   C+EG+ +    LL++ME Q    D +T+T ++ GLCK G +  GA
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHN 397
           ++  E + K G    +  YN +++   K G +  A++V + M+   V     T++ ++H 
Sbjct: 287 KVLHEAIGK-GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHG 345

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            C   ++  A   L     +G+        +++ G    G R+ A ++
Sbjct: 346 FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRL 393



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 169/403 (41%), Gaps = 26/403 (6%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   +LE+A ++       G+    V Y  L+  YCQ    D+ + ++ +M      P
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV TYN+LI G  +   L  ++DLLD+M + GI P   ++N L+  +    K  +A +++
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534

Query: 136 QDMICGDLTPCTATFNIMLN-----GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + MI     P   T+ + ++     G  K    D A+     + + G  P++ TYN +IK
Sbjct: 535 EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVE---MHEAGVFPDVETYNAIIK 591

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--C------CFRNRK-YKLG----- 236
               AG    A +   ++      P+  TY+ ++   C       F N K +K+      
Sbjct: 592 AYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNL 651

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            E+   M           Y  ++       RL+E    + +M  + + LD    + L+  
Sbjct: 652 QELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGC 711

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           YC       A      M  Q F+    +  +L+ GLC +G+   A      M  +G++ +
Sbjct: 712 YCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYD 771

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
              +  ++D L + G     + +   M+ K     + TY+S+V
Sbjct: 772 EVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+  G   +  +YNTLIN +CK   L  A   L  M + G   D +T+  L+ GLC+AG 
Sbjct: 81  MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 338 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           +  A  L ++   + G   +  +Y  ++  L   G+ID A  VF  M          TY+
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            ++  LCK +R+  A  LL   +  GV        A++ GL   G   +  K+  K+ + 
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260

Query: 453 KIS 455
           + S
Sbjct: 261 RHS 263



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 99/255 (38%), Gaps = 14/255 (5%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
            T  L I    F  A + E  +  +++    GV PDV TYN +I AY      +  +   
Sbjct: 547 QTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAH 606

Query: 66  NRMREAGISPDVVTYNSLI--------AGATRNSLLSCSLD------LLDEMLEMGIPPD 111
            +M    I PD  TY+ L+        + A  N  +   +D      L ++M E    P 
Sbjct: 607 VKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPG 666

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           + +Y +L+  L    + +E   +   M    +       + +L   C       A   FR
Sbjct: 667 ISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFR 726

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            +    F P L +  +L+ GLC +G    A  I  ++   G+  + + +  ++ C     
Sbjct: 727 SMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKG 786

Query: 232 KYKLGLEILSAMKRK 246
                LE+LS M  K
Sbjct: 787 HAGACLEMLSVMDAK 801


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 204/406 (50%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C   +L+KA  ++      G +P VVTYN +++ YC+   + A   ++++M 
Sbjct: 171 FNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMG 230

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI  D  TYN L+    +N+  +    LL +M +  I P+  +YNS+++   + GK  
Sbjct: 231 SKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIG 290

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A R+FQ+M   +L P   T+N +++G C +   + AL +   ++  G  P  V+Y+ L+
Sbjct: 291 AATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALL 350

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+  +   ++ IL+ +  +G     I YT ++    RN      +++L  M + G  
Sbjct: 351 NGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVV 410

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  +I  F ++G++K   + + +M   G+  + + Y TLI  YCK G +  A+ +
Sbjct: 411 PDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV 470

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M + G++ + +   +L+  LCK G +  A     +M+KIG   N   ++CI++  G 
Sbjct: 471 YVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGN 530

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
            G    A ++F+ M         FTY  ++  LC+A +   A +LL
Sbjct: 531 SGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 229/473 (48%), Gaps = 42/473 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  R + A  +I      G+  D  TYNML+D  C+      GY +L +MR+
Sbjct: 207 NTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRK 266

Query: 71  AGISPDVVTYNSLIAG---------ATR--------NSLLSC------------------ 95
             ISP+ +TYNS+I G         ATR        N L +C                  
Sbjct: 267 RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQ 326

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIML 154
           +L +L+ M   G  P+  SY++L++ L +  K + +  + + M + G +  C A +  M+
Sbjct: 327 ALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIA-YTAMI 385

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLC+N   + ++++   + K G VP++VT+++LI G C+ G+++  + I+ ++  +G A
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLA 445

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN+I YTT++    +        ++  AM R GY  + F    ++++  K G++  A  +
Sbjct: 446 PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYF 505

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M   G   + ++++ +IN Y   G    A+ + DEM K G     +T+  L+  LC+
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
           AG  K A+  L+ ++ I    +   YN I+    K G +  A+ +F+ M     + DS+T
Sbjct: 566 AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCL-KSGVRILKSAQKAVVDGLRHSGCRREA 442
           Y+ +   L +  ++ +A     + L K  V   K      VDGL  +G  + A
Sbjct: 626 YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAA 678



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 205/485 (42%), Gaps = 76/485 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  ++  A  I  +   L +LP+ VTYN LID +C   +F+   TIL  M  
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336

Query: 71  AGISPDVVTYNSL-----------------------------------IAGATRNSLLSC 95
            G  P+ V+Y++L                                   I G  RN LL+ 
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           S+ LLD+ML+ G+ PDV +++ L++   ++GK      +   M    L P +  +  ++ 
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             CK      A +++  + + G+       N+L+  LCK G++  A +    +   G+ P
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N+IT+  I+     +        +   M + G+    F Y  ++ A  + G+ KEA   +
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL------- 328
           +++      +D V+YNT++    K G L  A  L DEM ++    D YT+ I+       
Sbjct: 577 DKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRR 636

Query: 329 -----------------------------IDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
                                        +DGL +AG  K A    E M K G  ++L A
Sbjct: 637 GKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIA 696

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSC 414
            N I++   + GK+  A ++F  M     +  S  TY+ ++H   K K L   S L    
Sbjct: 697 TNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIM 756

Query: 415 LKSGV 419
           +++G+
Sbjct: 757 MRTGI 761



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P V  ++ LI    R  ++  +L+    M   G  P V++ N L+  L +  K      
Sbjct: 97  NPSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F++M+   + P  +TFNI++N LC       A  + + +++ G+VP +VTYN ++   C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A  ++ ++G  G   +A TY  ++    +N +   G  +L  M+++  + +  
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y ++I  FVK G++  AT   ++M    +  + V+YN LI+ +C +G  E A  +L+ M
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E  G + ++ +++ L++GLC+    + ++  LE M   G      AY  ++D L ++G +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394

Query: 374 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + ++ + + M     V D  T+S +++  C+  ++ +  +++    K+G+
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 157/344 (45%), Gaps = 41/344 (11%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P V  ++ L+    + G   +A   F+ M      P   T N++L  L K R        
Sbjct: 98  PSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F+ +      P++ T+NILI  LC  G+L+ A ++LK++ +SG+ P+ +TY         
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYN-------- 207

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
                                      TV+  + K GR K A + ++QM + G++ D  +
Sbjct: 208 ---------------------------TVLNWYCKKGRYKAALELIDQMGSKGIEADACT 240

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           YN L++  CK  +    YLLL +M K+    ++ T+  +I+G  K G I  A    + M+
Sbjct: 241 YNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMS 300

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 405
            +    N   YN ++D    DG  + A+ + E ME      +  +YS++++ LC+  +  
Sbjct: 301 MLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFE 360

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +  +L     +G+ +   A  A++DGL  +G   E+ K+  K+
Sbjct: 361 LSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKM 404



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/516 (21%), Positives = 221/516 (42%), Gaps = 76/516 (14%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N+ V + CK  ++  AE       ++G +P+ +T++ +I+ Y    +    +++ + M +
Sbjct: 487  NVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIK 546

Query: 71   AGISP-----------------------------------DVVTYNSLIAGATRNSLLSC 95
            AG  P                                   D VTYN+++    ++ +L+ 
Sbjct: 547  AGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTD 606

Query: 96   SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIML 154
            ++ L DEM++  + PD ++Y  +   L + GK   A   + +++  G ++P    +   +
Sbjct: 607  AVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFV 666

Query: 155  NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GH 213
            +GL +   +  AL     ++K+G   +L+  N+++ G  + G++  A  I   +      
Sbjct: 667  DGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITI 726

Query: 214  APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            +P+  TY  ++    + +       + + M R G   D     ++I  F K   L     
Sbjct: 727  SPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLK 786

Query: 274  YMEQMVTDGVQLDIVSYNTLINLYCKE---GK---------------------------- 302
             +++M+ DGV +D  ++N LI  YC+    GK                            
Sbjct: 787  LLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLS 846

Query: 303  ----LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
                ++ ++LLL EM ++G   D+  +  L++ +C+ G+I GA    + M  +G  S   
Sbjct: 847  RVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDV 906

Query: 359  AYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSC 414
            A + +V  L K GK++ A  V + M  K       T+++++H  C+ + L  A KL  + 
Sbjct: 907  AESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTM 966

Query: 415  LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                V++   A   ++ GL   G    A K+  +I+
Sbjct: 967  DFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIK 1002



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 20/330 (6%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----------------TY 185
           +L   T   +I  + L + R  +NA  + + L + G   + V                 +
Sbjct: 42  ELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVF 101

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++LI+   + G +  A    + +G  G  P+  T   ++    + RK          M  
Sbjct: 102 DLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLA 161

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +    D   +  +I      G+LK+A   +++M   G    +V+YNT++N YCK+G+ +A
Sbjct: 162 RRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKA 221

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L+D+M  +G E D  T+ +L+D LCK        L L+ M K     N   YN I++
Sbjct: 222 ALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIIN 281

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K+GKI  A  +F+ M     + +  TY++++   C       A  +L     +G + 
Sbjct: 282 GFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKP 341

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            + +  A+++GL        +K I  ++RM
Sbjct: 342 NEVSYSALLNGLCRHAKFELSKSILERMRM 371



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 147/322 (45%), Gaps = 35/322 (10%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +  + K   L K   +    +R G+ PD +T + LI  +C+    D G  +L +M  
Sbjct: 734  NILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLL 793

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G++ D  T+N LI        +  + DL++ M    I PD+ +++S++  L ++    E
Sbjct: 794  DGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            ++ +  +M+     P    +  ++N +C+  +   A ++   ++  G     V  + L++
Sbjct: 854  SHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            GL K G++  A+ +L  +      P   T+TT+M    RN                    
Sbjct: 914  GLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNE------------------- 954

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                      + V+  +LK+  D+ +      V+LD+++YN LI+  C +G + +A  L 
Sbjct: 955  ----------SLVEALKLKDTMDFCD------VKLDVIAYNVLISGLCADGDVASALKLY 998

Query: 311  DEMEKQGFECDKYTHTILIDGL 332
             E++++G   +  T+ ILID +
Sbjct: 999  KEIKQRGLWPNMTTYCILIDAI 1020



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 1/332 (0%)

Query: 37   GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSLLSC 95
            G+  D++  N++++ Y +         I   M     ISP + TYN L+ G  +   LS 
Sbjct: 689  GLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSK 748

Query: 96   SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
              +L + M+  GI PD  + +SL+    +    D   ++ + M+   +     TFN+++ 
Sbjct: 749  CSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIM 808

Query: 156  GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              C+      A  +   +      P++ T++ +I  L +   ++ +  +L E+ + G  P
Sbjct: 809  KYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIP 868

Query: 216  NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
            +   Y  ++    R        ++   M+  G +        ++    K G+++EA   +
Sbjct: 869  DRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVL 928

Query: 276  EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            + M+   +   I ++ TL++++C+   L  A  L D M+    + D   + +LI GLC  
Sbjct: 929  DFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCAD 988

Query: 336  GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            G++  A    + + + G   N+  Y  ++D +
Sbjct: 989  GDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 23/275 (8%)

Query: 198 LRTARWILKELG-DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-------- 248
           L+   W++++ G +  H  + ++ TT      R R Y+    IL  + + G         
Sbjct: 29  LKFLNWVIQQPGLELRHLTHMLSITT--HILVRARLYENAKSILKHLSQMGVGSKSVFGA 86

Query: 249 TFDGFGYCT--------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             + +  C         +I  +++ G + +A +    M   G    + + N L+    KE
Sbjct: 87  LMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKE 146

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            K+ A +L   EM  +    D  T  ILI+ LC  G +K A   L+ M + G+  ++  Y
Sbjct: 147 RKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTY 206

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++   K G+   A+ + + M  K    D+ TY+ +V +LCK  R      LL    K
Sbjct: 207 NTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRK 266

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             +   +    ++++G    G    A +I  ++ M
Sbjct: 267 RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSM 301


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 215/454 (47%), Gaps = 30/454 (6%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C      +L + + I+   I  G  P    +N L+ AYC+   +   Y +L +M + 
Sbjct: 82  ILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQC 141

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQ 124
           G  P  V YN LI G   +       D+LD       EMLE G+  +  + ++   CL  
Sbjct: 142 GCQPGYVVYNILIGGICSSE--EPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCG 199

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +GK ++A  V ++M+     P T+T++ ++  LC     + A ++F+ ++++G  P++  
Sbjct: 200 IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYV 259

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI   CKAG +  AR    E+   G APN +TYT ++    ++RK     E+   M 
Sbjct: 260 YTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-----------------DI 287
            KG T +   Y  +I    K G++++A+   + M  + V++                 ++
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            +Y  L++  CK  +++ A  LL  M  +G E +   +  LIDG CKAG +  A+     
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT 439

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           M + G+D N+  Y+ ++DRL KD ++D A+ V   M       +   Y+ M+  LCK  +
Sbjct: 440 MLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              A KL++   + G         A++DG   SG
Sbjct: 500 TDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSG 533



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 17/385 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + EKA  +I + +  G +PD  TY+ +I   C     +  + +   M+  GI+PD
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPD 256

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V  Y +LI    +   +  + +  DEM   G  P+V +Y +L+H   +  K  +AN V++
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----------------- 179
            M+    TP   T+  +++GLCK    + A ++++ ++K                     
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE 376

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P + TY  L+ GLCKA +++ AR +LK +   G  PN + Y  ++  C +  K     E+
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            + M   GY  + + Y ++I    K  RL  A   + +M+ +    ++V Y  +I+  CK
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GK + AY L+  ME++G   +  T+T +IDG  K+G ++     L+ M+  G   N   
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556

Query: 360 YNCIVDRLGKDGKIDHAINVFESME 384
           Y  +++     G +D A  + E M+
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMK 581



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 202/413 (48%), Gaps = 19/413 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A+++EKA  +  +  R G+ PDV  Y  LID++C+    +      + M   G +P+
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +LI    ++  +S + ++ + ML  G  P++ +Y +L+  L + GK ++A+++++
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 137 DMICGDLT-----------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
            M   ++                  P   T+  +++GLCK      A  + + +   G  
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE 411

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  V Y+ LI G CKAG+L  A+ +   + + G+ PN  TY++++   F++++  L L++
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKV 471

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           LS M       +   Y  +I    K+G+  EA   M  M   G   ++V+Y  +I+ + K
Sbjct: 472 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGK 531

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G++E    LL +M  +G   +  T+ +LI+  C  G +  A   LE M +  +  ++  
Sbjct: 532 SGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAG 591

Query: 360 YNCIVDRLGKD--GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
           Y  +++   ++    +  +  + E+  V  +  Y  ++ N  KA RL  A +L
Sbjct: 592 YRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALEL 644



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 215/491 (43%), Gaps = 64/491 (13%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK+ +  +A +++    +   +PD V Y  +I   C+   F+     L RMR +   P
Sbjct: 19  SLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP 75

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V+TY  L+ G      L     +L  M+  G  P    +NSL+H   + G    A ++ 
Sbjct: 76  NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYT-------------------------------- 163
           + M+     P    +NI++ G+C +                                   
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195

Query: 164 --------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                   + A  + R +   GF+P+  TY+ +I  LC A ++  A  + +E+  +G AP
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +   YTT++    +    +        M+R G   +   Y  +I A++K  ++ +A +  
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--------------- 320
           E M++ G   +IV+Y  LI+  CK GK+E A  +   M+K+  E                
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375

Query: 321 --DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             + +T+  L+DGLCKA  +K AR  L+ M+  G + N   Y+ ++D   K GK+D A  
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF +M       + +TYSS++  L K KRL  A K+L   L++           ++DGL 
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495

Query: 435 HSGCRREAKKI 445
             G   EA K+
Sbjct: 496 KVGKTDEAYKL 506



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 197/467 (42%), Gaps = 61/467 (13%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------------- 49
           S R+ N  V  +C++     A  ++   ++ G  P  V YN+LI                
Sbjct: 111 SPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDL 170

Query: 50  --DAY----------------------CQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
              AY                      C    F+  Y ++  M   G  PD  TY+ +I 
Sbjct: 171 AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
                S +  +  L  EM   GI PDV+ Y +L+    + G  ++A   F +M      P
Sbjct: 231 YLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              T+  +++   K+R    A  ++  +   G  P +VTY  LI GLCKAG++  A  I 
Sbjct: 291 NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIY 350

Query: 206 K-------ELGD----------SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           K       E+ D          + + PN  TY  ++    +  + K   ++L +M  +G 
Sbjct: 351 KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I    K G+L EA +    M+  G   ++ +Y++LI+   K+ +L+ A  
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALK 470

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L +M +     +   +T +IDGLCK G    A   +  M + G + N+  Y  ++D  G
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFG 530

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K G+++  + + + M  K    +  TY  ++++ C    L  A KLL
Sbjct: 531 KSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 27/338 (7%)

Query: 17  FCKANRLEKAEAI-------------------IIDGIRLGVLPDVVTYNMLIDAYCQFVS 57
            CKA ++EKA  I                   ++DG      P+V TY  L+D  C+   
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGA--SNEPNVFTYGALVDGLCKAYQ 394

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
                 +L  M   G  P+ V Y++LI G  +   L  + ++   MLE G  P+V++Y+S
Sbjct: 395 VKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSS 454

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L+  LF+  + D A +V   M+     P    +  M++GLCK   TD A ++   +++ G
Sbjct: 455 LIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG 514

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P +VTY  +I G  K+GR+     +L+++   G APN +TY  ++  C          
Sbjct: 515 CNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAH 574

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS-YNTLINL 296
           ++L  MK+  +     GY  VI  F    R   A+ Y+   +++   + +   Y  LI+ 
Sbjct: 575 KLLEEMKQTYWPRHVAGYRKVIEGF---NREFIASLYLSFEISENDSVPVAPVYRVLIDN 631

Query: 297 YCKEGKLEAAYLLLDEMEK-QGFE-CDKYTHTILIDGL 332
           + K G+LE A  L +E+     F   ++  H  LI+ L
Sbjct: 632 FIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENL 669



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 8/196 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K+ R+EK   ++      G  P+ VTY +LI+  C     D  + +L  M++      
Sbjct: 529 FGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRH 588

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V  Y  +I G  R  + S  L    E+ E    P    Y  L+    + G+ + A  + +
Sbjct: 589 VAGYRKVIEGFNREFIASLYLSF--EISENDSVPVAPVYRVLIDNFIKAGRLEIALELNE 646

Query: 137 DMICGDLTPCTATFN----IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++     +P +A        ++  L      D A  ++  +   G +PEL     LIKGL
Sbjct: 647 EL--SSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGL 704

Query: 193 CKAGRLRTARWILKEL 208
            +  R   A  +L  +
Sbjct: 705 LRVNRWEEALQLLDSI 720


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 232/450 (51%), Gaps = 4/450 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS R  N  +    +   +++ + +  + +   ++P++ T N +++AY +  +      
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            ++++ +AG+SPD  TY SLI G  RN+ ++ +  + + M   G   +  SY +++H L 
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ DE   +F+ M   D  P   T+ ++++ L  N      + +F  +++    P + 
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +++  +CK  +L  +R IL E+ + G  P+ +TY  +++      + +  LEIL  M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +      +   Y  +I  F K   + +A   + +M+   +   +V+YN+LI++ CK G  
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           ++AY LLD +++ G   D++T+++ ID LCK+  ++ A      + + G  +N   Y  +
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535

Query: 364 VDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K GKID AI++ E M  +D    S TY+S+++ +CK  ++     ++ +  K GV
Sbjct: 536 IDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +   +    +++ +   G    A ++ +++
Sbjct: 596 KPTVATYTILIEEMLREGDFDHANRVFNQM 625



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 200/450 (44%), Gaps = 41/450 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V  + K   + +A   +    + G+ PD  TY  LI  YC+    ++ Y + N M 
Sbjct: 217 LNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMP 276

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   + V+Y ++I G      +   + L  +M E    P V +Y  ++H LF   +  
Sbjct: 277 NKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNL 336

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   +F +M      P   T+ +M++ +CK R  D + R+   + + G VP +VTYN LI
Sbjct: 337 EGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK----------------- 232
           +G C+ GR+  A  IL  +  +   PN  TY  ++ C F  RK                 
Sbjct: 397 RGYCEEGRIEAALEILGLMESNNCRPNERTYNELI-CGFSKRKHVHKAMTLLSKMLESKL 455

Query: 233 -------------------YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
                              +    ++L  +K  G   D + Y   I    K  R++EA D
Sbjct: 456 TPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACD 515

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               +   G++ + V Y  LI+ +CK GK++ A  LL+ M  +    +  T+  LI G+C
Sbjct: 516 LFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC 575

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
           K G ++     +E M+K+G    +  Y  +++ + ++G  DHA  VF  M       D +
Sbjct: 576 KEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVY 635

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY++ +H  C +  +  A  ++   +++GV
Sbjct: 636 TYTAFIHTYCTSGNVKEAEGMMARMIEAGV 665



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 173/353 (49%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   CK  +L+++  I+ + +  G++P VVTYN LI  YC+    +A   IL  M   
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
              P+  TYN LI G ++   +  ++ LL +MLE  + P + +YNSL+H   + G  D A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++   +    L P   T+++ ++ LCK++  + A  +F  L++ G     V Y  LI G
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CKAG++  A  +L+ +      PN+ TY +++    +  K + GL ++  M + G    
Sbjct: 539 HCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I   ++ G    A     QMV+ G + D+ +Y   I+ YC  G ++ A  ++ 
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA 658

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            M + G   D  T+T+LI    + G    A   L+ M   G D +   +N ++
Sbjct: 659 RMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 165/344 (47%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V TY +++DA C+    D    ILN M E G+ P VVTYN+LI G      +  +L++
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  M      P+  +YN L+    +     +A  +   M+   LTP   T+N +++  CK
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             + D+A ++   L+++G VP+  TY++ I  LCK+ R+  A  +   L + G   N + 
Sbjct: 472 AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVM 531

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT ++    +  K    + +L  M  +    +   Y ++I    K G+++E    +E M 
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+  + +Y  LI    +EG  + A  + ++M   G + D YT+T  I   C +GN+K
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A   +  M + G   +   Y  ++    + G    A NV + M
Sbjct: 652 EAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRM 695



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 8/291 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N  +C F K   + KA  ++   +   + P +VTYN LI   C+   FD+ Y +L+ 
Sbjct: 425 RTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDL 484

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQL 125
           ++E G+ PD  TY+  I    ++  +  + DL + + E GI  +   Y +L+  HC  + 
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC--KA 542

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK DEA  + + M   D  P ++T+N ++ G+CK       L M   + K G  P + TY
Sbjct: 543 GKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATY 602

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAM 243
            ILI+ + + G    A  +  ++   GH P+  TYT  +   C   N K   G+  ++ M
Sbjct: 603 TILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGM--MARM 660

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              G   D   Y  +I+A+ ++G   +A + +++M+  G       +N LI
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 49/205 (23%)

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDG----VQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           ++I A V +  ++   D++ QM  D      +L + SYN L+ +        A +L++DE
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMML-------ARFLMIDE 197

Query: 313 MEKQGFEC-------DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           M++   E        + YT   +++   K GNI  A L   Y++KI              
Sbjct: 198 MKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL---YVSKI-------------- 240

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
                         F++    DSFTY+S++   C+   + SA K+       G R  + +
Sbjct: 241 --------------FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS 286

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              ++ GL  +G   E   +  K+R
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMR 311


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 214/465 (46%), Gaps = 47/465 (10%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FGK+    +++C+ TF       CK   +++ E ++   I+ GVLP++ TYN+ I   C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           Q    D    ++  + E G  PDV+TYN+LI G  +NS    +   L +M+  G+ PD +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF--- 170
           +YN+L+    + G    A R+  D +     P   T+  +++GLC    T+ AL +F   
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 171 ----------------RGLQKH----------------GFVPELVTYNILIKGLCKAGRL 198
                           +GL                   G +PE+ T+NIL+ GLCK G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  ++K +   G+ P+  T+  ++       K +  LEIL  M   G   D + Y ++
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    K  + ++  +  + MV  G   ++ ++N L+   C+  KL+ A  LL+EM+ +  
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAI 377
             D  T   LIDG CK G++ GA      M +     S+   YN I+    +   +  A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +F+ M  +    D +TY  MV   CK   +    K LL  +++G
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 206/434 (47%), Gaps = 6/434 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   ++ AE I+ D +  G +PD  TY  LID  C     +    + N    
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+V+ YN+LI G +   ++  +  L +EM E G+ P+V ++N L++ L ++G   +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + + MI     P   TFNI+++G       +NAL +   +  +G  P++ TYN L+ 
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  +        K + + G APN  T+  +++   R RK    L +L  MK K    
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           D   + T+I  F K G L  A     +M     V     +YN +I+ + ++  +  A  L
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             EM  +    D YT+ +++DG CK GN+  G +  LE M   GF  +L     +++ L 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN-GFIPSLTTLGRVINCLC 683

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRLPSASKLLLSCLKSGVRILKSAQK 427
            + ++  A  +   M  K        V+ +C   K+  +A KL+L  L     I   A +
Sbjct: 684 VEDRVYEAAGIIHRMVQKG--LVPEAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYE 741

Query: 428 AVVDGLRHSGCRRE 441
            + DGLR    R++
Sbjct: 742 LLFDGLRDKRLRKK 755



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 188/386 (48%), Gaps = 4/386 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV ++ + + ++C+     A   +LN M   G   +VV Y +++ G    +  +  
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L  +ML  G+   + ++N L+  L + G   E  ++   +I   + P   T+N+ + G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+    D A+RM   L + G  P+++TYN LI GLCK  + + A   L ++ + G  P+
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           + TY T++    +    +L   I+      G+  D F Y ++I      G    A     
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + +  G++ +++ YNTLI     +G +  A  L +EM ++G   +  T  IL++GLCK G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A   ++ M   G+  ++  +N ++       K+++A+ + + M       D +TY+
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSG 418
           S+++ LCK  +     +   + ++ G
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKG 526



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 4/398 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V +YN ++        FD  + +  RMR+ GI+PDV ++   +    + S    +L L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M   G   +V +Y +++   ++     E   +F  M+   ++ C +TFN +L  LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                   ++   + K G +P L TYN+ I+GLC+ G L  A  ++  L + G  P+ IT
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    +N K++     L  M  +G   D + Y T+IA + K G ++ A   +   V
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G   D  +Y +LI+  C EG+   A  L +E   +G + +   +  LI GL   G I 
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A      M++ G    ++ +N +V+ L K G +  A  + + M  K    D FT++ ++
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           H      ++ +A ++L   L +GV        ++++GL
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 192/435 (44%), Gaps = 39/435 (8%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS- 74
           +FCK +R   A  ++ +    G   +VV Y  ++  + +      GY +  +M  +G+S 
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214

Query: 75  ----------------------------------PDVVTYNSLIAGATRNSLLSCSLDLL 100
                                             P++ TYN  I G  +   L  ++ ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             ++E G  PDV +YN+L++ L +  K  EA      M+   L P + T+N ++ G CK 
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A R+      +GFVP+  TY  LI GLC  G    A  +  E    G  PN I Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T++K            ++ + M  KG   +   +  ++    K+G + +A   ++ M++
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   DI ++N LI+ Y  + K+E A  +LD M   G + D YT+  L++GLCK    + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
                + M + G   NL  +N +++ L +  K+D A+ + E M+ K    D+ T+ +++ 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 397 NLCKAKRLPSASKLL 411
             CK   L  A  L 
Sbjct: 575 GFCKNGDLDGAYTLF 589



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 14/396 (3%)

Query: 64  ILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHC 121
           + N MR E G    + TY S+I             ++L +M E +G       Y   M  
Sbjct: 26  MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKN 85

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             + GK  EA  VF+ M   D  P   ++N +++ L  + Y D A +++  ++  G  P+
Sbjct: 86  YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + ++ I +K  CK  R   A  +L  +   G   N + Y T++   +       G E+  
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G +     +  ++    K G +KE    +++++  GV  ++ +YN  I   C+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +L+ A  ++  + +QG + D  T+  LI GLCK    + A ++L  M   G + +   YN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 362 CIVDRLGKDGKI--------DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            ++    K G +        D   N F    V D FTY S++  LC       A  L   
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGF----VPDQFTYRSLIDGLCHEGETNRALALFNE 381

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            L  G++        ++ GL + G   EA ++ +++
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 49/106 (46%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   NI +  F +   +  AE +  + +   + PD  TY +++D +C+  + + GY  L
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             M E G  P + T   +I        +  +  ++  M++ G+ P+
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 193/387 (49%), Gaps = 1/387 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FCK  R+E+A +   +  R GV+ +VVT++  +DA+C+         +  +MR 
Sbjct: 268 NALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRM 327

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VTY  L+ G  +   L  +L L +EM++ G+P +V +Y  L+  L + GK  E
Sbjct: 328 KGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAE 387

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF+ M    +      +  +++G    + ++ AL +   ++  G   ++  Y  LI 
Sbjct: 388 AEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIW 447

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   +L  A+ +L ++ + G  PN + YT IM  CF+ RK    + +L  M   G+  
Sbjct: 448 GLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRP 507

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   YC ++    K G + EA  +  +MV  G++ ++ +Y  L++  CK G+L+ A LLL
Sbjct: 508 NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLL 567

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM  +G   D    T L+DG  K GN++ A      M   G   +L  Y C V      
Sbjct: 568 DEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNL 627

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHN 397
             I  A  V   M +++  T  ++V+N
Sbjct: 628 NMIQEAREVLSEM-IENGITPDAVVYN 653



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 218/444 (49%), Gaps = 4/444 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L +A A++     +G  PDVVTYN LID Y +    +    ++  MR
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDVVTYN+L+    +   +  +     EM   G+  +V ++++ +    + G   
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F  M    + P   T+  +++G CK    D+AL +   + + G    +VTY +L+
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLV 376

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G++  A  + + +  +G   N + YTT++   F  +  +  L +LS MK KG  
Sbjct: 377 DGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGME 436

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I     + +L EA   + +M   G++ + V Y  +++   K  K   A  L
Sbjct: 437 LDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIAL 496

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L +M   GF  +  T+  L+DGLCKAG+I  A  H   M  +G + N++AY  +VD L K
Sbjct: 497 LQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCK 556

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G++D A+ + + M  K    D+   +S++    K   L  A  L    + SG+++    
Sbjct: 557 NGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYG 616

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
               V G  +    +EA+++ S++
Sbjct: 617 YTCFVWGFCNLNMIQEAREVLSEM 640



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V T+N++ID  C+         +L RM+  G SPDVVTYNSLI G  +   L     L
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + EM   G  PDV +YN+L++C  + G+ + A   F +M    +     TF+  ++  CK
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N     A+++F  ++  G  P  VTY  L+ G CKAGRL  A  +  E+   G   N +T
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT ++    +  K     ++   M+R G   +   Y T+I         + A   + +M 
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G++LD+  Y  LI   C   KL+ A  LL++M++ G + +   +T ++D   KA    
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A   L+ M   GF  N+  Y  +VD L K G ID AI+ F  M       +   Y+++V
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK  RL  A  LL   +  G+ +      +++DG    G  ++A  +++K+
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 168/369 (45%), Gaps = 39/369 (10%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA RL+ A  +  + ++ GV  +VVTY +L+D  C+         +   M  AGI  + 
Sbjct: 345 CKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANE 404

Query: 78  VTYNSLIAG--ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + Y +LI G    +NS    +L LL EM + G+  DV  Y +L+  L  L K DEA  + 
Sbjct: 405 LLYTTLIHGHFVYKNS--ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M    L P    +  +++   K R    A+ + + +   GF P +VTY  L+ GLCKA
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A     ++ D G  PN   YT ++                             G 
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVD----------------------------GL 554

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           C       K GRL +A   +++M+  G+ LD V   +L++ + K+G L+ A+ L  +M  
Sbjct: 555 C-------KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMIN 607

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + D Y +T  + G C    I+ AR  L  M + G   +   YNC++++  K G ++ 
Sbjct: 608 SGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEE 667

Query: 376 AINVFESME 384
           A  +   ME
Sbjct: 668 AAILQNEME 676



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 188/414 (45%), Gaps = 10/414 (2%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G R   LP VV  + L+         D     L R+RE  + P+  T N ++    R   
Sbjct: 121 GPRRSALPSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARER- 177

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
              S +L   + E    P+V+++N ++  L + G   EA  +   M     +P   T+N 
Sbjct: 178 ---SSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNS 234

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++G  K    +   ++   ++  G  P++VTYN L+   CK GR+  A     E+   G
Sbjct: 235 LIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG 294

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              N +T++T +    +N   +  +++ + M+ KG   +   Y  ++    K GRL +A 
Sbjct: 295 VMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDAL 354

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +MV  GV L++V+Y  L++  CKEGK+  A  +   ME+ G   ++  +T LI G 
Sbjct: 355 VLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGH 414

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDS 388
               N + A   L  M   G + ++  Y  ++  L    K+D A ++   M+      ++
Sbjct: 415 FVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNN 474

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             Y++++    KA++   A  LL   + SG R       A+VDGL  +G   EA
Sbjct: 475 VIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEA 528



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 113/233 (48%), Gaps = 5/233 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   L    +   C   +L++A++++      G+ P+ V Y  ++DA  +         
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M ++G  P++VTY +L+ G  +   +  ++   ++M+++G+ P+V +Y +L+  L 
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ D+A  +  +MI   ++        +++G  K     +A  +   +   G   +L 
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
            Y   + G C    ++ AR +L E+ ++G  P+A+ Y      C  N+  KLG
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYN-----CLINKCQKLG 663



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 8/199 (4%)

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+++     G L +A   + ++    V  +  + N ++    +E   E A+ L +++   
Sbjct: 133 TLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAP 192

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                 +T  I+ID LCK G++  AR  L  M  IG   ++  YN ++D  GK G+++  
Sbjct: 193 NV----FTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEV 248

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +   M       D  TY+++V+  CK  R+  A        + GV          VD 
Sbjct: 249 EKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDA 308

Query: 433 LRHSGCRREAKKIQSKIRM 451
              +G  REA K+ +++RM
Sbjct: 309 FCKNGMVREAMKLFAQMRM 327


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 4/408 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C   ++++A       + LG   D ++Y  LI   C+     A   +L R+    + P+V
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V YN++I    +  L++ + DL  EM+  GI PDV +Y++L+     LGK  +A  +F  
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI  ++ P   TFNI++N  CK+        +F  + K G  P  VTYN L+ G C    
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A+ I   +   G  P+  +Y+ ++    + +K+   + +   M RK    D   Y +
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K GR+  A   ++QM   GV  +I +YN++++  CK  +++ A  LL + + +G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F+ D  T++ILI GLC++G ++ AR   E +   G++ ++ AY  ++     +G  + A+
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            +   ME    + D+ TY  ++ +L K      A KLL   +  G+ +
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPL 573



 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 182/363 (50%), Gaps = 6/363 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   + +A  +  + +  G+ PDVVTY+ LI  +C          + N+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLG 126
               I PDV T+N L+    ++  +     + D M++ GI P+  +YNSLM  +CL +  
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK-- 344

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + ++A  +F  M  G + P   +++IM+NG CK +  D A+ +F+ + +   +P++VTY+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL K+GR+  A  ++ ++ D G  PN  TY +I+    +  +    + +L+  K K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+  D   Y  +I    + G+L++A    E ++  G  LD+ +Y  +I  +C EG    A
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEA 524

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +ME  G   D  T+ I+I  L K      A   L  M   G   N   Y+  + R
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF--YDLYLTR 582

Query: 367 LGK 369
           L +
Sbjct: 583 LAQ 585



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P++V  N+LI+ +CQ       +++  ++ + G  PD +T+ +L  G      +  +
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               D+++ +G   D  SY +L+H L ++G+   A  + Q +    + P    +N +++ 
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK +  + A  +F  +   G  P++VTY+ LI G C  G+L+ A  +  ++      P+
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    ++ K K G  +   M ++G   +   Y +++  +  +  + +A     
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  DI SY+ +IN +CK  K + A  L  EM ++    D  T++ LIDGL K+G
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   ++ M+  G   N+  YN I+D L K  ++D AI +    + K    D  TYS
Sbjct: 415 RISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYS 474

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++  LC++ +L  A K+    L  G  +   A   ++ G    G   EA  + SK+ 
Sbjct: 475 ILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKME 532



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 184/379 (48%), Gaps = 4/379 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   ++ NR+     +P    +N ++    ++      L L  +M   GI P++ + N L
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C  QLG    A  VF  ++     P T TF  +  GLC       A      +   GF
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             + ++Y  LI GLCK G  R A  +L+ +  +   PN + Y TI+    + +      +
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + S M  KG + D   Y  +I+ F  +G+LK+A D   +M+ + ++ D+ ++N L+N +C
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K+GK++    + D M KQG + +  T+  L+DG C    +  A+     M + G + +++
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           +Y+ +++   K  K D A+N+F+ M     + D  TYSS++  L K+ R+  A +L+   
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 415 LKSGVRILKSAQKAVVDGL 433
              GV        +++D L
Sbjct: 427 HDRGVPPNICTYNSILDAL 445



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 193/405 (47%), Gaps = 4/405 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FC+   +  A ++    +++G +PD +T+  L    C        +   +++  
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D ++Y +LI G  +      +LDLL  +    + P+V  YN+++  + ++   +E
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   ++P   T++ +++G C      +A+ +F  +      P++ T+NIL+ 
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G+++  + +   +   G  PN +TY ++M      ++      I + M + G   
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I  F KI +  EA +  ++M    +  D+V+Y++LI+   K G++  A  L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D+M  +G   +  T+  ++D LCK   +  A   L      GF  ++  Y+ ++  L + 
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           GK++ A  VFE + VK    D + Y+ M+   C       A  LL
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 39/363 (10%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SY+S           D+A  +F  ++  + TP    FN +L  L K+++    L + + +
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P LV  NILI   C+ G +  A  +  ++   G+ P+ IT+TT+ K      + 
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR-------------------------- 267
           +        +   G+ FD   Y T+I    K+G                           
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 268 ---------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
                    + EA D   +MV+ G+  D+V+Y+ LI+ +C  GKL+ A  L ++M  +  
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           + D YT  IL++  CK G +K  +   + M K G   N   YN ++D      +++ A +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 379 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +F +M       D  +YS M++  CK K+   A  L     +  +        +++DGL 
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 435 HSG 437
            SG
Sbjct: 412 KSG 414



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 112/243 (46%), Gaps = 4/243 (1%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I+Y++       N      + + + + R+  T   F +  ++ + VK           
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   G++ ++V+ N LIN +C+ G +  A+ +  ++ K G+  D  T T L  GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G I+ A L  + +  +GF  +  +Y  ++  L K G+   A+++ + ++      +   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           ++++ ++CK K +  A  L    +  G+        A++ G    G  ++A  + +K+ +
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 452 AKI 454
             I
Sbjct: 289 ENI 291


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 227/461 (49%), Gaps = 25/461 (5%)

Query: 11  NICVCTFCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           N  V  F +A  ++ AE ++   +DG   G+ P++VT+N +++  C+    +    + + 
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDG---GLKPNLVTFNSMVNGMCKAGKMEDARKVFDE 245

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++PD V+YN+L+ G  +      +L +  EM + GI PDV ++ SL+H + + G 
Sbjct: 246 MMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN 305

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            + A  + + M    L     TF  +++G CK  + D+AL   RG+++    P +V YN 
Sbjct: 306 LEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNA 365

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G C  GR+  AR +L E+   G  P+ +TY+TI+    +N       E+   M  KG
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y ++I    +  RL +A    + M+  G+Q D  +Y +LI+ +CKEG +E A 
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL 485

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSN---------- 356
            L D+M K G   D  T+++LI+GL K+   ++  +L  +  ++    +N          
Sbjct: 486 SLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCC 545

Query: 357 ----LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
               L++   ++      G ++ A  V++SM  +    D   YS ++H  C+A  +  A 
Sbjct: 546 RKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKAL 605

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 L+ G     ++  +++ GL  +G   EA ++  ++
Sbjct: 606 SFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 646



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 206/417 (49%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P V+ YN ++ A     S  +     + M   G++P+V TYN LI           +
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +L +M   G  P+V +YN+L+   F+ G+ D A R+   M+ G L P   TFN M+NG
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK    ++A ++F  + + G  P+ V+YN L+ G CKAG    A  +  E+   G  P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+T+++    +    +  + ++  M+ +G   +   +  +I  F K G L +A   + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M    ++  +V YN LIN YC  G+++ A  LL EME +G + D  T++ +I   CK  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
           +   A    + M + G   +   Y+ ++  L ++ ++  A  +F++M       D FTY+
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           S++   CK   +  A  L    +K+GV         +++GL  S    EA+++  K+
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 5/387 (1%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P V+ YN+++   +  SL S      D ML  G+ P+V++YN L+  L   G   EA
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSAR-RFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + +DM      P   T+N ++    +    D A R+   +   G  P LVT+N ++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           +CKAG++  AR +  E+   G AP+ ++Y T++    +       L + + M +KG   D
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              + ++I    K G L+ A   + QM   G+Q++ V++  LI+ +CK+G L+ A L + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M +   +     +  LI+G C  G +  AR  L  M   G   ++  Y+ I+    K+ 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
               A  + + M  K    D+ TYSS++  LC+ KRL  A  L  + +K G++  +    
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 428 AVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +++DG    G    A  +  K+  A +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGV 496



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 167/358 (46%), Gaps = 27/358 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FCK   L+ A  + + G+R   + P VV YN LI+ YC     D    +L+ M   G+ P
Sbjct: 335 FCKKGFLDDA-LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 393

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTY+++I+   +N     + +L  +MLE G+ PD  +Y+SL+  L +  +  +A+ +F
Sbjct: 394 DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLF 453

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++MI   L P   T+  +++G CK    + AL +   + K G +P++VTY++LI GL K+
Sbjct: 454 KNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKS 513

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-------- 247
            R   A+ +L +L      P    Y  +M CC R  + K  L +L     KG        
Sbjct: 514 ARAMEAQQLLFKLYHEEPIPANTKYDALMHCC-RKAELKSVLALLKGFCMKGLMNEADKV 572

Query: 248 --------YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
                   +  DG  Y  +I    + G + +A  + +QM+  G   +  S  +LI    +
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632

Query: 300 EGKLEAAYLLLDEMEKQGFEC----DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            G +  A    D++ +Q   C    D      LID     GN+      L  M K G 
Sbjct: 633 NGMVVEA----DQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 686



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 19/332 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +  +C   R+++A  ++ +    G+ PDVVTY+ +I AYC+     + + 
Sbjct: 357 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 416

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           +  +M E G+ PD +TY+SLI        LS +  L   M+++G+ PD ++Y SL+  HC
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 476

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP- 180
             + G  + A  +   M+   + P   T+++++NGL K+     A ++   L     +P 
Sbjct: 477 --KEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPA 534

Query: 181 --------------ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
                         EL +   L+KG C  G +  A  + + + D     +   Y+ ++  
Sbjct: 535 NTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 594

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             R       L     M ++G+  +     ++I    + G + EA   ++Q++      D
Sbjct: 595 HCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLAD 654

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
             +   LI+L   EG ++A   +L  M K G 
Sbjct: 655 AEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 686


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 213/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            C+  R+ +A A++   +  G+ P  +TY  ++D  C+     +   +L +M E + I P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I    ++   S + +L  EM E GI PD+++YNS++      G+  +A ++ 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TY+ +I G CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +PN IT+ T++      ++   G+E+L  M   G   D   Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D +++M++ G+  DIV+ +TL++  C  GKL+ A  +   M+K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F+SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 614 ANAITYITLICGFRKVG 630



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 206/430 (47%), Gaps = 15/430 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV Y+ +ID+ C+         +   M+E GI PD+ TYNS+I G   +   S + 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL EMLE  I PDV +YN+L++   + GK  EA  ++ +M+   + P T T++ M++G 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A  MF  +   G  P L+T+N LI G C A R+     +L E+ ++G   + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++   +        L++L  M   G   D     T++      G+LK+A +  + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 278 MVT-----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           M             +GV+ D+ +YN LI+    EGK   A  L +EM  +G   D  T++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGLCK   +  A    + M    F  N+  +  +++   K G++D  + +F  M   
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             V ++ TY +++    K   +  A  +    + SGV       + ++ GL      + A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 443 KKIQSKIRMA 452
             +  K++M+
Sbjct: 671 VAMLEKLQMS 680



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 17/412 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R   A+ +  +    G+ PD+ TYN +I  +C    +     +L  M E  ISP
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI    +      + +L DEML  GI P+  +Y+S++    +  + D A  +F
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M     +P   TFN +++G C  +  D+ + +   + + G V +  TYN LI G    
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------GYT 249
           G L  A  +L+E+  SG  P+ +T  T++     N K K  LE+   M++        + 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 250 FDGF-----GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           F+G       Y  +I+  +  G+  EA +  E+M   G+  D ++Y+++I+  CK+ +L+
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCI 363
            A  + D M  + F  +  T T LI+G CKAG +  G  L  E M + G  +N   Y  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE-MGRRGIVANAITYITL 622

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G I+ A+++F+ M       D+ T  +M+  L   + L  A  +L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 206/455 (45%), Gaps = 51/455 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC  ++L  A +      +LG+ PDVVT+N L+   C          + ++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT+ +L+ G  R   +  ++ LLD M+E G+ P   +Y +++  + ++G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++ LCK+    +A  +F  +Q+ G  P+L TYN +
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A  +L+E+ +   +P+ +TY  ++    +  K+    E+   M  +G 
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A      M T G   +++++NTLI+ YC   +++    
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 309 LLDEMEKQGFECDKYTHTILI-----------------------------------DGLC 333
           LL EM + G   D  T+  LI                                   DGLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 334 KAGNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             G +K A    + M K            G + +++ YN ++  L  +GK   A  ++E 
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           M     V D+ TYSSM+  LCK  RL  A+++  S
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 5/442 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP VV +  L+    +    D   ++  +M    I  D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++  LI      S L  +L    ++ ++G+ PDV ++N+L+H L    +  EA  +F 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+    ++ ++     + + M+ KG   D F Y
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F   GR  +A   +++M+   +  D+V+YN LIN + KEGK   A  L DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T++ +IDG CK   +  A      M   G   NL  +N ++D      +ID 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            + +   M     V D+ TY++++H       L +A  LL   + SG+         ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GLRHSGCRREAKKIQSKIRMAK 453
           GL  +G  ++A ++   ++ +K
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSK 495



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 13/310 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  P+++T+N LID YC     D G  +L+ M E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      L+ +LDLL EM+  G+ PD+ + ++L+  L   GK  +A  +F+
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI+++GL        A  ++  +   G VP+ +TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+TT++    +  +   GLE+   M R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
           +G   +   Y T+I  F K+G +  A D  ++M++ GV  D ++  N L  L+ KE +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELK 668

Query: 305 AAYLLLDEME 314
            A  +L++++
Sbjct: 669 RAVAMLEKLQ 678



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 11/350 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  +  +AE +  + +  G++P+ +TY+ +ID +C+    DA   +   M  
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP+++T+N+LI G      +   ++LL EM E G+  D  +YN+L+H  + +G  + 
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFV 179
           A  + Q+MI   L P   T + +L+GLC N    +AL MF+ +QK           +G  
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNILI GL   G+   A  + +E+   G  P+ ITY++++    +  +     ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +M  K ++ +   + T+I  + K GR+ +  +   +M   G+  + ++Y TLI  + K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            G +  A  +  EM   G   D  T   ++ GL     +K A   LE + 
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +  F     L  A  ++ + I  G+ PD+VT + L+D  C          +  
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 67  RMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
            M+++           G+ PDV TYN LI+G         + +L +EM   GI PD  +Y
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           +S++  L +  + DEA ++F  M     +P   TF  ++NG CK    D+ L +F  + +
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G V   +TY  LI G  K G +  A  I +E+  SG  P+ IT   ++   +   + K 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 236 GLEILSAMK 244
            + +L  ++
Sbjct: 670 AVAMLEKLQ 678



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    M+       +V +  L+ +  +  + +    L  +ME++   
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           CD Y+ TILI   C    +  A      + K+G   ++  +N ++  L  + ++  A+N+
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 380 FESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F  M E     +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 436 SGCRREAKKIQSKIRMAKISH 456
            G    A  +  K  M +ISH
Sbjct: 232 IGDTVSALDLLRK--MEEISH 250


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 196/385 (50%), Gaps = 5/385 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ V+Y +L+ A C     D    +L  MR AG+  DVVTY +LI G    + +  +++L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + EM E GI P+V  Y+SL+    + G+ ++  +VF +M    + P    +  +++ LCK
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +   + + G  P +VTYN+LI  +CK G ++ A  +LK++ + G AP+ +T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           Y T++K      +    + +L  M R       +   + +VI     IGR+++A      
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G  +++V+YN LI    +  K+  A  L+DEM   G E D +T++ILI G CK   
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQ 412

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSM 394
           +  A   L  M   G +  L  Y  ++  + + G ++ A N+F  M+     D   YS+M
Sbjct: 413 VDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGV 419
           +H  CKA  L +A +LL S +  G+
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGL 497



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 209/401 (52%), Gaps = 3/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK+ R E    + ++    G+ PDVV Y  LID+ C+       + +++ M   G+ P+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    +   +  ++ +L +M E G+ PDV +YN+L+  L  + + DEA  + +
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+ G   + P   TFN ++ GLC       A ++   +++ G +  LVTYN+LI GL +
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             ++R A  ++ E+   G  P++ TY+ ++K   +  +     ++LS M+ +G   + F 
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++ A  + G ++ A +   +M  +   LD+V+Y+T+I+  CK G L+ A  LL  + 
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   D  T++I+I+   K+G+++ A   L+ M   GF  ++  ++ ++      G+I+
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
             + +   M  K+    S ++  L  +    +  K LL  L
Sbjct: 554 KVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSL 594



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 208/406 (51%), Gaps = 8/406 (1%)

Query: 20  ANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           A+RL      ++  +R  GV  DVVTY  LI   C     D    ++  M E+GI P+VV
Sbjct: 127 ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVV 186

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y+SL+ G  ++        +  EM E GI PDV  Y  L+  L ++GK  +A+ V   M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   L P   T+N+++N +CK      A+ + + + + G  P++VTYN LIKGL     +
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEM 306

Query: 199 RTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             A W+L+E+  G +   PN +T+ ++++      + +   ++ + M+  G   +   Y 
Sbjct: 307 DEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +++ ++++A + M++M + G++ D  +Y+ LI  +CK  +++ A  LL  M  +
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E + + +  L+  +C+ G ++ AR     M+   F  ++ AY+ ++    K G +  A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             + +S+       D+ TYS +++   K+  + +A+ +L     SG
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A  ++KA  ++ +    G+ P+VV Y+ L+  YC+   ++    +   M E GI PD
Sbjct: 160 LCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPD 219

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  LI    +      +  ++D M+  G+ P+V +YN L++C+ + G   EA  V +
Sbjct: 220 VVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLK 279

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNAL----RMFRGLQKHGFVPELVTYNILIKGL 192
            M    + P   T+N ++ GL      D A+     M RG  K+   P +VT+N +I+GL
Sbjct: 280 KMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG--KNIVKPNVVTFNSVIQGL 337

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C  GR+R A  +   + ++G   N +TY  ++    R  K +  +E++  M   G   D 
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           F Y  +I  F K+ ++  A D +  M   G++ ++  Y  L+   C++G +E A  L +E
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M+   F  D   ++ +I G CKAG++K A+  L+ +   G   +   Y+ +++   K G 
Sbjct: 458 MDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGD 516

Query: 373 IDHAINVFESM 383
           ++ A  V + M
Sbjct: 517 MEAANGVLKQM 527



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 3/313 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK   +++A  ++      GV PDVVTYN LI      +  D    +L  M  
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 71  AG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               + P+VVT+NS+I G      +  +  +   M E G   ++ +YN L+  L ++ K 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +  +M    L P + T++I++ G CK    D A  +   ++  G  PEL  Y  L
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPL 438

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  +C+ G +  AR +  E+ D+    + + Y+T++    +    K   E+L ++  +G 
Sbjct: 439 LVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           T D   Y  VI  F K G ++ A   ++QM   G   D+  +++LI  Y  +G++     
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 309 LLDEMEKQGFECD 321
           L+ EM  +    D
Sbjct: 558 LIREMITKNIALD 570



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 11/279 (3%)

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYKL 235
           V + V+YN ++  LC+ G    A  +L+ +    H    PNA++YT +M+    +R    
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            + +L +M+  G   D   Y T+I        + +A + M +M   G++ ++V Y++L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            YCK G+ E    +  EM ++G E D   +T LID LCK G  K A   ++ M + G + 
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+  YN +++ + K+G +  AI V + M  K    D  TY++++  L     +  A  LL
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 412 LSCLKSGVRILKS---AQKAVVDGLRHSGCRREAKKIQS 447
              ++ G  I+K       +V+ GL   G  R+A ++++
Sbjct: 314 EEMVR-GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC---DKYT 324
           L EAT  ++ + +     D VSYNT++   C+ G  + A  LL  M  +       +  +
Sbjct: 61  LGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---- 380
           +T+L+  LC       A   L  M   G  +++  Y  ++  L    ++D A+ +     
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 381 ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           ES    +   YSS++   CK+ R     K+ +   + G+         ++D L   G  +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 441 EAKKI 445
           +A  +
Sbjct: 238 KAHGV 242


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 215/465 (46%), Gaps = 47/465 (10%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FGK+    +++C+ TF       CK   +++ E ++   I+ GVLP++ TYN  I   C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           Q    DA   ++ R+ + G  PDVVTYN LI G  +NS    +   L +++  G+ PD +
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF--- 170
           +YN+L+    + G    A R+  + +     P   T+  +++GLC    T+ AL +F   
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 171 ----------------RGLQKH----------------GFVPELVTYNILIKGLCKAGRL 198
                           +GL                   G +PE+ T+NIL+ GLCK G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  ++K +   G+ P+  T+  ++       K +  LEIL  M   G   D + Y ++
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSL 502

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    K  + ++  +  + MV  G   ++ ++N L+   C+  KL+ A  LL+EM+ +  
Sbjct: 503 LNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAI 377
             D  T   LIDG CK G++ GA      M ++   S +   YN I+    +   +  A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAE 622

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +F+ M  +    D +TY  MV   CK   +    K LL  +++G
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 204/433 (47%), Gaps = 4/433 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   ++ AE I+++ +  G +PD  TY  LID  C     +    + N    
Sbjct: 325 NTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+V+ YN+LI G +   L+  +  L  EM E G+ P+V ++N L++ L ++G   +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + + MI     P   TFNI+++G       +NAL +   +  +G  P++ TYN L+ 
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLN 504

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  +        K + + G APN  T+  +++   R  K    L +L  MK K    
Sbjct: 505 GLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           D   + T+I  F K G L  A     +M     V     +YN +I+ + ++  +  A  L
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             EM  +    D YT+ +++DG CK GN+  G +  LE M   GF  +L     +++ L 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMEN-GFIPSLTTLGRVINCLC 683

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
            + ++  A  +   M V+      ++       K+  +A KL+L  L     I   A + 
Sbjct: 684 VEDRVYEAAGIIHRM-VQKGLVPEAVNTIFDHDKKEVAAPKLVLEDLLKKSCITYYAYEL 742

Query: 429 VVDGLRHSGCRRE 441
           + DGLR    R++
Sbjct: 743 LFDGLRDKRLRKK 755



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 180/371 (48%), Gaps = 4/371 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV ++ + + ++C+     A   +LN M   G   +VV Y +++ G    +     
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L  +ML  G+   + ++N L+H L + G   E  ++   +I   + P   T+N  + G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+    D A+RM   L   G  P++VTYN LI GLCK  + + A   L +L + G  P+
Sbjct: 261 LCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPD 320

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           + TY T++    +    +L   IL      G+  D F Y ++I      G    A     
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + +  G++ +++ YNTLI     +G +  A  L  EM ++G   +  T  IL++GLCK G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMG 440

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A   ++ M   G+  ++  +N ++       K+++A+ + + M       D +TY+
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYN 500

Query: 393 SMVHNLCKAKR 403
           S+++ LCK  +
Sbjct: 501 SLLNGLCKTSK 511



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 191/398 (47%), Gaps = 4/398 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V +YN ++        FD  + +  RMR+ GI+PDV ++   +    R S    +L L
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M   G   +V +Y +++   ++    DE   +F  M+   ++ C +TFN +L+ LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                   ++   + K G +P L TYN  I+GLC+ G L  A  ++  L D G  P+ +T
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVT 288

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    +N K++     L  +  +G   D F Y T+IA + K G ++ A   +   V
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAV 348

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G   D  +Y +LI+  C EG+   A  L +E   +G + +   +  LI GL   G I 
Sbjct: 349 FNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLIL 408

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A      M++ G    ++ +N +V+ L K G +  A  + + M  K    D FT++ ++
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           H      ++ +A ++L   + +GV        ++++GL
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGL 506



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 192/435 (44%), Gaps = 39/435 (8%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS- 74
           +FC+ +R   A  ++ +    G   +VV Y  ++  + +    D GY +  +M  +G+S 
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214

Query: 75  ----------------------------------PDVVTYNSLIAGATRNSLLSCSLDLL 100
                                             P++ TYN  I G  +   L  ++ ++
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             +++ G  PDV +YN L++ L +  K  EA      ++   L P + T+N ++ G CK 
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKG 334

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A R+      +GFVP+  TY  LI GLC  G    A  +  E    G  PN I Y
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T++K            ++ S M  KG   +   +  ++    K+G + +A   ++ M++
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   DI ++N LI+ Y  + K+E A  +LD M   G + D YT+  L++GLCK    + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
                + M + G   NL  +N +++ L +  K+D A+ + E M+ K    D+ T+ +++ 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 397 NLCKAKRLPSASKLL 411
             CK   L  A  L 
Sbjct: 575 GFCKNGDLDGAYTLF 589



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 20/399 (5%)

Query: 64  ILNRMR-EAGISPDVVTYNSLIAG--------ATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           + N MR E G    + TY S+I          A    L+    ++ + MLE G+      
Sbjct: 26  MFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLE-GV------ 78

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y   M    + GK  EA  VF+ M   D  P   ++N +++ L  + Y D A +++  ++
Sbjct: 79  YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G  P++ ++ I +K  C+  R   A  +L  +   G   N + Y T++   +      
Sbjct: 139 DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKD 198

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
            G E+   M   G +     +  ++    K G +KE    +++++  GV  ++ +YN  I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
              C++G+L+AA  ++  +  QG + D  T+  LI GLCK    + A ++L  +   G +
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318

Query: 355 SNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
            +   YN ++    K G +  A    +N   +  V D FTY S++  LC       A  L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               L  G++        ++ GL + G   EA ++ S++
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 49/106 (46%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   NI +  F +   +  AE +  + +   + PD  TY +++D +C+  + D GY  L
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFL 660

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
             M E G  P + T   +I        +  +  ++  M++ G+ P+
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 206/430 (47%), Gaps = 15/430 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV Y+ +ID+ C+         +   M+E GI PD+ TYNS+I G   +   S + 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL EMLE  I PDV +YN+L++   + GK  EA  ++ +M+   + P T T++ M++G 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A  MF  +   G  P L+T+N LI G C A R+     +L E+ ++G   + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++   +        L++L  M   G   D     T++      G+LK+A +  + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 278 MVT-----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           M             +GV+ D+ +YN LI+    EGK   A  L +EM  +G   D  T++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGLCK   +  A    + M    F  N+  +  +++   K G++D  + +F  M   
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             V ++ TY +++    K   +  A  +    + SGV       + ++ GL      + A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 443 KKIQSKIRMA 452
             +  K++M+
Sbjct: 671 VAMLEKLQMS 680



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P  +TY  ++D  C+     +   +L +M E   I P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I    ++   S + +L  EM E GI PD+++YNS++      G+  +A ++ 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TY+ +I G CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +PN IT+ T++      ++   G+E+L  M   G   D   Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D +++M++ G+  DIV+ +TL++  C  GKL+ A  +   M+K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F+SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 614 ANAITYITLICGFRKVG 630



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 17/412 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R   A+ +  +    G+ PD+ TYN +I  +C    +     +L  M E  ISP
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI    +      + +L DEML  GI P+  +Y+S++    +  + D A  +F
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M     +P   TFN +++G C  +  D+ + +   + + G V +  TYN LI G    
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------GYT 249
           G L  A  +L+E+  SG  P+ +T  T++     N K K  LE+   M++        + 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 250 FDGF-----GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           F+G       Y  +I+  +  G+  EA +  E+M   G+  D ++Y+++I+  CK+ +L+
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCI 363
            A  + D M  + F  +  T T LI+G CKAG +  G  L  E M + G  +N   Y  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE-MGRRGIVANAITYITL 622

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G I+ A+++F+ M       D+ T  +M+  L   + L  A  +L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 204/455 (44%), Gaps = 51/455 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC  ++L  A +      +LG+ PDVVT+  L+   C            ++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT+ +L+ G  R   +  ++ LLD M+E G+ P   +Y +++  + + G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++ LCK+    +A  +F  +Q+ G  P+L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A  +L+E+ +   +P+ +TY  ++    +  K+    E+   M  +G 
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A      M T G   +++++NTLI+ YC   +++    
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 309 LLDEMEKQGFECDKYTHTILI-----------------------------------DGLC 333
           LL EM + G   D  T+  LI                                   DGLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 334 KAGNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             G +K A    + M K            G + +++ YN ++  L  +GK   A  ++E 
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           M     V D+ TYSSM+  LCK  RL  A+++  S
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 208/442 (47%), Gaps = 5/442 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP VV +  L+    +    D   ++  +M    I  D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++N LI      S L  +L    ++ ++G+ PDV ++ +L+H L    +  EA   F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+    ++ ++     + + M+ KG   D F Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F   GR  +A   +++M+   +  D+V+YN LIN + KEGK   A  L DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T++ +IDG CK   +  A      M   G   NL  +N ++D      +ID 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            + +   M     V D+ TY++++H       L +A  LL   + SG+         ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GLRHSGCRREAKKIQSKIRMAK 453
           GL  +G  ++A ++   ++ +K
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSK 495



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 13/310 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  P+++T+N LID YC     D G  +L+ M E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      L+ +LDLL EM+  G+ PD+ + ++L+  L   GK  +A  +F+
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI+++GL        A  ++  +   G VP+ +TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+TT++    +  +   GLE+   M R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
           +G   +   Y T+I  F K+G +  A D  ++M++ GV  D ++  N L  L+ KE +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELK 668

Query: 305 AAYLLLDEME 314
            A  +L++++
Sbjct: 669 RAVAMLEKLQ 678



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 11/350 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  +  +AE +  + +  G++P+ +TY+ +ID +C+    DA   +   M  
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP+++T+N+LI G      +   ++LL EM E G+  D  +YN+L+H  + +G  + 
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFV 179
           A  + Q+MI   L P   T + +L+GLC N    +AL MF+ +QK           +G  
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNILI GL   G+   A  + +E+   G  P+ ITY++++    +  +     ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +M  K ++ +   + T+I  + K GR+ +  +   +M   G+  + ++Y TLI  + K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            G +  A  +  EM   G   D  T   ++ GL     +K A   LE + 
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +  F     L  A  ++ + I  G+ PD+VT + L+D  C          +  
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 67  RMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
            M+++           G+ PDV TYN LI+G         + +L +EM   GI PD  +Y
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           +S++  L +  + DEA ++F  M     +P   TF  ++NG CK    D+ L +F  + +
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G V   +TY  LI G  K G +  A  I +E+  SG  P+ IT   ++   +   + K 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 236 GLEILSAMK 244
            + +L  ++
Sbjct: 670 AVAMLEKLQ 678



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 92/201 (45%), Gaps = 6/201 (2%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    M+       +V +  L+ +  +  + +    L  +ME++   
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN- 378
           CD Y+  ILI   C    +  A      + K+G   ++  +  ++  L  + ++  A++ 
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 379 ---VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
              +FE+    +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 436 SGCRREAKKIQSKIRMAKISH 456
            G    A  +  K  M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 206/420 (49%), Gaps = 12/420 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            NI V    K+ R+E+A  I          LP+VVTY  +I+  C+    D    +L+ M
Sbjct: 103 FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G  P+V+TY+ L+ G  +         LL EM   G  PDV  YN+L++ L +  + 
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  + Q MI     P   T+N ++   C+++  D A R+ + + + G  P+++ YN +
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTV 282

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR------NRKYKLGLEILSA 242
           I GLC+  RL  A+ +LK++  +   P+ ITY+TI+    +      + K +   EIL  
Sbjct: 283 IAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEM 342

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK+ G   +   Y  VI    +  + ++A   + +M+   V  D+ S++ +I   CK   
Sbjct: 343 MKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+AAY +   M ++  + +   +  LIDGL K G +  A    E M +  F   +  YN 
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNS 461

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++D L   G+I+ A+ + E M  K+ F    +Y +++  LC+   +  A +L  +    G
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 11/410 (2%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +P+  TY  LI   C+    D  Y +L+ MR+ GI P V  +N +I G  +      +L 
Sbjct: 27  VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGL 157
               +      PD+ ++N L+  L + G+ +EA ++F+ M       P   T+  ++NGL
Sbjct: 87  YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+   D A+ +   + + G  P ++TY++L++GLCKAGR      +L+E+   G  P+ 
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           I Y T++    ++R+    LE++  M R G       Y +++  F +  ++  A   ++ 
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G   D+++YNT+I   C++ +L+ A  LL +M       D  T++ +IDGLCK   
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326

Query: 338 I------KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 387
           +      + A   LE M + G   N   Y  +++ L +  K   A+ +   M     V D
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             ++S ++ +LCK+  L +A K+     +   +    A  A++DGL   G
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 187/362 (51%), Gaps = 11/362 (3%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           RE    P+  TY SLI G  +   L  + +LLDEM + GIPP V  +N ++  L + G+ 
Sbjct: 22  REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRF 81

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 187
            +A   F+ +     TP   TFNI+++ L K+   + A ++F  +      +P +VTY  
Sbjct: 82  GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G+L  A  +L  + ++G  PN ITY+ +++   +  +   G  +L  M R+G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D   Y T++    K  RL EA + ++ M+  G    +V+YN+L+ L+C+  +++ A+
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+  M ++G   D   +  +I GLC+   +  A+  L+ M       ++  Y+ I+D L
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 368 GKDGKID------HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            KD ++D       A  + E M+      ++ TY+ ++  LC+A++   A  LL   + S
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 418 GV 419
            V
Sbjct: 382 EV 383



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 219/451 (48%), Gaps = 24/451 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA +L++A  ++ +    G+ P V  +N +I   C+   F         +     +PD
Sbjct: 40  LCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPD 99

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEM-LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++T+N L+    ++  +  +  + + M       P+V +Y ++++ L + GK D A  + 
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M      P   T+++++ GLCK   TD    + + + + GF P+++ YN L+ GLCK+
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +++ +  SG  P  +TY ++M+   R+++      ++  M  +G   D   Y
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------EGKLEAAYLL 309
            TVIA   +  RL +A   ++QMV      D+++Y+T+I+  CK      + KLEAA  +
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M++ G   +  T+ ++I+GLC+A   + A   L  M       +L +++ ++  L K
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 370 DGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASK---LLLSCLKSGVRIL 422
              +D A  +F  M  ++       Y++++  L K   +  A +   L++   + GV   
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATY 459

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            S    V+DGL   G      +I+  +RM +
Sbjct: 460 NS----VLDGLCGVG------RIEEAVRMVE 480



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 7/331 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ RL++A  ++   IR G  P VVTYN L++ +C+    D  + ++  M E G  PD
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD------E 130
           V+ YN++IAG  R++ L  +  LL +M+     PDV +Y++++  L +  + D       
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M      P   T+ +++ GLC+ R +  AL + R +     VP+L +++++I 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+  L  A  I   + +    PN + Y  ++    +  +    + +   M  + +  
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRP 454

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +V+     +GR++EA   +E M+      D  SY  LI   C+   +E AY L 
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
             +E +GF  +   + +L++ LCK   +  A
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 109/197 (55%), Gaps = 1/197 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A + ++A A++   I   V+PD+ +++M+I + C+    DA Y I   M E    P+
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y +LI G ++   +  ++ + + M+E    P V +YNS++  L  +G+ +EA R+ +
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVE 480

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI  +  P  A++  ++ GLC+    + A  +F+ ++  GF  E+  YN+L+  LCK  
Sbjct: 481 GMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK 540

Query: 197 RLRTARWILKELGDSGH 213
           RL  A  +  +L ++G+
Sbjct: 541 RLSDAHGVANKLIEAGY 557



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 42/283 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY------TI 64
           N  +   C+  RL+ A+A++   +    +PDV+TY+ +ID  C+    DA +       I
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS---------- 114
           L  M++ G  P+  TY  +I G  R      +L LL  M++  + PD+ S          
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 115 -------------------------YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                                    Y +L+  L + G+ D+A RVF+ M+     P  AT
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVAT 458

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N +L+GLC     + A+RM  G+      P+  +Y  LI+GLC+   +  A  + + + 
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
             G A     Y  ++    + ++      + + +   GY   G
Sbjct: 519 AKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQG 561


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 222/450 (49%), Gaps = 4/450 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+   LNI V   CK  + E     + D    GV  D+VTYN LI+AYC+    +  + 
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +LN     G+ P ++TYN+++ G  +      + D+L EML++G+ P+  +YN+L+  + 
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +     EA  +F +M    + P   +F+ ++  L +N +   AL  FR +++ G VP+ V
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y ILI G C+ G L  A  +  E+   G   + +TY T +    + + +     + + M
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D + + T+I  + K G + +A +  E MV   ++ D V+YNTLI+ +CK G++
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L D+M ++    D  ++  +++G C +G +  A    + M + G   NL   N +
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    + G +  A      M     + DSF+Y++++    K   L  A  L+    K G+
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +        +++G    G  +EA+++  K+
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKM 703



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 200/403 (49%), Gaps = 4/403 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+  +V T N++++A C+   F+     L+ M   G+  D+VTYN+LI    R  L+
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  LL+     G+ P + +YN++++ L ++GK D A  V  +M+   LTP  AT+N +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  +C+      A  +F  + + G +P+LV+++ LI  L + G L  A    +E+  SG 
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ + YT ++    RN      L++   M  +G   D   Y T +    K     +A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV  G+  D  ++ TLI  YCK+G ++ A  L + M +   + DK T+  LIDG C
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           KAG +  A+   + M +     +  +Y  +++     G +  A+N+ + M  K    +  
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           T ++++   C++  +P A + L   + +G+     +   ++DG
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 169/317 (53%), Gaps = 1/317 (0%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R G++PD V Y +LID +C+  +      + + M   G   DVVTYN+ + G  +  + +
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L +EM+E G+ PD +++ +L+    + G  D+A  +F+ M+  +L P   T+N ++
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G CK      A  ++  + +   +P+ ++Y  ++ G C +G L  A  +  ++ + G  
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +T  T++K   R+       E LS M   G   D F Y T+I  ++K   L++A   
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M   G+Q +I++YN ++N +C EGK++ A  +L +M + G   D  T++ LI+G   
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 335 AGNIKGA-RLHLEYMNK 350
             N+K A R H E + +
Sbjct: 725 QDNMKEAFRFHDEMLQR 741



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 206/446 (46%), Gaps = 6/446 (1%)

Query: 9   LLNICVCTFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + ++ V T+ +A +L E +EA  I   R GV   +   N L+    +    D  + I   
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILR-RKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +   GI  +V T N ++    ++      +  L +M   G+  D+ +YN+L++   + G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA ++        + P   T+N +L GLCK    D A  +   + + G  P   TYN 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+  +C+   +  A+ I  E+   G  P+ +++++++    RN      L     M+R G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  F + G L +A    ++M+  G  +D+V+YNT +N  CK+     A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +L +EM ++G   D YT T LI G CK GN+  A    E M +     +   YN ++D  
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K G++  A  +++ M     + D  +Y ++++  C +  LP A  L    L+ G+R   
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKI 449
                ++ G   SG   +A +  SK+
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKM 633



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 158/310 (50%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+   L  A  +  + +  G   DVVTYN  ++  C+   F     + N M E 
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ PD  T+ +LI G  ++  +  +L+L + M+   + PD  +YN+L+    + G+   A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ DMI  D+ P   ++  +LNG C +     AL +   + + G  P LVT N LIKG
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C++G +  A   L ++  +G  P++ +Y T++    +    +    +++ M+++G  F+
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F   G+++EA   + +M+  G+  D  +Y++LIN +  +  ++ A+   D
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHD 736

Query: 312 EMEKQGFECD 321
           EM ++G   D
Sbjct: 737 EMLQRGLVPD 746



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y  +++   + +K + G E    ++RKG +        ++   V+ G +  A +   
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++V  G++L++ + N ++N  CK+ K E     L +ME +G   D  T+  LI+  C+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            ++ A   L   +  G +  L  YN I+  L K GK D A +V   M       ++ TY+
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +++  +C+   +  A ++     + GV
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGV 393



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 12/202 (5%)

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
           G  Y  ++  +V+  +L+E ++  + +   GV + I + N L+    + G ++ A+ +  
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           E+ + G E + YT  I+++ LCK    +     L  M   G  +++  YN +++   ++G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 372 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            ++ A  +  S   +       TY+++++ LCK  +   A  +L+  L+ G+    +   
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGL----TPNA 362

Query: 428 AVVDGLRHSGCRR----EAKKI 445
           A  + L    CRR    EA++I
Sbjct: 363 ATYNTLLVEICRRDNILEAQEI 384


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 222/450 (49%), Gaps = 4/450 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+   LNI V   CK  + E     + D    GV  D+VTYN LI+AYC+    +  + 
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +LN     G+ P ++TYN+++ G  +      + D+L EML++G+ P+  +YN+L+  + 
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +     EA  +F +M    + P   +F+ ++  L +N +   AL  FR +++ G VP+ V
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y ILI G C+ G L  A  +  E+   G   + +TY T +    + + +     + + M
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D + + T+I  + K G + +A +  E MV   ++ D V+YNTLI+ +CK G++
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L D+M ++    D  ++  +++G C +G +  A    + M + G   NL   N +
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    + G +  A      M     + DSF+Y++++    K   L  A  L+    K G+
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +        +++G    G  +EA+++  K+
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKM 703



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 200/403 (49%), Gaps = 4/403 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+  +V T N++++A C+   F+     L+ M   G+  D+VTYN+LI    R  L+
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  LL+     G+ P + +YN++++ L ++GK D A  V  +M+   LTP  AT+N +
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  +C+      A  +F  + + G +P+LV+++ LI  L + G L  A    +E+  SG 
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ + YT ++    RN      L++   M  +G   D   Y T +    K     +A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV  G+  D  ++ TLI  YCK+G ++ A  L + M +   + DK T+  LIDG C
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           KAG +  A+   + M +     +  +Y  +++     G +  A+N+ + M  K    +  
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           T ++++   C++  +P A + L   + +G+     +   ++DG
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 169/317 (53%), Gaps = 1/317 (0%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R G++PD V Y +LID +C+  +      + + M   G   DVVTYN+ + G  +  + +
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L +EM+E G+ PD +++ +L+    + G  D+A  +F+ M+  +L P   T+N ++
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G CK      A  ++  + +   +P+ ++Y  ++ G C +G L  A  +  ++ + G  
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +T  T++K   R+       E LS M   G   D F Y T+I  ++K   L++A   
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M   G+Q +I++YN ++N +C EGK++ A  +L +M + G   D  T++ LI+G   
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 335 AGNIKGA-RLHLEYMNK 350
             N+K A R H E + +
Sbjct: 725 QDNMKEAFRFHDEMLQR 741



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 206/446 (46%), Gaps = 6/446 (1%)

Query: 9   LLNICVCTFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + ++ V T+ +A +L E +EA  I   R GV   +   N L+    +    D  + I   
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILR-RKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +   GI  +V T N ++    ++      +  L +M   G+  D+ +YN+L++   + G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA ++        + P   T+N +L GLCK    D A  +   + + G  P   TYN 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+  +C+   +  A+ I  E+   G  P+ +++++++    RN      L     M+R G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  F + G L +A    ++M+  G  +D+V+YNT +N  CK+     A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +L +EM ++G   D YT T LI G CK GN+  A    E M +     +   YN ++D  
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K G++  A  +++ M     + D  +Y ++++  C +  LP A  L    L+ G+R   
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKI 449
                ++ G   SG   +A +  SK+
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKM 633



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 158/310 (50%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+   L  A  +  + +  G   DVVTYN  ++  C+   F     + N M E 
Sbjct: 437 ILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER 496

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ PD  T+ +LI G  ++  +  +L+L + M+   + PD  +YN+L+    + G+   A
Sbjct: 497 GMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRA 556

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ DMI  D+ P   ++  +LNG C +     AL +   + + G  P LVT N LIKG
Sbjct: 557 KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKG 616

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C++G +  A   L ++  +G  P++ +Y T++    +    +    +++ M+++G  F+
Sbjct: 617 YCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFN 676

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++  F   G+++EA   + +M+  G+  D  +Y++LIN +  +  ++ A+   D
Sbjct: 677 IITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHD 736

Query: 312 EMEKQGFECD 321
           EM ++G   D
Sbjct: 737 EMLQRGLVPD 746



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y  +++   + +K + G E    ++RKG +        ++   V+ G +  A +   
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++V  G++L++ + N ++N  CK+ K E     L +ME +G   D  T+  LI+  C+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            ++ A   L   +  G +  L  YN I+  L K GK D A +V   M       ++ TY+
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +++  +C+   +  A ++     + GV
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGV 393



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 12/202 (5%)

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
           G  Y  ++  +V+  +L+E ++  + +   GV + I + N L+    + G ++ A+ +  
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           E+ + G E + YT  I+++ LCK    +     L  M   G  +++  YN +++   ++G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 372 KIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            ++ A  +  S   +       TY+++++ LCK  +   A  +L+  L+ G+    +   
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGL----TPNA 362

Query: 428 AVVDGLRHSGCRR----EAKKI 445
           A  + L    CRR    EA++I
Sbjct: 363 ATYNTLLVEICRRDNILEAQEI 384


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 221/479 (46%), Gaps = 40/479 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  + + +R E A A+    +R G+ PDV +YN LID + +    D  Y +  +M E
Sbjct: 126 NILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIE 185

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPDVVTYNSLI G  +   +  S  +L++M++ GI P+  +YNSL++     G   E
Sbjct: 186 QSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKE 245

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + RVF++M    L PC    N  ++ LC++     A  +F  +   G  P +++Y+ L+ 
Sbjct: 246 SVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLH 305

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G       ++  +   G  PN   +  ++    R       + I   M+ KG   
Sbjct: 306 GYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIP 365

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL----------------------DIV 288
           D   + TVI++  +IGRL +A      MV  GV                        +++
Sbjct: 366 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELI 425

Query: 289 S--------------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           S              ++++IN   KEG++     ++D M + G   +  T   L++G C 
Sbjct: 426 SEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCL 485

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            GN++ A   L+ M  IG + N   Y  +VD   K+G+ID A+ VF  M  K     S  
Sbjct: 486 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 545

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+ ++H L +A+R  +A K+    ++SG  +       V+ GL  + C  EA  +  K+
Sbjct: 546 YNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 604



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 214/496 (43%), Gaps = 47/496 (9%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FG+L    L   VC+       F K   ++KA  +    I   V PDVVTYN LID  C
Sbjct: 144 VFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLC 203

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         +L +M +AGI P+  TYNSLI G +   +   S+ +  EM   G+ P V 
Sbjct: 204 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 263

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTP----------------CTAT-------- 149
           + NS +H L +  +  EA  +F  M+     P                C A         
Sbjct: 264 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 150 -----------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                      FNI++N   +    D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL
Sbjct: 324 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 383

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CT 257
             A      + D G  P+   Y  +++ C  + +     E++S M  K     G  Y  +
Sbjct: 384 DDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 443

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K GR+ E  D M+ MV  G + ++V++N+L+  YC  G +E A+ LLD M   G
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E + Y +  L+DG CK G I  A      M   G       YN I+  L +  +   A 
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAK 563

Query: 378 NVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +F    ES       TY  ++  LC+      A+ LL       V+        V+  +
Sbjct: 564 KMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623

Query: 434 RHSGCRREAKKIQSKI 449
              G R+EAK++ + I
Sbjct: 624 LKVGRRQEAKELFAAI 639



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 5/355 (1%)

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           A  +P + TYN LI    R      +L +   +L  G+ PDV SYN+L+    + G+ D+
Sbjct: 116 AADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDK 175

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  MI   ++P   T+N +++GLCK +    + R+   +   G  P   TYN LI 
Sbjct: 176 AYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIY 235

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   AG  + +  + KE+  SG  P  +   + +    R+ + K   +I  +M  KG   
Sbjct: 236 GYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP 295

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T++  +   G        +  MV+ G+  +   +N LIN Y + G ++ A L+ 
Sbjct: 296 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 355

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++M+ +G   D  T   +I  LC+ G +  A     +M  IG   +   Y C++      
Sbjct: 356 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNH 415

Query: 371 GKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           G++  A  +   M  KD        +SS+++NL K  R+     ++   +++G R
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR 470



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 161/372 (43%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ LF+ G
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + A  +   +   G  P    Y 
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+  A  + +++   G  P ++ Y  I+   F+ R+     ++   M   
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T     Y  V+    +     EA   +E++    V+ DI+++N +I+   K G+ + A
Sbjct: 573 GTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEA 632

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L   +   G     +T+ ++I  L K  + + A      + K G   +    N IV  
Sbjct: 633 KELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRM 692

Query: 367 LGKDGKIDHAIN 378
           L K  ++  A N
Sbjct: 693 LLKKAEVAKASN 704



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 142/284 (50%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+ + + I+   ++ G  P+VVT+N L++ YC   + +  + +L+ M   GI P+  
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 509

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y +L+ G  +N  +  +L +  +ML  G+ P    YN ++H LFQ  +   A ++F +M
Sbjct: 510 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM 569

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I    T    T+ ++L GLC+N  TD A  +   L       +++T+NI+I  + K GR 
Sbjct: 570 IESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRR 629

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A+ +   +   G  P   TY  ++    +   Y+    +  ++++ G   D      +
Sbjct: 630 QEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHI 689

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   +K   + +A++Y+  +  + + L+  + + L +L+ +EGK
Sbjct: 690 VRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGK 733



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 8/419 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P+   +N+LI+AY +    D    I   M+  G+ PD VT+ ++I+   R   L  +
Sbjct: 327 GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 386

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT-FNIMLN 155
           L   + M+++G+PP    Y  L+      G+  +A  +  +M+  D+ P     F+ ++N
Sbjct: 387 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 446

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L K         +   + + G  P +VT+N L++G C  G +  A  +L  +   G  P
Sbjct: 447 NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEP 506

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y T++    +N +    L +   M  KG       Y  ++    +  R   A    
Sbjct: 507 NCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMF 566

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A +LL+++     + D  T  I+I  + K 
Sbjct: 567 HEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKV 626

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G  + A+     ++  G    +  YN ++  L K+   + A N+F S+E      DS   
Sbjct: 627 GRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLL 686

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL--RHSGCRREAKKIQSK 448
           + +V  L K   +  AS   LS +      L+++  +++  L  R   CR   K + +K
Sbjct: 687 NHIVRMLLKKAEVAKASN-YLSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPAK 744



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 160/366 (43%), Gaps = 36/366 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTY-NMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C    L KA+ +I + +   + P  V Y + +I+   +      G  I++ M + G  P+
Sbjct: 413 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPN 472

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+NSL+ G      +  +  LLD M  +GI P+ + Y +L+    + G+ D+A  VF+
Sbjct: 473 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 532

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   + P +  +NI+L+GL + R T  A +MF  + + G    + TY +++ GLC+  
Sbjct: 533 DMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNN 592

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +                                LE L AM  K   FD   + 
Sbjct: 593 CTDEANML--------------------------------LEKLFAMNVK---FDIITFN 617

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI+A +K+GR +EA +    + T G+   + +YN +I+   KE   E A  L   +EK 
Sbjct: 618 IVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKS 677

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D      ++  L K   +  A  +L  +++          + +     ++GK    
Sbjct: 678 GRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREH 737

Query: 377 INVFES 382
           I +  +
Sbjct: 738 IKLLPA 743



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 107/226 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  R++ A  +  D +  GV P  V YN+++    Q     A   + + M E+G +  
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVS 577

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY  ++ G  RN+    +  LL+++  M +  D+ ++N ++  + ++G+  EA  +F 
Sbjct: 578 IQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFA 637

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    L P   T+N+M++ L K    + A  +F  ++K G  P+    N +++ L K  
Sbjct: 638 AISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKA 697

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +  A   L  + ++     A T + +     R  K +  +++L A
Sbjct: 698 EVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPA 743


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 224/458 (48%), Gaps = 19/458 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  F +A  ++ AE ++      G+ P++VT+N +++  C+    +    + + M  
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD V+YN+L+ G  +      +L +  EM + GI PDV ++ SL+H + + G  + 
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M    L     TF  +++G CK  + D+AL   RG+++    P +V YN LI 
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  GR+  AR +L E+   G  P+ +TY+TI+    +N       E+   M  KG   
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I       RL +A    + M+  G+Q D  +Y +LI+ +CKEG +E+A  L 
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFDSNLEA-YNC---- 362
           D+M K G   D  T+++LI+GL K+     A+     L + + I  ++  +A  +C    
Sbjct: 529 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA 588

Query: 363 -------IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
                  ++      G ++ A  V++SM  +    D   YS ++H  C+A  +  A    
Sbjct: 589 ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 648

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              L+ G     ++  +++ GL  +G   EA ++  ++
Sbjct: 649 KQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 205/417 (49%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P V+ YN ++ A     S  +     + M   G++P+V TYN L+           +
Sbjct: 151 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +L +M   G  P+V +YN+L+   F+ G+ D A R+   M  G L P   TFN M+NG
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK    ++A ++F  + + G  P+ V+YN L+ G CKAG    A  +  E+   G  P+
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+T+++    +    +  + ++  M+ +G   +   +  +I  F K G L +A   + 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M    ++  +V YN LIN YC  G+++ A  LL EME +G + D  T++ +I   CK  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
           +   A    + M + G   +   Y+ ++  L  + ++  A  +F++M       D FTY+
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           S++   CK   + SA  L    +K+GV         +++GL  S    EA+++  K+
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 187/387 (48%), Gaps = 5/387 (1%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P V+ YN+++   +  SL S      D ML  G+ P+V++YN L+  L   G   EA
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSAR-RFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             + +DM      P   T+N ++    +    D A R+   +++ G  P LVT+N ++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           +CKAG++  AR +  E+   G AP+ ++Y T++    +       L + + M +KG   D
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              + ++I    K G L+ A   + QM   G+Q++ V++  LI+ +CK+G L+ A L + 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M++   +     +  LI+G C  G +  AR  L  M   G   ++  Y+ I+    K+ 
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
               A  + + M  K    D+ TYSS++  LC  KRL  A  L  + +K G++  +    
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 428 AVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +++DG    G    A  +  K+  A +
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGV 536



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 162/353 (45%), Gaps = 17/353 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   L+ A   +    +  + P VV YN LI+ YC     D    +L+ M   G+ PD
Sbjct: 375 FCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 434

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+++I+   +N     + +L  +MLE G+ PD  +Y+SL+  L    +  +A+ +F+
Sbjct: 435 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFK 494

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   L P   T+  +++G CK    ++AL +   + K G +P++VTY++LI GL K+ 
Sbjct: 495 NMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 554

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--------- 247
           R   A+ +L +L      P    Y  +M CC R  + K  L +L     KG         
Sbjct: 555 RAMEAQQLLFKLYHEDPIPANTKYDALMHCC-RKAELKSVLALLKGFCMKGLMNEADKVY 613

Query: 248 -------YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                  +  DG  Y  +I    + G + +A  + +QM+  G   +  S  +LI    + 
Sbjct: 614 QSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFEN 673

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           G +  A  ++ ++       D      LID     GN+      L  M K G 
Sbjct: 674 GMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 726



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 19/332 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +  +C   R+++A  ++ +    G+ PDVVTY+ +I AYC+     + + 
Sbjct: 397 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 456

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           +  +M E G+ PD +TY+SLI        LS +  L   M+++G+ PD ++Y SL+  HC
Sbjct: 457 LNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 516

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP- 180
             + G  + A  +   M+   + P   T+++++NGL K+     A ++   L     +P 
Sbjct: 517 --KEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPA 574

Query: 181 --------------ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
                         EL +   L+KG C  G +  A  + + + D     +   Y+ ++  
Sbjct: 575 NTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHG 634

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             R       L     M + G+  +     ++I    + G + EA   ++Q++      D
Sbjct: 635 HCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLAD 694

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
             +   LI+L   EG ++A   +L  M K G 
Sbjct: 695 AEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 726


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 227/446 (50%), Gaps = 6/446 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  +L  A  I  D  R G+ P+V+T N++ID  C+    +   +I   M +
Sbjct: 408 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 467

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +P+ VT++SLI G  +   +  +  L ++ML+ G  P    Y SL+   F+ G+ ++
Sbjct: 468 KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKED 527

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            ++++++M+    +P     N  ++ + K   T+    +FR +  HGF+P+  +Y+ILI 
Sbjct: 528 GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIH 587

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG       +   + + G   +   Y  ++    ++ K     ++L  MK KG+  
Sbjct: 588 GLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 647

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +VI    KI RL EA    E+  ++G++L++V Y++LI+ + K G+++ AYL++
Sbjct: 648 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 707

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ ++G   + YT   L+D L KA  I  A +  + M  +    N   Y+ +++ L + 
Sbjct: 708 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 767

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            K + A   ++ M+      ++ TY++M+  L KA  +  AS  L S  K+   I  SA 
Sbjct: 768 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG-LFSRFKANGGIPDSAS 826

Query: 427 -KAVVDGLRHSGCRREAKKIQSKIRM 451
             A+++GL  +    +A  +  + R+
Sbjct: 827 YNAMIEGLSSANKAMDAYALFEETRL 852



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 219/511 (42%), Gaps = 75/511 (14%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKANRL++A  +     +   +P    YN +I  Y     FD  Y +L R +  G 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V+ YN ++    +   +  +L + +EM    +P +V +YN L+  L + GK + A  
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALE 425

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  DM    L P   T NIM++ LCK +  + A  +F G+      P  VT++ LI GL 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           K GR+  A  + +++ D GH P AI YT                                
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  +   +   G+  D   Y  +I   VK G   E  +    M
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 605

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG--------------------- 317
              G  LD  +YN +I+ +CK GK+  AY LL+EM+ +G                     
Sbjct: 606 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 665

Query: 318 ------FECDK--------YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                 FE  K          ++ LIDG  K G I  A L +E + + G   N+  +NC+
Sbjct: 666 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 725

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K  +I+ A+  F+SM+      +  TYS +++ LC+ ++   A        K G+
Sbjct: 726 LDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGL 785

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +        ++ GL  +G   EA  + S+ +
Sbjct: 786 KPNTITYTTMISGLAKAGNILEASGLFSRFK 816



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 186/418 (44%), Gaps = 44/418 (10%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +S  L+  CV    K+ +L +A  II    +    P    Y +LI A  +    D    +
Sbjct: 162 ISIELVANCV----KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLIL 217

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            ++M+E G   +V  + +LI    R   +  +L LLDEM    +  D+  YN  + C  +
Sbjct: 218 FHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGK 277

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK D + + F +M    L P   T+  M+  LCK    D A+ +F  L+++  VP    
Sbjct: 278 AGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA 337

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I G   AG+   A  +L+     G  P+ I Y  I+ C  + R+ +  L I   MK
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           R                                   D V  ++ +YN LI++ C+EGKL 
Sbjct: 398 R-----------------------------------DAVP-NVPTYNILIDMLCREGKLN 421

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           AA  + D+ME+ G   +  T  I+ID LCKA  ++ A    E M+      N   ++ ++
Sbjct: 422 AALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 481

Query: 365 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D LGK G++D A +++E M     V  +  Y+S++ +  K  R     K+    + +G
Sbjct: 482 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 1/321 (0%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           C F KA   EK  A+  +    G +PD  +Y++LI    +    +  Y +   M+E G  
Sbjct: 553 CVF-KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 611

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
            D   YN++I G  ++  ++ +  LL+EM   G PP V +Y S++  L ++ + DEA  +
Sbjct: 612 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 671

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F++     +      ++ +++G  K    D A  +   L + G  P + T+N L+  L K
Sbjct: 672 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 731

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           A  +  A    + + D    PN ITY+ ++    R RK+         M++ G   +   
Sbjct: 732 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 791

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I+   K G + EA+    +   +G   D  SYN +I       K   AY L +E  
Sbjct: 792 YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 851

Query: 315 KQGFECDKYTHTILIDGLCKA 335
            +G      T  +L+D L KA
Sbjct: 852 LKGCNIHTKTCVVLLDALHKA 872



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 115/221 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  +  FCK+ ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 612 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 671

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +VV Y+SLI G  +   +  +  +++E+++ G+ P+V+++N L+  L +
Sbjct: 672 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 731

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M      P   T++I++NGLC+ R  + A   ++ +QK G  P  +T
Sbjct: 732 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 791

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL KAG +  A  +      +G  P++ +Y  +++
Sbjct: 792 YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 832



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 5/298 (1%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRG 172
           +YNSL+  + +  + D   R+ ++M      P ++  +I L   C K+R    A  + + 
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGP-SSNISIELVANCVKSRKLREAFDIIQT 185

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++K  F P    Y ILI  L +         +  ++ + G+  N   +TT+++   R  +
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L +L  MK      D   Y   I  F K G++  +  +  +M + G+  D V+Y +
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I + CK  +L+ A  L +++E+       Y +  +I G   AG    A   LE     G
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSA 407
              ++ AYNCI+  LGK  +++ A+ +FE M+   V +  TY+ ++  LC+  +L +A
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAA 423



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 3/214 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+  + +  +  F K  R+++A  I+ + ++ G+ P+V T+N L+DA  +    +    
Sbjct: 681 KLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 740

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M++    P+ +TY+ LI G  R    + +     EM ++G+ P+  +Y +++  L 
Sbjct: 741 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLA 800

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   EA+ +F         P +A++N M+ GL       +A  +F   +  G      
Sbjct: 801 KAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 860

Query: 184 TYNILIKGLCKAGRLRTAR---WILKELGDSGHA 214
           T  +L+  L KA  L  A     +LKE   S HA
Sbjct: 861 TCVVLLDALHKAECLEQAAIVGAVLKETAKSQHA 894


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 204/413 (49%), Gaps = 4/413 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ VC +C+   L++A  +I    R  +LP V TYNML++ +C     D  + I + M +
Sbjct: 287 NMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEK 346

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDVVTYN+LI G ++    S    L++EM + G+  +  +YN ++  + + G   E
Sbjct: 347 MNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTE 406

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      M    L+P   T+N ++   CK      A RM   +   G   +  T N ++ 
Sbjct: 407 ATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILH 466

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC   +L  A  +L      G+  + ++Y  ++   F++ K    L +   MK +    
Sbjct: 467 CLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMP 526

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +VI    +  ++ +A D + +M+ +G+  D  +YN +I+ +C EG +E A+   
Sbjct: 527 STITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFH 586

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM +  F+ D YT  IL+ GLC+ G ++ A      +   G D ++  YN I+  L K+
Sbjct: 587 NEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKE 646

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           GK ++A ++   ME K    D +TY  ++  L  A R+  A +  L  ++SG+
Sbjct: 647 GKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 218/435 (50%), Gaps = 7/435 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA---GY 62
           S  LL+  +  + + ++   A  I     RL   P+++T N L+++  ++ S  +     
Sbjct: 139 SKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLAR 198

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L    + G+ P+  ++N LI G    S +  +LD +++M E G  PD  SYN+++  L
Sbjct: 199 QVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDAL 258

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +     EA  +  DM    L+P   T+N+++ G C+      A ++   + ++  +P +
Sbjct: 259 LKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTV 318

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            TYN+L+ G C  G++  A  I  E+      P+ +TY T++  C + R       ++  
Sbjct: 319 WTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M +KG   +   Y  ++    K G + EAT  +++M  +G+  D V+YNTLI  YCK GK
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A+ ++DEM  +G + D +T   ++  LC    +  A   L   +K G+  +  +Y  
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++    KD K D A+N+++ M+    +  + TY+S++  LC+++++  A   L   L++G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 419 VRILKSAQKAVVDGL 433
           +   ++    ++ G 
Sbjct: 559 LVPDETTYNIIIHGF 573



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 211/460 (45%), Gaps = 47/460 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY-------- 62
           N+ V  FC   ++++A  I  +  ++ VLPDVVTYN LID   Q+      Y        
Sbjct: 322 NMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDK 381

Query: 63  ---------------------------TILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
                                      T L++M E G+SPD VTYN+LI    +   +  
Sbjct: 382 KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGK 441

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  ++DEM   G+  D W+ N+++HCL    K DEA  +              ++ I++ 
Sbjct: 442 AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIL 501

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  K+   D AL ++  +++   +P  +TYN +I GLC++ ++  A   L E+ ++G  P
Sbjct: 502 GYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP 561

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY  I+         +   +  + M    +  D +    ++    + G L++A    
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLF 621

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             +V+ G  +D+V+YNT+I+  CKEGK E AY LL EME +    D+YT+ ++I  L  A
Sbjct: 622 NTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDA 681

Query: 336 GNIKGARLHLEYMNKIGF--DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
           G IK A      M + G   D NL        +LGK G+      V E  + K S  YS 
Sbjct: 682 GRIKEAEEFTLKMVESGIVHDQNL--------KLGK-GQNVLTSEVSEHFDFK-SIAYSD 731

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ++ LC   +   A  L +   K GV + K     +++GL
Sbjct: 732 QINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 169/382 (44%), Gaps = 58/382 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   + +A   +      G+ PD VTYN LI AYC+       + +++ M  
Sbjct: 392 NIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTS 451

Query: 71  AGISPDVVT-----------------YNSLIAGATRNSLLSC------------------ 95
            G+  D  T                 YN L + + R  +L                    
Sbjct: 452 KGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDR 511

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L+L DEM E  I P   +YNS++  L Q  K D+A     +M+   L P   T+NI+++
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIH 571

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C     + A +    + ++ F P++ T NIL++GLC+ G L  A  +   L   G   
Sbjct: 572 GFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDI 631

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY TI+    +  K++   ++L+ M+ K    D + Y  +IAA    GR+KEA ++ 
Sbjct: 632 DVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFT 691

Query: 276 EQMVTDGVQLD-----------------------IVSYNTLINLYCKEGKLEAAYLLLDE 312
            +MV  G+  D                        ++Y+  IN  C + K + A  L  E
Sbjct: 692 LKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVE 751

Query: 313 MEKQGFECDKYTHTILIDGLCK 334
           + K+G   +KYT+  L++GL K
Sbjct: 752 VTKEGVALNKYTYLNLMEGLIK 773


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 206/430 (47%), Gaps = 15/430 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV Y+ +ID+ C+         +   M+E GI PD+ TYNS+I G   +   S + 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL EMLE  I PDV +YN+L++   + GK  EA  ++ +M+   + P T T++ M++G 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A  MF  +   G  P L+T+N LI G C A R+     +L E+ ++G   + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++   +        L++L  M   G   D     T++      G+LK+A +  + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 278 MVT-----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           M             +GV+ D+ +YN LI+    EGK   A  L +EM  +G   D  T++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGLCK   +  A    + M    F  N+  +  +++   K G++D  + +F  M   
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             V ++ TY +++    K   +  A  +    + SGV       + ++ GL      + A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 443 KKIQSKIRMA 452
             +  K++M+
Sbjct: 671 VAMLEKLQMS 680



 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P  +TY  ++D  C+     +   +L +M E   I P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I    ++   S + +L  EM E GI PD+++YNS++      G+  +A ++ 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TY+ +I G CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +PN IT+ T++      ++   G+E+L  M   G   D   Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D +++M++ G+  DIV+ +TL++  C  GKL+ A  +   M+K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F+SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 614 ANAITYITLICGFRKVG 630



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 17/412 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R   A+ +  +    G+ PD+ TYN +I  +C    +     +L  M E  ISP
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI    +      + +L DEML  GI P+  +Y+S++    +  + D A  +F
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M     +P   TFN +++G C  +  D+ + +   + + G V +  TYN LI G    
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------GYT 249
           G L  A  +L+E+  SG  P+ +T  T++     N K K  LE+   M++        + 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 250 FDGF-----GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           F+G       Y  +I+  +  G+  EA +  E+M   G+  D ++Y+++I+  CK+ +L+
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCI 363
            A  + D M  + F  +  T T LI+G CKAG +  G  L  E M + G  +N   Y  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE-MGRRGIVANAITYITL 622

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G I+ A+++F+ M       D+ T  +M+  L   + L  A  +L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 205/455 (45%), Gaps = 51/455 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC  ++L  A +      +LG+ PDVVT+N L+   C          + ++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT+ +L+ G  R   +  ++ LLD M+E G+ P   +Y +++  + + G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++ LCK+    +A  +F  +Q+ G  P+L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A  +L+E+ +   +P+ +TY  ++    +  K+    E+   M  +G 
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A      M T G   +++++NTLI+ YC   +++    
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 309 LLDEMEKQGFECDKYTHTILI-----------------------------------DGLC 333
           LL EM + G   D  T+  LI                                   DGLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 334 KAGNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             G +K A    + M K            G + +++ YN ++  L  +GK   A  ++E 
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           M     V D+ TYSSM+  LCK  RL  A+++  S
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 5/442 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP VV +  L+    +    D   ++  +M    I  D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++  LI      S L  +L    ++ ++G+ PDV ++N+L+H L    +  EA  +F 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+    ++ ++     + + M+ KG   D F Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F   GR  +A   +++M+   +  D+V+YN LIN + KEGK   A  L DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T++ +IDG CK   +  A      M   G   NL  +N ++D      +ID 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            + +   M     V D+ TY++++H       L +A  LL   + SG+         ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GLRHSGCRREAKKIQSKIRMAK 453
           GL  +G  ++A ++   ++ +K
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSK 495



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 13/310 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  P+++T+N LID YC     D G  +L+ M E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      L+ +LDLL EM+  G+ PD+ + ++L+  L   GK  +A  +F+
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI+++GL        A  ++  +   G VP+ +TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+TT++    +  +   GLE+   M R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
           +G   +   Y T+I  F K+G +  A D  ++M++ GV  D ++  N L  L+ KE +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELK 668

Query: 305 AAYLLLDEME 314
            A  +L++++
Sbjct: 669 RAVAMLEKLQ 678



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 11/350 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  +  +AE +  + +  G++P+ +TY+ +ID +C+    DA   +   M  
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP+++T+N+LI G      +   ++LL EM E G+  D  +YN+L+H  + +G  + 
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFV 179
           A  + Q+MI   L P   T + +L+GLC N    +AL MF+ +QK           +G  
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNILI GL   G+   A  + +E+   G  P+ ITY++++    +  +     ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +M  K ++ +   + T+I  + K GR+ +  +   +M   G+  + ++Y TLI  + K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            G +  A  +  EM   G   D  T   ++ GL     +K A   LE + 
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +  F     L  A  ++ + I  G+ PD+VT + L+D  C          +  
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 67  RMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
            M+++           G+ PDV TYN LI+G         + +L +EM   GI PD  +Y
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           +S++  L +  + DEA ++F  M     +P   TF  ++NG CK    D+ L +F  + +
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G V   +TY  LI G  K G +  A  I +E+  SG  P+ IT   ++   +   + K 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 236 GLEILSAMK 244
            + +L  ++
Sbjct: 670 AVAMLEKLQ 678



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    M+       +V +  L+ +  +  + +    L  +ME++   
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           CD Y+ TILI   C    +  A      + K+G   ++  +N ++  L  + ++  A+N+
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 380 FESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F  M E     +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 436 SGCRREAKKIQSKIRMAKISH 456
            G    A  +  K  M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 206/420 (49%), Gaps = 12/420 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            NI V    K+ R+E+A  I          LP+VVTY  +I+  C+    D    +L+ M
Sbjct: 103 FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G  P+V+TY+ L+ G  +         LL EM   G  PDV  YN+L++ L +  + 
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  + Q MI     P   T+N ++   C+++  D A R+ + + + G  P+++ YN +
Sbjct: 223 DEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTV 282

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR------NRKYKLGLEILSA 242
           I GLC+  RL  A+ +LK++  +   P+ ITY+TI+    +      + K +   EIL  
Sbjct: 283 IAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEM 342

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK+ G   +   Y  VI    +  + ++A   + +M+   V  D+ S++ +I   CK   
Sbjct: 343 MKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHD 402

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+AAY +   M ++  + +   +  LIDGL K G +  A    E M +  F   +  YN 
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNS 461

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++D L   G+I+ A+ + E M  K+ F    +Y +++  LC+   +  A +L  +    G
Sbjct: 462 VLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 11/410 (2%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +P+  TY  LI   C+    D  Y +L+ MR+ GI P V  +N +I G  +      +L 
Sbjct: 27  VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-ICGDLTPCTATFNIMLNGL 157
               +      PD+ ++N L+  L + G+ +EA ++F+ M       P   T+  ++NGL
Sbjct: 87  YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+   D A+ +   + + G  P ++TY++L++GLCKAGR      +L+E+   G  P+ 
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           I Y T++    ++R+    LE++  M R G       Y +++  F +  ++  A   ++ 
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G   D+++YNT+I   C++ +L+ A  LL +M       D  T++ +IDGLCK   
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326

Query: 338 I------KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 387
           +      + A   LE M + G   N   Y  +++ L +  K   A+ +   M     V D
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             ++S ++ +LCK+  L +A K+     +   +    A  A++DGL   G
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 219/451 (48%), Gaps = 24/451 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA +L++A  ++ +    G+ P V  +N +I   C+   F         +     +PD
Sbjct: 40  LCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPD 99

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEM-LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++T+N L+    ++  +  +  + + M       P+V +Y ++++ L + GK D A  + 
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M      P   T+++++ GLCK   TD    + + + + GF P+++ YN L+ GLCK+
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +++ +  SG  P  +TY ++M+   R+++      ++  M  +G   D   Y
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------EGKLEAAYLL 309
            TVIA   +  RL +A   ++QMV      D+++Y+T+I+  CK      + KLEAA  +
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M++ G   +  T+ ++I+GLC+A   + A   L  M       +L +++ ++  L K
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 370 DGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASK---LLLSCLKSGVRIL 422
              +D A  +F  M  ++       Y++++  L K   +  A +   L++   + GV   
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATY 459

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            S    V+DGL   G      +I+  +RM +
Sbjct: 460 NS----VLDGLCGVG------RIEEAVRMVE 480



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 187/362 (51%), Gaps = 11/362 (3%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           RE    P+  TY SLI G  +   L  + +LLDEM + GIPP V  +N ++  L + G+ 
Sbjct: 22  REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRF 81

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 187
            +A   F+ +     TP   TFNI+++ L K+   + A ++F  +      +P +VTY  
Sbjct: 82  GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G+L  A  +L  + ++G  PN ITY+ +++   +  +   G  +L  M R+G
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D   Y T++    K  RL EA + ++ M+  G    +V+YN+L+ L+C+  +++ A+
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+  M ++G   D   +  +I GLC+   +  A+  L+ M       ++  Y+ I+D L
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321

Query: 368 GKDGKID------HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            KD ++D       A  + E M+      ++ TY+ ++  LC+A++   A  LL   + S
Sbjct: 322 CKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381

Query: 418 GV 419
            V
Sbjct: 382 EV 383



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 162/331 (48%), Gaps = 7/331 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ RL++A  ++   IR G  P VVTYN L++ +C+    D  + ++  M E G  PD
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD------E 130
           V+ YN++IAG  R++ L  +  LL +M+     PDV +Y++++  L +  + D       
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M      P   T+ +++ GLC+ R +  AL + R +     VP+L +++++I 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+  L  A  I   + +    PN + Y  ++    +  +    + +   M  + +  
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRP 454

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +V+     +GR++EA   +E M+      D  SY  LI   C+   +E AY L 
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
             +E +GF  +   + +L++ LCK   +  A
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 109/197 (55%), Gaps = 1/197 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A + ++A A++   I   V+PD+ +++M+I + C+    DA Y I   M E    P+
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y +LI G ++   +  ++ + + M+E    P V +YNS++  L  +G+ +EA R+ +
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVE 480

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI  +  P  A++  ++ GLC+    + A  +F+ ++  GF  E+  YN+L+  LCK  
Sbjct: 481 GMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKK 540

Query: 197 RLRTARWILKELGDSGH 213
           RL  A  +  +L ++G+
Sbjct: 541 RLSDAHGVANKLIEAGY 557



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 42/283 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY------TI 64
           N  +   C+  RL+ A+A++   +    +PDV+TY+ +ID  C+    DA +       I
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS---------- 114
           L  M++ G  P+  TY  +I G  R      +L LL  M++  + PD+ S          
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 115 -------------------------YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                                    Y +L+  L + G+ D+A RVF+ M+     P  AT
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVAT 458

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N +L+GLC     + A+RM  G+      P+  +Y  LI+GLC+   +  A  + + + 
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
             G A     Y  ++    + ++      + + +   GY   G
Sbjct: 519 AKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQG 561


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 227/446 (50%), Gaps = 6/446 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  +L  A  I  D  R G+ P+V+T N++ID  C+    +   +I   M +
Sbjct: 163 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 222

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +P+ VT++SLI G  +   +  +  L ++ML+ G  P    Y SL+   F+ G+ ++
Sbjct: 223 KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKED 282

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            ++++++M+    +P     N  ++ + K   T+    +FR +  HGF+P+  +Y+ILI 
Sbjct: 283 GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIH 342

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG       +   + + G   +   Y  ++    ++ K     ++L  MK KG+  
Sbjct: 343 GLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 402

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +VI    KI RL EA    E+  ++G++L++V Y++LI+ + K G+++ AYL++
Sbjct: 403 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIM 462

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ ++G   + YT   L+D L KA  I  A +  + M  +    N   Y+ +++ L + 
Sbjct: 463 EELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRV 522

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            K + A   ++ M+      ++ TY++M+  L KA  +  AS  L S  K+   I  SA 
Sbjct: 523 RKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG-LFSRFKANGGIPDSAS 581

Query: 427 -KAVVDGLRHSGCRREAKKIQSKIRM 451
             A+++GL  +    +A  +  + R+
Sbjct: 582 YNAMIEGLSSANKAMDAYALFEETRL 607



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 225/524 (42%), Gaps = 77/524 (14%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           + GK+   LL   V   CKANRL++A  +     +   +P    YN +I  Y     FD 
Sbjct: 51  LIGKVGLMLLFPWV--LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDE 108

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y +L R +  G  P V+ YN ++    +   +  +L + +EM    + P+V +YN L+ 
Sbjct: 109 AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILID 167

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L + GK + A  +  DM    L P   T NIM++ LCK +  + A  +F G+      P
Sbjct: 168 MLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 227

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT------------------- 221
             VT++ LI GL K GR+  A  + +++ D GH P AI YT                   
Sbjct: 228 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 287

Query: 222 ----------------TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
                           T M C F+  + + G  +   +   G+  D   Y  +I   VK 
Sbjct: 288 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKA 347

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-------- 317
           G   E  +    M   G  LD  +YN +I+ +CK GK+  AY LL+EM+ +G        
Sbjct: 348 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 407

Query: 318 -------------------FECDK--------YTHTILIDGLCKAGNIKGARLHLEYMNK 350
                              FE  K          ++ LIDG  K G I  A L +E + +
Sbjct: 408 GSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ 467

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 406
            G   N+  +NC++D L K  +I+ A+  F+SM+      +  TYS +++ LC+ ++   
Sbjct: 468 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 527

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           A        K G++        ++ GL  +G   EA  + S+ +
Sbjct: 528 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 571



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 1/321 (0%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           C F KA   EK  A+  +    G +PD  +Y++LI    +    +  Y +   M+E G  
Sbjct: 308 CVF-KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 366

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
            D   YN++I G  ++  ++ +  LL+EM   G PP V +Y S++  L ++ + DEA  +
Sbjct: 367 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 426

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F++     +      ++ +++G  K    D A  +   L + G  P + T+N L+  L K
Sbjct: 427 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 486

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           A  +  A    + + D    PN ITY+ ++    R RK+         M++ G   +   
Sbjct: 487 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 546

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I+   K G + EA+    +   +G   D  SYN +I       K   AY L +E  
Sbjct: 547 YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 606

Query: 315 KQGFECDKYTHTILIDGLCKA 335
            +G      T  +L+D L KA
Sbjct: 607 LKGCNIHTKTCVVLLDALHKA 627



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 115/221 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T   N  +  FCK+ ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 367 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 426

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +VV Y+SLI G  +   +  +  +++E+++ G+ P+V+++N L+  L +
Sbjct: 427 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 486

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M      P   T++I++NGLC+ R  + A   ++ +QK G  P  +T
Sbjct: 487 AEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 546

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL KAG +  A  +      +G  P++ +Y  +++
Sbjct: 547 YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 587



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 3/214 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+  + +  +  F K  R+++A  I+ + ++ G+ P+V T+N L+DA  +    +    
Sbjct: 436 KLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALI 495

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M++    P+ +TY+ LI G  R    + +     EM ++G+ P+  +Y +++  L 
Sbjct: 496 CFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLA 555

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   EA+ +F         P +A++N M+ GL       +A  +F   +  G      
Sbjct: 556 KAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 615

Query: 184 TYNILIKGLCKAGRLRTAR---WILKELGDSGHA 214
           T  +L+  L KA  L  A     +LKE   S HA
Sbjct: 616 TCVVLLDALHKAECLEQAAIVGAVLKETAKSQHA 649



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 18/177 (10%)

Query: 249 TFDGFGYCT-----VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-------- 295
           +  GFG  +     ++A  VK  +L+EA D ++ M     +    +Y  LI         
Sbjct: 2   SLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLF 61

Query: 296 --LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
             + CK  +L+ A  L +++E+       Y +  +I G   AG    A   LE     G 
Sbjct: 62  PWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 121

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSA 407
             ++ AYNCI+  LGK  +++ A+ +FE M+   V +  TY+ ++  LC+  +L +A
Sbjct: 122 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAA 178


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 206/430 (47%), Gaps = 15/430 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV Y+ +ID+ C+         +   M+E GI PD+ TYNS+I G   +   S + 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL EMLE  I PDV +YN+L++   + GK  EA  ++ +M+   + P T T++ M++G 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A  MF  +   G  P L+T+N LI G C A R+     +L E+ ++G   + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++   +        L++L  M   G   D     T++      G+LK+A +  + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 278 MVT-----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           M             +GV+ D+ +YN LI+    EGK   A  L +EM  +G   D  T++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGLCK   +  A    + M    F  N+  +  +++   K G++D  + +F  M   
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             V ++ TY +++    K   +  A  +    + SGV       + ++ GL      + A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 443 KKIQSKIRMA 452
             +  K++M+
Sbjct: 671 VAMLEKLQMS 680



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P  +TY  ++D  C+     +   +L +M E   I P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I    ++   S + +L  EM E GI PD+++YNS++      G+  +A ++ 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TY+ +I G CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +PN IT+ T++      ++   G+E+L  M   G   D   Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D +++M++ G+  DIV+ +TL++  C  GKL+ A  +   M+K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F+SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 614 ANAITYITLICGFRKVG 630



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 17/412 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R   A+ +  +    G+ PD+ TYN +I  +C    +     +L  M E  ISP
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI    +      + +L DEML  GI P+  +Y+S++    +  + D A  +F
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M     +P   TFN +++G C  +  D+ + +   + + G V +  TYN LI G    
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------GYT 249
           G L  A  +L+E+  SG  P+ +T  T++     N K K  LE+   M++        + 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 250 FDGF-----GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           F+G       Y  +I+  +  G+  EA +  E+M   G+  D ++Y+++I+  CK+ +L+
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCI 363
            A  + D M  + F  +  T T LI+G CKAG +  G  L  E M + G  +N   Y  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE-MGRRGIVANAITYITL 622

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G I+ A+++F+ M       D+ T  +M+  L   + L  A  +L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 205/455 (45%), Gaps = 51/455 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC  ++L  A +      +LG+ PDVVT+N L+   C          + ++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT+ +L+ G  R   +  ++ LLD M+E G+ P   +Y +++  + + G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++ LCK+    +A  +F  +Q+ G  P+L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A  +L+E+ +   +P+ +TY  ++    +  K+    E+   M  +G 
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A      M T G   +++++NTLI+ YC   +++    
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 309 LLDEMEKQGFECDKYTHTILI-----------------------------------DGLC 333
           LL EM + G   D  T+  LI                                   DGLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 334 KAGNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             G +K A    + M K            G + +++ YN ++  L  +GK   A  ++E 
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           M     V D+ TYSSM+  LCK  RL  A+++  S
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 5/442 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP VV +  L+    +    D   ++  +M    I  D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++  LI      S L  +L    ++ ++G+ PDV ++N+L+H L    +  EA  +F 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+    ++ ++     + + M+ KG   D F Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F   GR  +A   +++M+   +  D+V+YN LIN + KEGK   A  L DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T++ +IDG CK   +  A      M   G   NL  +N ++D      +ID 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            + +   M     V D+ TY++++H       L +A  LL   + SG+         ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GLRHSGCRREAKKIQSKIRMAK 453
           GL  +G  ++A ++   ++ +K
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSK 495



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 13/310 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  P+++T+N LID YC     D G  +L+ M E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      L+ +LDLL EM+  G+ PD+ + ++L+  L   GK  +A  +F+
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI+++GL        A  ++  +   G VP+ +TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+TT++    +  +   GLE+   M R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
           +G   +   Y T+I  F K+G +  A D  ++M++ GV  D ++  N L  L+ KE +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELK 668

Query: 305 AAYLLLDEME 314
            A  +L++++
Sbjct: 669 RAVAMLEKLQ 678



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 11/350 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  +  +AE +  + +  G++P+ +TY+ +ID +C+    DA   +   M  
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP+++T+N+LI G      +   ++LL EM E G+  D  +YN+L+H  + +G  + 
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFV 179
           A  + Q+MI   L P   T + +L+GLC N    +AL MF+ +QK           +G  
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNILI GL   G+   A  + +E+   G  P+ ITY++++    +  +     ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +M  K ++ +   + T+I  + K GR+ +  +   +M   G+  + ++Y TLI  + K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            G +  A  +  EM   G   D  T   ++ GL     +K A   LE + 
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +  F     L  A  ++ + I  G+ PD+VT + L+D  C          +  
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 67  RMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
            M+++           G+ PDV TYN LI+G         + +L +EM   GI PD  +Y
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           +S++  L +  + DEA ++F  M     +P   TF  ++NG CK    D+ L +F  + +
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G V   +TY  LI G  K G +  A  I +E+  SG  P+ IT   ++   +   + K 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 236 GLEILSAMK 244
            + +L  ++
Sbjct: 670 AVAMLEKLQ 678



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    M+       +V +  L+ +  +  + +    L  +ME++   
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           CD Y+ TILI   C    +  A      + K+G   ++  +N ++  L  + ++  A+N+
Sbjct: 112 CDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL 171

Query: 380 FESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F  M E     +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 436 SGCRREAKKIQSKIRMAKISH 456
            G    A  +  K  M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 206/430 (47%), Gaps = 15/430 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV Y+ +ID+ C+         +   M+E GI PD+ TYNS+I G   +   S + 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL EMLE  I PDV +YN+L++   + GK  EA  ++ +M+   + P T T++ M++G 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A  MF  +   G  P L+T+N LI G C A R+     +L E+ ++G   + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++   +        L++L  M   G   D     T++      G+LK+A +  + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 278 MVT-----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           M             +GV+ D+ +YN LI+    EGK   A  L +EM  +G   D  T++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGLCK   +  A    + M    F  N+  +  +++   K G++D  + +F  M   
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             V ++ TY +++    K   +  A  +    + SGV       + ++ GL      + A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 443 KKIQSKIRMA 452
             +  K++M+
Sbjct: 671 VAMLEKLQMS 680



 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 16/437 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P  +TY  ++D  C+     +   +L +M E   I P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+++I    ++   S + +L  EM E GI PD+++YNS++      G+  +A ++ 
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   T+N ++N   K      A  ++  +   G +P  +TY+ +I G CK 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +   +   G +PN IT+ T++      ++   G+E+L  M   G   D   Y
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F  +G L  A D +++M++ G+  DIV+ +TL++  C  GKL+ A  +   M+K
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K  ++D A  +F+SM  K    +  T++++++  CKA R+    +L     + G+ 
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 421 ILKSAQKAVVDGLRHSG 437
                   ++ G R  G
Sbjct: 614 ANAITYITLICGFRKVG 630



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 17/412 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R   A+ +  +    G+ PD+ TYN +I  +C    +     +L  M E  ISP
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI    +      + +L DEML  GI P+  +Y+S++    +  + D A  +F
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M     +P   TFN +++G C  +  D+ + +   + + G V +  TYN LI G    
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------GYT 249
           G L  A  +L+E+  SG  P+ +T  T++     N K K  LE+   M++        + 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 250 FDGF-----GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           F+G       Y  +I+  +  G+  EA +  E+M   G+  D ++Y+++I+  CK+ +L+
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCI 363
            A  + D M  + F  +  T T LI+G CKAG +  G  L  E M + G  +N   Y  +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE-MGRRGIVANAITYITL 622

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G I+ A+++F+ M       D+ T  +M+  L   + L  A  +L
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 205/455 (45%), Gaps = 51/455 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC  ++L  A +      +LG+ PDVVT+  L+   C          + ++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E    P+VVT+ +L+ G  R   +  ++ LLD M+E G+ P   +Y +++  + + G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 130 EANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            A  + + M     + P    ++ +++ LCK+    +A  +F  +Q+ G  P+L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C +GR   A  +L+E+ +   +P+ +TY  ++    +  K+    E+   M  +G 
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y ++I  F K  RL  A      M T G   +++++NTLI+ YC   +++    
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 309 LLDEMEKQGFECDKYTHTILI-----------------------------------DGLC 333
           LL EM + G   D  T+  LI                                   DGLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 334 KAGNIKGARLHLEYMNKI-----------GFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             G +K A    + M K            G + +++ YN ++  L  +GK   A  ++E 
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           M     V D+ TYSSM+  LCK  RL  A+++  S
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 5/442 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP VV +  L+    +    D   ++  +M    I  D
Sbjct: 54  FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++N LI      S L  +L    ++ ++G+ PDV ++ +L+H L    +  EA  +F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + Y+ I+    ++ ++     + + M+ KG   D F Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F   GR  +A   +++M+   +  D+V+YN LIN + KEGK   A  L DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T++ +IDG CK   +  A      M   G   NL  +N ++D      +ID 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            + +   M     V D+ TY++++H       L +A  LL   + SG+         ++D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GLRHSGCRREAKKIQSKIRMAK 453
           GL  +G  ++A ++   ++ +K
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSK 495



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 13/310 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  P+++T+N LID YC     D G  +L+ M E G+  D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      L+ +LDLL EM+  G+ PD+ + ++L+  L   GK  +A  +F+
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI+++GL        A  ++  +   G VP+ +TY
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +PN +T+TT++    +  +   GLE+   M R
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
           +G   +   Y T+I  F K+G +  A D  ++M++ GV  D ++  N L  L+ KE +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELK 668

Query: 305 AAYLLLDEME 314
            A  +L++++
Sbjct: 669 RAVAMLEKLQ 678



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 174/350 (49%), Gaps = 11/350 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  +  +AE +  + +  G++P+ +TY+ +ID +C+    DA   +   M  
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP+++T+N+LI G      +   ++LL EM E G+  D  +YN+L+H  + +G  + 
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFV 179
           A  + Q+MI   L P   T + +L+GLC N    +AL MF+ +QK           +G  
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNILI GL   G+   A  + +E+   G  P+ ITY++++    +  +     ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +M  K ++ +   + T+I  + K GR+ +  +   +M   G+  + ++Y TLI  + K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            G +  A  +  EM   G   D  T   ++ GL     +K A   LE + 
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +  F     L  A  ++ + I  G+ PD+VT + L+D  C          +  
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489

Query: 67  RMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
            M+++           G+ PDV TYN LI+G         + +L +EM   GI PD  +Y
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           +S++  L +  + DEA ++F  M     +P   TF  ++NG CK    D+ L +F  + +
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G V   +TY  LI G  K G +  A  I +E+  SG  P+ IT   ++   +   + K 
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 236 GLEILSAMK 244
            + +L  ++
Sbjct: 670 AVAMLEKLQ 678



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 6/201 (2%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L++A D    M+       +V +  L+ +  +  + +    L  +ME++   
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           CD Y+  ILI   C    +  A      + K+G   ++  +  ++  L  + ++  A+N+
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171

Query: 380 FESM-EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F  M E     +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG+  
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 436 SGCRREAKKIQSKIRMAKISH 456
            G    A  +  K  M ++SH
Sbjct: 232 KGDTVSALNLLRK--MEEVSH 250


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 217/452 (48%), Gaps = 16/452 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C  NR+ +  A++   +R G +PD+VTY  LI   C          +  RM+
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE------MGIPPDVWSYNSLMHCLF 123
           + G +P+ +TY +L+ G  R   +S +L L  EML       +   P V SY+ ++  L 
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + DEA  +F++M    +TP   ++  +++G C     + A R+F  +   G  P +V
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVV 313

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+LI  LCK G++  A+ +L+ +   G  PN +TY ++++            E+  +M
Sbjct: 314 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D   Y  +I  + K  +++EA      M+  G + D+ +Y  L+    + GK+
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L   M+  G   D Y + I ++GLCK G +  A      +       ++E +NC+
Sbjct: 434 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K GK++ A  +FE +  +    D  TY+ M+H  C+  ++  A+ L     K+G 
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
              K     ++ G        E+KK++  + +
Sbjct: 554 TPDKITYATLIRGF------FESKKLEKVVEL 579



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 166/346 (47%), Gaps = 10/346 (2%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P + S+  L+  L ++    +   ++  M    ++P   T NI+LN LC        L +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
             G+ + G++P++VTY  LIKGLC   R+  A  +   +   G  PNAITY T+MK   R
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 230 NRKYKLGL----EILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                + L    E+L+     G  F      Y  +I A  K  R  EA D  E+M   G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              ++SY +LI+ +C  GK E A  L +EM  QG + +  T  +LID LCK G +  A+ 
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            LE M + G   NL  YN +++     G ++ A  +F SM  K    D   Y+ +++  C
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K  ++  A KL    L+ G R       A++ GL   G   +AKK+
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 194/409 (47%), Gaps = 10/409 (2%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           ++    +   + M  +  +P + ++  L++G  +    S    L ++M   GI PD  + 
Sbjct: 75  ITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTL 134

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N L++CL  + +  E   V   ++     P   T+  ++ GLC       A  +F  +QK
Sbjct: 135 NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSG-----HAPNAITYTTIMKCCFR 229
            G  P  +TY  L+KGLC+ G +  A  + +E L DS        P  I+Y+ I+    +
Sbjct: 195 LGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCK 254

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
           +R+     ++   MK +G T     Y ++I  F   G+ +EA     +MV  GVQ ++V+
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           +N LI++ CKEGK+  A  LL+ M ++G   +  T+  LI+G C  G++  AR     M 
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 405
             G + ++  Y  +++   K  K++ A+ ++  M    +  D  TY +++  L +  ++ 
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 434

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            A KL       G+          ++GL  +GC  EA ++ +K++   I
Sbjct: 435 DAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 174/353 (49%), Gaps = 2/353 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  R ++A  +  +    G+ P V++Y  LI  +C    ++    + N M  
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVT+N LI    +   +  + DLL+ M++ GI P++ +YNSL+     +G  + 
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M      P    + +++NG CK    + A++++ G+ + G  P++ TY  L+ 
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 425

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G++  A+ +   +   G   +   Y   +    +N      +E+ + +K      
Sbjct: 426 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 485

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   +  +I    K G+L+ A +  E++  + +Q D+V+YN +I+ +C+ G++  A +L 
Sbjct: 486 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 545

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA--RLHLEYMNKIGFDSNLEAYN 361
            +MEK G   DK T+  LI G  ++  ++     LH+     +  D N+  +N
Sbjct: 546 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILRHN 598



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     N  +   CKA +LE A  +     +  + PDVVTYN++I  +C+         
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           +  +M + G +PD +TY +LI G   +  L   ++LL  M++  +  DV
Sbjct: 544 LFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 197/408 (48%), Gaps = 5/408 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F ++N +EKA  +    +  G  PD V+Y++LI    +    D    IL+ M   G +P 
Sbjct: 55  FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPS 114

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y+SL+    +   +  +  L DEM+  G  PD   +  L+  L Q GK  +A+  F+
Sbjct: 115 MQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P    +N++L+GLC +   + A  +F  ++ H   P++VTYN L+  +CKA 
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKAR 234

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + + +  +G+ PN IT++T++    R  + +  LE+  +M   G   + + Y 
Sbjct: 235 RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-K 315
           T+I+   +  ++ +A +  E+M    +  D V+YN+LI  YCK G ++ A  L  EM   
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G +    T   LIDG CK G +  A   +  M   G  ++   Y  ++  L +  K+D 
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           A+ V++ M  K    D  +  S V  LCK   +  A  +  +  KSG 
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 462



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 196/397 (49%), Gaps = 5/397 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +  K  + E++  ++ + +  G  PDV  +N ++  + +  + +    +   M E+G  P
Sbjct: 19  SLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP 78

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D V+Y+ LI G  +   L  SL +L EM+  G  P + +Y+SL+  L +  + D A+ +F
Sbjct: 79  DNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLF 138

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI G   P    F  ++ GLC+     +A   F+ + KHG  P +  YN+L+ GLC +
Sbjct: 139 DEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSS 198

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A  +  E+     +P+ +TY T++    + R+ + G ++  AM+  GY  +   +
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    + G L++A +    M+  G + +  +Y TLI+  C+  K+  A  L ++M +
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
                D   +  LI G CK G++  A +L+ E     G    +  +N ++D   K GK+ 
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 378

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
            A  +   M  K    DS TY  ++  L +A +L  A
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 208/422 (49%), Gaps = 5/422 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           +  +V TY+ +I +  +    +  Y +L  M  AG +PDV  +N ++ G  R++ +  + 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++   M+E G  PD  SY+ L+H L ++GK DE+ ++  +M+    TP    ++ ++  L
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            K R  D+A  +F  + + G  P+ + +  LI GLC+AG+++ A    K++   G  PN 
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
             Y  ++     + + +    + + MK    + D   Y T++ A  K  R++E     E 
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G   ++++++TLI+  C+ G+LE A  +   M + G + +KYT+T LI GLC+A  
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYS 392
           +  AR   E M +     +  AYN ++    K G +D A  ++  M           T++
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +++   CK  +L  A++L+      G+       + ++ GL  +    EA ++  ++R  
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 453 KI 454
           K 
Sbjct: 426 KF 427



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 181/347 (52%), Gaps = 4/347 (1%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M +  I  +V++Y+S++  L +  KP+E+ +V ++M+     P    FN ++ G  ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A  +++ + + G+ P+ V+Y+ILI GL K G+L  +  IL E+   G  P+   Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           +++   + R+      +   M R G+  D   +  +I    + G++K+A++  +QM   G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            Q ++  YN L++  C  G+LE A  L  EM+      D  T+  L+D +CKA  ++   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNL 398
              E M   G+  N+  ++ ++  L + G+++ A+ VF SM E     + +TY++++  L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           C+A+++  A +L     ++ +     A  +++ G    G   EA+K+
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 59/135 (43%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FCK  +L +A  ++ +    G+  D  TY +LI    +    D    +  +MR
Sbjct: 364 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMR 423

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E     D V+  S + G  +   +  +  + +   + G  P+  ++  L   L +LG+ +
Sbjct: 424 EKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 483

Query: 130 EANRVFQDMICGDLT 144
           +A ++ +     D+T
Sbjct: 484 DAQKLMEPAKARDIT 498


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 207/417 (49%), Gaps = 11/417 (2%)

Query: 26  AEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           ++A IID ++L       G  P ++TY  +I   C+         +L +M E G  PDVV
Sbjct: 153 SKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVV 212

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN++I    ++   + ++    EM++ GIPP+V +Y+S++H    LG+ +EA  +F+ M
Sbjct: 213 AYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQM 272

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I  ++ P T TF I+++GLCK      A R+F  + ++G  P+  TY+ L+ G C   ++
Sbjct: 273 IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQM 332

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A+ +   +   G AP+   Y  ++    ++R+      +LS M  +  T D   Y T+
Sbjct: 333 DEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL 392

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +  F + GR + A    ++M + G+  D ++Y+ L++  CK G L+ A+ LL  M++   
Sbjct: 393 MQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E     + ILI G+C  G ++ AR     +   G   ++  Y  ++  L K+G  + A  
Sbjct: 453 EPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACE 512

Query: 379 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           +F  M V     +S TY+  +    +     +A +L+   +  G     S  + ++D
Sbjct: 513 MFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 186/387 (48%), Gaps = 8/387 (2%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P VV +N L+    +    S  + L  +M    I P+V++   L++CL    + D  +  
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNR-DHVHFA 125

Query: 135 FQ---DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           F     M    L P   TF  +LNGLC      +A+++F  + K GF P L+TY  +IKG
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LCK G    A  +LK++ + G  P+ + Y T++    ++R+    +   S M  +G   +
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y +++  F  +G+L EAT   +QM+   V  + V++  L++  CKEG +  A  + +
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M + G E D YT++ L+DG C    +  A+   + M   GF  ++  YN +++   K  
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           +++ A  +   M       D+ TYS+++   C+A R   A KL       G+        
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 428 AVVDGLRHSGCRREAKKIQSKIRMAKI 454
            ++DGL   G   EA ++   ++ +KI
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKI 452



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 197/397 (49%), Gaps = 6/397 (1%)

Query: 10  LNICVCTFCKANR--LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L I +   C +NR  +  A + +    +LG+ P  VT+  L++  C          + + 
Sbjct: 107 LTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDE 166

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           + + G +P ++TY ++I G  +    + +L LL +M E G  PDV +YN+++  L +  +
Sbjct: 167 IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRR 226

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA   F +M+   + P   T++ +L+G C     + A  +F+ +     +P  VT+ I
Sbjct: 227 ANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GLCK G +  AR + + + ++G  P+A TY+ +M       +     ++   M  KG
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +      Y  +I    K  RL EA   + +M    +  D V+Y+TL+  +C+ G+ + A 
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D  T++IL+DGLCK G++  A   L+ M +   + ++  YN ++  +
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM 466

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
              GK++ A  +F ++ VK       TY+ M+  L K
Sbjct: 467 CNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLK 503



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 172/367 (46%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK      A  ++      G  PDVV YN +ID+ C+    +      + M + GI P+
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+S++ G      L+ +  L  +M+   + P+  ++  L+  L + G   EA RVF+
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T++ +++G C     D A ++F  +   GF P +  YNILI G CK+ 
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A+ +L E+ D    P+ +TY+T+M+   +  + ++  ++   M   G   D   Y 
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G L EA   ++ M    ++  I  YN LI   C  GKLEAA  L   +  +
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVK 485

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +    T+T++I GL K G    A      M   G   N   YN  +    ++G   +A
Sbjct: 486 GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNA 545

Query: 377 INVFESM 383
           + + E M
Sbjct: 546 VRLIEEM 552



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 151/325 (46%), Gaps = 35/325 (10%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    I V   CK   + +A  +       GV PD  TY+ L+D YC     D    + 
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   G +P V  YN LI G  ++  L+ +  LL EM +  + PD  +Y++LM    Q 
Sbjct: 340 DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQA 399

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+P  A ++F++M    L P + T++I+L+GLCK+ + D A R+ + +Q+    P +  Y
Sbjct: 400 GRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIY 459

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NILI+G+C  G+L  AR +   L   G  P+ +TYT +                      
Sbjct: 460 NILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVM---------------------- 497

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                        I+  +K G   EA +   +MV +G   +  +YN  I  + + G    
Sbjct: 498 -------------ISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSN 544

Query: 306 AYLLLDEMEKQGFECDKYTHTILID 330
           A  L++EM  +GF  D  T  +L+D
Sbjct: 545 AVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 170/360 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  R  +A     + +  G+ P+VVTY+ ++  +C     +   ++  +M  
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+ VT+  L+ G  +  ++  +  + + M E G+ PD ++Y++LM       + DE
Sbjct: 275 RNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDE 334

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F  M+     P    +NI++NG CK+R  + A  +   +      P+ VTY+ L++
Sbjct: 335 AQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQ 394

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+AGR + A+ + KE+   G  P++ITY+ ++    ++        +L AM+      
Sbjct: 395 GFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I      G+L+ A +    +   G+Q  +V+Y  +I+   KEG    A  + 
Sbjct: 455 HICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMF 514

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G   +  T+ + I G  + G+   A   +E M   GF ++   +  ++D    D
Sbjct: 515 RKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESND 574


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 219/478 (45%), Gaps = 39/478 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-- 68
           N  +  F +ANRLEKA   +     +G++P+VVTYN +I  YC     +    +L  M  
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340

Query: 69  ----------------------------------REAGISPDVVTYNSLIAGATRNSLLS 94
                                             +E G+ PD VTYN+LI   T++    
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIM 153
            +L  L +  E G   D   Y++++H L + G+  EA  +  +M+  G   P   T+  +
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NG C+    D A ++ + +  HG  P  V+Y  L+ G+C+ G+   AR ++    +   
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +PN+ITY+ IM    R  K     +++  M  KG+         ++ +  + GR  EA  
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           +ME+ +  G  +++V++ T+I+ +C+  +L+AA  +LD+M       D +T+T L+D L 
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVKDSFTY 391
           K G I  A   ++ M   G D     Y  ++ R  + GK+D  + + E M    K    Y
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY 700

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + ++  LC   +L  A  LL   L++  R       A+++G    G    A K+  ++
Sbjct: 701 NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 183/387 (47%), Gaps = 6/387 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D + Y  +++   +         +L  M+  GI      ++ ++   +R   L  +L +L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M   G+ P++   N+ +    +  + ++A R  + M    + P   T+N M+ G C  
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAIT 219
              + A+ +   +   G +P+ V+Y  ++  LCK  R+   R ++K++  + G  P+ +T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    ++      L  L   + KG+  D  GY  ++ A  K GR+ EA D + +M+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445

Query: 280 TDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           + G    D+V+Y  ++N +C+ G+++ A  LL  M   G + +  ++T L++G+C+ G  
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSM 394
             AR  +    +  +  N   Y+ I+  L ++GK+  A +V   M +K  F      + +
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRI 421
           + +LC+  R   A K +  CL  G  I
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAI 592



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 139/299 (46%), Gaps = 6/299 (2%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ML  L K +    + R+   +++ G       ++ ++    +AG+LR A  +L  +  +G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN +   T +    R  + +  L  L  M+  G   +   Y  +I  +  + R++EA 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDG 331
           + +E M + G   D VSY T++   CKE ++     L+ +M K+ G   D+ T+  LI  
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----- 386
           L K  +   A   L+   + GF  +   Y+ IV  L K+G++  A ++   M  K     
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           D  TY+++V+  C+   +  A KLL      G +    +  A+++G+  +G   EA+++
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 2/149 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ + + C+  R  +A   + + +  G   +VV +  +I  +CQ    DA  ++L+ M 
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                 DV TY +L+    +   ++ + +L+ +ML  GI P   +Y +++H   Q+GK D
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +   + + MI      C   +N ++  LC
Sbjct: 682 DLVAILEKMISRQ--KCRTIYNQVIEKLC 708



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y  D   Y +++    K    + +   +  M   G+     +++ ++  Y + G+L  A 
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L  M++ G E +       ID   +A  ++ A   LE M  +G   N+  YNC++   
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
               +++ AI + E M  K    D  +Y +++  LCK KR+     L+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 214/416 (51%), Gaps = 7/416 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FC++++   A + +   ++LG  PD+VT+  LI+ +C     +   +++N+M E
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDVV Y ++I    +N  ++ +L L D+M   GI PDV  Y SL++ L   G+  +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + + M    + P   TFN +++   K     +A  ++  + +    P + TY  LI 
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  G +  AR +   +   G  P+ + YT+++    + +K    ++I   M +KG T 
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F ++G+   A +    MV+ GV  +I +YN L++  C  GK++ A ++ 
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 311 DEMEKQ---GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           ++M+K+   G   + +T+ +L+ GLC  G ++ A +  E M K   D  +  Y  I+  +
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            K GK+ +A+N+F S+  K    +  TY++M+  L +      A  L     + GV
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 226/464 (48%), Gaps = 27/464 (5%)

Query: 7   TRLLNICVCTFCKANRLEKAEAII--IDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           T+LLN+         +++K + +I   D ++ +GV  D+ T N+L++ +CQ        +
Sbjct: 76  TKLLNVIA-------KMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L +M + G  PD+VT+ SLI G    + +  ++ ++++M+EMGI PDV  Y +++  L 
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  + A  +F  M    + P    +  ++NGLC +    +A  + RG+ K    P+++
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI-----MKCCFRNRKYKLGLE 238
           T+N LI    K G+   A  +  E+     APN  TYT++     M+ C    +     +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR-----Q 303

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+ KG   D   Y ++I  F K  ++ +A     +M   G+  + ++Y TLI  + 
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD---S 355
           + GK   A  +   M  +G   +  T+ +L+  LC  G +K A +  E M K   D    
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLL 411
           N+  YN ++  L  +GK++ A+ VFE M  ++      TY+ ++  +CKA ++ +A  L 
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            S    GV+        ++ GL   G + EA  +  K++   +S
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 42/394 (10%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           + F+    +   M E+   P ++ +  L+    +       ++L D +  MG+  D+++ 
Sbjct: 51  LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG------------------- 156
           N LM+C  Q  +P  A+     M+     P   TF  ++NG                   
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170

Query: 157 ----------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
                           LCKN + + AL +F  ++ +G  P++V Y  L+ GLC +GR R 
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +L+ +      P+ IT+  ++    +  K+    E+ + M R     + F Y ++I 
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            F   G + EA      M T G   D+V+Y +LIN +CK  K++ A  +  EM ++G   
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  T+T LI G  + G    A+    +M   G   N+  YN ++  L  +GK+  A+ +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 381 ESMEVKDS-------FTYSSMVHNLCKAKRLPSA 407
           E M+ ++        +TY+ ++H LC   +L  A
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/300 (20%), Positives = 137/300 (45%), Gaps = 5/300 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F +  N L K   +  AL   R L    +V     Y  +++    + +   A  +   + 
Sbjct: 6   FQLHRNRLVKGN-SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMV 64

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           +S   P+ I +T ++    + +K+ + + +   ++  G + D +    ++  F +  +  
Sbjct: 65  ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A+ ++ +M+  G + DIV++ +LIN +C   ++E A  ++++M + G + D   +T +I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           D LCK G++  A    + M   G   ++  Y  +V+ L   G+   A ++   M  +   
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  T+++++    K  +   A +L    ++  +        ++++G    GC  EA+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 209/421 (49%), Gaps = 8/421 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   + N  +   CKA +   A  ++      G    VVTY  LID  C+    DA   
Sbjct: 7   RLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQA 66

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M +AG +P+VVTY +LI G  +      ++  +  ML  G  PD+ +YNSL+H L 
Sbjct: 67  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 126

Query: 124 QLGKPDEANRVFQD-MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              + D+A  V Q+ MI     P   T+N  ++GLCK    D  L M   + + G  P++
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT+  +I GLCKA R+  A  + K + + G  P+++TY+ ++    R  +     E+L  
Sbjct: 187 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEH 246

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M + G+      Y  +I A ++ G ++ A+   EQ +  G  +++ ++N  I   C+ GK
Sbjct: 247 MVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGK 306

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 361
              A  +L  M + G   +  ++  +IDGLCK+GN+  A +L  + ++      ++  +N
Sbjct: 307 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
            ++    K G++  A  + + M+ K     D  TY++M+    K   L  A KLLL  ++
Sbjct: 367 TLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQA-KLLLEEMQ 425

Query: 417 S 417
           +
Sbjct: 426 A 426



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 171/374 (45%), Gaps = 73/374 (19%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+  L+ A+A++      G  P+VVTY  LID  C+          + RM  +G  PD
Sbjct: 55  LCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114

Query: 77  VVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VTYNSLI G    N +    L L + M+E G  PDV +YN+ +  L + GK D+   + 
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML 174

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M  G ++P   TF  +++GLCK    D+A ++F+G+ + G VP+ +TY+I++  L +A
Sbjct: 175 EEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRA 234

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCF--------------------------- 228
            RL T   +L+ +  SGH   + TY  ++                               
Sbjct: 235 NRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTH 294

Query: 229 --------RNRKYKLGLEILSAMKRKG---------YTFDGF------------------ 253
                   R+ K+ L   IL  M   G         +  DG                   
Sbjct: 295 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 354

Query: 254 -GYC--------TVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKL 303
            G C        T+I+ F K GRL +A   +++M    + + D+V+YNT+I+   K G L
Sbjct: 355 SGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSL 414

Query: 304 EAAYLLLDEMEKQG 317
           + A LLL+EM+  G
Sbjct: 415 KQAKLLLEEMQAVG 428



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
           D   YN+L+  L +  KP  A  +   M          T+  +++GLCK+   D A  + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFR 229
           + +   G  P +VTY  LI GLCKA R   A   +K +  SG  P+ +TY +++   C  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
           NR    GL +   M   G   D   Y T I+   K G+L +  + +E+M   G+  D+V+
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           + ++I+  CK  +++ A+ +   M ++G   D  T++I++D L +A  +      LE+M 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE-SME---VKDSFTYSSMVHNLCKAKRLP 405
           K G  +    Y  ++  L + G I+ A   +E +ME   V + +T+++ +  LC++ + P
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            A  +LL  ++SG      +   V+DGL  SG   +A K+  K+
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 352



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 5/182 (2%)

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  + +  D   Y T+IA   K  + + A + +  M  +G    +V+Y TLI+  CK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+AA  LL +M   G   +  T+T LIDGLCKA     A   ++ M + G + +L  YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 363 IVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           ++  L    ++D A  V      ES  + D  TY++ +  LCKA +L    ++L    + 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 418 GV 419
           G+
Sbjct: 181 GI 182


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 211/439 (48%), Gaps = 8/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C+   + +A  +++  ++ G  P++ TY +LI   C+         +L+ M  
Sbjct: 257 TILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPR 316

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V TYN++I G  ++  L  +L +   M   G  PD W+YNSL+H L   GKPDE
Sbjct: 317 RGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDE 375

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +    I    +P   TF  ++NG CK    D+ALR+   +       +L  Y +LI 
Sbjct: 376 AEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLIS 435

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K  RL+ A+  L E+  +G +PN + YT+I+    +  K    LE+    + +G   
Sbjct: 436 VLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRP 495

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y ++I   ++  +L +A   + +M  DG+   +++Y TLI   CK+ + + A+ L 
Sbjct: 496 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 555

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + ME+ G   D+  + +L D LCK+G  + A     ++ K G       Y  +VD   K 
Sbjct: 556 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKA 612

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  + A  + E M  +    DS TYS ++  LCK K+L  A  +L      GV+    A 
Sbjct: 613 GNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAY 672

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++  +   G    AK +
Sbjct: 673 TIIISEMIKEGKHDHAKSM 691



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 201/460 (43%), Gaps = 43/460 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+  A  ++ +  R GV+P V TYN +ID YC+         I   M   G +PD
Sbjct: 298 LCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPD 357

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-------------------------- 110
             TYNSLI G           +LL+  +  G  P                          
Sbjct: 358 DWTYNSLIHGLCGGKPDEAE-ELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKS 416

Query: 111 ---------DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                    D+ +Y  L+  L +  +  EA     ++    L+P    +  +++  CK  
Sbjct: 417 IMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVG 476

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               AL +F+  +  G  P   TY+ LI GL +  +L  A  ++ ++ + G  P  ITYT
Sbjct: 477 KVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYT 536

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T+++   +  ++     +   M++ G T D   Y  +  A  K GR +EA  +   +V  
Sbjct: 537 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKK 593

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV L  V+Y +L++ + K G  E A  L+++M  +G + D +T+++L+  LCK   +  A
Sbjct: 594 GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEA 653

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
              L+ M   G   N+ AY  I+  + K+GK DHA ++F  M        + TY+  + +
Sbjct: 654 LSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISS 713

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            CK  R+  A  L+    ++GV          ++G  H G
Sbjct: 714 YCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMG 753



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 200/429 (46%), Gaps = 25/429 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL  +   + +    K +RL++A+  + +    G+ P+VV Y  +IDAYC+     A   
Sbjct: 424 KLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALE 483

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +       G  P+  TY+SLI G  ++  L  ++ L+ +M E GI P V +Y +L+    
Sbjct: 484 VFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQC 543

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D A R+F+ M    LTP    +N++ + LCK+   + A   +  L K G V   V
Sbjct: 544 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKV 600

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ G  KAG    A  +++++ + G   ++ TY+ +++   + +K    L IL  M
Sbjct: 601 TYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM 660

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   +   Y  +I+  +K G+   A     +M++ G +   ++Y   I+ YCK G++
Sbjct: 661 TLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRI 720

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L+ EME+ G   D  T+ + I+G    G +  A   L+ M     + N   Y  +
Sbjct: 721 EEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLL 780

Query: 364 VDRLGKDG----------------KIDHAINVFESMEVKD-----SFTYSSMVHNLCKAK 402
           +    K                  K+D    + E M VK      + TYSS++   CKA 
Sbjct: 781 LKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERM-VKHGLNPTAVTYSSIIAGFCKAT 839

Query: 403 RLPSASKLL 411
           RL  A  LL
Sbjct: 840 RLEEACVLL 848



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 214/472 (45%), Gaps = 43/472 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS +  N+ + +  + +  E    +    ++ G+LPD VTYN +I AYC+  S    +  
Sbjct: 146 LSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRY 205

Query: 65  LNRMREAGISPDVVTYNSLIAGATRN-------------SLLSC---------------- 95
              +RE+G+  D  T N+L+ G  R               L+ C                
Sbjct: 206 FRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCE 265

Query: 96  ------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 +L LL  ML+ G  P++ +Y  L+  L + G+  +A  +  +M    + P   T
Sbjct: 266 TRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWT 325

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N M++G CK+    +AL +   ++ +G  P+  TYN LI GLC  G+   A  +L    
Sbjct: 326 YNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAI 384

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G +P  IT+T I+    +  K    L + S M       D   Y  +I+  +K  RLK
Sbjct: 385 ARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLK 444

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA D + ++  +G+  ++V Y ++I+ YCK GK+ AA  +    E +G   + +T++ LI
Sbjct: 445 EAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
            GL +   +  A   +  M + G    +  Y  ++    K  + D+A  +FE ME     
Sbjct: 505 YGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 564

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            D   Y+ +   LCK+ R   A   L   +K GV + K    ++VDG   +G
Sbjct: 565 PDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAG 613



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 181/395 (45%), Gaps = 38/395 (9%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD------------------AGYTIL 65
           ++AE ++   I  G  P V+T+  +I+ YC+    D                    Y +L
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433

Query: 66  -------NRMREA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
                  +R++EA          G+SP+VV Y S+I    +   +  +L++       G 
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            P+ W+Y+SL++ L Q  K  +A  +   M    +TP   T+  ++ G CK    DNA R
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 553

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  ++++G  P+   YN+L   LCK+GR   A   L +    G     +TYT+++    
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDGFS 610

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +    +    ++  M  +G   D   Y  ++ A  K  +L EA   ++QM   GV+ +IV
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y  +I+   KEGK + A  + +EM   G +    T+T+ I   CK G I+ A   +  M
Sbjct: 671 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM 730

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            + G   ++  YN  ++  G  G +D A +  + M
Sbjct: 731 ERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRM 765



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 190/411 (46%), Gaps = 23/411 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+     CK+ R E+A + ++   + GV+   VTY  L+D + +  + +    ++ +M  
Sbjct: 571 NVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVN 627

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D  TY+ L+    +   L+ +L +LD+M   G+  ++ +Y  ++  + + GK D 
Sbjct: 628 EGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDH 687

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +MI     P   T+ + ++  CK    + A  +   ++++G  P++VTYN+ I 
Sbjct: 688 AKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFIN 747

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----NRKY----------KLG 236
           G    G +  A   LK + D+   PN  TY  ++K   +    N  Y          KL 
Sbjct: 748 GCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLD 807

Query: 237 --LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++L  M + G       Y ++IA F K  RL+EA   ++ M+   +  +   Y  LI
Sbjct: 808 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
              C     E A   +  M + GF+    ++  LI GLC  G+   A+     + ++ ++
Sbjct: 868 KCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYN 927

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
            N  A+  + D L K G +D    +  +ME +    DS TYS + +N+ +A
Sbjct: 928 HNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEA 978



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 148/355 (41%), Gaps = 21/355 (5%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           YN  +  L +    +   +++  ++   L P T T+N M+   CK      A R FR L+
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           + G   +  T N L+ G C+ G LR A W+L  +   G   N  +YT +++     R  +
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L +L  M + G + +   Y  +I    K GR+ +A   +++M   GV   + +YN +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           + YCK G+L+ A  +   ME  G   D +T+  LI GLC  G    A   L      GF 
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFS 389

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
             +  +  I++   K  KID A+ V   M       D   Y  ++  L K  RL  A   
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449

Query: 411 LLSCLKSGVRILKSAQKAVVDGL----------------RHSGCRREAKKIQSKI 449
           L     +G+        +++D                   H GCR  A    S I
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +   LE A ++  +    G+ PD+VTYN LID Y +        ++   M++
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  PDV+TYNSLI    +   +  + + L  M + G+ P+V +Y++L+    + G   E
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN+ F DMI   L P   T+  +++  CK    + A ++   +Q+ G    +VTY  L+ 
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ GR+R A  +   L  +G   N   YT++     + +  +  ++IL  M +K    
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T I    +   ++++   + +M+  G+  +   Y TLI+ Y K GK   A  LL
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+  G +    T+ +LIDGLCK G ++ A  + ++M + G   N+  Y  ++D L K+
Sbjct: 555 QEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             ++ A N+F  M  K    D   Y+S++    K      A  L    ++ G+ +   A 
Sbjct: 615 DCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAY 674

Query: 427 KAVVDGLRHSGCRREAKKI 445
            +++ G    G  + AK +
Sbjct: 675 TSLIWGFSRYGQVQLAKSL 693



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 205/427 (48%), Gaps = 6/427 (1%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D +  G+ P V TYNM+I    +    +A  ++   M+  G+ PD+VTYNSLI G  +  
Sbjct: 241 DMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVG 300

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
           +L+ ++ + +EM + G  PDV +YNSL++C  +  +  +A      M    L P   T++
Sbjct: 301 MLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYS 360

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++  CK      A + F  + + G  P   TY  LI   CK G L  A  +  E+  +
Sbjct: 361 TLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G   N +TYT ++     + + +   E+  A+ + G+T +   Y ++   ++K   +++A
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKA 480

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D +E+M    ++ D++ Y T I   C++ ++E +  ++ EM   G   + Y +T LID 
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDA 540

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
             K G    A   L+ M  +G    +  Y  ++D L K G +  A+  F+ M       +
Sbjct: 541 YFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              Y++++  LCK   L  A  L    L  G+   K    +++DG    G   EA  +++
Sbjct: 601 IMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN 660

Query: 448 KIRMAKI 454
             RM +I
Sbjct: 661 --RMVEI 665



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 202/448 (45%), Gaps = 9/448 (2%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FG   T L N+ V        LE+A        +  VLP V + N L+    +       
Sbjct: 181 FGVFDT-LFNVLV----DLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            +    M  AG+SP V TYN +I    R   L  +  L +EM   G+ PD+ +YNSL+  
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             ++G    A  VF++M      P   T+N ++N  CK      A     G+++ G  P 
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VTY+ LI   CKAG L  A     ++   G  PN  TYT+++    +        ++ S
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M++ G   +   Y  ++    + GR++EA +    ++  G  L+   Y +L + Y K  
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            +E A  +L+EM K+  + D   +   I GLC+   I+ +   +  M   G  +N   Y 
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 362 CIVDRLGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D   K GK   A+N+ + M+   +K +  TY  ++  LCK   +  A +      ++
Sbjct: 536 TLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRN 595

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKI 445
           G++       A++DGL  + C  EAK +
Sbjct: 596 GLQPNIMIYTALIDGLCKNDCLEEAKNL 623



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 192/408 (47%), Gaps = 35/408 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  + K   L  A ++  +    G  PDV+TYN LI+ +C+F      +  L+ M++
Sbjct: 290 NSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQ 349

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTY++LI    +  +L  +     +M+ +G+ P+ ++Y SL+    ++G  +E
Sbjct: 350 RGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNE 409

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--------------H 176
           A ++  +M    +     T+  +L+GLC++     A  +F  L K              H
Sbjct: 410 AFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFH 469

Query: 177 GFV---------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G++                     P+L+ Y   I GLC+   +  +  +++E+ D G   
Sbjct: 470 GYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTA 529

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N+  YTT++   F+  K    + +L  M+  G       Y  +I    KIG +++A  Y 
Sbjct: 530 NSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYF 589

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M  +G+Q +I+ Y  LI+  CK   LE A  L +EM  +G   DK  +T LIDG  K 
Sbjct: 590 DHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKH 649

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           GN   A      M +IG + +L AY  ++    + G++  A ++ + M
Sbjct: 650 GNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 155/307 (50%), Gaps = 6/307 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P    +++L + L  LG  +EA + F  M    + P   + N +L+ L K+     AL  
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F+ +   G  P + TYN++I  L + G L  AR + +E+   G  P+ +TY +++    +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
                  + +   MK  G   D   Y ++I  F K  R+ +A +Y+  M   G+Q ++V+
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y+TLI+ +CK G L  A     +M + G + +++T+T LID  CK G++  A      M 
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRL 404
           + G + N+  Y  ++D L +DG++  A  +F ++ +K  +T     Y+S+ H   KAK +
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGAL-LKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 405 PSASKLL 411
             A  +L
Sbjct: 478 EKAMDIL 484



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 179/399 (44%), Gaps = 12/399 (3%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCKA  L +A    +D IR+G+ P+  TY  LIDA C+    +  + + + M++AG++ 
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++VTY +L+ G   +  +  + +L   +L+ G   +   Y SL H   +    ++A  + 
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M   +L P    +   + GLC+    ++++ + R +   G       Y  LI    K 
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+   A  +L+E+ D G     +TY  ++    +    +  +     M R G   +   Y
Sbjct: 545 GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIY 604

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    K   L+EA +   +M+  G+  D + Y +LI+   K G    A  L + M +
Sbjct: 605 TALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G E D   +T LI G  + G ++ A+  L+ M + G   +     C++ +  + G I+ 
Sbjct: 665 IGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINE 724

Query: 376 AINVFESME------------VKDSFTYSSMVHNLCKAK 402
           A+ + + M             V    T  + +H LC ++
Sbjct: 725 ALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 152/314 (48%), Gaps = 5/314 (1%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LNI   T      C+  R+ +AE +    ++ G   +   Y  L   Y +    +    I
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M +  + PD++ Y + I G  R + +  S+ ++ EM++ G+  + + Y +L+   F+
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFK 543

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +GK  EA  + Q+M    +     T+ ++++GLCK      A+R F  + ++G  P ++ 
Sbjct: 544 VGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMI 603

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCK   L  A+ +  E+ D G +P+ + YT+++    ++      L + + M 
Sbjct: 604 YTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMV 663

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y ++I  F + G+++ A   +++M+  G+  D V    L+  Y + G + 
Sbjct: 664 EIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDIN 723

Query: 305 AAYLLLDEMEKQGF 318
            A  L D+M ++G 
Sbjct: 724 EALALHDDMARRGL 737



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 4/292 (1%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P    F+ + N L      + A + F  + K   +P++ + N L+  L K+ +   A   
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            K++  +G +P+  TY  ++ C  R    +    +   MK KG   D   Y ++I  + K
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           +G L  A    E+M   G + D+++YN+LIN +CK  ++  A+  L  M+++G + +  T
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ++ LID  CKAG +  A      M ++G   N   Y  ++D   K G ++ A  +   M+
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
                 +  TY++++  LC+  R+  A +L  + LK+G  + +    ++  G
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHG 470



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 4/189 (2%)

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A  + + MV  G+   + +YN +I    +EG LEAA  L +EM+ +G   D  T+  LID
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G  K G + GA    E M   G + ++  YN +++   K  +I  A      M+ +    
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           +  TYS+++   CKA  L  A+K  +  ++ G++  +    +++D     G   EA K++
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 447 SKIRMAKIS 455
           S+++ A ++
Sbjct: 415 SEMQQAGVN 423



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++     + +   CK   +++A        R G+ P+++ Y  LID  C+    +    
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + N M + GISPD + Y SLI G  ++     +L L + M+E+G+  D+ +Y SL+    
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFS 682

Query: 124 QLGKPDEANRVFQDMICGDLTP 145
           + G+   A  +  +M+   + P
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIP 704


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 194/368 (52%), Gaps = 3/368 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+L+    +     +   + + M+  G+   VV++N++I+G  R   L  +
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L   M E G+ PDV++Y +L+  L ++G+ ++A  VF+ M    + P    F I+++ 
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    +  L + R +++ G  P+ VTYN ++ GLC+A  L++A  I+ E+  +G  P+
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYTT++    +  +  + +EI   M  +G   D   Y  +I+   K GR  +A   + 
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G++ D  +Y  +I+ +C++G ++    LL EM+ +G +    T+ ++++G CK G
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 410

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--VKDSFTYSSM 394
            +K A + L  M  IG   +   YN ++D   K GK+   I   +S +  V D   Y+S+
Sbjct: 411 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD-IEELKSAKGTVPDLGVYTSI 469

Query: 395 VHNLCKAK 402
           V  + K K
Sbjct: 470 VGEIVKKK 477



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           ++L+ G+PP+   +N LM  L +LG+   A  VF +M    +     +FN M++G+C+  
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A  + R + + G  P++ TY  LI+GLC+ GR+  AR + +++   G  PNA+ +T
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +    +  LE+   M+ +G   D   Y  ++    +   LK A+  + +M + 
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D V+Y TLI+ YCKE +L+ A  +   M  +G   D+ T+T LI GL KAG    A
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 397
              L  M + G + +   Y  ++D   + G +   + + + M+ K       TY+ +++ 
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
            CK  ++ +A  LL + +  GV
Sbjct: 406 FCKLGQMKNADMLLNAMINIGV 427



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 143/294 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+A  L+ AE +       GV PDV TY  LI   C+    +    +  +M 
Sbjct: 154 FNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC 213

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+ V +  LI    +       L+L  EM E G+ PD  +YN++++ L +     
Sbjct: 214 GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLK 273

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A+ +  +M    L P T T+  +++G CK    D A+ + + +   G   + VTY  LI
Sbjct: 274 SASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALI 333

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL KAGR   A  +L E+ ++G  P+  TYT ++    R    K GL +L  M+ KG  
Sbjct: 334 SGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRK 393

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                Y  ++  F K+G++K A   +  M+  GV  D ++YN L++ +CK GK+
Sbjct: 394 PGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 447



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            V++G L  A +  ++M + GV+  +VS+NT+I+  C+ G L+ A  L   M + G   D
Sbjct: 126 LVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPD 185

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            YT+  LI GLC+ G I+ AR   E M   G   N   +  ++D   K G  +  + +  
Sbjct: 186 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHR 245

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M  +    D+ TY+++V+ LC+A+ L SAS +++    +G+R        ++DG     
Sbjct: 246 EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGY---- 301

Query: 438 CRREAKKIQSKIRMAKISH 456
           C+ E   +  +I+   ++ 
Sbjct: 302 CKEEELDMAMEIKQNMVAE 320



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  PE   +N+L++ L + G L +A+ +  E+   G     +++ T++    R       
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             +   M   G T D + Y  +I    ++GR+++A    E+M   G++ + V +  LI+ 
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +CK+G  E    L  EM ++G   D  T+  +++GLC+A ++K A   +  M   G    
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP- 289

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
                                         D+ TY++++   CK + L  A ++  + + 
Sbjct: 290 ------------------------------DTVTYTTLIDGYCKEEELDMAMEIKQNMVA 319

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            GV + +    A++ GL  +G   +A+++  ++  A + 
Sbjct: 320 EGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 358


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 5/364 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  I  + I  G+ P++VTYN LI   C+   +    T++N M ++ I P
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           DV T N+++    +  +++ + D++D M+  G+ P+V +YN+LM  HCL    + D A +
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL--RNEVDVAVK 336

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+  D      ++N ++NG CK +  D A+ +F  + +    P  VTYN LI GLC
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+ +TY T+     +NR     + +L A++   +  D  
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++    + G L++A D    + + G+Q ++ +YN +I+  CK+G L  A  L  EM
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K G   +  T+ ++  G  +          LE M   GF  ++     +V  L  DG +
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-L 575

Query: 374 DHAI 377
           D ++
Sbjct: 576 DQSV 579



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 200/423 (47%), Gaps = 41/423 (9%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T  ++I++ C     D  ++ L ++ + G  PD  T+ +LI G      +  
Sbjct: 99  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  P+V +Y +L++ L ++G    A R+ + M  G+  P    F+ +++
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLID 218

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS---- 211
            LCK+R    A  +F  +   G  P +VTYN LI GLCK    +    ++ E+ DS    
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 212 -------------------------------GHAPNAITYTTIMKC-CFRNRKYKLGLEI 239
                                          G  PN +TY  +M   C RN +  + +++
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKV 337

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  K    +   Y T+I  + KI  + +A    E+M    +  + V+YNTLI+  C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G+L+ A  L  EM  +G   D  T+  L D LCK  ++  A   L+ +    +D +++ 
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  I+D + + G+++ A ++F ++  K    + +TY+ M+H LCK   L  ASKL     
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 416 KSG 418
           K+G
Sbjct: 518 KNG 520



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 197/436 (45%), Gaps = 4/436 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   ++ +A  +    I  G  P+VVTY  LI+  C+  +  A   +L  M +    P+
Sbjct: 150 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV +++LI    ++  ++ + ++  EM+  GI P++ +YNSL+H L +L +      +  
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T N +++ LCK      A  +   +   G  P +VTYN L+ G C   
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +   +       N I+Y T++    + +     + +   M R+  T +   Y 
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I     +GRL++A     +MV  G   D+V+Y TL +  CK   L+ A  LL  +E  
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
            ++ D   +T ++DG+C+AG ++ AR     ++  G   N+  YN ++  L K G +  A
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +F  M       +  TY+ +     +        +LL   L  G  +  S    +V  
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569

Query: 433 LRHSGCRREAKKIQSK 448
           L   G  +  K+I  K
Sbjct: 570 LSDDGLDQSVKQILCK 585



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 173/379 (45%), Gaps = 4/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           ++N        F + D   +  NRM      P  V +N L+    +    S  L L  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GIPPDV++   +++ L  L + D A      ++     P   TF  ++ GLC     
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  +   GF P +VTY  LI GLCK G    A  +L+ +      PN + ++T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++R+      I S M  KG + +   Y ++I    K+   K  T  M +MV   +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+ + NT+++  CKEG +  A+ ++D M  +G E +  T+  L+DG C    +  A  
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
             + M      +N+ +YN +++   K   +D A+ +FE M       ++ TY++++H LC
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 400 KAKRLPSASKLLLSCLKSG 418
              RL  A  L    +  G
Sbjct: 397 HVGRLQDAISLFHEMVARG 415



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  V +N L+ +  +        ++  +M   GI PDV T   +I      + +  +   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  ++ +L+  L   GK  EA  +F  MI     P   T+  ++NGLCK
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R +++    P +V ++ LI  LCK  ++  A  I  E+   G +PN +T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++    +  ++K    +++ M       D F   TV+ A  K G + EA D ++ M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ ++V+YN L++ +C   +++ A  + D M  +    +  ++  LI+G CK  ++ 
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M++     N   YN ++  L   G++  AI++F  M    ++ D  TY ++ 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK + L  A  LL +   S           ++DG+  +G   +A+ + S +
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 141/292 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V   CK   + +A  ++   I  GV P+VVTYN L+D +C     D    + + M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                 +V++YN+LI G  +   +  ++ L +EM    + P+  +YN+L+H L  +G+  
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F +M+     P   T+  + + LCKNR+ D A+ + + ++   + P++  Y  ++
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+C+AG L  AR +   L   G  PN  TY  ++    +        ++ S M + G +
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            +   Y  +   F++        + +E+M+  G  +D+ +   L+ +   +G
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 41/378 (10%)

Query: 106 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           + +PP   S  +N+           DEA   F  M+     P T  FN +L  + K ++ 
Sbjct: 27  LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 86

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              L + R +   G  P++ T  I+I  LC   R+  A   L ++   GH P+A T+TT+
Sbjct: 87  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 146

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG----------------- 266
           ++      K    L +   M  +G+  +   Y T+I    K+G                 
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 206

Query: 267 ------------------RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                             ++ EA +   +M+T G+  +IV+YN+LI+  CK  + +    
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L++EM       D +T   ++D LCK G +  A   ++ M   G + N+  YN ++D   
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326

Query: 369 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              ++D A+ VF++M  KD      +Y+++++  CK + +  A  L     +  +     
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386

Query: 425 AQKAVVDGLRHSGCRREA 442
               ++ GL H G  ++A
Sbjct: 387 TYNTLIHGLCHVGRLQDA 404



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 93/195 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   RL+ A ++  + +  G +PD+VTY  L D  C+    D    +L  +  
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +   PD+  Y +++ G  R   L  + DL   +   G+ P+VW+YN ++H L + G   E
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++F +M     +P   T+N++  G  +N      + +   +   GF  ++ T  +L+ 
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568

Query: 191 GLCKAGRLRTARWIL 205
            L   G  ++ + IL
Sbjct: 569 MLSDDGLDQSVKQIL 583


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 210/448 (46%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+VTY+ ++ A C+  + D     L +M  
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD  TYN+LI G +       ++ +  EM    I PDV + N+LM  L + GK  E
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++ IMLNG        +   +F  +   G  P + T+N+LIK
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 404

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  P+ +TY T++    R  K    +E  + M  +G   
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G L +A + + +++ +G++LDIV + ++IN  CK G++  A  + 
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G   D   + +L+DG C  G ++ A    + M   G + N+  Y  +V+   K 
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  M  K     +  Y+ ++  L +A R   A        +SG+ + K   
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 644

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             V+ GL  + C  EA  +  ++R   +
Sbjct: 645 SIVLRGLFKNRCFDEAIFLFKELRAMNV 672



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 192/425 (45%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  D +  + L+  +C+    D    IL +R  E G 
Sbjct: 123 CT--RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGC 180

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +YN L+           + DLL  M E G    PDV +YN+++   F+ G  ++A
Sbjct: 181 VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 240

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T++ +++ LCK R  D A    R +   G +P+  TYN LI G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +   T+M    +  K K   ++   M  KG   D
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+   I ++N LI  Y   G L+ A ++ +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G +    T+  +I  LC+ G +  A      M   G   +  AY+C++      G
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   + S+++NLCK  R+  A  +    +  G+        
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 428 AVVDG 432
            ++DG
Sbjct: 541 MLMDG 545



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 206/447 (46%), Gaps = 39/447 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  + + CK  ++++A  +       G  PDV +Y ++++ Y           + + M 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+P + T+N LI       +L  ++ + +EM + G+ P V +Y +++  L ++GK D
Sbjct: 389 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A   F  MI   + P    ++ ++ G C +     A  +   +  +G   ++V +  +I
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSII 508

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GR+  A+ I     + G  P+A+ Y  +M                         
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD------------------------ 544

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               GYC V       G++++A    + MV+ G++ ++V Y TL+N YCK G+++    L
Sbjct: 545 ----GYCLV-------GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 593

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM ++G +     + I+IDGL +AG    A++    M + G   N   Y+ ++  L K
Sbjct: 594 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 653

Query: 370 DGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +   D AI +F+   +M VK D  T ++M+  + + +R+  A  L  S  +SG+      
Sbjct: 654 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMA 452
              ++  L   G   EA+ + S ++ A
Sbjct: 714 YSIMITNLIKEGLVEEAEDMFSSMQNA 740



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 159/340 (46%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C+  +++ A       I  GV+PD   Y+ LI  +C   S      +++ +   G+
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             D+V + S+I    +   +  + ++ D  + +G+ PD   YN LM     +GK ++A R
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+   + P    +  ++NG CK    D  L +FR + + G  P  + YNI+I GL 
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +AGR   A+    E+ +SG A N  TY+ +++  F+NR +   + +   ++      D  
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
              T+IA   +  R++EA D    +   G+    V+Y+ +I    KEG +E A  +   M
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM 737

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +  G E D      ++  L K   I  A  +L  +++  F
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF 777



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 173/389 (44%), Gaps = 7/389 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD- 98
           P   TY +L+D   +    +       ++   G+  D +  + L+ G         +LD 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIMLNG 156
           LL    E+G  PDV+SYN L+  L   GK  +A+ + + M  G    +P    +N +++G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    + A  +F+ + + G  P+LVTY+ ++  LCKA  +  A   L+++ + G  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++       ++K  + +   M+R+    D     T++ +  K G++KEA D  +
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   D+ SY  ++N Y  +G L     L D M   G      T  +LI      G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A +    M   G   ++  Y  ++  L + GK+D A+  F  M     V D + Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            ++   C    L  A +L+   + +G+R+
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRL 499



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 183/417 (43%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + T+N+LI AY      D    I N MR+ G+ P VVTY ++IA   R   +  +
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++  ++M++ G+ PD ++Y+ L+      G   +A  +  +++   +      F  ++N 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A  +F      G  P+ V YN+L+ G C  G++  A  +   +  +G  PN
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y T++    +  +   GL +   M +KG       Y  +I    + GR   A     
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 630

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+ ++  +Y+ ++    K    + A  L  E+     + D  T   +I G+ +  
Sbjct: 631 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 690

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A+     +++ G       Y+ ++  L K+G ++ A ++F SM+      DS   +
Sbjct: 691 RVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 750

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 448
            +V  L K   +  A   L    +    +       +VD     G CR + + + +K
Sbjct: 751 HVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAK 807



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 152/323 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L KA+ +I + +  G+  D+V +  +I+  C+         I +     G+ PD
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V YN L+ G      +  +L + D M+  GI P+V  Y +L++   ++G+ DE   +F+
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P T  +NI+++GL +   T  A   F  + + G      TY+I+++GL K  
Sbjct: 596 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A ++ KEL       + IT  T++   F+ R+ +   ++ +++ R G       Y 
Sbjct: 656 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K G ++EA D    M   G + D    N ++    K+ ++  A   L +++++
Sbjct: 716 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775

Query: 317 GFECDKYTHTILIDGLCKAGNIK 339
            F  +  T  +L+D     G  +
Sbjct: 776 NFSLEHLTAMLLVDLFSSKGTCR 798



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 166/384 (43%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P  ++Y  LM C  +  +P+ A   F  ++   L       + +L G C+ + TD AL
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +YNIL+K LC  G+   A  +L+ + + G   +P+ + Y T++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV  GV 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D  +YN LI  Y   G+ + A  +  EM +Q    D      L+  LCK G IK AR  
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 345 LEYMNKIGFDSNLEAYN----------CIVD-------RLGKD----------------- 370
            + M   G + ++ +Y           C+VD        LG                   
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 371 -GKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK    TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEI 492



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 34/244 (13%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P + TY  +M CC R  + +L L     + R G   D      ++  F +  R  EA D
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 274 YMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 330
            +     + G   D+ SYN L+   C +GK   A  LL  M + G  C  D   +  +ID
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G  K G++  A    + M + G   +L                                T
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDL-------------------------------VT 258

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           YSS+VH LCKA+ +  A   L   +  GV         ++ G   +G  +EA ++  ++R
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 318

Query: 451 MAKI 454
              I
Sbjct: 319 RQSI 322



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L NI +    +A R   A+    +    G+  +  TY++++    +   FD    
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  D++T N++IAG                                   +F
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAG-----------------------------------MF 687

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  + +EA  +F  +    L PC  T++IM+  L K    + A  MF  +Q  G  P+  
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 747

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             N +++ L K   +  A   L ++ +   +   +T
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 218/477 (45%), Gaps = 41/477 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-- 68
           N  +  F +ANRLEKA   +     +G++P+VVTYN +I  YC     +    +L  M  
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340

Query: 69  ----------------------------------REAGISPDVVTYNSLIAGATRNSLLS 94
                                             +E G+ PD VTYN+LI   T++    
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L  L +  E G   D   Y++++H L + G+  EA  +  +M C    P   T+  ++
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDC---PPDVVTYTAVV 457

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG C+    D A ++ + +  HG  P  V+Y  L+ G+C+ G+   AR ++    +   +
Sbjct: 458 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 517

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN+ITY+ IM    R  K     +++  M  KG+         ++ +  + GR  EA  +
Sbjct: 518 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 577

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME+ +  G  +++V++ T+I+ +C+  +L+AA  +LD+M       D +T+T L+D L K
Sbjct: 578 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 637

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVKDSFTYS 392
            G I  A   ++ M   G D     Y  ++ R  + GK+D  + + E M    K    Y+
Sbjct: 638 KGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYN 697

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++  LC   +L  A  LL   L++  R       A+++G    G    A K+  ++
Sbjct: 698 QVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 754



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 180/386 (46%), Gaps = 8/386 (2%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D + Y  +++   +         +L  M+  GI      ++ ++   +R   L  +L +L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M   G+ P++   N+ +    +  + ++A R  + M    + P   T+N M+ G C  
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAIT 219
              + A+ +   +   G +P+ V+Y  ++  LCK  R+   R ++K++  + G  P+ +T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    ++      L  L   + KG+  D  GY  ++ A  K GR+ EA D + +M 
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM- 444

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                 D+V+Y  ++N +C+ G+++ A  LL  M   G + +  ++T L++G+C+ G   
Sbjct: 445 --DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 502

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMV 395
            AR  +    +  +  N   Y+ I+  L ++GK+  A +V   M +K  F      + ++
Sbjct: 503 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 562

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRI 421
            +LC+  R   A K +  CL  G  I
Sbjct: 563 QSLCRDGRTHEARKFMEECLNKGCAI 588



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 2/295 (0%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ML  L K +    + R+   +++ G       ++ ++    +AG+LR A  +L  +  +G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN +   T +    R  + +  L  L  M+  G   +   Y  +I  +  + R++EA 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDG 331
           + +E M + G   D VSY T++   CKE ++     L+ +M K+ G   D+ T+  LI  
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-VKDSFT 390
           L K  +   A   L+   + GF  +   Y+ IV  L K+G++  A ++   M+   D  T
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVT 452

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y+++V+  C+   +  A KLL      G +    +  A+++G+  +G   EA+++
Sbjct: 453 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 507



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 2/149 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ + + C+  R  +A   + + +  G   +VV +  +I  +CQ    DA  ++L+ M 
Sbjct: 558 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 617

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                 DV TY +L+    +   ++ + +L+ +ML  GI P   +Y +++H   Q+GK D
Sbjct: 618 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 677

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +   + + MI      C   +N ++  LC
Sbjct: 678 DLVAILEKMISRQ--KCRTIYNQVIEKLC 704



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y  D   Y +++    K    + +   +  M   G+     +++ ++  Y + G+L  A 
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L  M++ G E +       ID   +A  ++ A   LE M  +G   N+  YNC++   
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
               +++ AI + E M  K    D  +Y +++  LCK KR+     L+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 186/364 (51%), Gaps = 5/364 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  I  + I  G+ P++VTYN LI   C+   +    T++N M ++ I P
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           DV T N+++    +  +++ + D++D M+  G+ P+V +YN+LM  HCL    + D A +
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL--RNEVDVAVK 336

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+  D      ++N ++NG CK +  D A+ +F  + +    P  VTYN LI GLC
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+ +TY T+     +NR     + +L A++   +  D  
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++    + G L++A D    + + G+Q ++ +YN +I+  CK+G L  A  L  EM
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K G   +  T+ ++  G  +          LE M   GF  ++     +V  L  DG +
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-L 575

Query: 374 DHAI 377
           D ++
Sbjct: 576 DQSV 579



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 200/423 (47%), Gaps = 41/423 (9%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T  ++I++ C     D  ++ L ++ + G  PD  T+ +LI G      +  
Sbjct: 99  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  P+V +Y +L++ L ++G    A R+ + M  G+  P    F+ +++
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLID 218

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS---- 211
            LCK+R    A  +F  +   G  P +VTYN LI GLCK    +    ++ E+ DS    
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 212 -------------------------------GHAPNAITYTTIMKC-CFRNRKYKLGLEI 239
                                          G  PN +TY  +M   C RN +  + +++
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN-EVDVAVKV 337

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  K    +   Y T+I  + KI  + +A    E+M    +  + V+YNTLI+  C 
Sbjct: 338 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 397

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G+L+ A  L  EM  +G   D  T+  L D LCK  ++  A   L+ +    +D +++ 
Sbjct: 398 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 457

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  I+D + + G+++ A ++F ++  K    + +TY+ M+H LCK   L  ASKL     
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517

Query: 416 KSG 418
           K+G
Sbjct: 518 KNG 520



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 198/437 (45%), Gaps = 4/437 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   ++ +A  +    I  G  P+VVTY  LI+  C+  +  A   +L  M +    P+
Sbjct: 150 LCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPN 209

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV +++LI    ++  ++ + ++  EM+  GI P++ +YNSL+H L +L +      +  
Sbjct: 210 VVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T N +++ LCK      A  +   +   G  P +VTYN L+ G C   
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +   +       N I+Y T++    + +     + +   M R+  T +   Y 
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I     +GRL++A     +MV  G   D+V+Y TL +  CK   L+ A  LL  +E  
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
            ++ D   +T ++DG+C+AG ++ AR     ++  G   N+  YN ++  L K G +  A
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +F  M       +  TY+ +     +        +LL   L  G  +  S    +V  
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +  K+I  KI
Sbjct: 570 LSDDGLDQSVKQILCKI 586



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 173/379 (45%), Gaps = 4/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           ++N        F + D   +  NRM      P  V +N L+    +    S  L L  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GIPPDV++   +++ L  L + D A      ++     P   TF  ++ GLC     
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  +   GF P +VTY  LI GLCK G    A  +L+ +      PN + ++T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++R+      I S M  KG + +   Y ++I    K+   K  T  M +MV   +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+ + NT+++  CKEG +  A+ ++D M  +G E +  T+  L+DG C    +  A  
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
             + M      +N+ +YN +++   K   +D A+ +FE M       ++ TY++++H LC
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396

Query: 400 KAKRLPSASKLLLSCLKSG 418
              RL  A  L    +  G
Sbjct: 397 HVGRLQDAISLFHEMVARG 415



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  V +N L+ +  +        ++  +M   GI PDV T   +I      + +  +   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  ++ +L+  L   GK  EA  +F  MI     P   T+  ++NGLCK
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R +++    P +V ++ LI  LCK  ++  A  I  E+   G +PN +T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++    +  ++K    +++ M       D F   TV+ A  K G + EA D ++ M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ ++V+YN L++ +C   +++ A  + D M  +    +  ++  LI+G CK  ++ 
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M++     N   YN ++  L   G++  AI++F  M    ++ D  TY ++ 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK + L  A  LL +   S           ++DG+  +G   +A+ + S +
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 141/292 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V   CK   + +A  ++   I  GV P+VVTYN L+D +C     D    + + M 
Sbjct: 283 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 342

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                 +V++YN+LI G  +   +  ++ L +EM    + P+  +YN+L+H L  +G+  
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F +M+     P   T+  + + LCKNR+ D A+ + + ++   + P++  Y  ++
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+C+AG L  AR +   L   G  PN  TY  ++    +        ++ S M + G +
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            +   Y  +   F++        + +E+M+  G  +D+ +   L+ +   +G
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 41/378 (10%)

Query: 106 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           + +PP   S  +N+           DEA   F  M+     P T  FN +L  + K ++ 
Sbjct: 27  LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 86

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              L + R +   G  P++ T  I+I  LC   R+  A   L ++   GH P+A T+TT+
Sbjct: 87  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 146

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG----------------- 266
           ++      K    L +   M  +G+  +   Y T+I    K+G                 
Sbjct: 147 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 206

Query: 267 ------------------RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                             ++ EA +   +M+T G+  +IV+YN+LI+  CK  + +    
Sbjct: 207 QPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 266

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L++EM       D +T   ++D LCK G +  A   ++ M   G + N+  YN ++D   
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 326

Query: 369 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              ++D A+ VF++M  KD      +Y+++++  CK + +  A  L     +  +     
Sbjct: 327 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 386

Query: 425 AQKAVVDGLRHSGCRREA 442
               ++ GL H G  ++A
Sbjct: 387 TYNTLIHGLCHVGRLQDA 404



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 93/195 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   RL+ A ++  + +  G +PD+VTY  L D  C+    D    +L  +  
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +   PD+  Y +++ G  R   L  + DL   +   G+ P+VW+YN ++H L + G   E
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++F +M     +P   T+N++  G  +N      + +   +   GF  ++ T  +L+ 
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568

Query: 191 GLCKAGRLRTARWIL 205
            L   G  ++ + IL
Sbjct: 569 MLSDDGLDQSVKQIL 583


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 210/436 (48%), Gaps = 42/436 (9%)

Query: 22  RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +L+K + +I  G +   LG+  D+ T+N++I+ +C         +IL +M + G  PD V
Sbjct: 97  KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T  SL+ G  R + +S ++ L+D+M+E+G  PD+ +YN++                    
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-------------------- 196

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                          ++ LCK +  ++A   F+ +++ G  P +VTY  L+ GLC + R 
Sbjct: 197 ---------------IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L ++      PN ITY+ ++    +N K     E+   M R     D   Y ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I       R+ EA    + MV+ G   D+VSYNTLIN +CK  ++E    L  EM ++G 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T+  LI G  +AG++  A+     M+  G   ++  YN ++  L  +G+++ A+ 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +FE M+ +    D  TY++++  +CK  ++  A  L  S    G++        ++ GL 
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 435 HSGCRREAKKIQSKIR 450
             G   E + + +K++
Sbjct: 482 TKGLLHEVEALYTKMK 497



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 170/320 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ NR+  A +++   + +G  PD+V YN +ID+ C+    +  +     +   GI P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +L+ G   +S  S +  LL +M++  I P+V +Y++L+    + GK  EA  +F+
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T++ ++NGLC +   D A +MF  +   G + ++V+YN LI G CKA 
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+        E  S M   G + D + Y 
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G L++A    E M    + LDIV+Y T+I   CK GK+E A+ L   +  +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464

Query: 317 GFECDKYTHTILIDGLCKAG 336
           G + D  T+T ++ GLC  G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 190/375 (50%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC   ++  A +I+   ++LG  PD VT   L++ +C+        +++++M 
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD+V YN++I    +   ++ + D   E+   GI P+V +Y +L++ L    +  
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+  DMI   +TP   T++ +L+   KN     A  +F  + +    P++VTY+ LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC   R+  A  +   +   G   + ++Y T++    + ++ + G+++   M ++G  
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F + G + +A ++  QM   G+  DI +YN L+   C  G+LE A ++
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            ++M+K+  + D  T+T +I G+CK G ++ A      ++  G   ++  Y  ++  L  
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 370 DGKIDHAINVFESME 384
            G +     ++  M+
Sbjct: 483 KGLLHEVEALYTKMK 497



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 160/333 (48%), Gaps = 4/333 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K ++A  +F DM+     P    FN +L+ + K +  D  + + + ++  G   +L T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C   ++  A  IL ++   G+ P+ +T  +++    R  +    + ++  M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  D   Y  +I +  K  R+ +A D+ +++   G++ ++V+Y  L+N  C   +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +M K+    +  T++ L+D   K G +  A+   E M ++  D ++  Y+ +++ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L    +ID A  +F+ M  K    D  +Y+++++  CKAKR+    KL     + G+   
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                 ++ G   +G   +A++  S++    IS
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 40/453 (8%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS--PDV 77
           A R +   A+  + ++LG+ P +VTYN L+D++ +    D    +L  M   G S  P+ 
Sbjct: 209 AARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPND 268

Query: 78  VTYNSLIAGATR-------------------------NSLLSCSL---------DLLDEM 103
           VTYN +IAG  R                         N L++  L         DL  EM
Sbjct: 269 VTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEM 328

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI P V +YN+++H L Q G+ + A   F +M    L P   T+N +LNG CK    
Sbjct: 329 ENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQ 388

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  L++ G  P ++TYNILI G C+ G L  AR + +E+ + G  P+  TYT +
Sbjct: 389 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTIL 448

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           MK         +  E    M  KG   D F Y T I A + +G + ++    E ++ +G+
Sbjct: 449 MKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGI 508

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V+YN LI+  CK G L+ A  L+ +M   G + D  T+T LI   C+ G ++ AR 
Sbjct: 509 SSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARK 568

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
               M   G   +   Y  I+    + G +  A   F  M  +    +  TY+ ++H LC
Sbjct: 569 FFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 628

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  R   A +     L+ G+   K     ++DG
Sbjct: 629 RMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 35/315 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA   ++A  +  D  R G+ P V+TYN+LID YC+    +    +   M E G  PD
Sbjct: 382 YCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 441

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  L+ G+     L+ + +  DEML  G+ PD ++YN+ +     LG   ++ ++ +
Sbjct: 442 VYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLRE 501

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            ++   ++  T T+NI+++GLCK     +A  +   +  +G  P+ +TY  LI   C+ G
Sbjct: 502 VIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERG 561

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            LR AR    ++   G  P+A+TYT I                                 
Sbjct: 562 FLREARKFFNDMISDGLPPSAVTYTVI--------------------------------- 588

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
             I A+ + G L  A  +  +M+ +GV+ + ++YN LI+  C+ G+ + AY    EM ++
Sbjct: 589 --IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLER 646

Query: 317 GFECDKYTHTILIDG 331
           G   +KYT+T+LIDG
Sbjct: 647 GLVPNKYTYTLLIDG 661



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 109/249 (43%), Gaps = 35/249 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-- 68
           NI +  +C+   LE+A  +  + +  G LPDV TY +L+       S        + M  
Sbjct: 411 NILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLS 470

Query: 69  -----------------------------REA----GISPDVVTYNSLIAGATRNSLLSC 95
                                        RE     GIS D VTYN LI G  +   L  
Sbjct: 471 KGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKD 530

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           + +L+ +M+  G+ PD  +Y  L+H   + G   EA + F DMI   L P   T+ ++++
Sbjct: 531 AEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIH 590

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C+     +A   FR + + G  P  +TYN+LI  LC+ GR + A     E+ + G  P
Sbjct: 591 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVP 650

Query: 216 NAITYTTIM 224
           N  TYT ++
Sbjct: 651 NKYTYTLLI 659



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 45/322 (13%)

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
           AT ++  +  L    EM   G+ PDV   N ++  L    + D+ + V  +M+       
Sbjct: 171 ATPDTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEML------- 223

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
                                       + G  P +VTYN L+    K GR      +LK
Sbjct: 224 ----------------------------QLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLK 255

Query: 207 ELGDSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           E+   G +  PN +TY  ++    R + Y      L    R       F Y  +I   + 
Sbjct: 256 EMEARGSSCLPNDVTYNVVIAGLAR-KGYLEEAAELVEEMRLSKKASSFTYNPLITGLLA 314

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G +K+  D   +M  +G+   +V+YN +I+   + G++EAA     EM   G   D  T
Sbjct: 315 RGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVIT 374

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           +  L++G CKAGN K A L    + + G    +  YN ++D   + G ++ A  + E M 
Sbjct: 375 YNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMV 434

Query: 385 ----VKDSFTYSSMV---HNLC 399
               + D +TY+ ++   HN+C
Sbjct: 435 EQGCLPDVYTYTILMKGSHNVC 456



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 42/225 (18%)

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC----- 320
            R  + +    +M+  G++  IV+YNTL++ + KEG+ +   +LL EME +G  C     
Sbjct: 210 ARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDV 269

Query: 321 -------------------------------DKYTHTILIDGLCKAGNIKGA-RLHLEYM 348
                                            +T+  LI GL   G +K    L LE  
Sbjct: 270 TYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEME 329

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           N+ G    +  YN ++  L + G+I+ A   F  M     + D  TY+S+++  CKA   
Sbjct: 330 NE-GIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQ 388

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             A  L     ++G+         ++DG    G   EA++++ ++
Sbjct: 389 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 210/448 (46%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD VTY+ ++ A C+  + D     L +M  
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TYN+LI G +       ++ +  EM    I PDV ++N LM  L + GK  E
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKE 342

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++NIMLNG        +   +F  +   G  P + T+N+LIK
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 402

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  PN +TYTT++    R  K    +E  + M  +G   
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G L +A + + +++ +G+ LDIV ++++IN  CK G++  A  + 
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G       +++L+DG C  G ++ A    + M   G + N   Y  +V+   K 
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  M  K     +  Y+ ++  L +A R   A        +SG+ + K   
Sbjct: 583 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 642

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             V+ GL  + C  EA  +  ++R   +
Sbjct: 643 SIVLRGLFKNRCFDEAIFLFKELRAMNV 670



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 196/425 (46%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  D++  N L+  +C+    D    IL +R  E G 
Sbjct: 121 CT--RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGC 178

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y+ L+           + DLL  M E G    PDV +YN+++   F+ G  ++A
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKA 238

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T++ +++ LCK R  D A    R +   G +P   TYN LI G
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T+  +M    +  K K   ++   M  KG   D
Sbjct: 299 YSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+   I ++N LI  Y   G L+ A ++ +
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G + +  T+T +I  LC+ G +  A      M   G   +  AY+C++      G
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   +SS+++NLCK  R+  A  +    +  G+        
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 428 AVVDG 432
            ++DG
Sbjct: 539 MLMDG 543



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 172/389 (44%), Gaps = 7/389 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD- 98
           P   TY +L+D   +    +       ++   G+  D++  N L+ G         +LD 
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIMLNG 156
           LL    E+G  PDV+SY+ L+  L   GK  +A+ + + M  G    +P    +N +++G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    + A  +F+ + + G  P+ VTY+ ++  LCKA  +  A   L+++ + G  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++       ++K  + +   M+R+    D   +  ++ +  K G++KEA D  +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   D+ SYN ++N Y  +G L     L D M   G      T  +LI      G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A +    M   G   N+  Y  ++  L + GK+D A+  F  M       D + Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            ++   C    L  A +L+   + +G+ +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHL 497



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 171/397 (43%), Gaps = 35/397 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +  +     L+KA  I  +    GV P+V+TY  +I A C+    D      N+M 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456

Query: 70  EAGISPDVVTYNSLIAG-ATRNSLLS---------------------------CSL---- 97
           + G++PD   Y+ LI G  T  SLL                            C L    
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              ++ D  + +G+ P    Y+ LM     +GK ++A RVF  M+   + P    +  ++
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D  L +FR + + G  P  + YNI+I GL +AGR   A+    E+ +SG A
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N  TY+ +++  F+NR +   + +   ++      D     T+IA   +  R++EA D 
Sbjct: 637 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 696

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              +   G+   +V+Y+ +I    KEG +E A  +   M+  G E D      ++  L K
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
              I  A  +L  +++  F         +VD     G
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 184/417 (44%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + T+N+LI AY      D    I N MR+ G+ P+V+TY ++IA   R   +  +
Sbjct: 389 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++  ++M++ G+ PD ++Y+ L+      G   +A  +  +++   +      F+ ++N 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINN 508

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A  +F      G  P  V Y++L+ G C  G++  A  +   +  +G  PN
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y T++    +  +   GL +   M +KG       Y  +I    + GR   A     
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+ ++  +Y+ ++    K    + A  L  E+     + D  T   +I G+ +  
Sbjct: 629 EMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 688

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A+     +++ G    +  Y+ ++  L K+G ++ A ++F SM+      DS   +
Sbjct: 689 RVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 748

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 448
            +V  L K   +  A   L    +    +       +VD     G CR   + + +K
Sbjct: 749 HVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 7/315 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L +  +   CK  R+  A+ I    + +G+ P  V Y+ML+D YC     +    +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M  AGI P+ V Y +L+ G  +   +   L L  EML+ GI P    YN ++  LF+
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+   A   F +M    +     T++I+L GL KNR  D A+ +F+ L+      +++T
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 676

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
            N +I G+ +  R+  A+ +   +  SG  P  +TY+ ++    +    +   ++ S+M+
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK-- 302
             G   D      V+   +K   +  A  Y+ ++      L+ ++   L++L+  +G   
Sbjct: 737 NAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCR 796

Query: 303 -----LEAAYLLLDE 312
                L A Y  L E
Sbjct: 797 EHIRFLPAKYHFLAE 811



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 170/384 (44%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P   +Y  LM C  +  +P+ A   F  ++   L       N +L G C+ + TD AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +Y+IL+K LC  G+   A  +L+ + + G   +P+ + Y T++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV  GV 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +  +YN LI  Y   G+ + A  +  EM +Q    D  T  +L+  LCK G IK AR  
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 345 LEYMNKIGFDSNLEAYN----------CIVD-------RLGKD----------------- 370
            + M   G + ++ +YN          C+VD        LG                   
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406

Query: 371 -GKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK +  TY++++  LC+  ++  A +     +  GV   K A
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEI 490



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 155/332 (46%), Gaps = 3/332 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L KA+ +I + +  G+  D+V ++ +I+  C+         I +     G+ P 
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y+ L+ G      +  +L + D M+  GI P+   Y +L++   ++G+ DE   +F+
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P T  +NI+++GL +   T  A   F  + + G      TY+I+++GL K  
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 653

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A ++ KEL       + IT  T++   F+ R+ +   ++ +++ R G       Y 
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K G ++EA D    M   G + D    N ++    K+ ++  A   L +++++
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            F  +  T  +L+D     G     R H+ ++
Sbjct: 774 NFSLEHLTTMLLVDLFSSKGT---CREHIRFL 802



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L NI +    +A R   A+    +    G+  +  TY++++    +   FD    
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 660

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  D++T N++IAG                                   +F
Sbjct: 661 LFKELRAMNVKIDIITLNTMIAG-----------------------------------MF 685

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  + +EA  +F  +    L PC  T++IM+  L K    + A  MF  +Q  G  P+  
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             N +++ L K   +  A   L ++ +   +   +T
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 205/407 (50%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A +++ D +R G  P+VVTY +L++A C+   F+    +L+ MR  G +P+
Sbjct: 153 LCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPN 212

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  + +LL+ +   G  PD  SY +L+  L    + D+   +F 
Sbjct: 213 IVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFA 272

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TF++++   C+    + A+++   + +HG        NI+I  +CK G
Sbjct: 273 EMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQG 332

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  +L ++G  G  P+ I+YTT++K   R  ++    E+L+ M R     +   + 
Sbjct: 333 RVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFN 392

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G +++A   +EQM   G  + +V+YN L+N +C +G +++A  L   M  +
Sbjct: 393 TFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 452

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T+T L+ GLC A  + GA   +  M +     N+  +N +V    + G ++ A
Sbjct: 453 P---NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEA 509

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + E M       +  TY++++  + K      A +LL   +  GV
Sbjct: 510 IELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGV 556



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 197/401 (49%), Gaps = 4/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++      G   DV  YN L+  YC++   DA   ++  M    ++PD
Sbjct: 86  LCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPD 142

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  LI        ++ +L LLD+ML  G  P+V +Y  L+  + +    ++A  V  
Sbjct: 143 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD 202

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A  +   L  +GF P+ V+Y  L+KGLC + 
Sbjct: 203 EMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASK 262

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R      +  E+ +    PN +T+  +++   R    +  +++L  M   G   +     
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN 322

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI +  K GR+ +A   +  M + G   D +SY T++   C+  + + A  LL+EM + 
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN 382

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I+ A + +E M++ G    +  YN +V+     G ID A
Sbjct: 383 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA 442

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + +F SM  K ++ TY++++  LC A+RL  A++L+   L+
Sbjct: 443 LELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 3/337 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI + + CK  R++ A  ++ D    G  PD ++Y  ++   C+   +D    +L
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M      P+ VT+N+ I    +  L+  ++ L+++M E G    V +YN+L++     
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  D A  +F+ M C    P T T+  +L GLC     D A  +   + +    P +VT+
Sbjct: 437 GHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G L  A  +++++ + G  PN ITY T++    ++   +  LE+L  +  
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVS 553

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG + D   + ++I    K  R++EA      +   G++   V YN ++   CK  +++ 
Sbjct: 554 KGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDN 613

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A      M   G   ++ T+ ILI+GL   G +K A+
Sbjct: 614 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQ 650



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 171/360 (47%), Gaps = 3/360 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+   +E+A  ++      G   +    N++I++ C+    D  + +LN M   G +PD
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            ++Y +++ G  R      + +LL+EM+    PP+  ++N+ +  L Q G  ++A  + +
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M     T    T+N ++NG C   + D+AL +FR +      P  +TY  L+ GLC A 
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAE 469

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  ++ E+      PN +T+  ++    +    +  +E++  M   G T +   Y 
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYN 529

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    K    ++A + +  +V+ GV  D+++++++I +  KE ++E A  L   ++  
Sbjct: 530 TLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDI 589

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G       +  ++ GLCK   I  A     YM   G   N   Y  +++ L  +G +  A
Sbjct: 590 GMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 649



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 3/301 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A R + A+ ++ + +R    P+ VT+N  I   CQ    +    ++ +M E G +  
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G      +  +L+L   M      P+  +Y +L+  L    + D A  +  
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVA 479

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+ GD  P   TFN++++  C+  + + A+ +   + +HG  P L+TYN L+ G+ K  
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +L  L   G +P+ IT+++I+    +  + +  +++   ++  G       Y 
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K   +  A D+   MV++G   +  +Y  LI     EG L+ A  LL  +  +
Sbjct: 600 KILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSR 659

Query: 317 G 317
           G
Sbjct: 660 G 660



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 42/298 (14%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++  LC+   T +A R+ R  +  G   ++  YN L+ G C+ G L  AR +   +G   
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMP 138

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            AP+A TYT +++      +    L +L  M R+G   +   Y  ++ A  +    ++A 
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             +++M   G   +IV+YN +IN  C+EG+++ A  LL+ +   GF+ D  ++T L+ GL
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258

Query: 333 -----------------------------------CKAGNIKGARLHLEYMNKIGFDSNL 357
                                              C+ G ++ A   LE M + G  +N 
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
              N +++ + K G++D A  +   M       D+ +Y++++  LC+A+R   A +LL
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 3/274 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C  C+   +E+A  +I      G    VVTYN L++ +C     D+    L   R
Sbjct: 391 FNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFR 447

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ +TY +L+ G      L  + +L+ EML    PP+V ++N L+    Q G  +
Sbjct: 448 SMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLE 507

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + M+    TP   T+N +L+G+ K+  +++AL +  GL   G  P+++T++ +I
Sbjct: 508 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L K  R+  A  +   + D G  P A+ Y  I+    +  +    ++  + M   G  
Sbjct: 568 GILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCM 627

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y  +I      G LKEA D +  + + GV
Sbjct: 628 PNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 36/167 (21%)

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           DG   D+     LI   C+ G+   A  +L   E  G   D + +  L+ G C+ G++  
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 341 ARL--------------------------------HLEYMNKIGFDSNLEAYNCIVDRLG 368
           AR                                  L+ M + G   N+  Y  +++ + 
Sbjct: 130 ARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++   + A+ V + M  K    +  TY+ +++ +C+  R+  A +LL
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELL 236


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 212/449 (47%), Gaps = 30/449 (6%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M G ++  + N  V +FCK +  ++AE ++      G+LPDVVT+N  I A C+      
Sbjct: 213 MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFE 272

Query: 61  GYTILNRMR---EAGIS-PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
              I   M+   E G+  P+VVT+N ++ G  +  ++  +  L++ M + G    + SYN
Sbjct: 273 ASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYN 332

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           + +  L + GK  E   V  +M+   + P   ++NI+++GLC+N    +A R+   +  +
Sbjct: 333 TWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSN 392

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P+ VTY  L+ G C  G++  A+ IL E+   G  PN  T  T++   ++  +    
Sbjct: 393 GVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEA 452

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ------------ 284
            E+L  M  K Y  D      V+    + G L++A++ + +M TDG              
Sbjct: 453 EEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLV 512

Query: 285 ----------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                      D+++Y TLIN  CK GKLE A     EM  +    D  T+   +   CK
Sbjct: 513 NSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCK 572

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G I  A   L+ M + G    L+ YN ++  LG  G+I     + + M  +    D  T
Sbjct: 573 QGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICT 632

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           Y++M++ LC+  +   A+ LL   L  GV
Sbjct: 633 YNNMINCLCEGGKTKDATSLLHEMLDKGV 661



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 222/470 (47%), Gaps = 30/470 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    +  +L +  +++ + +  G+ P++ +YN+++D  C+         +++ M  
Sbjct: 332 NTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVS 391

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD VTY +L+ G      +  +  +L+EM+  G  P+ ++ N+L++ L++ G+  E
Sbjct: 392 NGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSE 451

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------ 178
           A  + Q M        T T NI++NGLC+N   + A  +   +   G             
Sbjct: 452 AEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGL 511

Query: 179 ----------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
                     VP+++TY  LI GLCK G+L  A+    E+      P+++TY T +    
Sbjct: 512 VNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFC 571

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +  K    L +L  M+R G +     Y ++I      G++ E    M++M   G+  DI 
Sbjct: 572 KQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDIC 631

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGF-ECDKYTHTILIDGLCKAGNIKGA-RLHLE 346
           +YN +IN  C+ GK + A  LL EM  +G    +  +  ILI   CK+G+ K A  L   
Sbjct: 632 TYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDV 691

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE-SME---VKDSFTYSSMVHNLCKAK 402
            ++  G    L  Y+ + + L   GK+  A  +FE S+E   +  +F Y  ++  LCK  
Sbjct: 692 ALSVCGHKEAL--YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDG 749

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           RL  A  LL   +  G     S+   V+DGL   G +++A ++   + +A
Sbjct: 750 RLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELA 799



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 198/409 (48%), Gaps = 19/409 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N+ + + C++N L+ A  +       G  P+  T  +L+  +C+          ++
Sbjct: 151 TYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVD 210

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
              + G + + V YN+L++   +  +   +  L++ M E G+ PDV ++NS +  L + G
Sbjct: 211 --GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAG 268

Query: 127 KPDEANRVFQDM-ICGDL---TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           K  EA+R+F+DM + G+L    P   TFN+ML G C+    + A  +   ++K G    L
Sbjct: 269 KVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSL 328

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +YN  + GL + G+L   R +L E+ ++G  PN  +Y  +M    RN        ++  
Sbjct: 329 ESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDL 388

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M   G   D   Y T++  +   G++ EA   + +M+  G   +  + NTL+N   KEG+
Sbjct: 389 MVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
              A  +L +M ++ ++ D  T  I+++GLC+ G ++ A   +  M   G +S       
Sbjct: 449 KSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNS------- 501

Query: 363 IVDRLGKDGKIDHAINVFE--SMEVKDSFTYSSMVHNLCKAKRLPSASK 409
               LGK+  +   +N     S  V D  TY+++++ LCK  +L  A K
Sbjct: 502 ----LGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKK 546



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 161/335 (48%), Gaps = 10/335 (2%)

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            Q  +P     ++ DMI   + P T TFN+++  LC++   D+A  +F  + + G  P  
Sbjct: 127 LQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNK 186

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            T  IL++G C+AGR + A   +   G  G   N + Y T++    +        +++  
Sbjct: 187 FTVGILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVER 244

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG----VQLDIVSYNTLINLYC 298
           M  KG   D   + + I+A  + G++ EA+     M  DG     + ++V++N ++  +C
Sbjct: 245 MTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFC 304

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           +EG +E A  L++ M+K G      ++   + GL + G +   R  L+ M + G + N+ 
Sbjct: 305 QEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIY 364

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           +YN ++D L ++  +  A  + + M       D+ TY++++H  C   ++  A  +L   
Sbjct: 365 SYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM 424

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++ G          +++ L   G + EA+++  K+
Sbjct: 425 IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKM 459



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 150/362 (41%), Gaps = 61/362 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAII----IDGIR-LGV-----------------LPD 41
           +L T   NI V   C+   LEKA  ++     DG   LG                  +PD
Sbjct: 465 QLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPD 524

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           V+TY  LI+  C+    +        M    + PD VTY++ +    +   +S +L +L 
Sbjct: 525 VITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLK 584

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           +M   G    + +YNSL+  L   G+  E   +  +M    + P   T+N M+N LC+  
Sbjct: 585 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGG 644

Query: 162 YTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            T +A  +   +   G V P + ++ ILIK  CK+G  + A     EL D          
Sbjct: 645 KTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVA----CELFD---------- 690

Query: 221 TTIMKCCFRNRKYKLGL-EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
             +  C  +   Y L   E+L+                        G+L +A +  E  +
Sbjct: 691 VALSVCGHKEALYSLMFNELLAG-----------------------GKLSDAKELFEASL 727

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              +      Y  LI+  CK+G+L+ A+ LL ++  +G+  D  +   +IDGL K GN +
Sbjct: 728 ERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQ 787

Query: 340 GA 341
            A
Sbjct: 788 QA 789


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 221/449 (49%), Gaps = 4/449 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI + +  +  ++ +A  +++     G +PDVV+Y  +ID YC          ++
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+ P++ TY+S+I    ++  +     +L EM++ G+ PD   Y +L+    +L
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G    A ++F +M   ++ P +  F+ ++ GL  +     A ++F  + K GF P+ VTY
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI G CK G ++ A ++  ++   G  PN +TYT +     ++ +     E+L  M R
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG   +   Y T++    K G + +A   ME+M   G+  D ++Y TL++ Y K G++  
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK 408

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LL EM  +G +    T  +L++GLC +G ++     L++M + G   N   YN I+ 
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468

Query: 366 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           +      +  +  ++  M     V DS TY+ ++   CKA+ +  A  L    ++    +
Sbjct: 469 QYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL 528

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             S+  A++ G        EA+++  ++R
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMR 557



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 197/386 (51%), Gaps = 3/386 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK+ ++ + E ++ + ++ GV PD V Y  LID +C+  +  A Y + + M    I
Sbjct: 187 ILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREI 246

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD + +++LI G + +  +  +  L +EM++ G  PD  +Y +L+    +LG+  +A  
Sbjct: 247 VPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFF 306

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   LTP   T+  + +GLCK+   D A  +   + + G    + TYN ++ GLC
Sbjct: 307 LHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLC 366

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG +  A  +++E+ ++G  P+ ITYTT+M   ++  +     E+L  M  +G      
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +  ++      G+L++    ++ M+  G+  +  +YN+++  YC    +  +  +   M
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGM 486

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
             QG   D  T+ ILI G CKA N+K A  LH E + K  F+    +YN ++    K  K
Sbjct: 487 CAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK-RFNLTASSYNALIKGFFKRKK 545

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNL 398
           +  A  +FE M  ++    S+ ++NL
Sbjct: 546 LLEARQLFEEMR-REGLVASAEIYNL 570



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 167/327 (51%), Gaps = 2/327 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C    + ++ +A+ +  + I+ G  PD VTY  LID YC+       + + N+M + G+
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P+VVTY +L  G  ++  L  + +LL EM   G+  ++ +YN++++ L + G   +A +
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M    L P T T+  +++   K      A  + R +   G  P +VT+N+L+ GLC
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDG 252
            +G+L     +LK + + G  PNA TY +IMK  C RN   ++  EI   M  +G   D 
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN-NMRISTEIYRGMCAQGVVPDS 495

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I    K   +KEA    ++MV     L   SYN LI  + K  KL  A  L +E
Sbjct: 496 NTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEE 555

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIK 339
           M ++G       + + +D   + GN++
Sbjct: 556 MRREGLVASAEIYNLFVDMNYEEGNME 582



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 187/369 (50%), Gaps = 4/369 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           +LGV  +  +YN+L+++  +       + +L RM   G  PDVV+Y ++I G      L 
Sbjct: 103 QLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQ 162

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
             + L+ EM   G+ P++++Y+S++  L + GK  E  +V ++M+   + P    +  ++
Sbjct: 163 KVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G CK   T  A ++F  ++    VP+ + ++ LI GL  +G++  A  +  E+   G  
Sbjct: 223 DGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE 282

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +TYT ++    +  + K    + + M + G T +   Y  +     K G L  A + 
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL 342

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M   G+QL+I +YNT++N  CK G +  A  L++EM++ G   D  T+T L+D   K
Sbjct: 343 LHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYK 402

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G +  AR  L  M   G    +  +N +++ L   GK++    + + M  K    ++ T
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462

Query: 391 YSSMVHNLC 399
           Y+S++   C
Sbjct: 463 YNSIMKQYC 471



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 149/296 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   ++KA  +    +++G+ P+VVTY  L D  C+    D    +L+ M   G+  +
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN+++ G  +   +  ++ L++EM E G+ PD  +Y +LM   ++ G+  +A  + +
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L P   TFN+++NGLC +   ++  R+ + + + G +P   TYN ++K  C   
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN 474

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +R +  I + +   G  P++ TY  ++K   + R  K    +   M  K +      Y 
Sbjct: 475 NMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYN 534

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
            +I  F K  +L EA    E+M  +G+      YN  +++  +EG +E    L DE
Sbjct: 535 ALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 175/387 (45%), Gaps = 38/387 (9%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           ++ G  P V  ++          LL+ +    D++L  G+     S N  + CL    K 
Sbjct: 33  KDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSS--KR 88

Query: 129 DEAN---RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           D      +VF +     +   T ++NI++N L +      A  +   ++  G +P++V+Y
Sbjct: 89  DMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSY 148

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             +I G C  G L+    ++KE+   G  PN  TY++I+    ++ K   G ++L  M +
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D   Y T+I  F K+G  + A     +M    +  D ++++ LI      GK+  
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L +EM K+GFE D+ T+T LIDG CK G +K A      M +IG   N+        
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNV-------- 320

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
                                   TY+++   LCK+  L +A++LL    + G+++  S 
Sbjct: 321 -----------------------VTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMA 452
              +V+GL  +G   +A K+  +++ A
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEA 384



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 109/236 (46%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+    N  V   CKA  + +A  ++ +    G+ PD +TY  L+DAY +         
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M + G+ P VVT+N L+ G   +  L     LL  MLE GI P+  +YNS+M    
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                  +  +++ M    + P + T+NI++ G CK R    A  + + + +  F     
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           +YN LIKG  K  +L  AR + +E+   G   +A  Y   +   +     +  LE+
Sbjct: 532 SYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 215/440 (48%), Gaps = 7/440 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  + ++AE +  +    G+  + VTY++LID++C+    D     L +M  
Sbjct: 370 NALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIM 429

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AGI   V  YNSLI G  +   LS ++   DEM++ G+ P V SY SL+      GK  E
Sbjct: 430 AGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHE 489

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A R++ +M    + P T TF  +++ L + NR TD A R+F  + +   +P  VTYN++I
Sbjct: 490 AFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD-AFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G CK G    A  +L ++   G  P+  TY  ++       +     + +  + R+ + 
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++  + K GRL++A     +MV  GV +D+V Y  LI+   KE    A + L
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGL 668

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M  Q    DK  +T +IDG  KAG++K A    + M   G   N+  Y  +++ L K
Sbjct: 669 LKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCK 728

Query: 370 DGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A  +++ M V +S     TY   + +L +   +  A +L    LK G+     +
Sbjct: 729 AGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVS 787

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              +V G    G   EA K+
Sbjct: 788 YNILVRGFCKLGRVEEATKL 807



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 211/442 (47%), Gaps = 4/442 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + N+ +   CK  R+ +A  I    I+ G+    VTY  L+   C+   F+ G  +
Sbjct: 259 LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGV 318

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++ M E G  P     +SL+ G  R   +  + DL++ + ++G  P ++ YN+L++ L +
Sbjct: 319 MDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK 378

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK DEA  +F++M    L     T++I+++  C+    D A+     +   G    +  
Sbjct: 379 DGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP 438

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI G CK G L  A     E+ D G  P  ++YT+++       K      +   M 
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   + + + T+I+A  +  R+ +A    ++M+   +  + V+YN +I  +CKEG   
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LL++M ++G   D YT+  LI  LC  G +  A+  ++ +++  F  N   Y+ ++
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
               K+G++  A+ V   M  +    D   Y+ ++    K +   +   LL +     +R
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678

Query: 421 ILKSAQKAVVDGLRHSGCRREA 442
             K    +++DG   +G  ++A
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKA 700



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 209/454 (46%), Gaps = 50/454 (11%)

Query: 11  NICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +I + +FC+  +L+ A      +I+ GI++ V P    YN LI+ +C+  +  A  +  +
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP----YNSLINGHCKLGNLSAAVSFFD 460

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + G+ P VV+Y SLI+G      L  +  L  EM   GI P+ +++ +L+  LF+  
Sbjct: 461 EMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRAN 520

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A R+F +M+  ++ P   T+N+M+ G CK   T  A  +   + + G VP+  TY 
Sbjct: 521 RMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYR 580

Query: 187 ILIK-----------------------------------GLCKAGRLRTARWILKELGDS 211
            LI                                    G CK GRLR A  + +E+   
Sbjct: 581 PLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKR 640

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G   + + Y  ++    + +       +L  M  +    D   Y ++I  + K G +K+A
Sbjct: 641 GVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKA 700

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
               + M+ +G   +IV+Y TLIN  CK G ++ A LL  EM       +  T+   +D 
Sbjct: 701 FGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH 760

Query: 332 LCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVK 386
           L + G++ K  +LH + +   G  +N  +YN +V    K G+++ A  + + M       
Sbjct: 761 LAREGSMEKAVQLHNDMLK--GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFP 818

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D  TYS++++  C+   L  A +   + L  G++
Sbjct: 819 DCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLK 852



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 6/428 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R++    +  + + +G+ PD+  Y  +I ++C+  +F     ++ RM  + +  +VV
Sbjct: 205 KIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVV 262

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN LI G  +N  +  ++++ + +++ G+     +Y +L+  L ++ + +    V  +M
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I     P  A  + ++ GL +     +A  +   ++K G +P L  YN LI  LCK G+ 
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  + KE+G+ G   N +TY+ ++    R  K    +  L  M   G     + Y ++
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K+G L  A  + ++M+  G++  +VSY +LI+ YC +GKL  A+ L  EM  +G 
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             + YT T LI  L +A  +  A    + M +     N   YN +++   K+G    A  
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +   M     V D++TY  ++ +LC   R+  A K +    +   ++ +    A++ G  
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622

Query: 435 HSGCRREA 442
             G  R+A
Sbjct: 623 KEGRLRDA 630



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 185/392 (47%), Gaps = 6/392 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +++LI +Y Q         I   MR+  + P V T   ++ G  +   +   L L  E+L
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
            MGI PD++ Y +++    +L    +A  + Q M   DL      +N++++GLCKN+   
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVYNVLIHGLCKNKRVW 278

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +  GL + G     VTY  L+ GLCK         ++ E+ + G  P     ++++
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           +   R  K     ++++ +K+ G     F Y  +I +  K G+  EA    ++M   G+ 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            + V+Y+ LI+ +C+ GKL+ A   L +M   G +   Y +  LI+G CK GN+  A   
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            + M   G    + +Y  ++      GK+  A  ++  M  K    +++T+++++  L +
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           A R+  A +L    L+  +   +     +++G
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 38/323 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  RL  A  +  + ++ GV  D+V Y +LID   +     A + +L  M +  + PD
Sbjct: 621 YCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPD 680

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y S+I G ++   +  +  + D M++ G  P++ +Y +L++ L + G  D+A  +++
Sbjct: 681 KVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWK 740

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  + TP   T+   L+ L +    + A+++   + K G +   V+YNIL++G CK G
Sbjct: 741 EMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLG 799

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           R+  A  +L E+ D+   P+ ITY+TI+ +CC R                          
Sbjct: 800 RVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRR-------------------------- 833

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
                     G L  A ++ + M+  G++ D ++YN LI   C  G+L  A+ L D+M +
Sbjct: 834 ----------GNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883

Query: 316 QGFECDKYTHTILIDGLCKAGNI 338
           +G + ++ TH  L  G  +  +I
Sbjct: 884 RGVKPNQATHKSLSHGASRKFSI 906



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 17/375 (4%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T      +    +ANR+  A  +  + +   ++P+ VTYN++I+ +C+  +    + +L
Sbjct: 505 NTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELL 564

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N+M + G+ PD  TY  LI+       +  +   +D++       +   Y++L+H   + 
Sbjct: 565 NQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKE 624

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  +A  V ++M+   +      + ++++G  K + T     + + +      P+ V Y
Sbjct: 625 GRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL----EIL- 240
             +I G  KAG ++ A  I   + D G  PN +TYTT++     N   K GL    E+L 
Sbjct: 685 TSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI-----NELCKAGLMDKAELLW 739

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M     T +   YC  +    + G +++A      M+  G+  + VSYN L+  +CK 
Sbjct: 740 KEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKL 798

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G++E A  LLDEM       D  T++ +I   C+ GN+ GA    + M   G   +  AY
Sbjct: 799 GRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAY 858

Query: 361 N------CIVDRLGK 369
           N      CI   LGK
Sbjct: 859 NFLIYGCCIAGELGK 873



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 123/272 (45%), Gaps = 11/272 (4%)

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
            +K  F+  L  +++LI+   +  R+  +  I + +      P   T   ++    + R+
Sbjct: 150 FEKCDFISSL-GFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRR 208

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
             + L +   +   G   D + Y  VI +F ++    +A + +++M  +   L++V YN 
Sbjct: 209 VDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNV 266

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           LI+  CK  ++  A  + + + ++G    + T+  L+ GLCK    +     ++ M ++G
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
           F     A + +V+ L + GK+  A ++   ++    +   F Y++++++LCK  +   A 
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            L     + G+     A       L  S CRR
Sbjct: 387 LLFKEMGEKGL----CANDVTYSILIDSFCRR 414



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V  FCK  R+E+A  ++ + I   + PD +TY+ +I   C+  + D      + M  
Sbjct: 789 NILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLN 848

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            G+ PD + YN LI G      L  + +L D+M+  G+ P+  ++ SL H
Sbjct: 849 KGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSH 898



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 11/163 (6%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +   +EKA  +  D ++ G+L + V+YN+L+  +C+    +    +L+ M +  I PD +
Sbjct: 763 REGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCI 821

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+++I    R   L  +++  D ML  G+ PD  +YN L++     G+  +A  +  DM
Sbjct: 822 TYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM 881

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           I   + P  AT   + +G         A R F  +  H  +PE
Sbjct: 882 IRRGVKPNQATHKSLSHG---------ASRKF-SISTHPVMPE 914



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  ++KAE +  + +     P+ VTY   +D   +  S +    + N M + G+  +
Sbjct: 726 LCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLAN 784

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V+YN L+ G  +   +  +  LLDEM++  I PD  +Y+++++   + G  D A   + 
Sbjct: 785 TVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWD 844

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L P T  +N ++ G C       A  +   + + G  P   T+  L  G  +  
Sbjct: 845 TMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKF 904

Query: 197 RLRT 200
            + T
Sbjct: 905 SIST 908



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 30/293 (10%)

Query: 166 ALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           ALR F  L  H  F    +++ ILI  L  A     A  +L+ L   G       +  ++
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 225 KCCFRNRKY--KLGLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            C F    +   LG ++L  +  ++   FD           V I RL    + M Q+ T 
Sbjct: 148 DC-FEKCDFISSLGFDLLIQSYVQEKRMFDS----------VLIFRLMRQCELMPQVRTL 196

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G          ++N   K  +++   +L  E+   G   D Y +  +I   C+  N   A
Sbjct: 197 G---------EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA 247

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
           +  ++ M     D N+  YN ++  L K+ ++  A+ +   +  K       TY ++V  
Sbjct: 248 KEMIQRME--SSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLG 305

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           LCK +     + ++   ++ G    ++A  ++V+GLR  G   +A  + ++++
Sbjct: 306 LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVK 358


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 213/416 (51%), Gaps = 17/416 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C++N+LEKA  ++     +G +PD   YN LI  Y +   F   +  L  M +    P 
Sbjct: 52  LCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPT 111

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +++ G  +      ++ LLDEM + G  P++++YN ++  L +  K DEA ++ +
Sbjct: 112 VVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLE 171

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+N  + GLCK    D A R F  L +    P++V+Y  +I GLCK+G
Sbjct: 172 EMAVRGYFPDVVTYNSFIKGLCKCDRVDEA-RKF--LARMPVTPDVVSYTTVINGLCKSG 228

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L +A  +L  + + G  P+ +TY++++    +  + +  + +L +M + G   +   Y 
Sbjct: 229 DLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 288

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +++ A  ++G + +A D + +M   G   D+VSYN  I+  CK  +++ A  + D M ++
Sbjct: 289 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 348

Query: 317 G----------FECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVD 365
           G             D   +T+L+DGLCK G    A  L  + +++   + ++  YN ++D
Sbjct: 349 GCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408

Query: 366 RLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              K  +ID A+ + + M  K+     T++ +VH LC   RL  A  +LL+ +  G
Sbjct: 409 SHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 464



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 206/407 (50%), Gaps = 18/407 (4%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           + +R +KA A+  + I     PD  T+ +L+   C+    +    +L RM+E G  PD  
Sbjct: 19  REHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDA 78

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN+LI+G ++      +   L EM++    P V +Y +++  L +  +  +A ++  +M
Sbjct: 79  IYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEM 138

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                +P   T+N+++ GLC+ R  D A +M   +   G+ P++VTYN  IKGLCK  R+
Sbjct: 139 RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRV 198

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             AR  L  +  +   P+ ++YTT++    ++        +L  M  +G T D   Y ++
Sbjct: 199 DEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL 255

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I  F K G ++ A   ++ M+  G + ++V+YN+L+    + G +  A  +L EME++GF
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV----------DRLG 368
             D  ++   IDGLCKA  +K A+   + M + G   N  +Y+ ++          D L 
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375

Query: 369 KDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
           K G+ D A  +F     E +   D F Y+ M+ + CK +++  A ++
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 422



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 217/457 (47%), Gaps = 21/457 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  + KA    +A   + + ++   LP VVTY  ++D  C+         +L+ M
Sbjct: 79  IYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEM 138

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           R+ G SP++ TYN ++ G      L  +  +L+EM   G  PDV +YNS +  L +  + 
Sbjct: 139 RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRV 198

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA +    M    +TP   ++  ++NGLCK+   D+A RM   +   G  P++VTY+ L
Sbjct: 199 DEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL 255

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK G +  A  +L  +   G  PN + Y +++    R        ++L  M+R+G+
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ----------LDIVSYNTLINLYC 298
           T D   Y   I    K  R+K+A    ++MV  G            +DI+ Y  L++  C
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375

Query: 299 KEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           K G+ + A  L  + ++++  E D + + +++D  CK   I K  ++H + + K     N
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC--CN 433

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           +  +N +V  L  D ++  A  +  +M     + D  TY ++V  +CK  +  +A +L  
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             +K G         A++ GL H     EA  + +K+
Sbjct: 494 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 192/397 (48%), Gaps = 17/397 (4%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G   +V TYN L+   TR      +  +  EM++    PD +++  L+  L +  + ++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++   M      P  A +N +++G  K +    A +    + K+  +P +VTY  ++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LCKA R R A  +L E+ D G +PN  TY  I++     RK     ++L  M  +GY  D
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y + I    K  R+ EA  ++ +M    V  D+VSY T+IN  CK G L++A  +LD
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M  +G   D  T++ LIDG CK G ++ A   L+ M K+G   N+ AYN ++  L + G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            I  A ++   ME      D  +Y++ +  LCKA+R+  A  +    ++ G     S+  
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 428 AVV----------DGLRHSGCRREAKKIQSKIRMAKI 454
            ++          DGL   G   EA  + SK+   KI
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 395



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 48/357 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +R+++A   +    R+ V PDVV+Y  +I+  C+    D+   +L+ M   G +PD
Sbjct: 192 LCKCDRVDEARKFLA---RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPD 248

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+SLI G  +   +  ++ LLD ML++G  P++ +YNSL+  L +LG   +A  +  
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 308

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP----------ELVTYN 186
           +M     TP   ++N  ++GLCK      A  +F  + + G  P          +++ Y 
Sbjct: 309 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYT 368

Query: 187 ILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI------ 239
           +L+ GLCK GR   A  +  K L +    P+   Y  ++    + R+    L+I      
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428

Query: 240 ----------------------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
                                       L  M  +G+  D   Y T++ A  K G+   A
Sbjct: 429 KNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +  E+ V  G   D+V+Y+ LI     E   E AYLL  ++ ++ +  D  T  +L
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 12/220 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI----------DAYCQFVSFDA 60
           N C+   CKA R++KA+A+    +  G  P+  +Y+MLI          D  C+   FD 
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382

Query: 61  GYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
              + +++ +  I  PDV  YN ++    +   +  +L +  +MLE     +V ++N L+
Sbjct: 383 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILV 441

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           H L    +  +A  +   M+     P   T+  +++ +CK   +  AL +F    K G V
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 501

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           P++VTY+ LI GL        A  +  +L +    P+  T
Sbjct: 502 PDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK  R ++A A+    +   +  PDV  YN+++D++C+    D    I  +M E     
Sbjct: 374 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC- 432

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVT+N L+ G   +  LS +  +L  M++ G  PD  +Y +L+  + + GK   A  +F
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++ + G   P   T++ ++ GL      + A  +F  L +  +VP+  T  +L + L   
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLL 552

Query: 196 GRLRTARWI 204
            + R A  +
Sbjct: 553 NKPRKAEVV 561



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 60/124 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   C  +RL  AE +++  +  G +PD VTY  L+DA C+     A   +     +
Sbjct: 438 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 497

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVTY++LI G    ++   +  L  +++E    PD  +   L   L  L KP +
Sbjct: 498 GGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRK 557

Query: 131 ANRV 134
           A  V
Sbjct: 558 AEVV 561


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 222/468 (47%), Gaps = 39/468 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+   LNI V   CK  + +  ++ + +    G+  D+VTYN LI AYC+    +  + 
Sbjct: 115 ELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFE 174

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I+N M + G+ P + TYN++I G  +    + +  +L EML +G+ PD  +YN+L+    
Sbjct: 175 IMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESC 234

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP--- 180
           +     EA  +F +M+   + P   +F+ ++    +NR+ D AL  FR ++K G VP   
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV 294

Query: 181 --------------------------------ELVTYNILIKGLCKAGRLRTARWILKEL 208
                                           +++ YN ++ GLCK   L  A  +  E+
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            + G  P+  T+TT++    ++      L +   M ++    D   Y T+I  F K+G +
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A++  + M++  +  + ++Y  LIN YC  G +  A+ L D M ++G +    T   +
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 474

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           I G C++G+   A   L  M   G   +  +YN +++   ++  +D A      ME    
Sbjct: 475 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGL 534

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + D  TY+ +++  C+  R+  A  +L   ++ G+   +S   A+++G
Sbjct: 535 LPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 186/377 (49%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C+ +   +A+ I  + +R GV+PD+V+++ LI  + +    D       
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M++ G+ PD V Y  L+ G  RN  +  +L + DEMLE G   DV +YN++++ L +  
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A+++F +M+     P   TF  +++G C++     AL +F  + +    P++V YN
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 402

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK G +  A  +   +      PN ITY  ++              +   M  K
Sbjct: 403 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK 462

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G         TVI  + + G   +A +++ +M+  GV  D +SYNTLIN + +E  ++ A
Sbjct: 463 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKA 522

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +L +++MEK+G   D  T+ ++++G C+ G ++ A L L  M + G + +   Y  +++ 
Sbjct: 523 FLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582

Query: 367 LGKDGKIDHAINVFESM 383
                 ++ A    + M
Sbjct: 583 HVTQDNLNEAFRFHDEM 599



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 174/341 (51%), Gaps = 2/341 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  F +   L++A     D  + G++PD V Y +L+  YC+  +      I + M E G 
Sbjct: 265 IAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGC 324

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             DV+ YN+++ G  +  +L+ +  L DEM+E G  PD +++ +L+H   Q G   +A  
Sbjct: 325 VLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALS 384

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  M   ++ P    +N +++G CK    + A  ++ G+      P  +TY ILI   C
Sbjct: 385 LFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYC 444

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G +  A  +   + + G  P  +T  T++K   R+       E L  M  KG   D  
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  FV+   + +A  ++ +M  +G+  DI++YN ++N +C++G+++ A L+L +M
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
            ++G   D+ T+T LI+G     N+  A R H E + + GF
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR-GF 604



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 210/493 (42%), Gaps = 57/493 (11%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDV------------------VTYNMLIDAYCQF 55
           V  F ++ RL  A+A+I+  IR   +  V                  + +++LI  Y Q 
Sbjct: 2   VHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQA 61

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
                G      +R  G    +   NSL+ G  +   +  + ++  E++  GI  +V++ 
Sbjct: 62  RKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTL 121

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N +++ L + GK D+      +M    +     T+N ++   C+    + A  +   +  
Sbjct: 122 NIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMAD 181

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G  P L TYN +I GLCK GR   A+ IL E+ + G +P+  TY T++    R   +  
Sbjct: 182 KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE 241

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-------------------- 275
             EI   M R+G   D   + ++IA F +   L +A  Y                     
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301

Query: 276 ---------------EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                          ++M+  G  LD+++YNT++N  CKE  L  A  L DEM ++G   
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 361

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D YT T LI G C+ GN+  A      M +     ++ AYN ++D   K G+++ A  ++
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421

Query: 381 ESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           + M  +  F    TY  +++  C    +  A +L    ++ G++        V+ G   S
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 481

Query: 437 GCRREAKKIQSKI 449
           G   +A +   ++
Sbjct: 482 GDSSKADEFLGRM 494



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 200/421 (47%), Gaps = 4/421 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
             K + +E A  +  + +R G+  +V T N++++A C+   FD   + L+ M   GI  D
Sbjct: 93  LVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYAD 152

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN+LI    R  LL  + ++++ M + G+ P +++YN++++ L + G+   A  +  
Sbjct: 153 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 212

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L+P T T+N +L   C+      A  +F  + + G VP+LV+++ LI    +  
Sbjct: 213 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR 272

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A    +++   G  P+ + YT +M    RN      L+I   M  +G   D   Y 
Sbjct: 273 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    K   L +A    ++MV  G   D  ++ TLI+ +C++G +  A  L   M ++
Sbjct: 333 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + D   +  LIDG CK G ++ A    + M       N   Y  +++     G +  A
Sbjct: 393 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 452

Query: 377 INVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +++ M    +K +  T ++++   C++     A + L   +  GV     +   +++G
Sbjct: 453 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLING 512

Query: 433 L 433
            
Sbjct: 513 F 513



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 153/305 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+   + +A  I  + +  G + DV+ YN +++  C+         + + M E G  PD
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T+ +LI G  ++  ++ +L L   M +  I PD+ +YN+L+    ++G+ ++A+ ++ 
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWD 422

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   + P   T+ I++N  C   +   A R++  + + G  P LVT N +IKG C++G
Sbjct: 423 GMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSG 482

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A   L  +   G AP+ I+Y T++    R          ++ M+++G   D   Y 
Sbjct: 483 DSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYN 542

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            V+  F + GR++EA   + +M+  G+  D  +Y  LIN +  +  L  A+   DEM ++
Sbjct: 543 VVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602

Query: 317 GFECD 321
           GF  D
Sbjct: 603 GFAPD 607



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 7/225 (3%)

Query: 1   MFGKLSTRLL-------NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FG ++ R +       N  +  FCK   +EKA  +    I   + P+ +TY +LI+AYC
Sbjct: 385 LFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYC 444

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                   + + + M E GI P +VT N++I G  R+   S + + L  M+  G+ PD  
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SYN+L++   +    D+A      M    L P   T+N+++NG C+      A  + R +
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
            + G  P+  TY  LI G      L  A     E+   G AP+ +
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 202/416 (48%), Gaps = 4/416 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V +  L+    +   FD   ++  +M+  GISP + T N ++    R+S    +  
Sbjct: 79  LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASC 138

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +M+++G  PD+ ++ SL+H      + ++A  +F  ++     P   T+  +++ LC
Sbjct: 139 FLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC 198

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           KNR+ ++A+ +F  +  +G  P +VTYN L+ GLC+ GR   A W+L+++   G  PN I
Sbjct: 199 KNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+T ++    +  K     E+   M +     D F Y  +I      GRL EA      M
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
            ++G   + V+Y TLI+ +CK  ++E    +  EM ++G   +  T+T+LI G C  G  
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 394
             A+     M       ++  YN ++D L  +G ++ A+ +F+ M  ++      TY+ +
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  +CK  ++  A  L  S    G++        ++ G    G   EA  +  K++
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 197/379 (51%), Gaps = 1/379 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C++++  +A   +   ++LG  PD+VT+  L+  +C +   +    + +++  
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVTY +LI    +N  L+ ++++ ++M + GI P+V +YNSL+  L ++G+  +
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + +DM+   + P   TF  +++   K      A  +++ + +    P++ TY  LI 
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALIN 300

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GRL  AR +   +  +G+ PN +TYTT++    ++++ + G +I   M +KG   
Sbjct: 301 GLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVA 360

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I  +  +GR   A +   QM +     DI +YN L++  C  G +E A ++ 
Sbjct: 361 NTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIF 420

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M K+  + +  T+TI+I G+CK G ++ A      +   G   N+  Y  ++    + 
Sbjct: 421 KYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 480

Query: 371 GKIDHAINVFESMEVKDSF 389
           G I  A  +F+ M+ +D F
Sbjct: 481 GFIHEADALFKKMK-EDGF 498



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 174/341 (51%), Gaps = 2/341 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  NR+E A A+    + +G  P+VVTY  LI   C+    +    I N+M + GI P+
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPN 221

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSL++G       S +  LL +M++ GI P+V ++ +L+    ++GK  EA  +++
Sbjct: 222 VVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   + P   T+  ++NGLC     D A +MF  ++ +G+ P  VTY  LI G CK+ 
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSK 341

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           R+     I  E+   G   N ITYT +++  C   R   +  E+ + M  +    D   Y
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP-DVAQEVFNQMGSRRAPPDIRTY 400

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++      G +++A    + M    + ++IV+Y  +I   CK GK+E A+ L   +  
Sbjct: 401 NVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFS 460

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +G + +  T+T +I G C+ G I  A    + M + GF  N
Sbjct: 461 KGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 156/336 (46%), Gaps = 4/336 (1%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y  ++     N   + +LDL   M+     P +  +  L+  + ++ + D    +F+ M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              ++P   T NI++N +C++     A      + K GF P+LVT+  L+ G C   R+ 
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  +  ++   G  PN +TYTT++ C  +NR     +EI + M   G   +   Y +++
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           +   +IGR  +A   +  M+  G+Q +++++  LI+ + K GK+  A  L   M +    
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D +T+T LI+GLC  G +  AR     M   G+  N   Y  ++    K  +++    +
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 380 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           F  M     V ++ TY+ ++   C   R   A ++ 
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 10/406 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  L+    I+ + +  G +PD   Y +LID  C+    D  Y +  RMR++G   D
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VT+ +LI   + +  L  + +L  EM+E G  P +   +SL+  L + GK DEAN ++Q
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            ++   +      +N +++G CK    D+ L++   + +    P++ TYNIL+ G  +A 
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  + K L   G  PNA TYTTI++  +  ++ +                D   Y 
Sbjct: 314 RLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYT 367

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           TVI       R+ EA +  E++ T G   ++V+Y  +I+   K G++E      ++M   
Sbjct: 368 TVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS 427

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                + T+T++IDGLCKA  +  A    E M + G   +   Y  ++D   K  K+D A
Sbjct: 428 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA 487

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             + + M  K     + TY S+VH  CK   +  A +++    + G
Sbjct: 488 RKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 192/405 (47%), Gaps = 5/405 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+VV Y  +ID   +    + G      M  +   P   TY  +I G  +  +L  +
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             + ++M++ G  PD  +Y +L+    +  K DEA ++   M+     P   T+  +++G
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + A  +   +++ G  P L  +  L+      GR   A  +L E+   G AP+
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 572

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            I YT+++   F   +      +  +M  KG   D   Y T+I  F KIG ++ A + +E
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 632

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  D  +YN+L++ Y K  +++ A+ + D M   G + +  T  +L+ GL K G
Sbjct: 633 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 692

Query: 337 NIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
               A  L  E + K      L +Y  ++D LGK G++  A + F+ M     + +  TY
Sbjct: 693 KTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTY 752

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           +S++++L KA R+P A KL+   +K GV     A  A++ GL  S
Sbjct: 753 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 797



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 10/423 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA ++++A  I    +   V    V YN L+D YC+    D G  +L +M E   
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN 295

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD+ TYN L+AG +R + L  +L+L   +   G  P+  +Y +++  L+   + +EA  
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F + +  D+     ++  ++ GL  ++  D A  +F  L+  G  P +V Y  +I GL 
Sbjct: 356 FFDEAL--DVI----SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAGR+       +++  S   P   TYT ++    + +      ++   M +KG   D  
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  F K  ++ EA   ++ M+T G +   V+Y ++++ +CK   +  A  ++ +M
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G E   +  T L+      G  + A   L  M   G   ++  Y  ++D L   G++
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A +VF+SM  K    D+ TY +++ N  K   + +A ++L    KSGV     A  ++
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 649

Query: 430 VDG 432
           +DG
Sbjct: 650 MDG 652



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 206/468 (44%), Gaps = 34/468 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA +++KA  + ++   +G  P +V+YN +I         D  Y   N M +
Sbjct: 24  NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID 83

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDV+ + +LI G  +         LL++ L+    PDV+ Y S++H   + G  D 
Sbjct: 84  NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDT 142

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++ ++M+     P  A + ++++ LCK    D A  +F  ++K G + + VT+  LI+
Sbjct: 143 GFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIE 202

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L   G+L  A  + +E+ + G+ P      +++    +  K     EI   +  K    
Sbjct: 203 ALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVAT 262

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +++  + K+GR+ +    + QMV      DI +YN L+  + +  +L+ A  L 
Sbjct: 263 SRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELF 322

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH-------------------------- 344
             +   G + +  T+T +I GL  A  ++ A+                            
Sbjct: 323 KLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEA 382

Query: 345 ---LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
               E +   G   N+ AY  ++D L K G+I+  +  FE M     V    TY+ ++  
Sbjct: 383 CELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDG 442

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           LCKA+ LP A K+    ++ G          ++DG   +    EA+K+
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 195/433 (45%), Gaps = 42/433 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +   CKA  L  A  +    ++ G +PD +TY  LID + +    D    +L+ M  
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P  VTY S++ G  +  +++ + +++ +M E G  P ++ + SL+      G+ +E
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +V  +M                                      G  P+++ Y  LI 
Sbjct: 557 AYQVLTEMTA-----------------------------------RGCAPDVILYTSLID 581

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L   GR+  AR +   + + G AP+A+TY TI++   +    +   EIL  M + G   
Sbjct: 582 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 641

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y +++  +VK+ R+ +A    ++MV  G++ + V++N L++   K+GK + A+ L 
Sbjct: 642 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 701

Query: 311 DEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            EM EK        ++TILIDGL KAG +  A    + M   G       Y  ++  L K
Sbjct: 702 KEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761

Query: 370 DGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
            G+I  A  + E M VK     D   YS+++  L  +  + +A  +    +K G    + 
Sbjct: 762 AGRIPEAKKLVEDM-VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 820

Query: 425 AQKAVVDGLRHSG 437
             K +  G R +G
Sbjct: 821 TYKVLRRGFRAAG 833



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 195/438 (44%), Gaps = 11/438 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA + +    ++   ++    PDV  Y  +I  YC+    D G+ IL  M  AG  PD
Sbjct: 100 FCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPD 158

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y  LI    +   +  + +L + M + G   D  ++ +L+  L   GK DEA  +++
Sbjct: 159 AAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYR 218

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI     P     + ++  LCK    D A  +++ +         V YN L+ G CK G
Sbjct: 219 EMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLG 278

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     +L ++ +  + P+  TY  ++    R  +    LE+   +   G   +   Y 
Sbjct: 279 RVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYT 338

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I       R++EA  + ++       LD++SY T+I       +++ A  L ++++  
Sbjct: 339 TIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTA 392

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +   +T +IDGL KAG I+    + E M+          Y  ++D L K   +  A
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             VFE M     V D+ TY++++    KA ++  A KLL   L  G         ++V G
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512

Query: 433 LRHSGCRREAKKIQSKIR 450
                   EAK++ +++R
Sbjct: 513 FCKLDMINEAKEVIAQMR 530



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 190/405 (46%), Gaps = 11/405 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++PDVV  N++++  C+    D    +   M   G  P +V+YN++I+G      +  +
Sbjct: 15  GLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA 74

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               + M++ G  PDV ++ +L+H   + G+P +   +  +       P    +  +++G
Sbjct: 75  YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQP-QVGHMLLNQALKRFRPDVFLYTSVIHG 133

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    D   ++   +   G +P+   Y +LI  LCK GR+  A  + + +  SG   +
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+ T+++    + K     E+   M  +GY        ++I A  K G++ EA +  +
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY----THTILIDGL 332
            +V   V    V+YN+L++ YCK G+++    LL +M     ECD +    T+ IL+ G 
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM----VECDNFPDIQTYNILVAGF 309

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 392
            +A  +  A    + ++  G   N   Y  I+  L    +++ A   F+  E  D  +Y+
Sbjct: 310 SRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD--EALDVISYT 367

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +++  L  +KR+  A +L      +G      A  AV+DGL  +G
Sbjct: 368 TVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 5/352 (1%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +LD L EM   G+ PDV + N +++ L +  K D+A  +F +M      P   ++N +++
Sbjct: 4   ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL      D A + F  +  +G  P+++ +  LI G CKAG+ +    +L +       P
Sbjct: 64  GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRP 122

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +   YT+++    +      G +IL  M   G   D   Y  +I    K+GR+ EA +  
Sbjct: 123 DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELF 182

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M   G   D V++ TLI      GKL+ A  L  EM ++G+E        LI  LCKA
Sbjct: 183 ERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKA 242

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TY 391
           G +  A    + +      ++  AYN ++D   K G++D  + +   M   D+F    TY
Sbjct: 243 GKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTY 302

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           + +V    +A RL  A +L       G +   +    ++ GL  +    EAK
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 9/294 (3%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA    ++M    L P     NI+LNGLCK R  D A+ +F  +   G  P +V+YN +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKG 247
           I GL    ++  A      + D+G  P+ I +TT++    +  + ++G  +L+ A+KR  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-- 119

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D F Y +VI  + K G L      +E+M+  G   D  +Y  LI+  CK G+++ AY
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDR 366
            L + M K G   D  T   LI+ L   G +  A  L+ E + + G++  LE  + ++  
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIER-GYEPYLEVQDSLIFA 238

Query: 367 LGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLK 416
           L K GK+D A  +++++  K   T    Y+S++   CK  R+    KLLL  ++
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 6/283 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T L+++   T     R+ +A  +    I  G  PD +TY  +I  + +  + +A   I
Sbjct: 575 LYTSLIDLLFST----GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M ++G+ PD   YNSL+ G  +   +  +  + D M+  GI P+  ++N LMH LF+
Sbjct: 631 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690

Query: 125 LGKPDEANRVFQDMICGDLTPCT-ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            GK D A  +F++M+  D  P T  ++ I+++GL K      A   F+ +   G +PE  
Sbjct: 691 DGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECH 750

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  LI  L KAGR+  A+ +++++   G  P+   Y+ ++     +       ++   M
Sbjct: 751 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 810

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            ++G   +   Y  +   F   GR  +  + ++Q  + GV ++
Sbjct: 811 MKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQHFSQGVAME 852



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           ++EA D +++M T G+  D+V+ N ++N  CK  K++ A  L  EM   G E    ++  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-------IDHAINVF 380
           +I GL     +  A      M   G + ++ A+  ++    K G+       ++ A+  F
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 381 ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
                 D F Y+S++H  CKA  L +  K+L   L +G     +A   ++D L   G   
Sbjct: 121 RP----DVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176

Query: 441 EAKKIQSKIR 450
           EA ++  ++R
Sbjct: 177 EAYELFERMR 186


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 208/407 (51%), Gaps = 4/407 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+ ++L  A A++   ++LG  PD+VT + L++ YC          ++++M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  T+ +LI G   ++  S ++ L+D+M++ G  PD+ +Y ++++ L + G  D 
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      FN +++ LCK R+ + A+ +F  ++  G  P +VTYN LI 
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  GR   A  +L  + +    PN +T+  ++   F+  K     ++   M ++    
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I  F    RL EA    + MV+     +I +YNTLIN +CK  ++E    L 
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   +  T+T +I G  +AG+   A++  + M      +++  Y+ ++  L   
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLS 413
           GK+D A+ +F+ ++  +     F Y++M+  +CKA ++  A  L  S
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 215/422 (50%), Gaps = 10/422 (2%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N+  +A A++   ++ G  PD+VTY  +++  C+    D    +LN+M  A I  +VV +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N++I    +   +  ++DL  EM   GI P+V +YNSL++CL   G+  +A+R+  +M+ 
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             + P   TFN +++   K      A ++   + +    P+ +TYN+LI G C   RL  
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ + K +      PN  TY T++    + ++ + G+E+   M ++G   +   Y T+I 
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            F + G    A    +QMV++ V  DI++Y+ L++  C  GKL+ A ++   ++K   E 
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           + + +  +I+G+CKAG +  A    +    +    ++  YN ++  L     +  A ++F
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558

Query: 381 ESME----VKDSFTYSSMVH-NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
             M+    + +S TY++++  NL    R  SA   L+  ++S   +  ++  ++V  + H
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE--LIKEMRSSGFVGDASTISLVTNMLH 616

Query: 436 SG 437
            G
Sbjct: 617 DG 618



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 204/428 (47%), Gaps = 7/428 (1%)

Query: 22  RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           ++ K E +I  G +   LG+  D+ TY++ I+ +C+         +L +M + G  PD+V
Sbjct: 95  KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T +SL+ G   +  +S ++ L+D+M+EMG  PD +++ +L+H LF   K  EA  +   M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P   T+  ++NGLCK    D AL +   ++       +V +N +I  LCK   +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E+   G  PN +TY +++ C     ++     +LS M  K    +   +  +
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I AF K G+L EA    E+M+   +  D ++YN LIN +C   +L+ A  +   M  +  
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T+  LI+G CK   ++        M++ G   N   Y  I+    + G  D A  
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF+ M       D  TYS ++H LC   +L +A  +     KS + +       +++G+ 
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 435 HSGCRREA 442
            +G   EA
Sbjct: 515 KAGKVGEA 522



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 197/390 (50%), Gaps = 4/390 (1%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           +++ A  +  D ++    P +V +N L+ A  +   F+   ++  +M+  GIS D+ TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
             I    R S LS +L +L +M+++G  PD+ + +SL++      +  +A  +   M+  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P T TF  +++GL  +     A+ +   + + G  P+LVTY  ++ GLCK G +  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L ++  +    N + + TI+    + R  ++ +++ + M+ KG   +   Y ++I  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               GR  +A+  +  M+   +  ++V++N LI+ + KEGKL  A  L +EM ++  + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+ +LI+G C    +  A+   ++M       N++ YN +++   K  +++  + +F 
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSA 407
            M     V ++ TY++++    +A    SA
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 187/373 (50%), Gaps = 4/373 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + N  + + CK   +E A  +  +    G+ P+VVTYN LI+  C +  +     
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M E  I+P+VVT+N+LI    +   L  +  L +EM++  I PD  +YN L++   
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              + DEA ++F+ M+  D  P   T+N ++NG CK +  ++ + +FR + + G V   V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  +I+G  +AG   +A+ + K++  +    + +TY+ ++       K    L I   +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     + F Y T+I    K G++ EA D    +    ++ D+V+YNT+I+  C +  L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLL 551

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L  +M++ G   +  T+  LI    +  +   +   ++ M   GF  +    + +
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611

Query: 364 VDRLGKDGKIDHA 376
            + L  DG++D +
Sbjct: 612 TNML-HDGRLDKS 623



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 147/302 (48%), Gaps = 4/302 (1%)

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I+ N L      D+A+ +F  + K    P +V +N L+  + K  +      + +++   
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G + +  TY+  + C  R  +  L L +L+ M + GY  D     +++  +    R+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              ++QMV  G + D  ++ TLI+      K   A  L+D+M ++G + D  T+  +++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
           LCK G+I  A   L  M      +N+  +N I+D L K   ++ A+++F  ME K    +
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
             TY+S+++ LC   R   AS+LL + L+  +        A++D     G   EA+K+  
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 448 KI 449
           ++
Sbjct: 353 EM 354



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 39/324 (12%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +F DM+     P    FN +L+ + K    +  + +   +Q  G   +L TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I I   C+  +L  A  +L ++   G+ P+ +T ++++     +++    + ++  M   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG----- 301
           GY  D F + T+I       +  EA   ++QMV  G Q D+V+Y T++N  CK G     
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 302 -----KLEAAYL-------------------------LLDEMEKQGFECDKYTHTILIDG 331
                K+EAA +                         L  EME +G   +  T+  LI+ 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
           LC  G    A   L  M +   + N+  +N ++D   K+GK+  A  + E M  +    D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 388 SFTYSSMVHNLCKAKRLPSASKLL 411
           + TY+ +++  C   RL  A ++ 
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMF 386



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 4/245 (1%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ + +  ++    +  K++L + +   M+  G + D + Y   I  F +  +L  A   
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M+  G + DIV+ ++L+N YC   ++  A  L+D+M + G++ D +T T LI GL  
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
                 A   ++ M + G   +L  Y  +V+ L K G ID A+N+   ME      +   
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++++ +LCK + +  A  L       G+R       ++++ L + G   +A ++ S + 
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 451 MAKIS 455
             KI+
Sbjct: 321 EKKIN 325



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           I ++ +A D    MV       IV +N L++   K  K E    L ++M+  G   D YT
Sbjct: 61  IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM- 383
           ++I I+  C+   +  A   L  M K+G++ ++   + +++      +I  A+ + + M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 384 ---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
                 D+FT+++++H L    +   A  L+   ++ G +        VV+GL   G   
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 441 EAKKIQSKIRMAKI 454
            A  + +K+  A+I
Sbjct: 241 LALNLLNKMEAARI 254


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 219/439 (49%), Gaps = 11/439 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  R + A  I+      G + DV +YN+LI  YC+    +    +L+RM   G+SP+
Sbjct: 124 FCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPN 180

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY++++        L  ++ +L   L+    PDV +   L+    +     +A ++F 
Sbjct: 181 AATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFN 240

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+N+++ G CK    D A+R  + L  +G  P+++++N++++ LC  G
Sbjct: 241 EMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGG 300

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFG 254
           R   A  +L  +   G  P+ +T+  ++   F  +K  LG  L +L  M + G+T +   
Sbjct: 301 RWMDAMKLLATMLRKGCLPSVVTFNILIN--FLCQKGLLGKALNVLEMMPKHGHTPNSRS 358

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           +  +I  F     +  A +Y+E MV+ G   DIV+YN L+   CK+GK++ A ++L ++ 
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G      ++  +IDGL K G  + A   LE M   G   +L     +V  L ++GK+ 
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVR 478

Query: 375 HAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+  F  ++      ++F Y+S++  LCK+++   A   L   +  G +  ++    ++
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538

Query: 431 DGLRHSGCRREAKKIQSKI 449
            G+ + G   +A K+ +++
Sbjct: 539 KGITYEGLAEDASKLSNEL 557



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 147/308 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK  RL++A   +      G  PDV+++NM++ + C    +     +L  M  
Sbjct: 255 NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLR 314

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P VVT+N LI    +  LL  +L++L+ M + G  P+  S+N L+         D 
Sbjct: 315 KGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDR 374

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + M+     P   T+NI+L  LCK+   D+A+ +   L   G  P L++YN +I 
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K G+   A  +L+E+   G  P+ IT T+++    R  K +  ++    +KR     
Sbjct: 435 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y ++I    K  +   A D++  MV  G +    +Y TLI     EG  E A  L 
Sbjct: 495 NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLS 554

Query: 311 DEMEKQGF 318
           +E+  +G 
Sbjct: 555 NELYSRGL 562



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 7/353 (1%)

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           RN  L      L+ M   G  PDV +  +L+    ++G+   A+++   +          
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           ++N++++G CK+   + ALR+   L + G  P   TY+ ++  LC  G+L+ A  +L   
Sbjct: 151 SYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             S   P+ +T T ++    +       +++ + M+ KG   D   Y  +I  F K GRL
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA  +++++ + G Q D++S+N ++   C  G+   A  LL  M ++G      T  IL
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I+ LC+ G +  A   LE M K G   N  ++N ++        ID AI   E M  +  
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             D  TY+ ++  LCK  ++  A  +L      G      +   V+DGL   G
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 440



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ++R  N  +  FC    +++A   +   +  G  PD+VTYN+L+ A C+    D    IL
Sbjct: 355 NSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 414

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +++   G SP +++YN++I G  +      +++LL+EM   G+ PD+ +  S++  L + 
Sbjct: 415 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 474

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA + F  +    + P    +N ++ GLCK++ T  A+     +   G  P   TY
Sbjct: 475 GKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATY 534

Query: 186 NILIKGLCKAGRLRTARWILKELGDSG 212
             LIKG+   G    A  +  EL   G
Sbjct: 535 TTLIKGITYEGLAEDASKLSNELYSRG 561



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 25/342 (7%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA--------NRVFQDMICGDLTPCTATF 150
           L D +++   P   WS   L +C+F + K + +        +  F       +       
Sbjct: 13  LYDGVIDFRKPKGTWSRKHLGNCVFAVSKYENSGLKGNLQHSERFSKGALNGVESSPDRV 72

Query: 151 NIMLN----------GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           N  LN           L +N   +   R    +   G  P+++    LI+  CK GR + 
Sbjct: 73  NTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKN 132

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  I+  L +SG   +  +Y  ++    ++ + +   E L  + R G + +   Y  V+ 
Sbjct: 133 ASQIMGILEESGAVIDVTSYNVLISGYCKSGEIE---EALRVLDRMGVSPNAATYDAVLC 189

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           +    G+LK+A   + + +      D+V+   LI+  CKE  +  A  L +EM  +G + 
Sbjct: 190 SLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKP 249

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D  T+ +LI G CK G +  A   L+ +   G   ++ ++N I+  L   G+   A+ + 
Sbjct: 250 DVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLL 309

Query: 381 ESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +M  K       T++ +++ LC+   L  A  +L    K G
Sbjct: 310 ATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 351



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 75/169 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  +++ A  I+      G  P +++YN +ID   +    +    +L  M  
Sbjct: 395 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 454

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++T  S++ G +R   +  ++     +    I P+ + YNS++  L +  +   
Sbjct: 455 KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSL 514

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           A     DM+     P  AT+  ++ G+      ++A ++   L   G V
Sbjct: 515 AIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 203/437 (46%), Gaps = 39/437 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  R+++A+ I+    R    P+  TY  LI  +C+  + D  + + +RM 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN------------- 116
           + G  P+ VTY++LI G      L  ++D+L+EM++ GI P V++Y              
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 117 ----------------------SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
                                 +L+  L + GK + A  ++  M+   L P T T+N ++
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N LC     + A  +F+ +  HG +P   TYN +IK  C  G ++ A  I  ++  +G +
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN ITY T++    +       + +L  MK  G   D + Y  +I+ F + G+L+ AT  
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M+  G+  + V+Y  +I+ Y    K++ A  L  +M + G      T+ ++I G  K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----T 390
             +I  A      M K G   N+  Y   +D L ++G+   A  +F  ME ++ F    T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 391 YSSMVHNLCKAKRLPSA 407
           YSS+++ LC+  R   A
Sbjct: 625 YSSLIYGLCQEGRAEDA 641



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 187/380 (49%), Gaps = 2/380 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   C   R E A  I    +  G LP   TYN +I  +C          I 
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M +AG SP+V+TYN+LI G  +   L+ ++ LL+ M   G+ PD W+Y  L+    + 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK + A  +F  M+   ++P   T+  +++G       D+AL +F  + + G +P   TY
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N++I G  K   +  A     ++   G  PN ITYT+ +    RN +  L  +I   M++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           + Y  + + Y ++I    + GR ++A  Y  + ++   G + ++ +Y TL+   C EG+ 
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L+  M+K+G +  +  +  L+ G CK   ++ A      M+ +GF  +L  Y  +
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735

Query: 364 VDRLGKDGKIDHAINVFESM 383
           +  L K+  I+ A  +F++M
Sbjct: 736 ICALCKENFIEEAQCIFQTM 755



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 182/384 (47%), Gaps = 2/384 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST+  N  +  FC    ++KA  I    ++ G  P+V+TYN LI  YC+  + +    +L
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+ PD  TY  LI+G +R   L  +  L   M+E GI P+  +Y +++   F L
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            K D+A  +F  M+     P + T+N+M++G  K      A      + K G +P ++TY
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGL-EILSAM 243
              I GLC+ GR   A  I  E+    + PN  TY++ I   C   R     +  +L+ +
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +   Y T++      GR  EA   +  M   G+Q     Y  L+   CK  K+
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E+A  +   M+  GF+     +  LI  LCK   I+ A+   + M +  ++S+  A+  +
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVL 770

Query: 364 VDRLGKDGKIDHAINVFESMEVKD 387
           +D L K+G+ D  + +   ME ++
Sbjct: 771 LDGLLKEGETDLCLKLLHVMESRN 794



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 22/388 (5%)

Query: 54  QFVS-----FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
           QF+S     +D GYT+              ++ +L+    +  ++  + D+  +ML  GI
Sbjct: 152 QFLSEINSKYDFGYTL-------------CSFTTLLIQLGKFDMVDLARDMYIKMLNSGI 198

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            P + ++N++++ L + G+  EA  +   +   D  P   T+  ++ G C+N   D A  
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           MF  + K G  P  VTY+ LI GLC  GRL  A  +L+E+   G  P   TYT  +    
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
                   +E+L  MK++G   +   +  +I+   + G+ + A     +M+ DG+    V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YN LIN  C EG+ E A+ +   M   G      T+  +I   C  G+I+ A +  + M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
            K G   N+  YN ++    K G +++A+ + E M+      D++TY+ ++    +  +L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDG 432
             A+ L    ++ G+        A++DG
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDG 526



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 190/441 (43%), Gaps = 39/441 (8%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN---------------------- 81
           ++  L+    +F   D    +  +M  +GI P ++T+N                      
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 82  -------------SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
                        SLI G  RN  L  +  + D M++ G  P+  +Y++L++ L   G+ 
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  + ++M+   + P   T+ I L  LC    +  A+ +   ++K G VP + T+  L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GL + G+   A  +  ++   G  P  +TY  ++       +++    I   M   G 
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  +I  F  +G +++A    ++M+  G   ++++YNTLI  YCK+G L  A  
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL+ M+  G + D +T+T LI G  + G ++ A      M + G   N   Y  I+D   
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 369 KDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              K+D A+ +F    ES  +  S TY+ M+    K   +  A       +K G+     
Sbjct: 529 NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
              + +DGL  +G    A KI
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKI 609



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 9/285 (3%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S++  N+ +  F K N + +AE      ++ G+LP+V+TY   ID  C+       + I 
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCS--LDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + M +    P++ TY+SLI G  +      +   +LL  +   G  P+V +Y +L+  L 
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+  EA+++   M    L P    +  +L G CKN   ++AL +F  +   GF   L 
Sbjct: 671 GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS 730

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y  LI  LCK   +  A+ I + + +     + + +T ++    +  +  L L++L  M
Sbjct: 731 DYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVM 790

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           + +  T +          +V + R   A D   ++     QL IV
Sbjct: 791 ESRNCTLN-------FQTYVMLARELSALDCAIKIPQISQQLGIV 828


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 194/368 (52%), Gaps = 3/368 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N+L+    +     +   + + M+  G+   VV++N++I+G  R   L  +
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L   M E G+ PDV++Y +L+  L ++G+ ++A  VF+ M    + P    F I+++ 
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    +  L + R +++ G  P+ VTYN ++ GLC+A  L++A  I+ E+  +G  P+
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYTT++    +  +  + +EI   M  +G   D   Y  +I+   K GR  +A   + 
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G++ D  +Y  +I+ +C++G ++    LL EM+ +G +    T+ ++++G CK G
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLG 534

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--VKDSFTYSSM 394
            +K A + L  M  IG   +   YN ++D   K GK+   I   +S +  V D   Y+S+
Sbjct: 535 QMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD-IEELKSAKGTVPDLGVYTSI 593

Query: 395 VHNLCKAK 402
           V  + K K
Sbjct: 594 VGEIVKKK 601



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           ++L+ G+PP+   +N LM  L +LG+   A  VF +M    +     +FN M++G+C+  
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A  + R + + G  P++ TY  LI+GLC+ GR+  AR + +++   G  PNA+ +T
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +    +  LE+   M+ +G   D   Y  ++    +   LK A+  + +M + 
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D V+Y TLI+ YCKE +L+ A  +   M  +G   D+ T+T LI GL KAG    A
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHN 397
              L  M + G + +   Y  ++D   + G +   + + + M+ K       TY+ +++ 
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 529

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
            CK  ++ +A  LL + +  GV
Sbjct: 530 FCKLGQMKNADMLLNAMINIGV 551



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 143/294 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+A  L+ AE +       GV PDV TY  LI   C+    +    +  +M 
Sbjct: 278 FNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMC 337

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+ V +  LI    +       L+L  EM E G+ PD  +YN++++ L +     
Sbjct: 338 GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLK 397

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A+ +  +M    L P T T+  +++G CK    D A+ + + +   G   + VTY  LI
Sbjct: 398 SASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALI 457

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL KAGR   A  +L E+ ++G  P+  TYT ++    R    K GL +L  M+ KG  
Sbjct: 458 SGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRK 517

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                Y  ++  F K+G++K A   +  M+  GV  D ++YN L++ +CK GK+
Sbjct: 518 PGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 571



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            V++G L  A +  ++M + GV+  +VS+NT+I+  C+ G L+ A  L   M + G   D
Sbjct: 250 LVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPD 309

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            YT+  LI GLC+ G I+ AR   E M   G   N   +  ++D   K G  +  + +  
Sbjct: 310 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHR 369

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M  +    D+ TY+++V+ LC+A+ L SAS +++    +G+R        ++DG     
Sbjct: 370 EMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGY---- 425

Query: 438 CRREAKKIQSKIRMAKISH 456
           C+ E   +  +I+   ++ 
Sbjct: 426 CKEEELDMAMEIKQNMVAE 444



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 31/269 (11%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  PE   +N+L++ L + G L +A+ +  E+   G     +++ T++    R       
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             +   M   G T D + Y  +I    ++GR+++A    E+M   G++ + V +  LI+ 
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +CK+G  E    L  EM ++G   D  T+  +++GLC+A ++K A   +  M   G    
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP- 413

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
                                         D+ TY++++   CK + L  A ++  + + 
Sbjct: 414 ------------------------------DTVTYTTLIDGYCKEEELDMAMEIKQNMVA 443

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            GV + +    A++ GL  +G   +A+++
Sbjct: 444 EGVGLDEVTYTALISGLSKAGRSADAERV 472


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 223/461 (48%), Gaps = 7/461 (1%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           +F  L T  +NI V   CKA +LE+A  I     + G  PD VTY  LID   +    D 
Sbjct: 419 LFPNLLT--VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDE 476

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            Y +  +M +AG + + V Y SLI     +        +  E++  G  PD+   N+ M 
Sbjct: 477 AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMD 536

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           C+F+ G+ ++   +F+D+      P   +++I+++GL K         +F  +++ GF  
Sbjct: 537 CVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL 596

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +   YN ++ G CK+G++  A  IL+E+ +    P   TY  I+    +  +      + 
Sbjct: 597 DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF 656

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
              K KG   +   Y ++I  F K+GR+ EA   +E+M+  G+  ++ ++N+L++   K 
Sbjct: 657 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 716

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            ++  A +    M++     + YT++ILI+GLC+      A +  + M K G   N+  Y
Sbjct: 717 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 776

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             ++  L K G I  A ++FE  +    + D+ ++++++  +  A R   A ++      
Sbjct: 777 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRL 836

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR-MAKISH 456
            G RI   +  +++D L  S C  +A  + + +R +AK  H
Sbjct: 837 RGCRINIKSCISLLDALNKSECLEQAAIVGAVLREIAKSQH 877



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 44/443 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA RL +AE +         +P    YN +I  Y     F+  Y +L R+RE G 
Sbjct: 291 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 350

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV++NS++    +   +  +L L  E+++    P+  +YN ++  L   G+ +EA R
Sbjct: 351 IPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 409

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M    L P   T NIM++ LCK R  + A ++F    + G  P+ VTY  LI GL 
Sbjct: 410 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           K G++  A  + +++ D+GH  N + YT                                
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 529

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  I   ++  G+  D   Y  +I    K G+ +E ++    M
Sbjct: 530 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 589

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G  LD  +YN +++ +CK GK+  AY +L+EM+++  +    T+  ++DGL K   +
Sbjct: 590 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E     G + N+  Y+ ++D  GK G+ID A  + E M  K    + +T++S+
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709

Query: 395 VHNLCKAKRLPSASKLLLSCLKS 417
           +  L KA+ +  A    L C +S
Sbjct: 710 LDALVKAEEINEA----LVCFQS 728



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 190/368 (51%), Gaps = 4/368 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+  TYN++ID  C     +  Y IL+ M  A + P+++T N ++    +   L  +  +
Sbjct: 386 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 445

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +   + G  PD  +Y SL+  L + G+ DEA R+F+ M+          +  ++     
Sbjct: 446 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 505

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +   ++  ++F+ L + G  P+L   N  +  + KAG +   R I +++   G  P+  +
Sbjct: 506 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 565

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    +  + +    I  AMK++G+  D   Y  V+  F K G++ +A + +E+M 
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              VQ  + +Y  +++   K  +L+ AY+L +E + +G E +   ++ LIDG  K G I 
Sbjct: 626 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 685

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSSMV 395
            A L LE M K G   N+  +N ++D L K  +I+ A+  F+SM E+K   +++TYS ++
Sbjct: 686 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 745

Query: 396 HNLCKAKR 403
           + LC+ ++
Sbjct: 746 NGLCRVQK 753



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 203/475 (42%), Gaps = 40/475 (8%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
               +A RL+ A   +    RL   P    Y +LI A  +    +    +L +M+E G  
Sbjct: 152 AALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYE 211

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
             V  + +L+    R   ++ +L L+DE+    + PD+  YN  + C  + G  D A + 
Sbjct: 212 VGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKF 271

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F ++    L P   ++  M+  LCK      A  +F  ++    VP    YN +I G   
Sbjct: 272 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 331

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           AGR   A  +L+ L + G  P+ +++ +I+ C  + RK    L +   MK+     +   
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NSST 390

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I      GR++EA   +++M    +  ++++ N +++  CK  KLE AY + +   
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY-------------- 360
           ++G   D  T+  LIDGL K G +  A    E M   G ++N   Y              
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510

Query: 361 ---------------------NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
                                N  +D + K G+++    +FE +     + D  +YS ++
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           H L KA +    S +  +  + G  +   A  AVVDG   SG   +A +I  +++
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 201/462 (43%), Gaps = 40/462 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +    +A R E+A  ++     +G    V  +  L+ A  +         +++ ++ 
Sbjct: 183 TVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 242

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + + PD+V YN  I    +   +  +     E+   G+ PD  SY S++  L + G+  E
Sbjct: 243 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGE 302

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG---------------------------------- 156
           A  +F  M      PC   +N M+ G                                  
Sbjct: 303 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 362

Query: 157 -LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L K R  D AL +F  ++K    P   TYNI+I  LC  GR+  A  IL E+  +   P
Sbjct: 363 CLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T   ++    + RK +   +I  +  ++G   D   YC++I    K G++ EA    
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 481

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M+  G   + V Y +LI  +   G+ E  + +  E+ ++G + D       +D + KA
Sbjct: 482 EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKA 541

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++  R+  E +   GF  ++ +Y+ ++  L K G+     N+F +M+ +    D+  Y
Sbjct: 542 GEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 601

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +++V   CK+ ++  A ++L    +  V+   +   A+VDGL
Sbjct: 602 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+  L +  +  F K  R+++A  I+ + ++ G+ P+V T+N L+DA  +    +    
Sbjct: 665 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 724

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M+E    P+  TY+ LI G  R    + +     +M + G+ P+V +Y +++  L 
Sbjct: 725 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 784

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G   +A  +F+        P  A+FN ++ G+        A ++F   +  G    + 
Sbjct: 785 KVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIK 844

Query: 184 TYNILIKGLCKAGRLRTAR---WILKELGDSGHAPNAI 218
           +   L+  L K+  L  A     +L+E+  S HA  ++
Sbjct: 845 SCISLLDALNKSECLEQAAIVGAVLREIAKSQHASRSL 882


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 210/436 (48%), Gaps = 42/436 (9%)

Query: 22  RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +L+K + +I  G +   LG+  D+ T+N++I+ +C         +IL +M + G  PD V
Sbjct: 97  KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T  SL+ G  R + +S ++ L+D+M+E+G  PD+ +YN++                    
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-------------------- 196

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                          ++ LCK +  ++A   F+ +++ G  P +VTY  L+ GLC + R 
Sbjct: 197 ---------------IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L ++      PN ITY+ ++    +N K     E+   M R     D   Y ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +       R+ EA    + MV+ G   D+VSYNTLIN +CK  ++E    L  EM ++G 
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T+  LI G  +AG++  A+     M+  G   ++  YN ++  L  +G+++ A+ 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +FE M+ +    D  TY++++  +CK  ++  A  L  S    G++        ++ GL 
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 435 HSGCRREAKKIQSKIR 450
             G   E + + +K++
Sbjct: 482 TKGLLHEVEALYTKMK 497



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 170/320 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ NR+  A +++   + +G  PD+V YN +ID+ C+    +  +     +   GI P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +L+ G   +S  S +  LL +M++  I P+V +Y++L+    + GK  EA  +F+
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T++ ++NGLC +   D A +MF  +   G + ++V+YN LI G CKA 
Sbjct: 285 EMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+   G   N +TY T+++  F+        E  S M   G + D + Y 
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G L++A    E M    + LDIV+Y T+I   CK GK+E A+ L   +  +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464

Query: 317 GFECDKYTHTILIDGLCKAG 336
           G + D  T+T ++ GLC  G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 190/375 (50%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC   ++  A +I+   ++LG  PD VT   L++ +C+        +++++M 
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD+V YN++I    +   ++ + D   E+   GI P+V +Y +L++ L    +  
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+  DMI   +TP   T++ +L+   KN     A  +F  + +    P++VTY+ L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC   R+  A  +   +   G   + ++Y T++    + ++ + G+++   M ++G  
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F + G + +A ++  QM   G+  DI +YN L+   C  G+LE A ++
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            ++M+K+  + D  T+T +I G+CK G ++ A      ++  G   ++  Y  ++  L  
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 370 DGKIDHAINVFESME 384
            G +     ++  M+
Sbjct: 483 KGLLHEVEALYTKMK 497



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 160/333 (48%), Gaps = 4/333 (1%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K ++A  +F DM+     P    FN +L+ + K +  D  + + + ++  G   +L T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           I+I   C   ++  A  IL ++   G+ P+ +T  +++    R  +    + ++  M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY  D   Y  +I +  K  R+ +A D+ +++   G++ ++V+Y  L+N  C   +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +M K+    +  T++ L+D   K G +  A+   E M ++  D ++  Y+ +V+ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L    +ID A  +F+ M  K    D  +Y+++++  CKAKR+    KL     + G+   
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                 ++ G   +G   +A++  S++    IS
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 209/440 (47%), Gaps = 6/440 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C   R+  A A+  D +  G  P VVTY++L+DA C+   +     +L+
Sbjct: 251 TFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLD 310

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G  PD+VTYN LI        +  +L++L  +   G  PD  +Y  ++  L    
Sbjct: 311 EMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSE 370

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +  +M   +  P   TFN ++  LC+    D A+ +   + +HG V ++VTY+
Sbjct: 371 RWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYS 430

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++ GLC  GR+  A  +L  L   G  P+ I YTT++K      +++   E+++ M   
Sbjct: 431 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCS 490

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D   + TV+A+  + G +  A   +EQM  +G   DIV+YN +I+  C E  ++ A
Sbjct: 491 DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDA 550

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL +++  G + D  T   L+ GLC     + A   +  M +     +   +N ++  
Sbjct: 551 MELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITS 610

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L + G +  AI   + M     V +S TYS +V  L KA +  +A + LLS + +G   L
Sbjct: 611 LCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE-LLSGMTNGTPDL 669

Query: 423 KSAQKAVVDGLRHSGCRREA 442
            +    V+  L  +G   EA
Sbjct: 670 IT-YNTVISNLTKAGKMEEA 688



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 194/414 (46%), Gaps = 6/414 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V + C+   +++A  ++      G + D+VTY+ ++D  C     D    +L+R++
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK 453

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD + Y +++ G         + +L+ EML    PPD  ++N+++  L Q G  D
Sbjct: 454 SYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVD 513

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A RV + M     +P   T+N +++GLC     D+A+ +   LQ  G  P++VT+N L+
Sbjct: 514 RAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLL 573

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC   R   A  ++  +  S   P+ +T+ T++    +       +E L  M   G  
Sbjct: 574 KGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCV 633

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  V+ A +K G+ + A + +  M T+G   D+++YNT+I+   K GK+E A  L
Sbjct: 634 PNSSTYSIVVDALLKAGKAQAALELLSGM-TNGTP-DLITYNTVISNLTKAGKMEEALDL 691

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M   G   D  T+  L  G+C+      A   L  +   G   +   YN ++    +
Sbjct: 692 LRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCR 751

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           D + D AI+ F  M     + D  TY  ++  L     L  A +LL S    GV
Sbjct: 752 DRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 192/411 (46%), Gaps = 10/411 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C   R+  AE +      LG    VVTYN +++ YC+    +    ++N M  
Sbjct: 191 NILIKRLCSDGRVSDAERVFA---ALGPSATVVTYNTMVNGYCRAGRIEDARRLINGM-- 245

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PD  T+N LI        +  +L + D+ML  G  P V +Y+ L+    +     +
Sbjct: 246 -PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQ 304

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M      P   T+N+++N +C     D AL +   L  HG  P+ VTY  ++K
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC + R +    +L E+  +  AP+ +T+ TI+    +       +E++  M   G   
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +++     +GR+ +A + + ++ + G + D ++Y T++   C   + E A  L+
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM       D+ T   ++  LC+ G +  A   +E M++ G   ++  YNCI+D L  +
Sbjct: 485 AEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE 544

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
             ID A+ +   ++      D  T+++++  LC   R   A +L+ + ++S
Sbjct: 545 SCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS 595



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 155/342 (45%), Gaps = 22/342 (6%)

Query: 119 MHCLFQLGKPDEANRVFQDMI------CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           +  L Q G+ DEA  +F  M       C  + PC    NI++  LC +    +A R+F  
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPC----NILIKRLCSDGRVSDAERVFAA 212

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNR 231
           L     V   VTYN ++ G C+AGR+  AR ++  +      P+  T+  +++  C R R
Sbjct: 213 LGPSATV---VTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGR 266

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
                L +   M  +G +     Y  ++ A  K    ++A   +++M   G + DIV+YN
Sbjct: 267 -IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYN 325

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            LIN  C EG ++ A  +L  +   G + D  T+T ++  LC +   K     L  M   
Sbjct: 326 VLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN 385

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
               +   +N IV  L + G +D AI V + M     V D  TYSS++  LC   R+  A
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDA 445

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +LL      G +    A   V+ GL  +     A+++ +++
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 208/417 (49%), Gaps = 4/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P+++ YN +I+A C+  +     TI+ ++ E+ +SPD  TY S+I G  R   L  +
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + ++M + G  P+  +Y++L++ L   G+ +EA  + ++MI   + P   T    +  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     ++A R+F  ++  G  P + TY  LI GLC +G L+ A  +   +   G  PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  ++     NR+ K    +L+ M R G + +   Y  +I  +  +G  K+A   M 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G   ++V+YNT+I  YC  G   +A  +LD M   G + D++++T LI G CK  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A      M   G   N   Y  ++D   KD K+D A ++ E M+      +  TY+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++H L K      A +L    ++ G+        A++DGL  +G    A ++ +K+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 203/450 (45%), Gaps = 39/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  AE I+       + PD  TY  +I  +C+    D+   + N+M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G  P+ VTY++LI G   +  ++ + DL+ EM+  GI P   +    +  L  +G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A R+F DM      P   T+  +++GLC +     A+ +F  + + G  P  VTYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 189 -----------------------------------IKGLCKAGRLRTARWILKELGDSGH 213
                                              IKG C  G  + A  ++  +   GH
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           + N +TY TI+K    +      L IL  M+  G   D + Y  +I  F KI +++ A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV DG+  + V+Y  LI+ YCK+ KL+ A  LL+ M++ G   +  T+ +LI GL 
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K  N  GA    + M + G   N+  Y  ++D L K+G    A+ +F  M     + +  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TYSS++  L +  ++  A  L     + G+
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGL 666



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 202/414 (48%), Gaps = 17/414 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L+NI V      NR  K   ++++ + R G  P++VTYN +I  YC          ++N 
Sbjct: 396 LINILV-----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G S ++VTYN++I G   +   + +L +LD M + G  PD WSY  L+    ++ K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            + A  +F +M+   L P   T+  +++G CK+   D A  +   +++ G  P + TYN+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL K      A  + K + + G  PN +TYT ++    +N    L LE+ + M  +G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y ++I A  + G+++EA +   ++   G+  D ++Y  +I  Y   GK+E A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL--EYMNKIGFDSNLEAYNCIVD 365
             L  M K G +   +T+ +LI GL     +   RL    + +    F       + +  
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 750

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              K  ++D  ++V    +V++     ++V NL  A R   A++LL S +  G+
Sbjct: 751 MSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWFEANELLGSMISQGL 795



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           + L+ + ++G+   +  Y++L+   +R  + +  +D    ML  G+ P++  YN++++ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   +A  + + +   +++P T T+  M+ G C+    D+AL++F  + K G  P  
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTY+ LI GLC +GR+  A  +++E+   G  P A T T  +        Y+    +   
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK KG   + + Y  +I+     G LK A     +M  DGV  + V+YN LIN+  +  +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A+++L+ M + G   +  T+  +I G C  G+ K A L +  M + G  +NL  YN 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           I+      G    A+ + + M       D ++Y+ ++   CK  ++ SA  L    +  G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 419 VRILKSAQKAVVDG----------------LRHSGCR 439
           +   +    A++DG                ++ SGCR
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 169/370 (45%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C     E A  + +D    G  P+V TY  LI   C          + +RM   G+
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ VTYN+LI     N  +  +  +L+ M   G  P++ +YN ++     LG P +A  
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V  +M+    +    T+N ++ G C +  T +ALR+   ++  G  P+  +Y  LI G C
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++ +A  +  E+ D G  PN +TYT ++    ++ K      +L  MKR G   +  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    K      A +  + M+ +G+  ++V+Y  +I+  CK G    A  + ++M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +QG   +  T++ LI  L + G ++ A      + + G   +   Y  +++     GK+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 374 DHAINVFESM 383
           +HA N    M
Sbjct: 687 EHAFNFLGRM 696



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 183/400 (45%), Gaps = 30/400 (7%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C FCK +++E A  +  + +  G+ P+ VTY  LID YC+    D   ++L  M+ +G 
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+V TYN LI G T+ +  S + +L   M+E GI P+V +Y +++  L + G    A  
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  MI     P   T++ ++  L +    + A  +F  L++HG +P+ +TY  +I+   
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G++  A   L  +  +G  P   TY  ++K   +N +Y L  + L+A+         F
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKN-EYLLADQRLAALPDVVPNCS-F 738

Query: 254 GYCT---------------------------VIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
           GY T                           +++     GR  EA + +  M++ G+  D
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
             +YN+L+    +   ++ A  +   M  QG E     +  LI  LC+    K AR+  E
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            M    ++ +      ++D L +DG  D  +     ME +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  ++E+AE +  +  R G++PD +TY  +I+AY      +  +  L RM +AG  P + 
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 79  TYNSLIAGATRNSLLS-------------CSLD-----------LLDEMLEMGIPPDVWS 114
           TY  LI G     LL+             CS             +  ++ E+     V  
Sbjct: 707 TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
            N+L+  L   G+  EAN +   MI   L P    +N +L  L + R  D A+ +F+ + 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G    L  Y  LI  LC+  R + AR   + +      P+ +    ++    R+    
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIA 260
           L +E L  M+ + Y    F   T++A
Sbjct: 887 LCMEFLHIMETRRY-MPSFHIYTILA 911



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 76/161 (47%)

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++K C         +  L  + + G     F Y  ++    ++G      D   +M+++G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           VQ +++ YN +IN  CK+G +  A  ++ ++ +     D +T+T +I G C+  ++  A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
                M K G + N   Y+ +++ L   G+++ A ++   M
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 56/131 (42%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+ PD   YNSL+    R   +  ++ +   M   G    +  Y  L+  L 
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           QL +  EA   F++M+     P      ++++GL ++ Y D  +     ++   ++P   
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 905

Query: 184 TYNILIKGLCK 194
            Y IL +   K
Sbjct: 906 IYTILAREASK 916


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 187/374 (50%), Gaps = 2/374 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  + ++A  ++      G+ PDVVTY  LID  C+         +LN M E G  P 
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN L++G  +  L+  +  +L  M+E G   DV +YN+LM  L   GK DEA ++F 
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            M   +  L P   TFN+++ GLCK      A+++ R + K G    LVTYN+L+ G  K
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           AG+++ A  + K++ D G  PN+ TY+ ++    + R   +   +   M+  G     F 
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++A+  K G L++A    ++M     + DI+S+NT+I+   K G  +    L  +M 
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G   D  T + LI+ L K G +  A+  LE M   GF  +   Y+ ++  L   G   
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653

Query: 375 HAINVFESMEVKDS 388
             IN+   M  K +
Sbjct: 654 EIINLLHQMAAKGT 667



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 217/439 (49%), Gaps = 6/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA +L++A  ++++    G  P+ VT   L+D  C+    D    +L  M++
Sbjct: 183 NTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK 242

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DVV Y +LI+G   N  L    +L DEML  GI  +V +Y+ L+H L +LG+  E
Sbjct: 243 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKE 302

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN V   M    + P   T+  +++GLCK+    +A+ +   + + G  P  VTYN+L+ 
Sbjct: 303 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 362

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G +  A  IL+ + + G   + +TY T+MK      K    L++ ++M       
Sbjct: 363 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 422

Query: 251 DG--FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           +   F +  +I    K GRL +A     +MV  G   ++V+YN L+    K GK++ A  
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 482

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  ++   GF  + +T++ILIDG CK   +  A+     M   G +  L  YN ++  L 
Sbjct: 483 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 542

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K+G ++ A ++F+ M       D  ++++M+    KA       +L +  ++ G+R    
Sbjct: 543 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 602

Query: 425 AQKAVVDGLRHSGCRREAK 443
               +++ L   G   EAK
Sbjct: 603 TFSTLINRLSKLGELDEAK 621



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 215/456 (47%), Gaps = 17/456 (3%)

Query: 5   LSTRLLNICVCTFCKAN-RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           L T+L ++C     K N +  +A ++    +   +LP   T N L+DA  +  ++   ++
Sbjct: 40  LETQLRSLCQ----KPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFS 95

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  RM    + P   + ++LI              ++  +L+ G   +V+  N ++  L 
Sbjct: 96  VYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLC 155

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   EA  + ++M    ++P   ++N ++NGLCK +    A+ +   ++  G  P  V
Sbjct: 156 RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 215

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T   L+ GLCK GR+  A  +L+ +   G   + + Y T++     N     G E+   M
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG + +   Y  ++    ++G+ KEA   +  M   G+  D+V+Y  LI+  CK+G+ 
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  LL+ M ++G E    T+ +L+ GLCK G +  A   L  M + G  +++  YN +
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395

Query: 364 VDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           +  L   GK+D A+ +F SM   ++      FT++ ++  LCK  RL  A K+    +K 
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           G     S    V   +   GC + A KI+  + + K
Sbjct: 456 G-----SCGNLVTYNMLLGGCLK-AGKIKEAMELWK 485



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 204/436 (46%), Gaps = 8/436 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F  A + +    ++   ++ G   +V   N+++   C+         ++  M    +SPD
Sbjct: 119 FADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPD 178

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V+YN+LI G  +   L  ++ LL EM   G  P+  +  +LM  L + G+ DEA  + +
Sbjct: 179 IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLE 238

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M           +  +++G C N   D    +F  +   G    +VTY+ L+ GLC+ G
Sbjct: 239 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 298

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           + + A  +L  + + G  P+ +TYT ++    ++ +    +++L+ M  KG       Y 
Sbjct: 299 QWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYN 358

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM--E 314
            +++   K G + +A   +  M+  G + D+V+YNTL+   C +GK++ A  L + M   
Sbjct: 359 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 418

Query: 315 KQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           +   E + +T  +LI GLCK G + K  ++H   M K G   NL  YN ++    K GKI
Sbjct: 419 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH-RKMVKKGSCGNLVTYNMLLGGCLKAGKI 477

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A+ +++ +     V +SFTYS ++   CK + L  A  L       G+         +
Sbjct: 478 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537

Query: 430 VDGLRHSGCRREAKKI 445
           +  L   G   +AK +
Sbjct: 538 MASLCKEGSLEQAKSL 553



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 190/402 (47%), Gaps = 6/402 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           VLP   + + LI+ +        G+ ++  + + G + +V   N ++ G  RN  +  ++
Sbjct: 105 VLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAM 164

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L+ EM    + PD+ SYN+L++ L +  K  EA  +  +M      P + T   +++GL
Sbjct: 165 GLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGL 224

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+   D A+ +   ++K GF  ++V Y  LI G C  G L   + +  E+   G + N 
Sbjct: 225 CKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANV 284

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY+ ++    R  ++K    +L+AM   G   D   Y  +I    K GR   A D +  
Sbjct: 285 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 344

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV  G +   V+YN L++  CKEG +  A+ +L  M ++G + D  T+  L+ GLC  G 
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 404

Query: 338 IKGARLHLEYM--NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTY 391
           +  A      M  N+   + N+  +N ++  L K+G++  A+ +   M  K S     TY
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 464

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           + ++    KA ++  A +L    L  G          ++DG 
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 90/185 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FCK   L  A+ +  +    G+ P +  YN L+ + C+  S +   ++   M  
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           A   PD++++N++I G  +        +L  +M+EMG+ PD  ++++L++ L +LG+ DE
Sbjct: 560 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 619

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + M+    TP    ++ +L GL     T   + +   +   G V +    + ++ 
Sbjct: 620 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679

Query: 191 GLCKA 195
            LC +
Sbjct: 680 CLCHS 684


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 206/413 (49%), Gaps = 4/413 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   +++A  +    +  G+ PD  TY +L+D +C+         I   M  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G++P+  TY +LI G  +   +  +L + DEM+  G+  +V +YN+++  + + G+  +
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   + P T T+N++++G  K+     A  +   ++     P   TY++LI 
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC +  L+ A  +L ++  +G  PN   Y T++K   +  +Y++ +E+L  M   G   
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  +I    +  +++EA   +  M   G++ +  +Y   INLY K G+++ A    
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYF 579

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G   +   +TILI G C  GN   A    + M + G   ++ AY+ I+  L K+
Sbjct: 580 KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKN 639

Query: 371 GKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           GK   A+ VF    ++  V D F Y+S++   CK   +  AS+L    L +G+
Sbjct: 640 GKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 213/452 (47%), Gaps = 46/452 (10%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+    N  +    KA  + KA ++  + +  G+ PD  TYN+LID Y +         
Sbjct: 378 KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACE 437

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M+   ++P   TY+ LI+G   +S L  + ++LD+M+  G+ P+V+ Y +L+    
Sbjct: 438 LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK------------------------ 159
           Q  + + A  + + MI   + P    +N ++ GLC+                        
Sbjct: 498 QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557

Query: 160 ------NRYTDN-----ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
                 N Y+ +     A R F+ +   G VP  V Y ILIKG C  G    A    K +
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            + G  P+   Y+ I+    +N K K  + +     + G   D F Y ++I+ F K G +
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINL--YCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           ++A+   ++M+ +G+  +IV YNTLIN   YCK G L  A+ L DEM  +G   D Y + 
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 737

Query: 327 ILIDGLCKAGNIKGA--RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ILIDG  K GN++ A    H      +G   +L A+N ++D   K GK+  A  +F+ M 
Sbjct: 738 ILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMV 794

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
            K    +  TY+ ++    KA+ +  A +L L
Sbjct: 795 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 826



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 5/409 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++PDV TY  +I A+C+      G  +L+ M E    P++ TYN+ I G  +   +  +L
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEAL 296

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++   M+E G+ PD  +Y  L+    +  +  EA  +F+ M    L P   T+  +++G 
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            K    + ALR+   +   G    +VTYN +I G+ KAG +  A  +  E+  +G  P+ 
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY  ++    ++       E+L+ MK +  T   F Y  +I+       L++A + ++Q
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M+ +GV+ ++  Y TLI  Y +E + E A  LL  M   G   D + +  LI GLC+A  
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 393
           ++ A++ L  M + G   N   Y   ++   K G+I  A   F+ M     V ++  Y+ 
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           ++   C       A       L+ G+     A  A++  L  +G  +EA
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 214/483 (44%), Gaps = 68/483 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   C ++ L+KA  ++   IR GV P+V  Y  LI AY Q   ++    +L  M  
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+  YN LI G  R   +  +  LL +M E GI P+  +Y + ++   + G+   
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQV 574

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC-------------------------------- 158
           A R F+DM+   + P    + I++ G C                                
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634

Query: 159 ---KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              KN  T  A+ +F    K G VP++  YN LI G CK G +  A  +  E+  +G  P
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694

Query: 216 NAITYTTIM------KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           N + Y T++      K       +KL  E++S    KG + DG+ YC +I    K G L+
Sbjct: 695 NIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS----KGISPDGYIYCILIDGCGKEGNLE 750

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A     +     V   + ++N+LI+ +CK GK+  A  L D+M  +    +  T+TILI
Sbjct: 751 KALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 809

Query: 330 DGLCKAGNIKGAR---LHLEYMNKIG----FDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           D   KA  ++ A    L +E  N I     + S L +YN I +R          I++F+ 
Sbjct: 810 DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF-------KMISLFKD 862

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ME +    D+  Y  M    CK  +   A KLL   L  G+++    +  V D L    C
Sbjct: 863 MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKL----EDDVFDALIFHLC 918

Query: 439 RRE 441
           + +
Sbjct: 919 KEK 921



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 40/435 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K   +E+A  I  + I  G+  +VVTYN +I    +        ++ N M  AGI PD
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPD 415

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN LI G  ++  ++ + +LL EM    + P  ++Y+ L+  L       +AN V  
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   + P    +  ++    +    + A+ + + +  +G +P+L  YN LI GLC+A 
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG-------------------- 236
           ++  A+ +L ++G+ G  PNA TY   +    ++ + ++                     
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595

Query: 237 ------------LEILSAMK---RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                       +E LS  K    KG   D   Y  +I +  K G+ KEA     + +  
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID--GLCKAGNIK 339
           GV  D+  YN+LI+ +CKEG +E A  L DEM   G   +   +  LI+  G CK+GN+ 
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT---YSSMVH 396
            A    + M   G   +   Y  ++D  GK+G ++ A+++F   + K   +   ++S++ 
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 775

Query: 397 NLCKAKRLPSASKLL 411
           + CK  ++  A +L 
Sbjct: 776 SFCKHGKVIEARELF 790



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 192/408 (47%), Gaps = 5/408 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           ++  +++ ID +      +   ++       G  P ++  N+L+    + +++     + 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M+E  I PDV++Y +++    ++G   +   V  +M   +  P   T+N  + GLC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D AL + + + + G  P+  TY +L+ G CK  R + A+ I + +  SG  PN  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T ++    +    +  L I   M  +G   +   Y  +I    K G + +A     +M+ 
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D  +YN LI+ Y K   +  A  LL EM+ +      +T+++LI GLC + +++ 
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
           A   L+ M + G   N+  Y  ++    ++ + + AI + + M     + D F Y+ ++ 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
            LC+AK++  A  LL+   + G++       A ++    SG  + A++
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  +  + +  K  + ++A  + +  ++ GV+PDV  YN LI  +C+    +    + + 
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 68  MREAGISPDVVTYNSLIA--GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           M   GI+P++V YN+LI   G  ++  L+ +  L DEM+  GI PD + Y  L+    + 
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  ++A  +F +     +   +A FN +++  CK+     A  +F  +      P +VTY
Sbjct: 747 GNLEKALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 805

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR-NRKYKLGLEILSAMK 244
            ILI    KA  +  A  +  ++      PN +TYT+++    +   ++K+ + +   M+
Sbjct: 806 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM-ISLFKDME 864

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   D   Y  + +A+ K G+  EA   + + + +G++L+   ++ LI   CKE ++ 
Sbjct: 865 ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIS 924

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
               LL EM K+       T   L+ G  K+GN   A   L  M ++G+
Sbjct: 925 TVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGW 973



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 13/355 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++PD+  Y+ +I +  +         +  +  + G+ PDV  YNSLI+G  +   +  +
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680

Query: 97  LDLLDEMLEMGIPPDVWSYNSLM----HCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
             L DEML  GI P++  YN+L+    +C  + G   EA ++F +MI   ++P    + I
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINDYGYC--KSGNLTEAFKLFDEMISKGISPDGYIYCI 738

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++G  K    + AL +F   Q+   V  L  +N LI   CK G++  AR +  ++ D  
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 797

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN +TYT ++    +    +   ++   M+ +    +   Y +++ ++ +IG   +  
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              + M   G+  D ++Y  + + YCKEGK   A  LL++   +G + +      LI  L
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 917

Query: 333 CKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVDRLG--KDGKIDHAINVFESME 384
           CK   I      LE ++++G +  +L +  C    LG  K G  D A  V   M+
Sbjct: 918 CKEKQISTV---LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 969



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 29/275 (10%)

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L +Y+IL   LC +G +  A  +L++L  +   P                     LEIL 
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPP---------------------LEILD 158

Query: 242 AMKRKGYTFDGFG---YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           ++ R    F G     +   I  F  +G L EA+      +++G    ++  N L+    
Sbjct: 159 SLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLL 218

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K   +   + +   M +     D YT+T +I   CK G++   ++ L  M K     NL 
Sbjct: 219 KANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLF 277

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN  +  L + G +D A+ V + M  K    D  TY+ +V   CK KR   A  +  S 
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             SG+   +    A++DG    G   EA +I+ ++
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 2/219 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G LS    N  + +FCK  ++ +A  +  D +   + P++VTY +LIDAY +    +   
Sbjct: 765 GSLSA--FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 822

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M    I P+ +TY SL+    +       + L  +M   GI  D  +Y  +    
Sbjct: 823 QLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAY 882

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + GK  EA ++    +   +      F+ ++  LCK +     L +   + K       
Sbjct: 883 CKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSS 942

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            T N L+ G  K+G    A  +L  +   G  P +++ T
Sbjct: 943 KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 203/437 (46%), Gaps = 39/437 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  R+++A+ I+    R    P+  TY  LI  +C+  + D  + + +RM 
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN------------- 116
           + G  P+ VTY++LI G      L  ++D+L+EM++ GI P V++Y              
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324

Query: 117 ----------------------SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
                                 +L+  L + GK + A  ++  M+   L P T T+N ++
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N LC     + A  +F+ +  HG +P   TYN +IK  C  G ++ A  I  ++  +G +
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN ITY T++    +       + +L  MK  G   D + Y  +I+ F + G+L+ AT  
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M+  G+  + V+Y  +I+ Y    K++ A  L  +M + G      T+ ++I G  K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----T 390
             +I  A      M K G   N+  Y   +D L ++G+   A  +F  ME ++ F    T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 391 YSSMVHNLCKAKRLPSA 407
           YSS+++ LC+  R   A
Sbjct: 625 YSSLIYGLCQEGRAEDA 641



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 187/380 (49%), Gaps = 2/380 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   C   R E A  I    +  G LP   TYN +I  +C          I 
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M +AG SP+V+TYN+LI G  +   L+ ++ LL+ M   G+ PD W+Y  L+    + 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK + A  +F  M+   ++P   T+  +++G       D+AL +F  + + G +P   TY
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N++I G  K   +  A     ++   G  PN ITYT+ +    RN +  L  +I   M++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           + Y  + + Y ++I    + GR ++A  Y  + ++   G + ++ +Y TL+   C EG+ 
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L+  M+K+G +  +  +  L+ G CK   ++ A      M+ +GF  +L  Y  +
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKAL 735

Query: 364 VDRLGKDGKIDHAINVFESM 383
           +  L K+  I+ A  +F++M
Sbjct: 736 ICALCKENFIEEAQCIFQTM 755



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 181/384 (47%), Gaps = 2/384 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST+  N  +  FC    ++KA  I    ++ G  P+V+TYN LI  YC+  + +    +L
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+ PD  TY  LI+G +R   L  +  L   M+E GI P+  +Y +++   F L
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            K D+A  +F  M+     P + T+N+M++G  K      A      + K G +P ++TY
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGL-EILSAM 243
              I GLC+ GR   A  I  E+    + PN  TY++ I   C   R     +  +L+ +
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +   Y T++      GR  EA   +  M   G+Q     Y  L+   CK  K+
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E+A  +   M+  GF+     +  LI  LCK   I+ A+   + M +  ++S+   +  +
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVL 770

Query: 364 VDRLGKDGKIDHAINVFESMEVKD 387
           +D L K+G+ D  + +   ME ++
Sbjct: 771 LDGLLKEGETDLCLKLLHVMESRN 794



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 22/388 (5%)

Query: 54  QFVS-----FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
           QF+S     +D GYT+              ++ +L+    +  ++  + D+  +ML  GI
Sbjct: 152 QFLSEINSKYDFGYTL-------------CSFTTLLIQLGKFDMVDLARDMYIKMLNSGI 198

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            P + ++N++++ L + G+  EA  +   +   D  P   T+  ++ G C+N   D A  
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           MF  + K G  P  VTY+ LI GLC  GRL  A  +L+E+   G  P   TYT  +    
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
                   +E+L  MK++G   +   +  +I+   + G+ + A     +M+ DG+    V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YN LIN  C EG+ E A+ +   M   G      T+  +I   C  G+I+ A +  + M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
            K G   N+  YN ++    K G +++A+ + E M+      D++TY+ ++    +  +L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDG 432
             A+ L    ++ G+        A++DG
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDG 526



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 190/441 (43%), Gaps = 39/441 (8%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN---------------------- 81
           ++  L+    +F   D    +  +M  +GI P ++T+N                      
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 82  -------------SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
                        SLI G  RN  L  +  + D M++ G  P+  +Y++L++ L   G+ 
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  + ++M+   + P   T+ I L  LC    +  A+ +   ++K G VP + T+  L
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GL + G+   A  +  ++   G  P  +TY  ++       +++    I   M   G 
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  +I  F  +G +++A    ++M+  G   ++++YNTLI  YCK+G L  A  
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL+ M+  G + D +T+T LI G  + G ++ A      M + G   N   Y  I+D   
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 369 KDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
              K+D A+ +F    ES  +  S TY+ M+    K   +  A       +K G+     
Sbjct: 529 NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
              + +DGL  +G    A KI
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKI 609



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 9/285 (3%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S++  N+ +  F K N + +AE      ++ G+LP+V+TY   ID  C+       + I 
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCS--LDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + M +    P++ TY+SLI G  +      +   +LL  +   G  P+V +Y +L+  L 
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+  EA+++   M    L P    +  +L G CKN   ++AL +F  +   GF   L 
Sbjct: 671 GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS 730

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y  LI  LCK   +  A+ I + + +     + + +T ++    +  +  L L++L  M
Sbjct: 731 DYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVM 790

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           + +  T +          +V + R   A D   ++     QL IV
Sbjct: 791 ESRNCTLN-------FQTYVMLARELSALDCAIKIPQISQQLGIV 828


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 217/442 (49%), Gaps = 10/442 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LN  +   C  NR + A  ++   +  LG  PDV +YN LI   C          +L  M
Sbjct: 129 LNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHM 188

Query: 69  REAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
              G    SP+VV+YN++I G  +   +  +  L  EM+  G+PPDV +YNSL+  L + 
Sbjct: 189 TADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKA 248

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
              D+A  + Q M    + P T T+NIM+ G C     + A+R+ + +   G  P++VTY
Sbjct: 249 QAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY 308

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++LI+  CK GR   AR +   +   G  PN+  Y  ++             ++L  M R
Sbjct: 309 SLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 368

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G  F+   +  +I A+ K G + +A     +M  +G++ D+VSY+T+I++ CK G++E 
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIV 364
           A    ++M  +G   +  + T LI GLC  G  K    L  E +N+ G   +    N I+
Sbjct: 429 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-GIHPDAIFMNTIM 487

Query: 365 DRLGKDGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D L K+G++  A + F+    + VK D  +Y++++   C   ++  + K L   +  G+R
Sbjct: 488 DNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLR 547

Query: 421 ILKSAQKAVVDGLRHSGCRREA 442
                  ++++G   +G   +A
Sbjct: 548 PDSWTYNSLLNGYFKNGRVEDA 569



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 211/432 (48%), Gaps = 8/432 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-FVSFDAGYTILNR 67
           ++ I +  FC   RL+ A A     ++ G     VT N LI   C    + DA   +  R
Sbjct: 93  IIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRR 152

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDVWSYNSLMHCLFQ 124
           M E G +PDV +YN+LI G         +L+LL  M   G     P+V SYN+++   F+
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ D+A  +F +M+   L P   T+N +++GLCK +  D A+ + + +   G +P+  T
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YNI+I+G C  G+L  A  +LK++  SG  P+ +TY+ +++   +  +      +  +M 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           RKG   +   Y  ++  +   G L +  D ++ M+ DG+  +  ++N LI  Y K G ++
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 392

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A     EM + G   D  +++ +I  LCK G ++ A  H   M   G   N+ ++  ++
Sbjct: 393 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLI 452

Query: 365 DRL---GKDGKIDH-AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L   G+  K++  A  +       D+   ++++ NLCK  R+  A       +  GV+
Sbjct: 453 HGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVK 512

Query: 421 ILKSAQKAVVDG 432
               +   ++DG
Sbjct: 513 PDVVSYNTLIDG 524



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 213/418 (50%), Gaps = 8/418 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR  NI +  +C   +LE+A  ++      G+ PDVVTY++LI  YC+        ++ +
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329

Query: 67  RMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            M   G  P+   Y+ L+ G AT+ +L+    DLLD M+  GIP +  ++N L+    + 
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVR-DLLDLMIRDGIPFEHRAFNILICAYAKH 388

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  D+A   F +M    L P   +++ +++ LCK    ++A+  F  +   G  P ++++
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI GLC  G  +    +  E+ + G  P+AI   TIM    +  +     +    +  
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   Y T+I  +  +G++ E+   +++MV+ G++ D  +YN+L+N Y K G++E 
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIV 364
           A  L  EM ++  +    T  I++ GL +AG I  AR L+++ +++ G    +E YN ++
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR-GTQLRIETYNTVL 627

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             L ++  +D A+ +FE +  K    D  T+S +++ L K  R+  A  L  + +  G
Sbjct: 628 GGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRG 685



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 184/387 (47%), Gaps = 37/387 (9%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +C + K   ++KA     +  + G+ PDVV+Y+ +I   C+    +      N+
Sbjct: 376 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435

Query: 68  MREAGISPDVVTYNSLIAGATR--------------------------NSLLSC------ 95
           M   G+SP+++++ SLI G                             N+++        
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495

Query: 96  ---SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
              + D  D ++ +G+ PDV SYN+L+     +GK DE+ +    M+   L P + T+N 
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +LNG  KN   ++AL ++R + +       +T NI++ GL +AGR+  AR +  ++ D G
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
                 TY T++     N      L +   ++ K +  D   +  VI A +K+GR+ EA 
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                MV  G   D+++Y+ +I  + +EG LE +  L   MEK G   D +   I++  L
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRL 735

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEA 359
            + G+++ A  +L  +++  F  +LEA
Sbjct: 736 LEKGDVRRAGTYLTKIDEKNF--SLEA 760



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 175/351 (49%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           IR G+  +   +N+LI AY +  + D   T    MR+ G+ PDVV+Y+++I    +   +
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M+  G+ P++ S+ SL+H L  +G+  +   +  +MI   + P     N +
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK      A   F  +   G  P++V+YN LI G C  G++  +   L  +   G 
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P++ TY +++   F+N + +  L +   M RK   F       ++    + GR+  A +
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE 606

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV  G QL I +YNT++   C+   ++ A  + +++  + FE D  T +I+I+ L 
Sbjct: 607 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALL 666

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           K G I  A+     M   G   ++  Y+ ++    ++G ++ + N+F SME
Sbjct: 667 KVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 149/313 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C     +K E +  + I  G+ PD +  N ++D  C+           + +   G+ PD
Sbjct: 455 LCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPD 514

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN+LI G      +  S+  LD M+ +G+ PD W+YNSL++  F+ G+ ++A  +++
Sbjct: 515 VVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYR 574

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D+  C  T NIML+GL +      A  ++  +   G    + TYN ++ GLC+  
Sbjct: 575 EMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENS 634

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  + ++L       +  T++ ++    +  +      + SAM  +G   D   Y 
Sbjct: 635 CVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYS 694

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I + ++ G L+E+ +    M  +G   D    N ++    ++G +  A   L +++++
Sbjct: 695 LMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754

Query: 317 GFECDKYTHTILI 329
            F  +  T  +LI
Sbjct: 755 NFSLEASTAALLI 767



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 15/339 (4%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE-------ANRVFQDMICGDLTPCTA 148
           +L+L DE+L    P  V ++NS++  + +             A  +F  M+   +    A
Sbjct: 33  ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAA 92

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKE 207
              I++   C     D A   F    K G+  + VT N LIKGLC   R   A   + + 
Sbjct: 93  IIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRR 152

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY---TFDGFGYCTVIAAFVK 264
           + + G+ P+  +Y  ++K     +K +  LE+L  M   G    + +   Y TVI  F K
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G + +A     +M+  G+  D+V+YN+LI+  CK   ++ A  +L  M  +G   D  T
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           + I+I G C  G ++ A   L+ M+  G   ++  Y+ ++    K G+   A +VF+SM 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            K    +S  Y  ++H       L     LL   ++ G+
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 106/224 (47%), Gaps = 1/224 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R+E A A+  +  R  V    +T N+++    Q     A   +  +M + G    
Sbjct: 560 YFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLR 619

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN+++ G   NS +  +L + +++       DV +++ +++ L ++G+ DEA  +F 
Sbjct: 620 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFS 679

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   T+++M+    +    + +  +F  ++K+G   +    NI+++ L + G
Sbjct: 680 AMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKG 739

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +R A   L ++ +   +  A T   ++      +KY+  ++ L
Sbjct: 740 DVRRAGTYLTKIDEKNFSLEASTAALLIPIV-SEKKYQKEVKFL 782


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 212/435 (48%), Gaps = 7/435 (1%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            C A R+++A  I++  +   G  PDVV YN +I+ + +    +  Y +   M + GI P
Sbjct: 135 LCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPP 194

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY ++I G  +  ++  +  +  +M++ G+ PD  +YN L+H     GK  E  ++ 
Sbjct: 195 NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQML 254

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M    L P   T+ ++L+ LCKN     A   F  + + G  P++  Y IL+ G    
Sbjct: 255 EEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATK 314

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY-KLGLEILSAMKRKGYTFDGFG 254
           G L      L  +  +G +PN   +  IM C +  +   +  + I + M+++G + D   
Sbjct: 315 GALSEMHSFLDLMVGNGVSPNRRIF-NIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS 373

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           +  +I A  K+GR+ +A     QM+ +GV  +I  +++L+   C  GK E A  L  E+ 
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            QG   D      L+  LC  G +  A+  ++ M ++G   N+ +YN +V      G+ID
Sbjct: 434 DQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRID 493

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  + + M       + FTY+ ++   CKA+R+  A  L    L  GV  + +    ++
Sbjct: 494 EAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553

Query: 431 DGLRHSGCRREAKKI 445
            GL  +G   EA ++
Sbjct: 554 HGLFQTGRFSEANEL 568



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 188/399 (47%), Gaps = 4/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  +++A+ +    I  GV PD  TYN LI  Y     +     +L  M   G+ PD
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY  L+    +N     +    D M   GI PDV  Y  L+H     G   E +    
Sbjct: 266 CITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLD 325

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++P    FNIM     K    + A+ +F  +++ G  P++V++  LI  LCK G
Sbjct: 326 LMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLG 385

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A     ++ + G  PN   +++++       K++   E+   +  +G   D   + 
Sbjct: 386 RVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFN 445

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++      GR+ EA   ++ M+  GV+ +++SYNTL+  +C  G+++ A  LLD M   
Sbjct: 446 TLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN 505

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +++T+TIL+ G CKA  +  A      M   G    +  YN I+  L + G+   A
Sbjct: 506 GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEA 565

Query: 377 ----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
               +N+  S    D +TY+ +++ LCK   +  A K+ 
Sbjct: 566 NELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMF 604



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 199/428 (46%), Gaps = 10/428 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R  +A        R G+ PDV  Y +L+  Y    +    ++ L+ M   G+SP+
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              +N +     + +++  ++ + ++M + G+ PDV S+ +L+  L +LG+ D+A   F 
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   +TP    F+ ++ GLC     + A  +F  +   G   + V +N L+  LC  G
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A+ ++  +   G  PN I+Y T++       +     ++L  M   G   + F Y 
Sbjct: 456 RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYT 515

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  + K  R+ +A     +M+  GV   + +YNT+++   + G+   A  L   M   
Sbjct: 516 ILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINS 575

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKI 373
             +CD YT+ I+++GLCK   +  A ++     +K   D  L++  +N ++  L K G+ 
Sbjct: 576 RTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK---DPQLDSVTFNIMIGALLKGGRK 632

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A+++F ++     V D  TY  +  NL +   L     L  +  KSG         A+
Sbjct: 633 EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692

Query: 430 VDGLRHSG 437
           V  L H G
Sbjct: 693 VRRLLHRG 700



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 167/369 (45%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+ NI  C + K   +E+A  I     + G+ PDVV++  LIDA C+    D      N+
Sbjct: 337 RIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQ 396

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++P++  ++SL+ G         + +L  E+L+ GI  D   +N+LM  L   G+
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA R+   MI   + P   ++N ++ G C     D A ++   +  +G  P   TY I
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L++G CKA R+  A  + +E+   G  P   TY TI+   F+  ++    E+   M    
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR 576

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  ++    K   + EA     ++ +   QLD V++N +I    K G+ E A 
Sbjct: 577 TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAM 636

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G   D  T+ ++ + L + G++         M K G   N    N +V RL
Sbjct: 637 DLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRL 696

Query: 368 GKDGKIDHA 376
              G I  A
Sbjct: 697 LHRGDISRA 705



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 143/291 (49%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  +C  C   R+ +A+ +I   IR+GV P+V++YN L+  +C     D    +L+ M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ P+  TY  L+ G  +   +  +  L  EML  G+ P V +YN+++H LFQ G+ 
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EAN ++ +MI         T+NI+LNGLCKN + D A +MFR L       + VT+NI+
Sbjct: 563 SEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K GR   A  +   +   G  P+ +TY  I +             + SAM++ G 
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGT 682

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +      ++   +  G +  A  Y+ ++      L+  + + LI+LY +
Sbjct: 683 APNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 191/424 (45%), Gaps = 40/424 (9%)

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLS--------------------------- 94
           +T + R   + ++P+  TY+ LI    R   L                            
Sbjct: 75  FTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKG 134

Query: 95  -CSLDLLDE--------MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
            C    +DE        M E G PPDV +YN++++  F+ G+ ++A  +F +M+   + P
Sbjct: 135 LCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPP 194

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              T+  +++GLCK +  D A  +F+ +   G  P+  TYN LI G    G+ +    +L
Sbjct: 195 NVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQML 254

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           +E+   G  P+ ITY  ++    +N + +       +M RKG   D   Y  ++  +   
Sbjct: 255 EEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATK 314

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G L E   +++ MV +GV  +   +N +   Y K+  +E A  + ++M +QG   D  + 
Sbjct: 315 GALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSF 374

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
             LID LCK G +  A L    M   G   N+  ++ +V  L   GK + A  +F  +  
Sbjct: 375 GALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD 434

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           +    D+  +++++ NLC   R+  A +L+   ++ GVR    +   +V G   +G   E
Sbjct: 435 QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDE 494

Query: 442 AKKI 445
           A K+
Sbjct: 495 AAKL 498



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 10/325 (3%)

Query: 83  LIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV---FQD 137
           +IA   R+  L    +L L DE+L    P  V ++N L+  + + G    + RV   F  
Sbjct: 18  VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR 77

Query: 138 MI---CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           M       + P   T++I++   C+    ++    F  + K G+   ++  + L+KGLC 
Sbjct: 78  MARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137

Query: 195 AGRLRTARWI-LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           A R+  A  I L  + + G  P+ + Y T++   FR  + +    +   M  +G   +  
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y TVI    K   +  A    +QM+  GV+ D  +YN LI+ Y   GK +    +L+EM
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G E D  T+ +L+D LCK G  + ARL  + M + G   ++  Y  ++      G +
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 374 DHAINVFESMEVKDSFTYSSMVHNL 398
              ++ F  + V +  + +  + N+
Sbjct: 318 SE-MHSFLDLMVGNGVSPNRRIFNI 341


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 181/357 (50%), Gaps = 4/357 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ +A  I  + I  G+ P++VTYN LI   C+   +    T++N M ++ I PD
Sbjct: 160 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 219

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           V T N+++    +  +++ + D++D M+  G+ P+V +YN+LM  HCL    + D A +V
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL--RNEVDVAVKV 277

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F  M+  D      ++N ++NG CK +  D A+ +F  + +    P  VTYN LI GLC 
Sbjct: 278 FDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH 337

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL+ A  +  E+   G  P+ +TY T+     +NR     + +L A++   +  D   
Sbjct: 338 VGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++    + G L++A D    + + G+Q ++ +YN +I+  CK+G L  A  L  EM 
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 457

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           K G   +  T+ ++  G  +          LE M   GF  ++     +V  L  DG
Sbjct: 458 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 201/443 (45%), Gaps = 4/443 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L I + + C  NR++ A + +   ++LG  PD  T+  LI   C          + ++M 
Sbjct: 83  LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+VVTY +LI G  ++  ++ + ++  EM+  GI P++ +YNSL+H L +L +  
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               +  +M+   + P   T N +++ LCK      A  +   +   G  P +VTYN L+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C    +  A  +   +       N I+Y T++    + +     + +   M R+  T
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I     +GRL++A     +MV  G   D+V+Y TL +  CK   L+ A  L
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  +E   ++ D   +T ++DG+C+AG ++ AR     ++  G   N+  YN ++  L K
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 442

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A  +F  M       +  TY+ +     +        +LL   L  G  +  S 
Sbjct: 443 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 502

Query: 426 QKAVVDGLRHSGCRREAKKIQSK 448
              +V  L   G  +  K+I  K
Sbjct: 503 TTLLVGMLSDDGLDQSVKQILCK 525



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 174/362 (48%), Gaps = 13/362 (3%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T N+LI+++C        +++L ++ + G  PDVVTY +L+ G         
Sbjct: 610 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG--------- 660

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
               L +M+  GI PD+++YNSL+H L  L +      +  +M+   + P    F+ +++
Sbjct: 661 ----LCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 716

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK      A  +   + K G  P++VTY  L+ G C    +  A  +   +   G  P
Sbjct: 717 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 776

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  +Y  ++    + ++    + +L  M  +G   D   Y T+I     +GRL+ A    
Sbjct: 777 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 836

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +MV  G   D+V+Y  L++  CK   L  A +LL  +E    + D   + I IDG+C+A
Sbjct: 837 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 896

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
           G ++ AR     ++  G   ++  YN ++  L K G +D A  +F  M+  D ++ S+  
Sbjct: 897 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSS 956

Query: 396 HN 397
            N
Sbjct: 957 RN 958



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 197/388 (50%), Gaps = 6/388 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T  ++I++ C     D  ++ L ++ + G  PD  T+ +LI G      +  
Sbjct: 74  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 133

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  P+V +Y +L++ L +  +  EA  +F +MI   ++P   T+N +++
Sbjct: 134 ALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 193

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK     +   +   +     +P++ T N ++  LCK G +  A  ++  +   G  P
Sbjct: 194 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 253

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           N +TY  +M   C RN +  + +++   M  K    +   Y T+I  + KI  + +A   
Sbjct: 254 NVVTYNALMDGHCLRN-EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 312

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E+M    +  + V+YNTLI+  C  G+L+ A  L  EM  +G   D  T+  L D LCK
Sbjct: 313 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 372

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
             ++  A   L+ +    +D +++ Y  I+D + + G+++ A ++F ++  K    + +T
Sbjct: 373 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 432

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           Y+ M+H LCK   L  ASKL     K+G
Sbjct: 433 YNIMIHGLCKQGLLAEASKLFSEMNKNG 460



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 26/331 (7%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTY----------------------NM 47
           LNI + +FC   RL  A +++   ++LG  PDVVTY                      N 
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNS 678

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
           LI A C    +    T+LN M  + I P+VV +++++    +  +++ + D++D M++ G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738

Query: 108 IPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           + PDV +Y +LM  HCL    + DEA +VF  M+     P   ++NI++NG C+ +  D 
Sbjct: 739 VEPDVVTYTALMDGHCL--RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+ +   +   G + + VTYN LI GLC  GRL+ A  +  E+  SG  P+ +TY  ++ 
Sbjct: 797 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 856

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +N      + +L A++      D   Y   I    + G L+ A D    + + G+Q 
Sbjct: 857 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 916

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           D+ +YN +I+  CK G L+ A  L  +M++ 
Sbjct: 917 DVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 4/410 (0%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           ++N        F + D   +  NRM      P  V +N L+    +    S  L L  +M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GIPPDV++   +++ L  L + D A      ++     P   TF  ++ GLC     
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  +   GF P +VTY  LI GLCK  ++  A  I  E+   G +PN +TY ++
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  ++K    +++ M       D F   TV+ A  K G + EA D ++ M+  GV
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V+YN L++ +C   +++ A  + D M  +    +  ++  LI+G CK  ++  A  
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
             E M++     N   YN ++  L   G++  AI++F  M    ++ D  TY ++   LC
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           K + L  A  LL +   S           ++DG+  +G   +A+ + S +
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 195/452 (43%), Gaps = 63/452 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A  LE A  +  +    G+ P+V TYN++I   C+         + + M + G SP+
Sbjct: 405 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 464

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG---------- 126
             TYN +  G  RN+    +++LL+EML  G   DV +   L+  L   G          
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILC 524

Query: 127 KP------------------------------------DEANRVFQDMICGDLTPCTATF 150
           KP                                    D+A   F  M+     P T  F
Sbjct: 525 KPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDF 584

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
             +L  + K ++    L +   +   G  P++ T NILI   C   RL  A  +L +L  
Sbjct: 585 TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLK 644

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ +TY T+M               L  M  KG + D F Y ++I A   +   K 
Sbjct: 645 LGFQPDVVTYGTLMNG-------------LCKMITKGISPDIFTYNSLIHALCNLCEWKH 691

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
            T  + +MV   +  ++V ++T+++  CKEG +  A+ ++D M K+G E D  T+T L+D
Sbjct: 692 VTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 751

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G C    +  A    + M   G   N+ +YN +++   +  ++D A+ + E M ++    
Sbjct: 752 GHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIA 811

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D+ TY++++H LC   RL  A  L    + SG
Sbjct: 812 DTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 190/396 (47%), Gaps = 19/396 (4%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L+ A +     + +   P  V +  L+ +  +   +    ++  +M   GI PDV T 
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI        L  +  +L ++L++G  PDV +Y +LM+ L +             MI 
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MIT 666

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
             ++P   T+N +++ LC      +   +   +     +P +V ++ ++  LCK G +  
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726

Query: 201 ARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
           A  ++  +   G  P+ +TYT +M   C R+   +  +++   M  KG   +   Y  +I
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDE-AVKVFDTMVHKGCVPNVRSYNILI 785

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
             + +I R+ +A   +EQM   G+  D V+YNTLI+  C  G+L+ A  L  EM   G  
Sbjct: 786 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 845

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+ IL+D LCK  ++  A + L+ +     D+++  YN  +D + + G+++ A ++
Sbjct: 846 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 905

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           F ++  K    D  TY+ M+H LCK   L  A+KL 
Sbjct: 906 FSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 941



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 206/517 (39%), Gaps = 106/517 (20%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V   CK   + +A  ++   I  GV P+VVTYN L+D +C     D    + + M 
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                 +V++YN+LI G  +   +  ++ L +EM    + P+  +YN+L+H L  +G+  
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM-------------------- 169
           +A  +F +M+     P   T+  + + LCKNR+ D A+ +                    
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402

Query: 170 ---------------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                          F  L   G  P + TYNI+I GLCK G L  A  +  E+  +G +
Sbjct: 403 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TY  I +   RN +    +E+L  M  +G++ D      V    + +G L +  D 
Sbjct: 463 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD------VSTTTLLVGMLSD--DG 514

Query: 275 MEQMV------------TDGVQL---------------------------DIVSYNTLIN 295
           ++Q V              G Q+                            + S+N +++
Sbjct: 515 LDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLH 574

Query: 296 LYCKEGKLEAAYLLLD---------------EMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           ++     ++   LL                 +M+  G   D YT  ILI+  C    +  
Sbjct: 575 MHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGY 634

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCK 400
           A   L  + K+GF  ++  Y  +++ L K   I   I+        D FTY+S++H LC 
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCK--MITKGIS-------PDIFTYNSLIHALCN 685

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                  + LL   + S +         VVD L   G
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 6/343 (1%)

Query: 106 MGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           + +PP   S  +N+           DEA   F  M+     P T  FN +L  + K ++ 
Sbjct: 2   LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 61

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              L + R +   G  P++ T  I+I  LC   R+  A   L ++   GH P+A T+TT+
Sbjct: 62  STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL 121

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           ++      K    L +   M  +G+  +   Y T+I    K  ++ EA +   +M+T G+
Sbjct: 122 IRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGI 181

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             +IV+YN+LI+  CK  + +    L++EM       D +T   ++D LCK G +  A  
Sbjct: 182 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 241

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLC 399
            ++ M   G + N+  YN ++D      ++D A+ VF++M  KD      +Y+++++  C
Sbjct: 242 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 301

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           K + +  A  L     +  +         ++ GL H G  ++A
Sbjct: 302 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  NI +  +C+  R++KA  ++      G++ D VTYN LI   C          + 
Sbjct: 777 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 836

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M  +G  PD+VTY  L+    +N  L+ ++ LL  +    +  D+  YN  +  + + 
Sbjct: 837 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 896

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           G+ + A  +F ++    L P   T+NIM++GLCK    D A ++FR + ++
Sbjct: 897 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 68/133 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   RL+ A A+  + +  G +PD+VTY +L+D  C+         +L  +  
Sbjct: 817 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 876

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + +  D++ YN  I G  R   L  + DL   +   G+ PDV +YN ++H L + G  DE
Sbjct: 877 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 936

Query: 131 ANRVFQDMICGDL 143
           AN++F+ M   D+
Sbjct: 937 ANKLFRKMDENDI 949


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 219/423 (51%), Gaps = 10/423 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD   YN +I  +C+   FDA   ++ RM+  G SPDVVTYN LI        L  +L +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           +D++LE    P V +Y  L+      G  D+A R+  +M+   L P   T+N+++ G+CK
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A      L      P L  YN+L+KGL   GR      ++ ++   G  PN +T
Sbjct: 264 RGLVDRAFEFVSNLNT---TPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    R+ K    +++L  MK KG   D + Y  +I+AF K G++  A  +++ M+
Sbjct: 321 YSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMI 380

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
           + G   DIV+YNT++   CK+G+ + A  +  ++E+ G   +  ++  +   L  +G+ I
Sbjct: 381 SAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKI 440

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 394
           +   + LE ++  G D +   YN ++  L +DG +D AI +   ME  +      +Y+ +
Sbjct: 441 RALTMILEMLSN-GVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIV 499

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI-QSKIRMAK 453
           +  LCKA R+  A ++L   + +G +  ++    +V+G+ ++G R  A ++ +S + M  
Sbjct: 500 LLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNA 559

Query: 454 ISH 456
           IS 
Sbjct: 560 ISQ 562



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 195/414 (47%), Gaps = 32/414 (7%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           +G   +   N  +  FC+++R + A  +I+     G  PDVVTYN+LI + C     D  
Sbjct: 141 YGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLA 200

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +++++ E   +P V+TY  LI     +  +  ++ LLDEM+  G+ PD+++YN ++  
Sbjct: 201 LKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRG 260

Query: 122 LFQLGKPDEA--------------------------------NRVFQDMICGDLTPCTAT 149
           + + G  D A                                 R+  DMI     P   T
Sbjct: 261 MCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           ++++++ LC++     A+ + R +++ G  P+   Y+ LI   CK G++  A   + ++ 
Sbjct: 321 YSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMI 380

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            +G  P+ + Y TIM    +  +    L I   ++  G   +   Y T+  A    G   
Sbjct: 381 SAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKI 440

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A   + +M+++GV  D ++YN+LI+  C++G ++ A  LL +ME+  ++    ++ I++
Sbjct: 441 RALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVL 500

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            GLCKA  I  A   L  M   G   N   Y  +V+ +G  G   +A+ + +S+
Sbjct: 501 LGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSL 554



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 11/202 (5%)

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +++ Y F    +   +    K G+  EA  ++EQMV  G + D++    LI       + 
Sbjct: 69  QQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRT 128

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  +++ +E+ G + D + +  +I G C++     A   +  M   GF  ++  YN +
Sbjct: 129 EKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNIL 187

Query: 364 VDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +  L   GK+D A+ V + + ++D+      TY+ ++        +  A +LL   +  G
Sbjct: 188 IGSLCARGKLDLALKVMDQL-LEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG 246

Query: 419 VRILKSAQKAVVDGLRHSGCRR 440
           ++        +V G+    C+R
Sbjct: 247 LQPDMYTYNVIVRGM----CKR 264



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/96 (21%), Positives = 45/96 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C+   +++A  +++D  R    P V++YN+++   C+         +L  M +
Sbjct: 462 NSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVD 521

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
            G  P+  TY  L+ G       S +++L   ++ M
Sbjct: 522 NGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSM 557


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 214/443 (48%), Gaps = 8/443 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +L +A  +++D    G+ P+  T+N+L+  YC+         +++ M  
Sbjct: 87  NTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMAR 146

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TY +LI G  ++  +  +  L DEM  + + P V +YN L++  F+     +
Sbjct: 147 NNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLK 206

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M    + P   T+N+++    K    DNA    R +++ GF P+ VT+N L  
Sbjct: 207 GFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSN 266

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAGRL  A  ++ E+   G   N++T  TI+      RK     ++LS+  ++GY  
Sbjct: 267 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 326

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  + K+G+    +   ++M    +   I++Y T+I   C+ GK + +    
Sbjct: 327 DEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKC 382

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ + G   D+ T+  +I G C+ G +  A      M K  F  +L   N +V  L  +
Sbjct: 383 NELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTE 442

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A+ +F++   K    D+ T+++++  LC+  R   A  LL    +  +       
Sbjct: 443 GMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTH 502

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++  L  +G  +EA++  S I
Sbjct: 503 NAILSALADAGRMKEAEEFMSGI 525



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 205/418 (49%), Gaps = 3/418 (0%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILNRMREAGISPDVVTYNSLIAGATRNS 91
           RL + P+++T N LI A  ++ S  + Y    I + + + G+  +  T+N LI G    +
Sbjct: 3   RLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIEN 62

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            LS ++ L+ +M      PD  SYN+++  L + GK +EA  +  DM    L P   TFN
Sbjct: 63  KLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFN 122

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I+++G CK  +   A  +   + ++  +P++ TY  LI GLCK G++  A  +  E+ + 
Sbjct: 123 ILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENL 182

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
              P+ +TY  ++  CF       G E++  M+ KG   +   Y  V+  +VK G++  A
Sbjct: 183 KLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 242

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            + + +M   G   D V++NTL N YCK G+L  A+ ++DEM ++G + +  T   ++  
Sbjct: 243 GNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 302

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTY 391
           LC    +  A   L   +K G+  +  +Y  ++    K GK      + E   +    TY
Sbjct: 303 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITY 362

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +M+  LC++ +   +       L+SG+   ++    ++ G    G   +A   ++K+
Sbjct: 363 GTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 190/386 (49%), Gaps = 8/386 (2%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           ++AI  D I+LGV  +  T+N+LI   C          ++ +M+     PD V+YN+++ 
Sbjct: 32  SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILD 91

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
              +   L+ + DLL +M   G+ P+  ++N L+    +LG   EA  V   M   ++ P
Sbjct: 92  VLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLP 151

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              T+  ++ GLCK+   D A R+   ++    +P +VTYN+LI G  +         ++
Sbjct: 152 DVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELI 211

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
            E+   G  PNA+TY  ++K   +  K       L  M+  G++ D   + T+   + K 
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKA 271

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GRL EA   M++M   G++++ V+ NT+++  C E KL+ AY LL    K+G+  D+ ++
Sbjct: 272 GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSY 331

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFE 381
             LI G  K G         + M +     ++  Y  ++  L + GK D +I+    + E
Sbjct: 332 GTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLE 387

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSA 407
           S  V D  TY++++   C+  ++  A
Sbjct: 388 SGLVPDQTTYNTIILGYCREGQVDKA 413



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 205/448 (45%), Gaps = 39/448 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++++A  +  +   L +LP VVTYNMLI+   +  S   G+ +++ M   G+ P+
Sbjct: 163 LCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPN 222

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN ++    +   +  + + L +M E G  PD  ++N+L +   + G+  EA R+  
Sbjct: 223 AVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMD 282

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------------ 178
           +M    L   + T N +L+ LC  R  D+A ++     K G+                  
Sbjct: 283 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG 342

Query: 179 -------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
                        +P ++TY  +I GLC++G+   +     EL +SG  P+  TY TI+ 
Sbjct: 343 KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIIL 402

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              R  +        + M +K +  D F    ++      G L +A    +  ++ G  +
Sbjct: 403 GYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAI 462

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D V++NT+I+  C+EG+ E A+ LL EME++    D YTH  ++  L  AG +K A    
Sbjct: 463 DAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAE--- 519

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLP 405
           E+M+ I     L+     +++     +   + +        +S  +S  ++ LC   +  
Sbjct: 520 EFMSGIVEQGKLQDQTISLNK-----RKTESSSETSQESDPNSVAFSEQINELCTQGKYK 574

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGL 433
            A  ++    + G+ + KS   ++++GL
Sbjct: 575 DAMHMIQESTQKGIILHKSTYISLMEGL 602



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 155/332 (46%), Gaps = 18/332 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+++  LN  + T C   +L+ A  ++    + G   D V+Y  LI  Y     F  G +
Sbjct: 290 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY-----FKVGKS 344

Query: 64  I-LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
              + M+E  I P ++TY ++I G  R+     S+D  +E+LE G+ PD  +YN+++   
Sbjct: 345 XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGY 404

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G+ D+A      M+     P   T NI++ GLC     D AL++F+     G   + 
Sbjct: 405 CREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDA 464

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT+N +I GLC+ GR   A  +L E+ +    P+  T+  I+       + K   E +S 
Sbjct: 465 VTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSG 524

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +  +G   D           + + + K  +       +D    + V+++  IN  C +GK
Sbjct: 525 IVEQGKLQD---------QTISLNKRKTESSSETSQESDP---NSVAFSEQINELCTQGK 572

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + A  ++ E  ++G    K T+  L++GL K
Sbjct: 573 YKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 235/511 (45%), Gaps = 79/511 (15%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GIS 74
            C A R ++A ++++  +  LG +PD  +YN +I + C          +L RM +  G S
Sbjct: 210 LCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCS 269

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PDVV+Y  +I G      +S + +L +EM++ G+ P+V +YNS++H L +    D+A  V
Sbjct: 270 PDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELV 329

Query: 135 FQDMICGDLTPCTATFNIMLNGL-CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + M    + P   T+  M++G  C  R+ + A +MF+ + + G +P++VT+N L+  LC
Sbjct: 330 LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAA-KMFKEMTREGLIPDIVTFNSLMDSLC 388

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIM---------------------------KC 226
           K  R + A  I   +   GH P+ I+Y+ ++                             
Sbjct: 389 KHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSH 448

Query: 227 CFR---NRKYKLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           CF    N   K G     L I + M+ +G + +   Y TVIAA  ++GRL +A + + QM
Sbjct: 449 CFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF-------------------- 318
           ++ G++ + V Y++LI  +C  G L  A  L+ EM  QG                     
Sbjct: 509 ISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGR 568

Query: 319 ----------------ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
                             D +T   LIDG C  G +  A   L+ M   G + ++  Y+ 
Sbjct: 569 VMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYST 628

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++   K G+ID  + +F  M  K     + TYS ++  L +A R  +A K+    ++SG
Sbjct: 629 LINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             +  S    ++ GL  + C  EA  +  K+
Sbjct: 689 TAMSISTYTIILQGLCRNNCTDEAITLFHKL 719



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 215/441 (48%), Gaps = 6/441 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  + + C  +R ++A  +++   +  G  PDVV+Y M+I              + N M 
Sbjct: 240 NTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMV 299

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ P+VVTYNS++    +   +  +  +L +M +  I PD  +Y +++H    LG+  
Sbjct: 300 QKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWK 359

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA ++F++M    L P   TFN +++ LCK++ +  A  +F  +   G  P++++Y+IL+
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G    GR      +   + D+G   ++  +  ++    +       L I + M+ +G +
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y TVIAA  ++GRL +A + + QM++ G++ + V Y++LI  +C  G L  A  L
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539

Query: 310 LDEMEKQGFECDKYT-HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           + EM  QG      T  + +I  LC  G +  A+     +  IG   ++  +N ++D   
Sbjct: 540 VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYC 599

Query: 369 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             GK+D A  V ++M       D  TYS++++   K+ R+     L    L   V+    
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV 659

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               V+DGL  +G    AKK+
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKM 680



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 7/422 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT-ILNRMREAGISPD 76
           C+A R +   A     +R G+  D +  N  +   C     D   + +L+RM E G  PD
Sbjct: 176 CRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPD 235

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             +YN++I      S    +LD+L  M +  G  PDV SY  ++H LF  G+  +A  +F
Sbjct: 236 AFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLF 295

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M+   + P   T+N +++ LCK R  D A  + R +  +   P+ VTY  +I G    
Sbjct: 296 NEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCL 355

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR + A  + KE+   G  P+ +T+ ++M    ++++ K   EI  ++  KG+  D   Y
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++  +   GR  +  +    M  +G+  D   +N LIN + K G ++ A L+  EM  
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRG 475

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           QG   +  T+  +I  LC+ G +  A   L  M  IG   N   Y+ ++      G +  
Sbjct: 476 QGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIK 535

Query: 376 AINVFESME----VKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           A  +   M      + + T +SS++H+LC   R+ +A  +    +  G R       +++
Sbjct: 536 AKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLI 595

Query: 431 DG 432
           DG
Sbjct: 596 DG 597



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 209/472 (44%), Gaps = 40/472 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CKA  ++KAE ++       + PD VTY  +I  Y     +     +   M  
Sbjct: 311 NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR 370

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+VT+NSL+    ++     + ++   +   G  PD+ SY+ L+H     G+  +
Sbjct: 371 EGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVD 430

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            N +F  M    +   +  FNI++N   K    D AL +F  ++  G  P +VTY  +I 
Sbjct: 431 MNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIA 490

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-----KR 245
            LC+ GRL  A   L ++   G  PN + Y ++++    +       E++S M      R
Sbjct: 491 ALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPR 550

Query: 246 KGYTF-------------------------------DGFGYCTVIAAFVKIGRLKEATDY 274
              TF                               D F + ++I  +  +G++ +A   
Sbjct: 551 PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGV 610

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++ MV+ G + D+V+Y+TLIN Y K G+++   +L  EM  +  +    T+++++DGL +
Sbjct: 611 LDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFR 670

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVKDSFT- 390
           AG    A+     M + G   ++  Y  I+  L ++   D AI +F    +M +K     
Sbjct: 671 AGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAI 730

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            ++M+H L K KR   A  L  S   SG+    S    ++  L   G   EA
Sbjct: 731 LNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEA 782



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 143/303 (47%), Gaps = 7/303 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C   R+  A+ +    I +G  PD+ T+N LID YC     D  + +L+ M  AG  P
Sbjct: 562 SLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEP 621

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTY++LI G  ++  +   L L  EML   + P   +Y+ ++  LF+ G+   A ++F
Sbjct: 622 DVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMF 681

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI        +T+ I+L GLC+N  TD A+ +F  L       E+   N +I  L K 
Sbjct: 682 HEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKV 741

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A  +   +  SG  PNA TY  ++    +    +    + S+M++ G        
Sbjct: 742 KRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLL 801

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK-------LEAAYL 308
             +I   ++ G + +A  YM ++    + L+  + + LI+L+  +G+       L A Y 
Sbjct: 802 NDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFLPAKYQ 861

Query: 309 LLD 311
             D
Sbjct: 862 FFD 864



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 1/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +    K   +++A  I  +    GV P+VVTY  +I A C+          L++M 
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKP 128
             G+ P+ V Y+SLI G   +  L  + +L+ EM++ GIP P++  ++S++H L   G+ 
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  VF  +I     P   TFN +++G C     D A  +   +   G  P++VTY+ L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K+GR+     + +E+      P  +TY+ ++   FR  +     ++   M   G 
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  ++    +     EA     ++    ++ +I   NT+I+   K  + E A+ 
Sbjct: 690 AMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHD 749

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   +  T+ ++I  L K G+++ A +    M K G   +    N I+  L 
Sbjct: 750 LFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLL 809

Query: 369 KDGKI 373
           + G+I
Sbjct: 810 QKGEI 814



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 1/349 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++ D   +N+LI+A+ +    D    I   MR  G+SP+VVTY ++IA   R   L+ +
Sbjct: 442 GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA 501

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLN 155
           ++ L +M+ +G+ P+   Y+SL+      G   +A  +  +M+  G   P    F+ +++
Sbjct: 502 MEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIH 561

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC      NA  +F  +   G  P++ T+N LI G C  G++  A  +L  +  +G  P
Sbjct: 562 SLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEP 621

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY+T++   F++ +   GL +   M  K        Y  V+    + GR   A    
Sbjct: 622 DVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMF 681

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  + I +Y  ++   C+    + A  L  ++     + +      +I  L K 
Sbjct: 682 HEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKV 741

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              + A      ++  G   N   Y  ++  L K+G ++ A  +F SME
Sbjct: 742 KRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSME 790



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 158/383 (41%), Gaps = 41/383 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           +P  V +Y  LM C  +  +PD     F  ++   L       N  L  LC  + TD AL
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220

Query: 168 RM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL--------------------- 205
            M    + + G VP+  +YN +IK LC   R + A  +L                     
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280

Query: 206 ---------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                           E+   G  PN +TY +I+    + R       +L  M       
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I  +  +GR KEA    ++M  +G+  DIV++N+L++  CK  + + A  + 
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             +  +G + D  +++IL+ G    G           M   G  ++   +N +++   K 
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A+ +F  M  +    +  TY++++  LC+  RL  A + L   +  G++      
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            +++ G    G   +AK++ S++
Sbjct: 521 HSLIQGFCTHGDLIKAKELVSEM 543



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 116/266 (43%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +C   +++KA  ++   +  G  PDVVTY+ LI+ Y +    D G  +   M 
Sbjct: 591 FNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREML 650

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              + P  VTY+ ++ G  R    S +  +  EM+E G    + +Y  ++  L +    D
Sbjct: 651 CKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTD 710

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  +   +L    A  N M++ L K +  + A  +F  +   G VP   TY ++I
Sbjct: 711 EAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMI 770

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L K G +  A  +   +  +G AP++     I++   +  +       +S +     +
Sbjct: 771 INLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIIS 830

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYM 275
            +      +I+ F   GR +E   ++
Sbjct: 831 LEASTTSLLISLFASKGRYREQIKFL 856



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 104/215 (48%), Gaps = 3/215 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P  VTY++++D   +     A   + + M E+G +  + TY  ++ G  RN+    ++
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L  ++  M +  ++   N+++H L+++ + +EA+ +F  +    L P  +T+ +M+  L
Sbjct: 714 TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINL 773

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            K    + A  MF  ++K G  P     N +I+ L + G +  A + + ++  +  +  A
Sbjct: 774 LKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEA 833

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            T + ++       +Y+  ++ L A   K   FDG
Sbjct: 834 STTSLLISLFASKGRYREQIKFLPA---KYQFFDG 865


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 209/453 (46%), Gaps = 40/453 (8%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDV 77
           A R +   A+  + ++LG+ P +VTYN L+D++ +    D    +L  M  R +G  P+ 
Sbjct: 182 AARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPND 241

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEM-------------------------------LEM 106
           VTYN +I G TR   L  + +L++ M                               LEM
Sbjct: 242 VTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM 301

Query: 107 ---GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI P V +YN+++H L Q G  + A   F +M    L P   T+N +LNG CK    
Sbjct: 302 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 361

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  L++ G  P ++TYNI I G C+ G L  AR + +E+G+ G  PN  TYT +
Sbjct: 362 KEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 421

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           MK         +  E    M  KG   D F Y T I A + +G +  A +  E ++ +G+
Sbjct: 422 MKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGI 481

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V+YN LI+  CK G L+ A  L  +M   G + D  T+T LI   C+ G ++ AR 
Sbjct: 482 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 541

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
               M   G   +   +  I+    + G +  A   F  M  +    +  TY+ ++H LC
Sbjct: 542 IFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 601

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  R   AS      L+ G+   K     ++DG
Sbjct: 602 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDG 634



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 176/366 (48%), Gaps = 39/366 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  L++A  +  D  R G+ P V+TYN+ ID YC+    +    +   M E G  P+
Sbjct: 355 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPN 414

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  L+ G+     L+ + +  DEML  G+ PD ++YN+               R+  
Sbjct: 415 VCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNT---------------RICA 459

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I GD+                      AL +   L   G   + VTYNILI GLCK G
Sbjct: 460 ELILGDIA--------------------RALELREVLMLEGISSDTVTYNILIHGLCKTG 499

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L+ A+ +  ++  +G  P+ ITYT ++         +   +I + M   G       + 
Sbjct: 500 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 559

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A+ + G L  A  +  +M+ +GV+ + ++YN LI+  C+ G+ + A     EM ++
Sbjct: 560 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLER 619

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           G   +KYT+T+LIDG CK GN + A R + E M++ G   +   +  +V   G DG + H
Sbjct: 620 GLVANKYTYTLLIDGNCKVGNWEDAMRFYFE-MHQNGIHPDYLTHKALVK--GFDGHVHH 676

Query: 376 AINVFE 381
            I   +
Sbjct: 677 TIEYLD 682



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 185/424 (43%), Gaps = 40/424 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +   LE+A A +++G+RL       TYN LI            Y +   M  
Sbjct: 245 NVVITGLTRKGDLEEA-AELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMEN 303

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P VVTYN++I G  ++ L+  +     EM  MG+ PDV +YNSL++   + G   E
Sbjct: 304 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKE 363

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F D+    L P   T+NI ++G C+    + A  +   + + G +P + TY IL+K
Sbjct: 364 ALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 423

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G      L  AR    E+   G  P+   Y T +            LE+   +  +G + 
Sbjct: 424 GSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISS 483

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL-------------- 296
           D   Y  +I    K G LK+A +   +MV++G+Q D ++Y  LI+               
Sbjct: 484 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 543

Query: 297 ---------------------YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                                YC+ G L +AY    +M ++G E ++ T+ +LI  LC+ 
Sbjct: 544 NNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 603

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G  + A  H   M + G  +N   Y  ++D   K G  + A+  +  M       D  T+
Sbjct: 604 GRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTH 663

Query: 392 SSMV 395
            ++V
Sbjct: 664 KALV 667



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 93/182 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   L+ A+ + +  +  G+ PD +TY  LI A+C+         I N M  
Sbjct: 489 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 548

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P  VT+  +I    R   L  +     +MLE G+ P+  +YN L+H L ++G+   
Sbjct: 549 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 608

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+  F +M+   L     T+ ++++G CK    ++A+R +  + ++G  P+ +T+  L+K
Sbjct: 609 ASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVK 668

Query: 191 GL 192
           G 
Sbjct: 669 GF 670



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 3/252 (1%)

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F++M    + P     N +L  L      D+   +   + + G  P +VTYN L+    
Sbjct: 156 AFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFL 215

Query: 194 KAGRLRTARWILKELGD--SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           K GR      +LKE+    SG  PN +TY  ++    R    +   E++  M R      
Sbjct: 216 KEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKAS 274

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  +I   +  G +K+  D   +M  +G+   +V+YN +I+   + G +EAA +   
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G   D  T+  L++G CKAGN+K A L    + + G    +  YN  +D   + G
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 372 KIDHAINVFESM 383
            ++ A  + E M
Sbjct: 395 DLEEARILKEEM 406



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 40/232 (17%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           V+ A     R  +     E+M+  G++  IV+YNTL++ + KEG+ +   +LL EME +G
Sbjct: 175 VLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRG 234

Query: 318 FEC--DKYTHTILIDGLCKAGNIKGARLHLEYMN-----------------------KIG 352
             C  +  T+ ++I GL + G+++ A   +E M                        K  
Sbjct: 235 SGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKV 294

Query: 353 FDSNLE-----------AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
           +D  LE            YN ++  L + G ++ A   F  M     + D  TY+S+++ 
Sbjct: 295 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 354

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            CKA  L  A  L     ++G+          +DG    G   EA+ ++ ++
Sbjct: 355 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM 406


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 28/453 (6%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C   +  +L + + I+   I  G  P    +N LI AYC+   +   Y +L +M + 
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQ 124
           G  P  V YN LI G   N  L  SLD+L+       EML+  +  +  + ++L  CL  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCG 457

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK ++A  + ++M+     P T+T++ ++  LC     DNA  +F  ++ +  VP++ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y ILI   CK G L+ AR    E+   G APN +TYT ++    + RK     E+   M 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--------------VTDGVQLD--IV 288
            +G   +   Y  +I    K G++++A     +M              + DG   D  I 
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y  L++  CK  K++ A  LLD M  +G E +   +  LIDG CK G +  A++    M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           ++ G+  N+  Y+ ++DRL KD ++D A+ V   M       +   Y+ M+  LCK  + 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             A +L+    + G         A++DG   +G
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 17/390 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+  C  C A + EKA +II + +  G +PD  TY+ +I   C     D  + +   M+ 
Sbjct: 450 NLARC-LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TY  LI    +  LL  +    DEM+  G  P+V +Y +L+H   +  K   
Sbjct: 509 NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSS 568

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE--------- 181
           AN +F+ M+     P   T+  +++G CK+   + A +++  ++ +  +P+         
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD 628

Query: 182 -------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                  + TY  L+ GLCKA +++ AR +L  +   G  PN I Y  ++    +  K  
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
               + + M  +GY  + + Y ++I    K  RL  A   + +M+ +    +++ Y  +I
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK GK + AY L+  ME++G   +  T+T +IDG  KAG +      +  M   G  
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            N   Y  +++     G +D A  + + M+
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 213/493 (43%), Gaps = 66/493 (13%)

Query: 17  FCKANRLEKAEAII-IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CKA R  +A A+I  +  +L    D V Y  +I   C+   F+     L+RMR +   P
Sbjct: 277 LCKAGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP 332

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY  L+ G  R   L     +L  M+  G  P    +NSL+H   + G    A ++ 
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYT-------------------------------- 163
           + M      P    +NI++ G+C N                                   
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452

Query: 164 ---------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                    + A  + R +   GF+P+  TY+ +I  LC A ++  A  + +E+  +   
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TYT ++    +    +   +    M R G   +   Y  +I A++K  ++  A + 
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG--------FECDK---- 322
            E M+++G   ++V+Y  LI+ +CK G++E A  +   M            F+ D     
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 323 ----YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T+  L+DGLCKA  +K AR  L+ M+  G + N   Y+ ++D   K GK+D A  
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF  M  +    + +TYSS++  L K KRL  A K+L   L++           ++DGL 
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 435 HSGCRREAKKIQS 447
             G   EA ++ S
Sbjct: 753 KVGKTDEAYRLMS 765



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 195/467 (41%), Gaps = 61/467 (13%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------------- 49
           S R+ N  +  +C++     A  ++      G  P  V YN+LI                
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLE 427

Query: 50  ----------DAY---------------CQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
                     DA+               C    F+  Y+I+  M   G  PD  TY+ +I
Sbjct: 428 LAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
                 S +  +  L +EM    + PDV++Y  L+    ++G   +A + F +M+     
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T+  +++   K R   +A  +F  +   G +P +VTY  LI G CK+G++  A  I
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 205 LKELG--------------DSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
              +               D G+   PN  TY  ++    +  K K   ++L  M  +G 
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  F K+G+L EA     +M   G   ++ +Y++LI+   K+ +L+ A  
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L  M +     +   +T +IDGLCK G    A   +  M + G   N+  Y  ++D  G
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K GK+D  + +   M  K    +  TY  ++++ C A  L  A +LL
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 149/310 (48%), Gaps = 16/310 (5%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P++ TY  L+D  C+         +L+ M   G  P+ + Y++LI G  +   L  +  +
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +M E G  P+V++Y+SL+  LF+  + D A +V   M+     P    +  M++GLCK
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              TD A R+   +++ G  P +VTY  +I G  KAG++     +++++G  G APN +T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF-----VKIGRLKEATDY 274
           Y  ++  C          ++L  MK+  +     GY  VI  F     + +G L E    
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE---- 869

Query: 275 MEQMVTDGVQLDIV-SYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDG 331
               + + V + I+ +Y  LI+ +CK G+LE A  L  EM         DK  ++ LI+ 
Sbjct: 870 ----IAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIES 925

Query: 332 LCKAGNIKGA 341
           L  A  +  A
Sbjct: 926 LSLASKVDKA 935



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 44/408 (10%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+LI   C+   ++     L R+++ G  P  +TYN+L+        L  +  +  EM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEA------------NRVFQDMICG------------ 141
            G   D ++    +H L + G+  EA              ++  MI G            
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320

Query: 142 --------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
                      P   T+ I+L G  + R      R+   +   G  P    +N LI   C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG 252
           ++G    A  +LK++GD G  P  + Y  ++     N K    L++L  A K  G   D 
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDA 439

Query: 253 ------FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                      +       G+ ++A   + +M++ G   D  +Y+ +I L C   K++ A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +LL +EM+      D +T+TILID  CK G ++ AR   + M + G   N+  Y  ++  
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
             K  K+  A  +FE M     + +  TY++++   CK+ ++  A ++
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 173/416 (41%), Gaps = 50/416 (12%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI    RN L + +L+ L  + ++G  P   +YN+L+    +  + D A  V ++M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
                   T    ++ LCK      AL +   ++K  F  + V Y  +I GLC+A     
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A   L  +  S   PN +TY  ++  C R R+      ILS M  +G       + ++I 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------------------- 294
           A+ + G    A   +++M   G Q   V YN LI                          
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 295 ------------NL---YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                       NL    C  GK E AY ++ EM  +GF  D  T++ +I  LC A  + 
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 394
            A L  E M       ++  Y  ++D   K G +  A   F+ M V+D       TY+++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM-VRDGCAPNVVTYTAL 556

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +H   KA+++ SA++L    L  G         A++DG   SG   +A +I +++R
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 38/301 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L++A+ +       G  P+V TY+ LID   +    D    +L+RM E   +P+
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ Y  +I G  +      +  L+  M E G  P+V +Y +++    + GK D+   + +
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-----KH---------GF---- 178
            M      P   T+ +++N  C     D+A ++   ++     KH         GF    
Sbjct: 801 QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREF 860

Query: 179 ---------------VPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAITYT 221
                          VP +  Y ILI   CKAGRL  A  + KE+    S  A +   Y+
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYS 920

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQM 278
           ++++      K     E+ + M ++G   +   +  ++   ++I R +EA   +D + QM
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQM 980

Query: 279 V 279
           V
Sbjct: 981 V 981



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y+ L++ L   G  R     L+E+ D            +++ C RN  + + LE L  +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  GY      Y  ++  F++  RL  A     +M   G  +D  +    ++L CK G+ 
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L+   EK+ F+ D   +T +I GLC+A   + A   L  M       N+  Y  +
Sbjct: 284 REALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 411
           +    +  ++     +   M  +  +     ++S++H  C++     A KLL
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 28/453 (6%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C   +  +L + + I+   I  G  P    +N LI AYC+   +   Y +L +M + 
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQ 124
           G  P  V YN LI G   N  L  SLD+L+       EML+  +  +  + ++L  CL  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCG 457

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK ++A  + ++M+     P T+T++ ++  LC     DNA  +F  ++ +  VP++ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y ILI   CK G L+ AR    E+   G APN +TYT ++    + RK     E+   M 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--------------VTDGVQLD--IV 288
            +G   +   Y  +I    K G++++A     +M              + DG   D  I 
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y  L++  CK  K++ A  LLD M  +G E +   +  LIDG CK G +  A++    M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           ++ G+  N+  Y+ ++DRL KD ++D A+ V   M       +   Y+ M+  LCK  + 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             A +L+    + G         A++DG   +G
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 17/390 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+  C  C A + EKA +II + +  G +PD  TY+ +I   C     D  + +   M+ 
Sbjct: 450 NLARC-LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TY  LI    +  LL  +    DEM+  G  P+V +Y +L+H   +  K   
Sbjct: 509 NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSS 568

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE--------- 181
           AN +F+ M+     P   T+  +++G CK+   + A +++  ++ +  +P+         
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD 628

Query: 182 -------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                  + TY  L+ GLCKA +++ AR +L  +   G  PN I Y  ++    +  K  
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
               + + M  +GY  + + Y ++I    K  RL  A   + +M+ +    +++ Y  +I
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK GK + AY L+  ME++G   +  T+T +IDG  KAG +      +  M   G  
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            N   Y  +++     G +D A  + + M+
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 213/493 (43%), Gaps = 66/493 (13%)

Query: 17  FCKANRLEKAEAII-IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CKA R  +A A+I  +  +L    D V Y  +I   C+   F+     L+RMR +   P
Sbjct: 277 LCKAGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP 332

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY  L+ G  R   L     +L  M+  G  P    +NSL+H   + G    A ++ 
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYT-------------------------------- 163
           + M      P    +NI++ G+C N                                   
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452

Query: 164 ---------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                    + A  + R +   GF+P+  TY+ +I  LC A ++  A  + +E+  +   
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TYT ++    +    +   +    M R G   +   Y  +I A++K  ++  A + 
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG--------FECDK---- 322
            E M+++G   ++V+Y  LI+ +CK G++E A  +   M            F+ D     
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 323 ----YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T+  L+DGLCKA  +K AR  L+ M+  G + N   Y+ ++D   K GK+D A  
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF  M  +    + +TYSS++  L K KRL  A K+L   L++           ++DGL 
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 435 HSGCRREAKKIQS 447
             G   EA ++ S
Sbjct: 753 KVGKTDEAYRLMS 765



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 195/467 (41%), Gaps = 61/467 (13%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------------- 49
           S R+ N  +  +C++     A  ++      G  P  V YN+LI                
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLE 427

Query: 50  ----------DAY---------------CQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
                     DA+               C    F+  Y+I+  M   G  PD  TY+ +I
Sbjct: 428 LAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
                 S +  +  L +EM    + PDV++Y  L+    ++G   +A + F +M+     
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T+  +++   K R   +A  +F  +   G +P +VTY  LI G CK+G++  A  I
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 205 LKELG--------------DSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
              +               D G+   PN  TY  ++    +  K K   ++L  M  +G 
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  F K+G+L EA     +M   G   ++ +Y++LI+   K+ +L+ A  
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L  M +     +   +T +IDGLCK G    A   +  M + G   N+  Y  ++D  G
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K GK+D  + +   M  K    +  TY  ++++ C A  L  A +LL
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 44/408 (10%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+LI   C+   ++     L R+++ G  P  +TYN+L+        L  +  +  EM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEA------------NRVFQDMICG------------ 141
            G   D ++    +H L + G+  EA              ++  MI G            
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320

Query: 142 --------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
                      P   T+ I+L G  + R      R+   +   G  P    +N LI   C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG 252
           ++G    A  +LK++GD G  P  + Y  ++     N K    L++L  A K  G   D 
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDA 439

Query: 253 ------FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                      +       G+ ++A   + +M++ G   D  +Y+ +I L C   K++ A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +LL +EM+      D +T+TILID  CK G ++ AR   + M + G   N+  Y  ++  
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
             K  K+  A  +FE M     + +  TY++++   CK+ ++  A ++
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 173/416 (41%), Gaps = 50/416 (12%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI    RN L + +L+ L  + ++G  P   +YN+L+    +  + D A  V ++M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
                   T    ++ LCK      AL +   ++K  F  + V Y  +I GLC+A     
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A   L  +  S   PN +TY  ++  C R R+      ILS M  +G       + ++I 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------------------- 294
           A+ + G    A   +++M   G Q   V YN LI                          
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 295 ------------NL---YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                       NL    C  GK E AY ++ EM  +GF  D  T++ +I  LC A  + 
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 394
            A L  E M       ++  Y  ++D   K G +  A   F+ M V+D       TY+++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM-VRDGCAPNVVTYTAL 556

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +H   KA+++ SA++L    L  G         A++DG   SG   +A +I +++R
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L++A+ +       G  P+V TY+ LID   +    D    +L+RM E   +P+
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ Y  +I G  +      +  L+  M E G  P+V +Y +++    + GK D+   + +
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-----KH---------GF---- 178
            M      P   T+ +++N  C     D+A ++   ++     KH         GF    
Sbjct: 801 QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREF 860

Query: 179 ---------------VPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAITYT 221
                          VP +  Y ILI   CKAGRL  A  + K +    S  A +   Y+
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYS 920

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           ++++      K     E+ + M ++G   +   +  ++   ++I R
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y+ L++ L   G  R     L+E+ D            +++ C RN  + + LE L  +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  GY      Y  ++  F++  RL  A     +M   G  +D  +    ++L CK G+ 
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L+   EK+ F+ D   +T +I GLC+A   + A   L  M       N+  Y  +
Sbjct: 284 REALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 411
           +    +  ++     +   M  +  +     ++S++H  C++     A KLL
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 1/343 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   + +A     +    G+ PDV+TY+ LI  +C        +++LN M
Sbjct: 274 MYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEM 333

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               I+PDV TY  LI    +   L  + +LL  M + G+ P+V +Y++LM     +G+ 
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A ++F  M+  ++ P   ++NIM+NGLCK +  D A+ + R +     VP  VTYN L
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK+GR+ +A  ++KEL   G   + ITYT+++    +N+     + +   MK +G 
Sbjct: 454 IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + + Y  +I    K  RLK A    + ++  G  +D+ +YN +I   CKEG L+ A  
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALA 573

Query: 309 LLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNK 350
           +  +ME  G   D  T  I+I  L  K  N K  +L  E + K
Sbjct: 574 MKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 207/418 (49%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+VT ++LI+ +C        +++L ++ + G  P+ +   +L+ G      +  S
Sbjct: 162 GIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKS 221

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   +  SY +L++ L ++G+   A ++ + +      P    +N +++G
Sbjct: 222 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++  + A   +  +   G  P+++TY+ LI G C AG+L  A  +L E+      P+
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPD 341

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TYT ++    +  K K    +L  M ++G   +   Y T++  +  +G +  A     
Sbjct: 342 VYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV   V   + SYN +IN  CK   ++ A  LL EM  +    +  T+  LIDGLCK+G
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   ++ ++  G  +++  Y  ++D L K+  +D AI +F  M+ +    + +TY+
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++  LCK  RL +A KL    L  G  I       ++ GL   G   EA  ++SK+ 
Sbjct: 522 ALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 185/384 (48%), Gaps = 39/384 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVV YN +ID  C+    +  Y     M   GI PDV+TY++LI G      L  +  L
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSL 329

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM    I PDV++Y  L+  L + GK  EA  +   M    + P   T++ +++G C 
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                NA ++F  + +    P + +YNI+I GLCK   +  A  +L+E+      PN +T
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVT 449

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++                             G C       K GR+  A D M+++ 
Sbjct: 450 YNSLID----------------------------GLC-------KSGRITSALDLMKELH 474

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D+++Y +L++  CK   L+ A  L  +M+++G + +KYT+T LIDGLCK   +K
Sbjct: 475 HRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLK 534

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A+   +++   G   ++  YN ++  L K+G +D A+ +   ME    + D+ T+  ++
Sbjct: 535 NAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIII 594

Query: 396 HNLCKAKRLPSASKLLLSCLKSGV 419
            +L +      A KLL   +  G+
Sbjct: 595 RSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 207/461 (44%), Gaps = 65/461 (14%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P++VT ++LI+           +++L ++ + G  P+ +T  +L+ G TR     C+
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETR-----CA 60

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCL---------------FQLGKPD------EANRVF 135
           + L   + +    P +W  +SL H +               F    P       +A   F
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+    TP    F  +L  L K ++   A+ + + ++  G  P+LVT +ILI   C  
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  +  +L ++   G+ PN I  TT+MK      + K  L     +  +G+  +   Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 256 CTVIAAFVKIGRLK-----------------------------------EATDYMEQMVT 280
            T++    KIG  +                                   EA D+  +M +
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+  D+++Y+TLI  +C  G+L  A+ LL+EM  +    D YT+TILID LCK G +K 
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF-TYSSMVH 396
           A+  L  M K G   N+  Y+ ++D     G++ +A  +F +M   EV  S  +Y+ M++
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN 420

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            LCK K +  A  LL   L   V        +++DGL  SG
Sbjct: 421 GLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 35/196 (17%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ R+  A  ++ +    G   DV+TY  L+D  C+  + D    +  +M+E GI P+
Sbjct: 457 LCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPN 516

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY +LI G  + + L  +  L   +L  G   DV++Y                     
Sbjct: 517 KYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTY--------------------- 555

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                         N+M+ GLCK    D AL M   ++ +G +P+ VT+ I+I+ L +  
Sbjct: 556 --------------NVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKD 601

Query: 197 RLRTARWILKELGDSG 212
               A  +L E+   G
Sbjct: 602 ENDKAEKLLHEMIAKG 617


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 208/417 (49%), Gaps = 4/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P+++ YN +I+A C+  +     TI+ ++ E+ +SPD  TY S+I G  R   L  +
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + ++M + G  P+  +Y++L++ L   G+ +EA  + ++MI   + P   T    +  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     ++A R+F  ++  G  P + TY  LI GLC +G L+ A  +   +   G  PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  ++     NR+ K    +L+ M R G + +   Y  +I  +  +G  K+A   M 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G   ++V+YNT+I  YC  G   +A  +LD M   G + D++++T LI G CK  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A      M   G   N   Y  ++D   KD K+D A ++ E M+      +  TY+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++H L K      A +L    ++ G+        A++DGL  +G    A ++ +K+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 203/450 (45%), Gaps = 39/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  AE I+       + PD  TY  +I  +C+    D+   + N+M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G  P+ VTY++LI G   +  ++ + DL+ EM+  GI P   +    +  L  +G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A R+F DM      P   T+  +++GLC +     A+ +F  + + G  P  VTYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 189 -----------------------------------IKGLCKAGRLRTARWILKELGDSGH 213
                                              IKG C  G  + A  ++  +   GH
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           + N +TY TI+K    +      L IL  M+  G   D + Y  +I  F KI +++ A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV DG+  + V+Y  LI+ YCK+ KL+ A  LL+ M++ G   +  T+ +LI GL 
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K  N  GA    + M + G   N+  Y  ++D L K+G    A+ +F  M     + +  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TYSS++  L +  ++  A  L     + G+
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGL 666



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 202/414 (48%), Gaps = 17/414 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L+NI V      NR  K   ++++ + R G  P++VTYN +I  YC          ++N 
Sbjct: 396 LINILV-----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G S ++VTYN++I G   +   + +L +LD M + G  PD WSY  L+    ++ K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            + A  +F +M+   L P   T+  +++G CK+   D A  +   +++ G  P + TYN+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL K      A  + K + + G  PN +TYT ++    +N    L LE+ + M  +G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y ++I A  + G+++EA +   ++   G+  D ++Y  +I  Y   GK+E A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL--EYMNKIGFDSNLEAYNCIVD 365
             L  M K G +   +T+ +LI GL     +   RL    + +    F       + +  
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 750

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              K  ++D  ++V    +V++     ++V NL  A R   A++LL S +  G+
Sbjct: 751 MSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWFEANELLGSMISQGL 795



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           + L+ + ++G+   +  Y++L+   +R  + +  +D    ML  G+ P++  YN++++ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   +A  + + +   +++P T T+  M+ G C+    D+AL++F  + K G  P  
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTY+ LI GLC +GR+  A  +++E+   G  P A T T  +        Y+    +   
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK KG   + + Y  +I+     G LK A     +M  DGV  + V+YN LIN+  +  +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A+++L+ M + G   +  T+  +I G C  G+ K A L +  M + G  +NL  YN 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           I+      G    A+ + + M       D ++Y+ ++   CK  ++ SA  L    +  G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 419 VRILKSAQKAVVDG----------------LRHSGCR 439
           +   +    A++DG                ++ SGCR
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 169/370 (45%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C     E A  + +D    G  P+V TY  LI   C          + +RM   G+
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ VTYN+LI     N  +  +  +L+ M   G  P++ +YN ++     LG P +A  
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V  +M+    +    T+N ++ G C +  T +ALR+   ++  G  P+  +Y  LI G C
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++ +A  +  E+ D G  PN +TYT ++    ++ K      +L  MKR G   +  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    K      A +  + M+ +G+  ++V+Y  +I+  CK G    A  + ++M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +QG   +  T++ LI  L + G ++ A      + + G   +   Y  +++     GK+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 374 DHAINVFESM 383
           +HA N    M
Sbjct: 687 EHAFNFLGRM 696



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 183/400 (45%), Gaps = 30/400 (7%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C FCK +++E A  +  + +  G+ P+ VTY  LID YC+    D   ++L  M+ +G 
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+V TYN LI G T+ +  S + +L   M+E GI P+V +Y +++  L + G    A  
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  MI     P   T++ ++  L +    + A  +F  L++HG +P+ +TY  +I+   
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G++  A   L  +  +G  P   TY  ++K   +N +Y L  + L+A+         F
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKN-EYLLADQRLAALPDVVPNCS-F 738

Query: 254 GYCT---------------------------VIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
           GY T                           +++     GR  EA + +  M++ G+  D
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
             +YN+L+    +   ++ A  +   M  QG E     +  LI  LC+    K AR+  E
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            M    ++ +      ++D L +DG  D  +     ME +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  ++E+AE +  +  R G++PD +TY  +I+AY      +  +  L RM +AG  P + 
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 79  TYNSLIAGATRNSLLS-------------CSLD-----------LLDEMLEMGIPPDVWS 114
           TY  LI G     LL+             CS             +  ++ E+     V  
Sbjct: 707 TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
            N+L+  L   G+  EAN +   MI   L P    +N +L  L + R  D A+ +F+ + 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G    L  Y  LI  LC+  R + AR   + +      P+ +    ++    R+    
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIA 260
           L +E L  M+ + Y    F   T++A
Sbjct: 887 LCMEFLHIMETRRY-MPSFHIYTILA 911



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 76/161 (47%)

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++K C         +  L  + + G     F Y  ++    ++G      D   +M+++G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           VQ +++ YN +IN  CK+G +  A  ++ ++ +     D +T+T +I G C+  ++  A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
                M K G + N   Y+ +++ L   G+++ A ++   M
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 56/131 (42%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+ PD   YNSL+    R   +  ++ +   M   G    +  Y  L+  L 
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           QL +  EA   F++M+     P      ++++GL ++ Y D  +     ++   ++P   
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 905

Query: 184 TYNILIKGLCK 194
            Y IL +   K
Sbjct: 906 IYTILAREASK 916


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 217/461 (47%), Gaps = 25/461 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  ++++A A++      GV  ++++YN +I+  C          ++  MR 
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD VTYN+L+ G  +   L   L LL EM+  G+ P+V +Y +L++C+ + G    
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    L P   T+  +++G C+    + A ++   +   GF P +VTYN L+ 
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  GR++ A  IL+ + + G  P+ ++Y+T++    R R+     ++   M  KG   
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I       +L EA D   +M+  G+  D V+Y +LIN YC +G+L  A  L 
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFDSNLEAYNCIVDRL 367
           DEM ++GF  D  T+++LI+GL K    K A+   L L Y   +  D     YN +++  
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDV---TYNTLIENC 602

Query: 368 GKD---------------GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 408
             +               G ++ A  VF++M       ++  Y+ M+H   +   +  A 
Sbjct: 603 SNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            L +    S       A  A+V  L   G   E  ++   I
Sbjct: 663 NLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 214/453 (47%), Gaps = 9/453 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS-----FDA 60
           S+ + ++ V +  +   + KA  ++    R G  P V++YN ++DA  +  S     +D 
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +   M   G+SP+V TYN +I G      L   L  + +M + GI P+V +YN+L+ 
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +  K  EA  + + M  G +     ++N ++NGLC          +   ++  G VP
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           + VTYN L+ G CK G L     +L E+   G +PN +TYTT++ C  +       +EI 
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ +G   +   Y T+I  F + G + EA   + +M+  G    +V+YN L++ YC  
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+++ A  +L  M ++G   D  +++ +I G C+   +  A    E M + G   +   Y
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + ++  L    K+  A ++F  M  +    D  TY+S+++  C    L  A +L    ++
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            G          +++GL      + AK++  K+
Sbjct: 551 RGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 156/361 (43%), Gaps = 50/361 (13%)

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV--------------- 183
           +C      +A F++++  L +  +   AL +     +HGF P ++               
Sbjct: 124 LCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSS 183

Query: 184 -------------------------TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                                    TYN++I+G+   G L      ++++   G +PN +
Sbjct: 184 NHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVV 243

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY T++    + +K K  + +L AM   G   +   Y +VI      GR+ E  + +E+M
Sbjct: 244 TYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM 303

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G+  D V+YNTL+N +CKEG L    +LL EM  +G   +  T+T LI+ +CKAGN+
Sbjct: 304 RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A    + M   G   N   Y  ++D   + G ++ A  V   M V        TY+++
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR-RE-AKKIQSKIRMA 452
           VH  C   R+  A  +L   ++ G+     +   V+ G     CR RE  K  Q K  M 
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF----CRERELGKAFQMKEEMV 479

Query: 453 K 453
           +
Sbjct: 480 E 480



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 15/331 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +C   R+++A  I+   +  G+ PDVV+Y+ +I  +C+       + +   M E
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD VTY+SLI G      L  + DL  EM+  G+PPD  +Y SL++     G+  +
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSK 540

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI- 189
           A R+  +M+     P   T+++++NGL K   T  A R+   L     VP+ VTYN LI 
Sbjct: 541 ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600

Query: 190 --------------KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
                         KG C  G +  A  + K +    H PNA  Y  ++    R      
Sbjct: 601 NCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHK 660

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +   ++   +         ++ A  + G   E +  ++ ++      D      L+ 
Sbjct: 661 AYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVE 720

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +  KEG ++A   +L EM K G   D   H+
Sbjct: 721 VNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 4/437 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +   C+  +L  A + +   I+LG  PD VT++ LI+  C          +++RM 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  P ++T N+L+ G   N  +S ++ L+D M+E G  P+  +Y  ++  + + G+  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M    +      ++I+++GLCK+   DNA  +F  ++  GF  +++ Y  LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C AGR      +L+++      P+ + ++ ++ C  +  K +   E+   M ++G +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K  +L +A   ++ MV+ G   +I ++N LIN YCK   ++    L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M  +G   D  T+  LI G C+ G ++ A+   + M       ++ +Y  ++D L  
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+ + A+ +FE +E      D   Y+ ++H +C A ++  A  L  S    GV+     
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 426 QKAVVDGLRHSGCRREA 442
              ++ GL   G   EA
Sbjct: 530 YNIMIGGLCKKGSLSEA 546



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 205/420 (48%), Gaps = 4/420 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P ++ ++ L     +   +D    +  +M   GI+ ++ T + +I    R   LS +   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + +++++G  PD  ++++L++ L   G+  EA  +   M+     P   T N ++NGLC 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N    +A+ +   + + GF P  VTY  ++K +CK+G+   A  +L+++ +     +A+ 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ I+    ++        + + M+ KG+  D   Y T+I  F   GR  +    +  M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              +  D+V+++ LI+ + KEGKL  A  L  EM ++G   D  T+T LIDG CK   + 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A   L+ M   G   N+  +N +++   K   ID  + +F  M     V D+ TY++++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              C+  +L  A +L    +   VR    + K ++DGL  +G   +A +I  KI  +K+ 
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 180/373 (48%), Gaps = 1/373 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     +I +   CK   L+ A  +  +    G   D++ Y  LI  +C    +D G  
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M +  I+PDVV +++LI    +   L  + +L  EM++ GI PD  +Y SL+    
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+AN +   M+     P   TFNI++NG CK    D+ L +FR +   G V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+G C+ G+L  A+ + +E+      P+ ++Y  ++     N + +  LEI   +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D   Y  +I       ++ +A D    +   GV+ D+ +YN +I   CK+G L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A LL  +ME+ G   +  T+ ILI      G+   +   +E + + GF  +      +
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603

Query: 364 VDRLGKDGKIDHA 376
           VD L  DG++  +
Sbjct: 604 VDMLS-DGRLKKS 615



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 4/428 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V   C   ++  A  +I   +  G  P+ VTY  ++   C+         +L +M 
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  I  D V Y+ +I G  ++  L  + +L +EM   G   D+  Y +L+      G+ D
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +  ++ +DMI   +TP    F+ +++   K      A  + + + + G  P+ VTY  LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK  +L  A  +L  +   G  PN  T+  ++    +      GLE+   M  +G  
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  F ++G+L+ A +  ++MV+  V+ DIVSY  L++  C  G+ E A  +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +++EK   E D   + I+I G+C A  +  A      +   G   +++ YN ++  L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A  +F  ME      +  TY+ ++           ++KL+    + G  +  S 
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599

Query: 426 QKAVVDGL 433
            K VVD L
Sbjct: 600 VKMVVDML 607



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A+ +F+ + +    P L+ ++ L   + +  +      + K++   G A N  T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + CC R RK  L    +  + + GY  D   + T+I      GR+ EA + +++MV  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +  +++ N L+N  C  GK+  A LL+D M + GF+ ++ T+  ++  +CK+G    A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L  M +     +   Y+ I+D L KDG +D+A N+F  ME+K    D   Y++++   C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A R    +KLL   +K  +     A  A++D     G  REA+++  ++    IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 35/260 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N+L+KA  ++   +  G  P++ T+N+LI+ YC+    D G  +  +M   G+  D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L  + +L  EM+   + PD+ SY  L+  L   G+P++A  +F+
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481

Query: 137 -------------------------------DMICG----DLTPCTATFNIMLNGLCKNR 161
                                          D+ C      + P   T+NIM+ GLCK  
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +FR +++ G  P   TYNILI+     G    +  +++E+   G + +A T  
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601

Query: 222 TIMKCCFRNRKYKLGLEILS 241
            ++      R  K  L++LS
Sbjct: 602 MVVDMLSDGRLKKSFLDMLS 621


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 218/439 (49%), Gaps = 4/439 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K   +E A  +    +  G+ P ++T+N LI+   +         IL+++ +
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPDV TY SLI G  RN  L  +  + D M++ G  P+  +Y++L++ L   G+ DE
Sbjct: 269 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++MI   + P   T+ + +  LC   + + A+ +   ++K G  P + TY  LI 
Sbjct: 329 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 388

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G+L  A  +  ++   G  PN +TY  ++       ++   L+I   M+  G   
Sbjct: 389 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 448

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I      G +++A    E+M+  G    +V+YNTLIN Y  +G +  A  LL
Sbjct: 449 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M++ G E D++T+  L+ G  K G ++ A  + + M + G + N  +Y  ++D   KD
Sbjct: 509 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKD 568

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+D A+++ E ME      +  +Y+++++ L K  R   A K+     + G+       
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY 628

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++DGL  +G  + A KI
Sbjct: 629 TTLIDGLCRNGRTQFAFKI 647



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 215/460 (46%), Gaps = 28/460 (6%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T+  N  +   C    +EKA  +    +++G LP VVTYN LI+ Y    + +    +L
Sbjct: 449 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 508

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M+E G  PD  TYN L++G ++   L  +     EM+E G+ P+  SY +L+    + 
Sbjct: 509 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKD 568

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK D A  + + M      P   ++N ++NGL K      A ++   + + G +P ++TY
Sbjct: 569 GKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY 628

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI GLC+ GR + A  I  ++      PN  TY++++    +  K      +L  M+R
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 688

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-- 303
           KG   D   + ++I  FV +GR+  A   + +MV  G + +  +Y+ L+    KE  L  
Sbjct: 689 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLE 748

Query: 304 -------EAAYL---------------LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
                  EA Y                LL  M + G E    T++ L+ GLC+ G    A
Sbjct: 749 EKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 808

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              ++ M + GF  + E Y  ++    K+ ++DHA+ +F S+E K        Y +++  
Sbjct: 809 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 868

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           LCKA ++  A  L  + L+      +     +VDGL   G
Sbjct: 869 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 908



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 172/347 (49%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V TY  LI    +    +    + ++M + G+ P+ VTYN+LI         S +
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +   M   G   +  +YN ++  L   G  ++A  +F+ M+     P   T+N ++NG
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
                  +NA R+   ++++G  P+  TYN L+ G  K G+L +A +  +E+ + G  PN
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++YTT++    ++ K  + L +L  M+  G   +   Y  VI    K  R  EA    +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+  ++++Y TLI+  C+ G+ + A+ +  +MEK+    + YT++ LI GLC+ G
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
               A + L+ M + G   +   +  ++D     G+IDHA  +   M
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 222/487 (45%), Gaps = 63/487 (12%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN--------------- 66
           +LE A  +    ++ G++P+ VTYN LI+  C    F     I +               
Sbjct: 395 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 454

Query: 67  --------------------RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
                               +M + G  P VVTYN+LI G      ++ +  LLD M E 
Sbjct: 455 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G  PD W+YN L+    + GK + A+  FQ+M+   L P   ++  +++G  K+   D A
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA 574

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L +   +++ G  P + +YN +I GL K  R   A  I  ++ + G  PN ITYTT++  
Sbjct: 575 LSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDG 634

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             RN + +   +I   M+++    + + Y ++I    + G+  EA   +++M   G+  D
Sbjct: 635 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 694

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            V++ +LI+ +   G+++ A+LLL  M   G + +  T+++L+ GL K   +   ++ ++
Sbjct: 695 EVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQ 754

Query: 347 Y------------------------MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +                        M++IG +  L+ Y+ +V  L + G+   A  + + 
Sbjct: 755 HEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 814

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M+ +    D   Y S++   CK   +  A K+  S    G ++  S  +A++  L  +G 
Sbjct: 815 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ 874

Query: 439 RREAKKI 445
             EA+ +
Sbjct: 875 VEEAQAL 881



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 193/401 (48%), Gaps = 24/401 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  F K  +LE A     + +  G+ P+ V+Y  LID + +    D   ++L RM E
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+V +YN++I G ++ +  S +  + D+M E G+ P+V +Y +L+  L + G+   
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQF 643

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F DM      P   T++ ++ GLC+    D A  + + +++ G  P+ VT+  LI 
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-----CCFRNRKYKLGLE------- 238
           G    GR+  A  +L+ + D G  PN  TY+ ++K     C     K  +  E       
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSP 763

Query: 239 ------------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
                       +L+ M   G       Y T+++   + GR  EA   ++ M   G   D
Sbjct: 764 HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 823

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
              Y +L+  +CK  +++ A  +   +E +GF+     +  LI  LCKAG ++ A+   +
Sbjct: 824 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
            M +  ++++   +  +VD L K+G++D  + +   ME K+
Sbjct: 884 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKN 924



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 186/378 (49%), Gaps = 4/378 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            LN +   G    + + N+L+    +  ++  + +L  +ML  GI P + ++N+L++ L 
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK  EA  +   +   DL+P   T+  ++ G C+NR  D A  +F  + K G  P  V
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI GLC  GR+  A  +L+E+ + G  P   TYT  +         +  +E+++ M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K++G   +   Y  +I+   ++G+L+ A     +M+ +G+  + V+YN LIN  C  G+ 
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  +   ME  G   +  T+  +I GLC  G+I+ A +  E M K+G    +  YN +
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++     G +++A  + + M+      D +TY+ +V    K  +L SAS      ++ G+
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 420 RILKSAQKAVVDGLRHSG 437
                +   ++DG    G
Sbjct: 552 NPNPVSYTTLIDGHSKDG 569



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 157/350 (44%), Gaps = 24/350 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K NR  +AE I       G+LP+V+TY  LID  C+       + I + M +
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 653

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P++ TY+SLI G  +      +  LL EM   G+ PD  ++ SL+     LG+ D 
Sbjct: 654 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 713

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKN--------RYTDNALRMFRGLQKH------ 176
           A  + + M+     P   T++++L GL K              A+  F   +K       
Sbjct: 714 AFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIV 773

Query: 177 ----------GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
                     G  P L TY+ L+ GLC+ GR   A  ++K++ + G  P+   Y +++  
Sbjct: 774 SNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 833

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +N +    L+I  +++ KG+      Y  +I A  K G+++EA    + M+      D
Sbjct: 834 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 893

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            + +  L++   KEG+L+    LL  ME + F  +  T+ IL   L + G
Sbjct: 894 EIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D   AP       ++K C    + +   + L+ +   G+ F  +   T++    K   ++
Sbjct: 163 DRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 222

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM+  G+Q  ++++NTLIN+  K+GK+  A L+L ++ +     D +T+T LI
Sbjct: 223 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 282

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
            G C+  N+  A    + M K G D N   Y+ +++ L  +G++D A+++ E M  K   
Sbjct: 283 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              +TY+  +  LC  +    A +L+    K G R       A++ GL   G
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 207/417 (49%), Gaps = 4/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P+++ YN +I+A C+  +     TI+ ++ E+ +SPD  TY S+I G  R   L  +
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + ++M + G  P+  +Y++L++ L   G+ +EA  + ++MI   + P   T    +  
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     ++A R+F  ++  G  P + TY  LI GLC +G L+ A  +   +   G  PN
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  ++     NR+ K    +L+ M R G   +   Y  +I  +  +G  K+A   M 
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G   ++V+YNT+I  YC  G   +A  +LD M   G + D++++T LI G CK  
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A      M   G   N   Y  ++D   KD K+D A ++ E M+      +  TY+
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 739

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++H L K      A +L    ++ G+        A++DGL  +G    A ++ +K+
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 203/450 (45%), Gaps = 39/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  AE I+       + PD  TY  +I  +C+    D+   + N+M
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G  P+ VTY++LI G   +  ++ + DL+ EM+  GI P   +    +  L  +G  
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A R+F DM      P   T+  +++GLC +     A+ +F  + + G  P  VTYN L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 189 -----------------------------------IKGLCKAGRLRTARWILKELGDSGH 213
                                              IKG C  G  + A  ++  +   GH
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           + N +TY TI+K    +      L IL  M+  G   D + Y  +I  F KI +++ A  
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV DG+  + V+Y  LI+ YCK+ KL+ A  LL+ M++ G   +  T+ +LI GL 
Sbjct: 687 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K  N  GA    + M + G   N+  Y  ++D L K+G    A+ +F  M     + +  
Sbjct: 747 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 806

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TYSS++  L +  ++  A  L     + G+
Sbjct: 807 TYSSLIRALGQEGKVEEAENLFAELERHGL 836



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 202/414 (48%), Gaps = 17/414 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L+NI V      NR  K   ++++ + R G+  ++VTYN +I  YC          ++N 
Sbjct: 566 LINILV-----ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNN 620

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G S ++VTYN++I G   +   + +L +LD M + G  PD WSY  L+    ++ K
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            + A  +F +M+   L P   T+  +++G CK+   D A  +   +++ G  P + TYN+
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL K      A  + K + + G  PN +TYT ++    +N    L LE+ + M  +G
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y ++I A  + G+++EA +   ++   G+  D ++Y  +I  Y   GK+E A+
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL--EYMNKIGFDSNLEAYNCIVD 365
             L  M K G +   +T+ +LI GL     +   RL    + +    F       + +  
Sbjct: 861 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 920

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              K  ++D  ++V    +V++     ++V NL  A R   A++LL S +  G+
Sbjct: 921 MSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWFEANELLGSMISQGL 965



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           + L+ + ++G+   +  Y++L+   +R  + +  +D    ML  G+ P++  YN++++ L
Sbjct: 336 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   +A  + + +   +++P T T+  M+ G C+    D+AL++F  + K G  P  
Sbjct: 396 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 455

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTY+ LI GLC +GR+  A  +++E+   G  P A T T  +        Y+    +   
Sbjct: 456 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 515

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK KG   + + Y  +I+     G LK A     +M  DGV  + V+YN LIN+  +  +
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A+++L+ M + G   +  T+  +I G C  G+ K A L +  M + G  +NL  YN 
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           I+      G    A+ + + M       D ++Y+ ++   CK  ++ SA  L    +  G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 419 VRILKSAQKAVVDG----------------LRHSGCR 439
           +   +    A++DG                ++ SGCR
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 169/370 (45%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C     E A  + +D    G  P+V TY  LI   C          + +RM   G+
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 556

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ VTYN+LI     N  +  +  +L+ M   G+  ++ +YN ++     LG P +A  
Sbjct: 557 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAML 616

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V  +M+    +    T+N ++ G C +  T +ALR+   ++  G  P+  +Y  LI G C
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 676

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++ +A  +  E+ D G  PN +TYT ++    ++ K      +L  MKR G   +  
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    K      A +  + M+ +G+  ++V+Y  +I+  CK G    A  + ++M
Sbjct: 737 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +QG   +  T++ LI  L + G ++ A      + + G   +   Y  +++     GK+
Sbjct: 797 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 856

Query: 374 DHAINVFESM 383
           +HA N    M
Sbjct: 857 EHAFNFLGRM 866



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 183/400 (45%), Gaps = 30/400 (7%)

Query: 14   VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            +C FCK +++E A  +  + +  G+ P+ VTY  LID YC+    D   ++L  M+ +G 
Sbjct: 672  ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 74   SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             P+V TYN LI G T+ +  S + +L   M+E GI P+V +Y +++  L + G    A  
Sbjct: 732  RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 134  VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            +F  MI     P   T++ ++  L +    + A  +F  L++HG +P+ +TY  +I+   
Sbjct: 792  MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 194  KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             +G++  A   L  +  +G  P   TY  ++K   +N +Y L  + L+A+         F
Sbjct: 852  MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKN-EYLLADQRLAALPDVVPNCS-F 908

Query: 254  GYCT---------------------------VIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            GY T                           +++     GR  EA + +  M++ G+  D
Sbjct: 909  GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 968

Query: 287  IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
              +YN+L+    +   ++ A  +   M  QG E     +  LI  LC+    K AR+  E
Sbjct: 969  QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 1028

Query: 347  YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
             M    ++ +      ++D L +DG  D  +     ME +
Sbjct: 1029 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 1068



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 19   KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
            +  ++E+AE +  +  R G++PD +TY  +I+AY      +  +  L RM +AG  P + 
Sbjct: 817  QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 876

Query: 79   TYNSLIAGATRNSLLS-------------CSLD-----------LLDEMLEMGIPPDVWS 114
            TY  LI G     LL+             CS             +  ++ E+     V  
Sbjct: 877  TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 936

Query: 115  YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
             N+L+  L   G+  EAN +   MI   L P    +N +L  L + R  D A+ +F+ + 
Sbjct: 937  QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 996

Query: 175  KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
              G    L  Y  LI  LC+  R + AR   + +      P+ +    ++    R+    
Sbjct: 997  TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 1056

Query: 235  LGLEILSAMKRKGYTFDGFGYCTVIA 260
            L +E L  M+ + Y    F   T++A
Sbjct: 1057 LCMEFLHIMETRRY-MPSFHIYTILA 1081



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 76/161 (47%)

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++K C         +  L  + + G     F Y  ++    ++G      D   +M+++G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           VQ +++ YN +IN  CK+G +  A  ++ ++ +     D +T+T +I G C+  ++  A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
                M K G + N   Y+ +++ L   G+++ A ++   M
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 56/131 (42%)

Query: 64   ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +L  M   G+ PD   YNSL+    R   +  ++ +   M   G    +  Y  L+  L 
Sbjct: 956  LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 1015

Query: 124  QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            QL +  EA   F++M+     P      ++++GL ++ Y D  +     ++   ++P   
Sbjct: 1016 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 1075

Query: 184  TYNILIKGLCK 194
             Y IL +   K
Sbjct: 1076 IYTILAREASK 1086


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 225/483 (46%), Gaps = 43/483 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNR 67
           LN  +   C   R + A  ++   +  LG  PDV +YN LI   C +  S +A   +L+ 
Sbjct: 132 LNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHM 191

Query: 68  MREAGI--SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             + G   SP+VV+Y+++I G  +   +  +  L DEM+  G PPDV +Y+SL+  L + 
Sbjct: 192 TADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKA 251

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
              ++A  + Q M    + P T T+NIM+ G C     + A+R+ + +   G  P++VTY
Sbjct: 252 QAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY 311

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-------------------- 225
            +LI+  CK GR   AR +   +   G  PN+  Y  ++                     
Sbjct: 312 ILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 371

Query: 226 --CCFRNRKYKL-------------GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
               F +R + +              +   + M++ G   D   Y TVI    KIGR+++
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A  +  QMV++G+  +I+S+ +LI+  C  G+ +    L  EM  +G   D      ++D
Sbjct: 432 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 491

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----K 386
            LCK G +  A+   + +  IG   N+ +YN ++D     GK+D +I  F+ M       
Sbjct: 492 NLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRP 551

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           DS+TY+++++   K  R+  A  L     +  V+        ++ GL  +G    A+++ 
Sbjct: 552 DSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELY 611

Query: 447 SKI 449
            K+
Sbjct: 612 MKM 614



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 212/419 (50%), Gaps = 8/419 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  NI +  +C   +LE+A  ++      G+ PDVVTY +LI  YC+        ++ 
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331

Query: 66  NRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           + M   G  P+   Y+ L+ G AT+ +L+    DLLD M+  GIP +  ++N L+    +
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVR-DLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D+A   F +M    L P   +++ +++ LCK    ++A+  F  +   G  P +++
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +  LI GLC  G  +    +  E+ + G  P+AI   TIM    +  +     +    + 
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 510

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +   Y T+I  +  +G++ E+    ++MV+ G++ D  +YN L+N Y K G++E
Sbjct: 511 HIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVE 570

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCI 363
            A  L  EM ++  +    T  I++ GL +AG I  AR L+++ +++ G    +E YN +
Sbjct: 571 DALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR-GTQLRIETYNTV 629

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +  L ++  +D A+ +FE +  K    D +T++ +++ L K  R+  A  L  + +  G
Sbjct: 630 LGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRG 688



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 180/381 (47%), Gaps = 35/381 (9%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +C + K   ++KA     +  + G+ PDVV+Y+ +I   C+    +      N+
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438

Query: 68  MREAGISPDVVTYNSLIAGATR--------------------------NSLLSC------ 95
           M   G+SP+++++ SLI G                             N+++        
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498

Query: 96  ---SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
              + D  D ++ +G+ P+V SYN+L+     +GK DE+ + F  M+   L P + T+N 
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +LNG  KN   ++AL ++R + +       +T NI++ GL +AGR+  AR +  ++ D G
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
                 TY T++     N      L +   ++ K +  D + +  VI A +K+GR+ EA 
Sbjct: 619 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                MV  G    +++Y+ +I    +EG LE +  L   MEK G   D +   ++I  L
Sbjct: 679 SLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRL 738

Query: 333 CKAGNIKGARLHLEYMNKIGF 353
            + G+++ A  +L  +++  F
Sbjct: 739 LEKGDVRRAGTYLTKIDEKNF 759



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 18/342 (5%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE-------ANRVFQDMICGDLTPCTA 148
           +L+L DE+L    P  V ++NS++  + +             A  +F  M    +    A
Sbjct: 33  ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMAA 92

Query: 149 T---FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWI 204
                 I++   C     D A   F    K G+  + VT N LIKGLC   R   A   +
Sbjct: 93  NRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMV 152

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY---TFDGFGYCTVIAA 261
            + + + G+ P+  +Y  ++K     +K +  LE+L  M   G    + +   Y T+I  
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F K G + +A    ++M+  G   D+V+Y++LI+  CK   +  A  +L  M  +G   +
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+ I+I G C  G ++ A   L+ M+  G   ++  Y  ++    K G+   A +VF+
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           SM  K    +S  Y  ++H       L     LL   ++ G+
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 374



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 109/230 (47%), Gaps = 1/230 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  + K  R+E A A+  +  R  V    +T N+++    Q     A   +  +M +
Sbjct: 557 NALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVD 616

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G    + TYN+++ G   NS +  +L + +++       DVW++N +++ L ++G+ DE
Sbjct: 617 RGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDE 676

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M+     P   T+++M+    +    + +  +F  ++K+G   +    N++I+
Sbjct: 677 AKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIR 736

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            L + G +R A   L ++ +   +  A T   ++      +KY+  ++ L
Sbjct: 737 RLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIV-SEKKYQKEVKFL 785



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 11/226 (4%)

Query: 235 LGLEILSAMKRKGYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
           L + + + M R G      + +    +I  F  +GRL  A       +  G ++  V+ N
Sbjct: 74  LAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLN 133

Query: 292 TLINLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
            LI   C   + + A  ++   M + G+  D +++  LI GLC     + A   L +M  
Sbjct: 134 QLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTA 193

Query: 351 IGF---DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
            G      N+ +Y+ I+D   K+G++D A  +F+ M  +    D  TYSS++  LCKA+ 
Sbjct: 194 DGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQA 253

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +  A  +L      GV         ++ G    G   EA ++  K+
Sbjct: 254 MNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 201/414 (48%), Gaps = 38/414 (9%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           +LGV+P++  YN +I++ C+    +    + + M E G++P+ VTY  LI G  R + L 
Sbjct: 358 KLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLD 417

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +    ++M+E GI   V+SYNS+++C  + GK   A  +F++M+   L P  AT+  ++
Sbjct: 418 VAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLI 477

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G CK+     A +++  +   G  P  VT+  LI GLC+  ++  A  +  E+ +    
Sbjct: 478 SGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKIL 537

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +TY  +++   R        E+L  M +KG + D + Y  +IA     GR+ EA ++
Sbjct: 538 PNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEF 597

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA---------------------------- 306
           +  +     +LD + Y  L+  +CKEG+++ A                            
Sbjct: 598 INDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN 657

Query: 307 ------YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
                 + LL EM  +G + D   +TILIDG  K+GN+K A      M   G+  N   Y
Sbjct: 658 QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTY 717

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKL 410
             +V+ L K G ++ A  +F+ M V ++     TY   + +L K   + +A +L
Sbjct: 718 TALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL 771



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 190/382 (49%), Gaps = 6/382 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N+ +   CK+ R+ +A  +       G+  D+VTY  L+   C+   F+ G  +
Sbjct: 258 LSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEM 317

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++ M E G  P     + LI G  +   +  + +LL+++ ++G+ P+++ YNS+++ L +
Sbjct: 318 MDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCK 377

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK +EA  +F  M    L P   T+ I+++G  +    D A   F  + + G    + +
Sbjct: 378 TGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYS 437

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I   CK G+++ A  + KE+ D G  P   TYT+++    ++       ++   M 
Sbjct: 438 YNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMT 497

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   +   +  +I    +I ++ EA+   ++MV   +  + V+YN LI  +C+EG   
Sbjct: 498 GKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTT 557

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-DSNLEA--YN 361
            A+ LLDEM K+G   D YT+  LI GLC  G +  A+   E++N +      L+   Y 
Sbjct: 558 RAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK---EFINDLHHKHQRLDELCYT 614

Query: 362 CIVDRLGKDGKIDHAINVFESM 383
            ++    K+G+I  A+   + M
Sbjct: 615 ALLQGFCKEGRIKEALVARQEM 636



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 192/413 (46%), Gaps = 4/413 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +  GV PD   Y +++   C+   F+    I+N+    G S  +VTYN  I G  ++  +
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++++   + E G+  D+ +Y +L+  L ++ + +    +  +MI     P  A  + +
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + GL K    + A  +   + K G VP L  YN +I  LCK G+L  A  +   + + G 
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TYT ++    R  K  +     + M   G +   + Y ++I    K G++K A  
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAEL 456

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++MV  G++  + +Y +LI+ YCK+G +  A+ L  EM  +G   +  T T LI GLC
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           +   +  A    + M ++    N   YN +++   ++G    A  + + M  K    D++
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           TY  ++  LC   R+  A + +        R+ +    A++ G    G  +EA
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEA 629



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 12/426 (2%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  +++ AE +  + +  G+ P V TY  LI  YC+       + + + M   GI+P+ 
Sbjct: 446 CKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNT 505

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VT+ +LI G  + + ++ +  L DEM+E+ I P+  +YN L+    + G    A  +  +
Sbjct: 506 VTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDE 565

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAG 196
           MI   L+P T T+  ++ GLC       A      L  KH  + EL  Y  L++G CK G
Sbjct: 566 MIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDEL-CYTALLQGFCKEG 624

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R++ A    +E+   G   + ++Y  ++     N+  ++  E+L  M  KG   D   Y 
Sbjct: 625 RIKEALVARQEMVGRGLQMDLVSYAVLISGAL-NQNDRILFELLREMHGKGMQPDNVIYT 683

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F+K G LK+A ++   M+ +G   + V+Y  L+N   K G +  A LL   M   
Sbjct: 684 ILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVG 743

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T+   +D L K GN++ A L L      G  +N   YN ++    + GK   A
Sbjct: 744 EAIPNHITYGCFLDHLTKEGNMENA-LQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEA 802

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             + + M     V D  TYS+ ++  CK   + +A  +    L+ G++      + V + 
Sbjct: 803 AKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK----PDRVVFNF 858

Query: 433 LRHSGC 438
           L H+ C
Sbjct: 859 LIHACC 864



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 182/371 (49%), Gaps = 4/371 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           ++MLI  Y Q      G  ++N MR+ G+ P+V T ++L+    R       L+L D ++
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PD + Y  ++ CL +L   ++A  +         +    T+N+ +NGLCK++   
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ + R L + G   +LVTY  L+ GLC+         ++ E+ + G+ P+    + ++
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           +   +    +   E+L+ + + G   + F Y ++I +  K G+L+EA      M   G+ 
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            + V+Y  LI+ + +  KL+ A+   ++M + G     Y++  +I+  CK G +K A L 
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            + M   G    +  Y  ++    KDG +  A  ++  M  K    ++ T+++++  LC+
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 401 AKRLPSASKLL 411
             ++  ASKL 
Sbjct: 518 INKMAEASKLF 528



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 182/395 (46%), Gaps = 6/395 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+ N++ +A  +  + + L +LP+ VTYN+LI+ +C+  +    + +L+ M + G+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPD  TY  LIAG      +S + + ++++       D   Y +L+    + G+  EA  
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             Q+M+   L     ++ ++++G   N+       + R +   G  P+ V Y ILI G  
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+G L+ A      +   G+ PN++TYT ++   F+         +   M       +  
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y   +    K G ++ A      M+  G   + V+YN LI  YC+ GK + A  LLD M
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G   D  T++  I   CK GN+  A    E M + G   +   +N ++     +G++
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
           D A+ +   M ++       TY S++  L +  RL
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 163/370 (44%), Gaps = 10/370 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+     +A  ++ + I+ G+ PD  TY  LI   C           +N +  
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
                D + Y +L+ G  +   +  +L    EM+  G+  D+ SY  L+      G  ++
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-----GALNQ 658

Query: 131 ANRV----FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
            +R+     ++M    + P    + I+++G  K+     A   +  +   G+VP  VTY 
Sbjct: 659 NDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYT 718

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ GL KAG +  A+ + K +      PN ITY   +    +    +  L++ +AM + 
Sbjct: 719 ALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQG 778

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
            +  +   Y  +I  + +IG+ +EA   ++ M+  G+  D ++Y+T I  YCK G ++AA
Sbjct: 779 SFA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAA 837

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + + M ++G + D+     LI   C  G +  A      M   G       Y+ ++ +
Sbjct: 838 MDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQ 897

Query: 367 LGKDGKIDHA 376
           L +  ++   
Sbjct: 898 LAQRARLTQV 907



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +  +C+  + ++A  ++   I +G++PD +TY+  I  YC+  + DA   + 
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             M + G+ PD V +N LI     N  L  +L L ++M+  G+ P   +Y+SLM  L Q
Sbjct: 842 ECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 93/209 (44%), Gaps = 5/209 (2%)

Query: 246 KGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           K Y F    G+  +I  +V+  R+ +    +  M   G+  ++ + + L+N   +  K  
Sbjct: 148 KKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFR 207

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
               L D +   G + D Y +T+++  LC+  +   A+  +      G   ++  YN  +
Sbjct: 208 QVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFI 267

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L K  ++  A+ V  S+  K    D  TY ++V  LC+ +      +++   ++ G  
Sbjct: 268 NGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYV 327

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             ++A   +++GL   G    A ++ +K+
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKV 356


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 208/417 (49%), Gaps = 4/417 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P+++ YN +I+A C+  +     TI+ ++ E+ +SPD  TY S+I G  R   L  +
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L + ++M + G  P+  +Y++L++ L   G+ +EA  + ++MI   + P   T    +  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     ++A R+F  ++  G  P + TY  LI GLC +G L+ A  +   +   G  PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY  ++     NR+ K    +L+ M R G + +   Y  +I  +  +G  K+A   M 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G   ++V+YNT+I  YC  G   +A  +LD M   G + D++++T LI G CK  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A      M   G   N   Y  ++D   KD K+D A ++ E M+      +  TY+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYN 569

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++H L K      A +L    ++ G+        A++DGL  +G    A ++ +K+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 203/450 (45%), Gaps = 39/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  AE I+       + PD  TY  +I  +C+    D+   + N+M
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G  P+ VTY++LI G   +  ++ + DL+ EM+  GI P   +    +  L  +G  
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A R+F DM      P   T+  +++GLC +     A+ +F  + + G  P  VTYN L
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 189 -----------------------------------IKGLCKAGRLRTARWILKELGDSGH 213
                                              IKG C  G  + A  ++  +   GH
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           + N +TY TI+K    +      L IL  M+  G   D + Y  +I  F KI +++ A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +MV DG+  + V+Y  LI+ YCK+ KL+ A  LL+ M++ G   +  T+ +LI GL 
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K  N  GA    + M + G   N+  Y  ++D L K+G    A+ +F  M     + +  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TYSS++  L +  ++  A  L     + G+
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGL 666



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 202/414 (48%), Gaps = 17/414 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L+NI V      NR  K   ++++ + R G  P++VTYN +I  YC          ++N 
Sbjct: 396 LINILV-----ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G S ++VTYN++I G   +   + +L +LD M + G  PD WSY  L+    ++ K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            + A  +F +M+   L P   T+  +++G CK+   D A  +   +++ G  P + TYN+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GL K      A  + K + + G  PN +TYT ++    +N    L LE+ + M  +G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y ++I A  + G+++EA +   ++   G+  D ++Y  +I  Y   GK+E A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL--EYMNKIGFDSNLEAYNCIVD 365
             L  M K G +   +T+ +LI GL     +   RL    + +    F       + +  
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 750

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              K  ++D  ++V    +V++     ++V NL  A R   A++LL S +  G+
Sbjct: 751 MSAKLAELDPGLSV----QVQN-----ALVSNLSTAGRWFEANELLGSMISQGL 795



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 191/397 (48%), Gaps = 20/397 (5%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           + L+ + ++G+   +  Y++L+   +R  + +  +D    ML  G+ P++  YN++++ L
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   +A  + + +   +++P T T+  M+ G C+    D+AL++F  + K G  P  
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTY+ LI GLC +GR+  A  +++E+   G  P A T T  +        Y+    +   
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK KG   + + Y  +I+     G LK A     +M  DGV  + V+YN LIN+  +  +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A+++L+ M + G   +  T+  +I G C  G+ K A L +  M + G  +NL  YN 
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           I+      G    A+ + + M       D ++Y+ ++   CK  ++ SA  L    +  G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 419 VRILKSAQKAVVDG----------------LRHSGCR 439
           +   +    A++DG                ++ SGCR
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 169/370 (45%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C     E A  + +D    G  P+V TY  LI   C          + +RM   G+
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ VTYN+LI     N  +  +  +L+ M   G  P++ +YN ++     LG P +A  
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V  +M+    +    T+N ++ G C +  T +ALR+   ++  G  P+  +Y  LI G C
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++ +A  +  E+ D G  PN +TYT ++    ++ K      +L  MKR G   +  
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    K      A +  + M+ +G+  ++V+Y  +I+  CK G    A  + ++M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +QG   +  T++ LI  L + G ++ A      + + G   +   Y  +++     GK+
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 374 DHAINVFESM 383
           +HA N    M
Sbjct: 687 EHAFNFLGRM 696



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 183/400 (45%), Gaps = 30/400 (7%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C FCK +++E A  +  + +  G+ P+ VTY  LID YC+    D   ++L  M+ +G 
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+V TYN LI G T+ +  S + +L   M+E GI P+V +Y +++  L + G    A  
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  MI     P   T++ ++  L +    + A  +F  L++HG +P+ +TY  +I+   
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G++  A   L  +  +G  P   TY  ++K   +N +Y L  + L+A+         F
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKN-EYLLADQRLAALPDVVPNCS-F 738

Query: 254 GYCT---------------------------VIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
           GY T                           +++     GR  EA + +  M++ G+  D
Sbjct: 739 GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPD 798

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
             +YN+L+    +   ++ A  +   M  QG E     +  LI  LC+    K AR+  E
Sbjct: 799 QEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFE 858

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            M    ++ +      ++D L +DG  D  +     ME +
Sbjct: 859 NMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 25/266 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  ++E+AE +  +  R G++PD +TY  +I+AY      +  +  L RM +AG  P + 
Sbjct: 647 QEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLW 706

Query: 79  TYNSLIAGATRNSLLS-------------CSLD-----------LLDEMLEMGIPPDVWS 114
           TY  LI G     LL+             CS             +  ++ E+     V  
Sbjct: 707 TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQV 766

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
            N+L+  L   G+  EAN +   MI   L P    +N +L  L + R  D A+ +F+ + 
Sbjct: 767 QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G    L  Y  LI  LC+  R + AR   + +      P+ +    ++    R+    
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIA 260
           L +E L  M+ + Y    F   T++A
Sbjct: 887 LCMEFLHIMETRRY-MPSFHIYTILA 911



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 76/161 (47%)

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++K C         +  L  + + G     F Y  ++    ++G      D   +M+++G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           VQ +++ YN +IN  CK+G +  A  ++ ++ +     D +T+T +I G C+  ++  A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
                M K G + N   Y+ +++ L   G+++ A ++   M
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 56/131 (42%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+ PD   YNSL+    R   +  ++ +   M   G    +  Y  L+  L 
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           QL +  EA   F++M+     P      ++++GL ++ Y D  +     ++   ++P   
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFH 905

Query: 184 TYNILIKGLCK 194
            Y IL +   K
Sbjct: 906 IYTILAREASK 916


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 204/412 (49%), Gaps = 3/412 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I + +FC++ RL+ A +     I+ G+   V  YN LI+  C+F    A  ++   M  
Sbjct: 404 SILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P   T+ SLI+G  ++  +  +  L ++M++ GI P+V+++ +L+  L    K  E
Sbjct: 464 KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F +++   + P   T+N+++ G C++   D A  +   + + G VP+  TY  LI 
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GR+  A+  + +L       N + Y+ ++    +  +    L     M ++G   
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINM 643

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   +  +I   +K    K   D ++ M   G++ D V Y ++I+ Y KEG  + A+   
Sbjct: 644 DLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECW 703

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M  +    +  T+T L++GLCKAG +  A L  + M       N   Y C +D L K+
Sbjct: 704 DLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKE 763

Query: 371 GKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           G +  AI +  +M    + ++ T++ ++   CK  R   A+K+L    ++G+
Sbjct: 764 GNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGI 815



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 205/428 (47%), Gaps = 4/428 (0%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  +++ A  +++   R G +P++  YN LI++ C+    D    + + M    + P+ +
Sbjct: 342 KQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGI 401

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ LI    R+  L  ++   D M++ GI   V++YNSL++   + G    A  +F +M
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P   TF  +++G CK+     A +++  +  +G  P + T+  LI GLC   ++
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  EL +    P  +TY  +++   R+ K     E+L  M +KG   D + Y  +
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+     GR+ +A D+++ +    V+L+ + Y+ L++ YC+EG+L  A     EM ++G 
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D   H +LIDG  K  + K     L+ M+  G   +   Y  ++D   K+G    A  
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701

Query: 379 VFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
            ++ M  ++ F    TY+++++ LCKA  +  A  L      + V          +D L 
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761

Query: 435 HSGCRREA 442
             G  +EA
Sbjct: 762 KEGNMKEA 769



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 197/374 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N+ +   CK +R+ +A  +       G+  DVVTY  L+  +C+   F+AG  +
Sbjct: 258 LSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQL 317

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++ M E G SP     + L+ G  +   +  + +L+ ++   G  P+++ YN+L++ L +
Sbjct: 318 MDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D+A  ++ +M   +L P   T++I+++  C++   D A+  F  + + G    +  
Sbjct: 378 GGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA 437

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI G CK G L  A  +  E+ + G  P A T+T+++    ++ + +   ++ + M 
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T + + +  +I+      ++ EA++  +++V   ++   V+YN LI  YC++GK++
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LL++M ++G   D YT+  LI GLC  G +  A+  ++ ++K     N   Y+ ++
Sbjct: 558 KAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617

Query: 365 DRLGKDGKIDHAIN 378
               ++G++  A++
Sbjct: 618 HGYCQEGRLMEALS 631



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 196/434 (45%), Gaps = 9/434 (2%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           + +  GV PD  T + ++ + C+   F      +  M   G    +VTYN LI G  +  
Sbjct: 215 ESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGD 274

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +S ++++   +   G+  DV +Y +L+    +L + +   ++  +M+    +P  A  +
Sbjct: 275 RVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS 334

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++GL K    D+A  +   + + GFVP L  YN LI  LCK G L  A  +   +   
Sbjct: 335 GLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
              PN ITY+ ++    R+ +  + +     M + G     + Y ++I    K G L  A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                +M   GV+    ++ +LI+ YCK+ +++ A+ L ++M   G   + YT T LI G
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           LC    +  A    + + +         YN +++   +DGKID A  + E M     V D
Sbjct: 515 LCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA----- 442
           ++TY  ++  LC   R+  A   +    K  V++ +    A++ G    G   EA     
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASC 634

Query: 443 KKIQSKIRMAKISH 456
           + IQ  I M  + H
Sbjct: 635 EMIQRGINMDLVCH 648



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 158/363 (43%), Gaps = 36/363 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C  N++ +A  +  + +   + P  VTYN+LI+ YC+    D  + +L  M + G+
Sbjct: 512 ISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGL 571

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK------ 127
            PD  TY  LI+G      +S + D +D++ +  +  +   Y++L+H   Q G+      
Sbjct: 572 VPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALS 631

Query: 128 ---------------------------PDEAN--RVFQDMICGDLTPCTATFNIMLNGLC 158
                                      PD      + +DM    L P    +  M++   
Sbjct: 632 ASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYS 691

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K      A   +  +      P +VTY  L+ GLCKAG +  A  + K +  +   PN+I
Sbjct: 692 KEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI 751

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY   +    +    K  + +  AM  KG   +   +  +I  F K+GR  EAT  + +M
Sbjct: 752 TYGCFLDNLTKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEM 810

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             +G+  D V+Y+TLI  YC+ G + A+  L D M  +G E D   + +LI G C  G +
Sbjct: 811 TENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGEL 870

Query: 339 KGA 341
             A
Sbjct: 871 DKA 873



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 182/436 (41%), Gaps = 71/436 (16%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK   L  AE++ I+    GV P   T+  LI  YC+ +     + + N+M + GI+P+V
Sbjct: 446 CKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNV 505

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            T+ +LI+G    + ++ + +L DE++E  I P   +YN L+    + GK D+A  + +D
Sbjct: 506 YTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLED 565

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    L P T T+  +++GLC       A      L K       + Y+ L+ G C+ GR
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625

Query: 198 L-----------------------------------RTARWILKELGDSGHAPNAITYTT 222
           L                                   +T   +LK++ D G  P+ + YT+
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685

Query: 223 IMKCCFRNRKYKLGLEILS-------------------------AMKRKGYTF------- 250
           ++    +   +K   E                             M R G  F       
Sbjct: 686 MIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745

Query: 251 ---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y   +    K G +KEA      M+  G+  + V++N +I  +CK G+   A 
Sbjct: 746 VPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEAT 804

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L EM + G   D  T++ LI   C++GN+  +    + M   G + +L AYN ++   
Sbjct: 805 KVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGC 864

Query: 368 GKDGKIDHAINVFESM 383
             +G++D A  + + M
Sbjct: 865 CVNGELDKAFELRDDM 880



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 189/386 (48%), Gaps = 9/386 (2%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           +N L+     +S +  ++ ++  M    + P+V + ++L++ L ++ K      +F + +
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P   T + ++  +C+ +    A    R ++ +GF   +VTYN+LI GLCK  R+ 
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  + + LG  G A + +TY T++    R ++++ G++++  M   G++        ++
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               K G++ +A + + ++   G   ++  YN LIN  CK G L+ A LL   M      
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +  T++ILID  C++G +  A  + + M + G    + AYN +++   K G +  A ++
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
           F  M  K     + T++S++   CK  ++  A KL    + +G+        A++ GL  
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517

Query: 436 SGCRREAKK-----IQSKIRMAKISH 456
           +    EA +     ++ KI+  ++++
Sbjct: 518 TNKMAEASELFDELVERKIKPTEVTY 543



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 1/308 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C   R+ KA+  I D  +  V  + + Y+ L+  YCQ        +    M + GI
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           + D+V +  LI GA +        DLL +M + G+ PD   Y S++    + G   +A  
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            +  M+  +  P   T+  ++NGLCK    D A  +F+ +Q     P  +TY   +  L 
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G ++ A  +   +   G   N +T+  I++   +  ++    ++LS M   G   D  
Sbjct: 762 KEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCV 820

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  + + G +  +    + M+  G++ D+V+YN LI   C  G+L+ A+ L D+M
Sbjct: 821 TYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDM 880

Query: 314 EKQGFECD 321
            ++G   D
Sbjct: 881 LRRGIIPD 888



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 149/325 (45%), Gaps = 5/325 (1%)

Query: 113 WSYNSLMHCLF-QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           W  NSL+H L  +   P      F D         T  FN+++     +    +A+ + +
Sbjct: 120 WPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVK 179

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            +  +  +PE+ T + L+ GL K  +  T   +  E  ++G  P+  T + +++     +
Sbjct: 180 LMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELK 239

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            +    E +  M+  G+      Y  +I    K  R+ EA +    +   G+  D+V+Y 
Sbjct: 240 DFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYC 299

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           TL+  +C+  + EA   L+DEM + GF   +   + L+DGL K G I  A   +  + + 
Sbjct: 300 TLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF 359

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 407
           GF  NL  YN +++ L K G +D A  ++ +M +     +  TYS ++ + C++ RL  A
Sbjct: 360 GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDG 432
                  ++ G+     A  ++++G
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLING 444



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 54/101 (53%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  FCK  R  +A  ++ +    G+ PD VTY+ LI  YC+  +  A   + + M  
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN 847

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
            G+ PD+V YN LI G   N  L  + +L D+ML  GI PD
Sbjct: 848 RGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 206/407 (50%), Gaps = 4/407 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + +FC  NR+  A +++   ++LG  PD  T+  LI   C          + ++M 
Sbjct: 94  LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  P+VVTY +LI G  +    S ++ LL  M +    PDV  Y S++  L +  +  
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M+   ++P   T+  +++ LC      +   +   +     +P++V ++ ++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G++  A  I+  +   G  P+ +TYTT+M       +    +++   M RKG+ 
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  + KI ++ +A    E+M       D  +YNTL++  C  G+L+ A  L
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM  +G   D  T++IL+D LCK  +++ A   L+ +     + +++ YN I+D + +
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
            G+++ A ++F ++  K      +TY+ M+H LCK   L  A+KL +
Sbjct: 454 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 199/431 (46%), Gaps = 9/431 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   ++ +A  +    I  G  P+VVTY  LI+  C+  +  A   +L  M +    PD
Sbjct: 136 LCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPD 195

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y S+I    ++  ++ + +L  +M+  GI PD+++Y SL+H L  L +      +  
Sbjct: 196 VVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 255

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   + P    F+ +++ LCK      A  +   + + G  P++VTY  L+ G C   
Sbjct: 256 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 315

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +   +   G AP+ I+YTT++    +  K    + +   M RK +  D   Y 
Sbjct: 316 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 375

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++     +GRL++A     +MV  G   D+V+Y+ L++  CK   LE A  LL  +E  
Sbjct: 376 TLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEAS 435

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   + I+IDG+C+AG ++ AR     ++  G   ++  YN ++  L K G ++ A
Sbjct: 436 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 495

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV-- 430
             +F  M+      D  TY+++     +      A +LL   L  G     S    +V  
Sbjct: 496 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555

Query: 431 ---DGLRHSGC 438
              DGL  S C
Sbjct: 556 LSDDGLDQSSC 566



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV P+V T N+LI+++C        +++L ++ + G  PD  T+ +LI G      +  
Sbjct: 85  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 144

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M++ G  P+V +Y +L++ L ++G    A R+ + M  G+  P    +  +++
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TY  L+  LC     +    +L ++ +S   P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + ++T++    +  K     EI+  M ++G   D   Y T++        + EA    
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   D++SY TLIN YCK  K++ A  L +EM ++ +  D  T+  L+ GLC  
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G ++ A      M   G   +L  Y+ ++D L K+  ++ A+ + +++E      D   Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + ++  +C+A  L +A  L  +    G+         ++ GL   G   EA K+
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 178/369 (48%), Gaps = 4/369 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F + D   +  NR+      P +V +  L+    +    S  L L  +M   G+PP+V+
Sbjct: 33  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 92

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + N L++    L +   A  V   ++     P   TF  ++ GLC       AL +F  +
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              GF P +VTY  LI GLCK G    A  +L+ +      P+ + YT+I+    ++R+ 
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                + S M  +G + D F Y +++ A   +   K  T  + QMV   +  D+V ++T+
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CKEGK+  A+ ++D M ++G E D  T+T L+DG C    +  A    + M + GF
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 409
             ++ +Y  +++   K  KID A+ +FE M     + D+ TY++++H LC   RL  A  
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 410 LLLSCLKSG 418
           L    +  G
Sbjct: 393 LFHEMVARG 401



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 206/414 (49%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +V +  L+ +  +   +    ++  +M   G+ P+V T N LI      + +  +  +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  ++ +L+  L   GK  EA  +F  MI     P   T+  ++NGLCK
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R +++    P++V Y  +I  LCK  ++  A  +  ++   G +P+  T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT+++       ++K    +L+ M       D   + TV+ A  K G++ EA + ++ M+
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+Y TL++ +C + +++ A  + D M ++GF  D  ++T LI+G CK   I 
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M +  +  + + YN ++  L   G++  AI +F  M    ++ D  TYS ++
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +LCK   L  A  LL +   S +         ++DG+  +G    A+ + S +
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 467



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 4/358 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  +    +  G+ PD+ TY  L+ A C    +    T+LN+M  + I P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           DVV +++++    +   ++ + +++D M++ G+ PDV +Y +LM  HCL    + DEA +
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL--QSEMDEAVK 322

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+     P   ++  ++NG CK    D A+ +F  + +  ++P+  TYN L+ GLC
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+ +TY+ ++    +N   +  + +L A++      D  
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    + G L+ A D    + + G+   + +YN +I+  CK G L  A  L  EM
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +      D  T+  +  G  +      A   LE M   GF +++     +V+ L  DG
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 8/306 (2%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +  V   CK  ++ +A  I+   I+ GV PDVVTY  L+D +C     D    + + M
Sbjct: 268 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G +PDV++Y +LI G  +   +  ++ L +EM      PD  +YN+LMH L  +G+ 
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F +M+     P   T++I+L+ LCKN + + A+ + + ++     P++  YNI+
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFR---NRKYKLGLEILSAMK 244
           I G+C+AG L  AR +   L   G  P+  TY  ++   C R   N   KL +E    M 
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME----MD 503

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
               + DG  Y T+   F++      A   +E+M+  G   D+ +   L+ +   +G  +
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQ 563

Query: 305 AAYLLL 310
           ++  L+
Sbjct: 564 SSCFLM 569



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 100/190 (52%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T+  N  +   C   RL+ A A+  + +  G +PD+VTY++L+D+ C+    +    +L 
Sbjct: 371 TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK 430

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +  + ++PD+  YN +I G  R   L  + DL   +   G+ P VW+YN ++H L + G
Sbjct: 431 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRG 490

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             +EAN++F +M   D +P   T+N +  G  +N  T  A+++   +   GF  ++ T  
Sbjct: 491 LLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTT 550

Query: 187 ILIKGLCKAG 196
           +L++ L   G
Sbjct: 551 LLVEMLSDDG 560


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 28/453 (6%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C   +  +L + + I+   I  G  P    +N LI AYC+   +   Y +L +M + 
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQ 124
           G  P  V YN LI G   N  L  SLD+L+       EML+  +  +  + ++L  CL  
Sbjct: 399 GCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCG 457

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK ++A  + ++M+     P T+T++ ++  LC     DNA  +F  ++ +  VP++ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y ILI   CK G L+ AR    E+   G APN +TYT ++    + RK     E+   M 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--------------VTDGVQLD--IV 288
            +G   +   Y  +I    K G++++A     +M              + DG   D  I 
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y  L++  CK  K++ A  LLD M  +G E +   +  LIDG CK G +  A++    M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
           ++ G+  N+  Y+ ++DRL KD ++D A+ V   M       +   Y+ M+  LCK  + 
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             A +L+    + G         A++DG   +G
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG 790



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 17/390 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+  C  C A + EKA +II + +  G +PD  TY+ +I   C     D  + +   M+ 
Sbjct: 450 NLARC-LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS 508

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PDV TY  LI    +  LL  +    DEM+  G  P+V +Y +L+H   +  K   
Sbjct: 509 NHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSS 568

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE--------- 181
           AN +F+ M+     P   T+  +++G CK+   + A +++  ++ +  +P+         
Sbjct: 569 ANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD 628

Query: 182 -------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                  + TY  L+ GLCKA +++ AR +L  +   G  PN I Y  ++    +  K  
Sbjct: 629 GNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLD 688

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
               + + M  +GY  + + Y ++I    K  RL  A   + +M+ +    +++ Y  +I
Sbjct: 689 EAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMI 748

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK GK + AY L+  ME++G   +  T+T +IDG  KAG +      +  M   G  
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            N   Y  +++     G +D A  + + M+
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 213/493 (43%), Gaps = 66/493 (13%)

Query: 17  FCKANRLEKAEAII-IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CKA R  +A A+I  +  +L    D V Y  +I   C+   F+     L+RMR +   P
Sbjct: 277 LCKAGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP 332

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY  L+ G  R   L     +L  M+  G  P    +NSL+H   + G    A ++ 
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYT-------------------------------- 163
           + M      P    +NI++ G+C N                                   
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452

Query: 164 ---------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                    + A  + R +   GF+P+  TY+ +I  LC A ++  A  + +E+  +   
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TYT ++    +    +   +    M R G   +   Y  +I A++K  ++  A + 
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG--------FECDK---- 322
            E M+++G   ++V+Y  LI+ +CK G++E A  +   M            F+ D     
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 323 ----YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T+  L+DGLCKA  +K AR  L+ M+  G + N   Y+ ++D   K GK+D A  
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF  M  +    + +TYSS++  L K KRL  A K+L   L++           ++DGL 
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 435 HSGCRREAKKIQS 447
             G   EA ++ S
Sbjct: 753 KVGKTDEAYRLMS 765



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 195/467 (41%), Gaps = 61/467 (13%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------------- 49
           S R+ N  +  +C++     A  ++      G  P  V YN+LI                
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLE 427

Query: 50  ----------DAY---------------CQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
                     DA+               C    F+  Y+I+  M   G  PD  TY+ +I
Sbjct: 428 LAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
                 S +  +  L +EM    + PDV++Y  L+    ++G   +A + F +M+     
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCA 547

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T+  +++   K R   +A  +F  +   G +P +VTY  LI G CK+G++  A  I
Sbjct: 548 PNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 205 LKELG--------------DSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
              +               D G+   PN  TY  ++    +  K K   ++L  M  +G 
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  F K+G+L EA     +M   G   ++ +Y++LI+   K+ +L+ A  
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L  M +     +   +T +IDGLCK G    A   +  M + G   N+  Y  ++D  G
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K GK+D  + +   M  K    +  TY  ++++ C A  L  A +LL
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 44/408 (10%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+LI   C+   ++     L R+++ G  P  +TYN+L+        L  +  +  EM +
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEA------------NRVFQDMICG------------ 141
            G   D ++    +H L + G+  EA              ++  MI G            
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320

Query: 142 --------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
                      P   T+ I+L G  + R      R+   +   G  P    +N LI   C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDG 252
           ++G    A  +LK++GD G  P  + Y  ++     N K    L++L  A K  G   D 
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDA 439

Query: 253 ------FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                      +       G+ ++A   + +M++ G   D  +Y+ +I L C   K++ A
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +LL +EM+      D +T+TILID  CK G ++ AR   + M + G   N+  Y  ++  
Sbjct: 500 FLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHA 559

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
             K  K+  A  +FE M     + +  TY++++   CK+ ++  A ++
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 173/416 (41%), Gaps = 50/416 (12%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI    RN L + +L+ L  + ++G  P   +YN+L+    +  + D A  V ++M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
                   T    ++ LCK      AL +   ++K  F  + V Y  +I GLC+A     
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A   L  +  S   PN +TY  ++  C R R+      ILS M  +G       + ++I 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------------------- 294
           A+ + G    A   +++M   G Q   V YN LI                          
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 295 ------------NL---YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                       NL    C  GK E AY ++ EM  +GF  D  T++ +I  LC A  + 
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSM 394
            A L  E M       ++  Y  ++D   K G +  A   F+ M V+D       TY+++
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM-VRDGCAPNVVTYTAL 556

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +H   KA+++ SA++L    L  G         A++DG   SG   +A +I +++R
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMR 612



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 38/306 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L++A+ +       G  P+V TY+ LID   +    D    +L+RM E   +P+
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ Y  +I G  +      +  L+  M E G  P+V +Y +++    + GK D+   + +
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-----KH---------GF---- 178
            M      P   T+ +++N  C     D+A ++   ++     KH         GF    
Sbjct: 801 QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREF 860

Query: 179 ---------------VPELVTYNILIKGLCKAGRLRTARWILKELGD--SGHAPNAITYT 221
                          VP +  Y ILI   CKAGRL  A  + KE+    S  A +   Y+
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYS 920

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQM 278
           ++++      K     E+ + M ++G   +   +  ++   ++I R +EA   +D + QM
Sbjct: 921 SLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQM 980

Query: 279 VTDGVQ 284
           + D V+
Sbjct: 981 MVDFVR 986



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 7/232 (3%)

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y+ L++ L   G  R     L+E+ D            +++ C RN  + + LE L  +
Sbjct: 164 VYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRL 223

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  GY      Y  ++  F++  RL  A     +M   G  +D  +    ++L CK G+ 
Sbjct: 224 KDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRW 283

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L+   EK+ F+ D   +T +I GLC+A   + A   L  M       N+  Y  +
Sbjct: 284 REALALI---EKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLL 411
           +    +  ++     +   M  +  +     ++S++H  C++     A KLL
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 210/449 (46%), Gaps = 44/449 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   C  N ++ A +++ D  + G +P+ + Y  LI A  Q         +L  M   
Sbjct: 223 IVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  PDV T+N +I G  + + +  +  L+D ML  G  PD  +Y  L+H L ++GK +EA
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342

Query: 132 NRVF--------------------------------QDMICGDLTPCTATFNIMLNGLCK 159
            ++                                 + MI     P   T+NI+++GLCK
Sbjct: 343 RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +   + + G  P ++TY IL+ GLCKAG L  A  +L E+   G   N++ 
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R  K  + L +LS M  KG   D F Y ++I    K+ R+ EA      M+
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 338
            DG   + V+YNTLI+   + G  + A  L+++M  +G   DK T+  LI   CK GNI 
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-------VKDSFTY 391
           KG  L+ E M   G  ++  + N +++ L K GK+D+A   FE +        V D  TY
Sbjct: 583 KGLELY-EQMIMDGLGADTISCNIMINGLCKVGKVDNA---FEFLRDAINRGFVPDIVTY 638

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +S+++ LCK  R+  A  L       GVR
Sbjct: 639 NSVLNGLCKVGRIKEALNLFDRLQVEGVR 667



 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 198/420 (47%), Gaps = 36/420 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA---------------- 60
            CK N++  A  ++   +  G  PD +TY  L+   C+    +                 
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAIL 357

Query: 61  -----GYTILNRMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
                GY +  +++EA           G  PD+ TYN L+ G  +   LS + DL++EM 
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G  P+V +Y  L++ L + G  +EA  V  +M    LT  +  +N ++  LC+     
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            AL +   +   G  P+L TYN LI GLCK  R+  A  +   +   G   N +TY T++
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               R   ++  L +++ M  +G T D   Y  +I AF K+G +++  +  EQM+ DG+ 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D +S N +IN  CK GK++ A+  L +   +GF  D  T+  +++GLCK G IK A   
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCK 400
            + +   G   +   YN  +    K+G ++ A + F    E+  V  + T++ +V+ L K
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 176/369 (47%), Gaps = 40/369 (10%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   SY+ ++  L     P  A  VF DM+   ++P   TF I++  LC     D+A  +
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            R + KHG VP  + Y  LI  L +  ++  A  +L+E+   G  P+  T+  ++    +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 230 NRKYKLGLEILSAMKRKGYTFD----GF---GYC------------------------TV 258
             K     +++  M  +G+  D    GF   G C                        T+
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTL 360

Query: 259 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           I  +V  G+LKEA  ++ E M+  G Q DI +YN L++  CKEG L  A  L++EM ++G
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E +  T+ IL++GLCKAG ++ A L L  M+  G   N   YNC++  L +  K+  A+
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           N+   M  K    D FTY+S+++ LCK  R+  A +L  + L  G      A     + L
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA----VANNVTYNTL 536

Query: 434 RHSGCRREA 442
            H+  RR A
Sbjct: 537 IHALLRRGA 545



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 158/327 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   L  A  ++ +  R G  P+V+TY +L++  C+    +    +L+ M  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ + V YN LI    R   +  +L+LL EM   G  PD+++YNSL++ L ++ + DE
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F +M+         T+N +++ L +      AL +   +   G   + +TYN LIK
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G +     + +++   G   + I+   ++    +  K     E L     +G+  
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V+    K+GR+KEA +  +++  +GV+ D  +YNT I+  CKEG +  A    
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFF 693

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGN 337
               + GF     T  +L+  L K  N
Sbjct: 694 YRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 139/309 (44%), Gaps = 35/309 (11%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +++ + N  +C  C+  ++  A  ++ +    G  PD+ TYN LI   C+    D  + +
Sbjct: 458 INSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRL 517

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M   G   + VTYN+LI    R      +L L+++ML  G   D  +YN L+    +
Sbjct: 518 FHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G  ++   +++ MI   L   T + NIM+NGLCK    DNA    R     GFVP++VT
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVT 637

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN ++ GLCK GR++ A  +   L   G  P+A TY T                      
Sbjct: 638 YNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTF--------------------- 676

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                         I+   K G + +A  +  + + +G     +++N L+    K+   E
Sbjct: 677 --------------ISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQE 722

Query: 305 AAYLLLDEM 313
             + +LDE+
Sbjct: 723 NNFFVLDEL 731


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 4/437 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +   C+  +L  A + +   I+LG  PD VT++ LI+  C          +++RM 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  P ++T N+L+ G   N  +S ++ L+D M+E G  P+  +Y  ++  + + G+  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M    +      ++I+++GLCK+   DNA  +F  ++  GF  +++ Y  LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C AGR      +L+++      P+ + ++ ++ C  +  K +   E+   M ++G +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F K  +L +A   ++ MV+ G   +I ++N LIN YCK   ++    L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M  +G   D  T+  LI G C+ G ++ A+   + M       ++ +Y  ++D L  
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+ + A+ +FE +E      D   Y+ ++H +C A ++  A  L  S    GV+     
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 426 QKAVVDGLRHSGCRREA 442
              ++ GL   G   EA
Sbjct: 530 YNIMIGGLCKKGSLSEA 546



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 205/420 (48%), Gaps = 4/420 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P ++ ++ L     +   +D    +  +M   GI+ ++ T + +I    R   LS +   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + +++++G  PD  ++++L++ L   G+  EA  +   M+     P   T N ++NGLC 
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N    +A+ +   + + GF P  VTY  ++K +CK+G+   A  +L+++ +     +A+ 
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ I+    ++        + + M+ KG+  D   Y T+I  F   GR  +    +  M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              +  D+V+++ LI+ + KEGKL  A  L  EM ++G   D  T+T LIDG CK   + 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A   L+ M   G   N+  +N +++   K   ID  + +F  M     V D+ TY++++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              C+  +L  A +L    +   VR    + K ++DGL  +G   +A +I  KI  +K+ 
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 9/396 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     +I +   CK   L+ A  +  +    G   D++ Y  LI  +C    +D G  
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M +  I+PDVV +++LI    +   L  + +L  EM++ GI PD  +Y SL+    
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+AN +   M+     P   TFNI++NG CK    D+ L +FR +   G V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI+G C+ G+L  A+ + +E+      P+ ++Y  ++     N + +  LEI   +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++     D   Y  +I       ++ +A D    +   GV+ D+ +YN +I   CK+G L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A LL  +ME+ G   +  T+ ILI      G+   +   +E + + GF  +       
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFA 603

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 399
           +  L +  K  H           D FT+++++   C
Sbjct: 604 LSTLARMLKAGHE---------PDVFTFTTLLRPFC 630



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 168/342 (49%), Gaps = 24/342 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N+L+KA  ++   +  G  P++ T+N+LI+ YC+    D G  +  +M   G+  D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L  + +L  EM+   + PD+ SY  L+  L   G+P++A  +F+
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    +      +NI+++G+C     D+A  +F  L   G  P++ TYNI+I GLCK G
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK--------------------CCFR--NRKYK 234
            L  A  + +++ + GH+PN  TY  +++                    C F       +
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLR 601

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFV--KIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
             L  L+ M + G+  D F + T++  F   +   + +A    + M   G + ++V+YNT
Sbjct: 602 FALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNT 661

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +I        +     +LD+M ++G + +  T +  I GLCK
Sbjct: 662 VIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCK 703



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 1/389 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V   C   ++  A  +I   +  G  P+ VTY  ++   C+         +L +M 
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  I  D V Y+ +I G  ++  L  + +L +EM   G   D+  Y +L+      G+ D
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +  ++ +DMI   +TP    F+ +++   K      A  + + + + G  P+ VTY  LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK  +L  A  +L  +   G  PN  T+  ++    +      GLE+   M  +G  
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  F ++G+L+ A +  ++MV+  V+ DIVSY  L++  C  G+ E A  +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +++EK   E D   + I+I G+C A  +  A      +   G   +++ YN ++  L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHNL 398
            G +  A  +F  ME +D  + +   +N+
Sbjct: 540 KGSLSEADLLFRKME-EDGHSPNGCTYNI 567



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A+ +F+ + +    P L+ ++ L   + +  +      + K++   G A N  T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + CC R RK  L    +  + + GY  D   + T+I      GR+ EA + +++MV  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +  +++ N L+N  C  GK+  A LL+D M + GF+ ++ T+  ++  +CK+G    A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L  M +     +   Y+ I+D L KDG +D+A N+F  ME+K    D   Y++++   C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A R    +KLL   +K  +     A  A++D     G  REA+++  ++    IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 15/223 (6%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   + NI +   C A++++ A  +       GV PDV TYN++I   C+  S      
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M E G SP+  TYN LI         + S  L++E+   G   D  +    +  L 
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC--KNRYTDNALRMFRGLQKHGFVPE 181
           ++ K      VF             TF  +L   C  +N    +A  +F+ ++  G+ P 
Sbjct: 609 RMLKAGHEPDVF-------------TFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           +VTYN +IKGL     +     +L ++ + G  PNA+T +T +
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFI 698


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 223/450 (49%), Gaps = 4/450 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+A  +++A  +     + G++ DV TY++LID + +         +L  M  
Sbjct: 275 NVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFS 334

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P  V Y +LI G  R      +  + +EML  G+  ++++YN+L+  + + G  ++
Sbjct: 335 KGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEK 394

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +  +MI   + P T T+N M+ G  K + T     +   ++K   VP   T  ++I 
Sbjct: 395 ADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIIN 454

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G +  A  + + +   G  PNA+ YTT++K   +  +++  + IL  M +KG   
Sbjct: 455 GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +VI    K  +++EA DY+ +M+  G++ ++ +Y  LI+ YCK G+++ A    
Sbjct: 515 DVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYF 574

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM   G   +    T LIDG CK G+   A      M       ++  Y+ ++  L ++
Sbjct: 575 KEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRN 634

Query: 371 GKIDHAINVF-ESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+  A+ +  E +E   V D FTY+S++   CK   +  A +L     + G+       
Sbjct: 635 GKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITY 694

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
            A+++GL  +G    A+++   I    ++H
Sbjct: 695 NALINGLCKAGEIERARELFDGIPGKGLAH 724



 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 218/446 (48%), Gaps = 5/446 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+    N  V   CK   +EKA+A++ + I +G+ PD  TYN +I+ Y +  +      
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKD 432

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M+++ + P   T   +I G  R+  +  +  + + M+ +G+ P+   Y +L+    
Sbjct: 433 LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHV 492

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q G+  EA R+ + M    + P    +N ++ GLCK+R  + A      + + G  P + 
Sbjct: 493 QEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVY 552

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  LI G CK+G ++ A    KE+   G APN +  T ++    +         I   M
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +    D   Y  +I   ++ G+L+ A + + + +  G+  D+ +YN++I+ +CK+G +
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A+ L + M ++G   +  T+  LI+GLCKAG I+ AR   + +   G   N   Y  I
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K G +  A  +F+ M +K    DSF YS+++    K      A  L L  ++ G 
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
               S+  A++DG   SG   EA ++
Sbjct: 793 AS-TSSLNALMDGFCKSGKVIEANQL 817



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 198/435 (45%), Gaps = 9/435 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK+ ++E+A+  +++ I  G+ P+V TY  LI  YC+             M  
Sbjct: 520 NSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG 579

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P+ V   +LI G  +    + +  +   ML   + PDV +Y++L+H L + GK   
Sbjct: 580 CGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQG 639

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  + +   L P   T+N +++G CK      A ++   + + G  P ++TYN LI 
Sbjct: 640 AMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALIN 699

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG +  AR +   +   G A NA+TY TI+    ++        +   M  KG   
Sbjct: 700 GLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPP 759

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  +I    K G  ++A     + V  G      S N L++ +CK GK+  A  LL
Sbjct: 760 DSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLL 818

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++M  +  + D  T+TILID  CK G +K A      M K     N   Y  ++      
Sbjct: 819 EDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA 878

Query: 371 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+      +F+ M  KD      T+S M+    K        KL+   LK G  + K+  
Sbjct: 879 GRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC 938

Query: 427 KAVVDGLRHSGCRRE 441
             ++D L    CR+E
Sbjct: 939 HVLIDPL----CRKE 949



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 187/399 (46%), Gaps = 4/399 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           V + +LID Y +   FD   +     +  G    ++  N L++   + + L       + 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           MLE  +  DV++Y  L++  F+ G   E  R+  +M     +P   T+N+++ GLC+   
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D A  + + + K G V ++ TY+ILI G  K  R   A+ +L+E+   G  P  + YT 
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R         +   M  +G   + F Y  ++    K G +++A   + +M+  G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ D  +YN +I  Y KE        LL EM+K       YT  ++I+GLC+ G+I+ A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
              E M  +G   N   Y  ++    ++G+   A+ + + M+ K    D   Y+S++  L
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           CK++++  A   L+  ++ G++       A++ G   SG
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 201/440 (45%), Gaps = 39/440 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KAN+LE         +   VL DV TY  LI+A+ +  +   G  +L  M E G SP +V
Sbjct: 213 KANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLV 272

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TYN +I G  R   +  + +L   M + G+  DV++Y+ L+    +  +  EA  + ++M
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM 332

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P    +  +++G  +   +  A R+   +   G    L TYN L+KG+CK G +
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------------ 246
             A  +L E+   G  P+  TY  +++   + +      ++LS MK+             
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMI 452

Query: 247 -----------------------GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                                  G   +   Y T+I   V+ GR +EA   ++ M   GV
Sbjct: 453 INGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           Q D++ YN++I   CK  K+E A   L EM ++G + + YT+  LI G CK+G ++ A  
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
           + + M   G   N      ++D   K+G    A ++F  M  +    D  TYS+++H L 
Sbjct: 573 YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 400 KAKRLPSASKLLLSCLKSGV 419
           +  +L  A +LL   L+ G+
Sbjct: 633 RNGKLQGAMELLSEFLEKGL 652



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 202/439 (46%), Gaps = 40/439 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK+  ++ A+    + +  G+ P+ V    LID YC+  S     +I   M    + PD
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY++LI G  RN  L  +++LL E LE G+ PDV++YNS++    + G   +A ++ +
Sbjct: 621 VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHE 680

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    ++P   T+N ++NGLCK    + A  +F G+   G     VTY  +I G CK+G
Sbjct: 681 YMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSG 740

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT------- 249
            L  A  +  E+   G  P++  Y+ ++  C +    +  L +     +KG+        
Sbjct: 741 NLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNA 800

Query: 250 -FDGF--------------------------GYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
             DGF                           Y  +I    K G LKEA  +   M    
Sbjct: 801 LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN 860

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGA 341
           +  + ++Y  L++ Y   G+    + L DEM  +  E D  T +++ID   K G+ +K  
Sbjct: 861 LMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTL 920

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
           +L ++ M K G + +    + ++D L +   +   + V E +E +       T S++V  
Sbjct: 921 KL-VDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRC 979

Query: 398 LCKAKRLPSASKLLLSCLK 416
             KA ++  A+++L S ++
Sbjct: 980 FHKAGKMDGAARVLKSMVR 998



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 3/304 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +   CKA  +E+A  +  DGI   G+  + VTY  +ID YC+  +    + + + M 
Sbjct: 695 NALINGLCKAGEIERARELF-DGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD   Y++LI G  +      +L L  E ++ G      S N+LM    + GK  
Sbjct: 754 LKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVI 812

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EAN++ +DM+   + P   T+ I+++  CK  +   A + F  +QK   +P  +TY  L+
Sbjct: 813 EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G   AGR      +  E+      P+ +T++ ++    +   +   L+++  M +KG  
Sbjct: 873 SGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGN 932

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                   +I    +   + E    +E++   G+ L + + +TL+  + K GK++ A  +
Sbjct: 933 VSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARV 992

Query: 310 LDEM 313
           L  M
Sbjct: 993 LKSM 996



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 102/215 (47%)

Query: 3    GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            G  ST  LN  +  FCK+ ++ +A  ++ D +   V PD VTY +LID +C+        
Sbjct: 791  GFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850

Query: 63   TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
                 M++  + P+ +TY +L++G       S    L DEM+   I PD  +++ ++   
Sbjct: 851  QFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910

Query: 123  FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             + G   +  ++  DM+           +++++ LC+  +    L++   +++ G    L
Sbjct: 911  LKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSL 970

Query: 183  VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
             T + L++   KAG++  A  +LK +      P++
Sbjct: 971  ATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDS 1005


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 1/366 (0%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   CK  RL+ A +   +    G+  +V TYN LI ++C F  +D G  +L  M   
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            I+P+VVT+++LI    +   L+ + DL +EM+  GI P+  +YNSL++ L    + DEA
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N++   M+     P   T+NI++NG CK +  D+ +R+FR +   G + + VTY+ LI+G
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQG 449

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C++ +L  A+ + +E+   G  P  +TY  ++     N + +  L IL  M +     D
Sbjct: 450 FCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I       ++ +A      + + GV+ DI SYN +++  CK   L  A  L  
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFR 569

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M++ G+E D  T+  LI    +  +I  +   +E M + GF S+      ++D L   G
Sbjct: 570 KMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS-G 628

Query: 372 KIDHAI 377
           ++D + 
Sbjct: 629 ELDKSF 634



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 200/428 (46%), Gaps = 4/428 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V   C  +R+ +A  +I   +  G  P+  TY  +++  C+  +  +   +L +M 
Sbjct: 198 LNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKME 257

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              I P VVTY  +I    ++  L  +L    EM   GI  +V++YNSL+      G+ D
Sbjct: 258 HRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWD 317

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +  ++ +DMI   +TP   TF+ +++ L K      A  ++  +   G  P  +TYN LI
Sbjct: 318 DGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLI 377

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC   RL  A  ++  +   G  P+  TY  ++    + ++   G+ +   M  +G  
Sbjct: 378 YGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI 437

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  F +  +L  A    ++MV+ GV   I++Y  L++  C  G+LE A  +
Sbjct: 438 ADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGI 497

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LD+M K   E D   + I+I G+C A  +  A      +   G   ++++YN ++  L K
Sbjct: 498 LDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK 557

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
              +  A  +F  M+      D  TY++++    +   + ++ +L+    + G     S 
Sbjct: 558 RSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST 617

Query: 426 QKAVVDGL 433
            K V+D L
Sbjct: 618 VKIVMDML 625



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 207/435 (47%), Gaps = 4/435 (0%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           + A A+    +R   LP V+ +N L     +   +D    +  +M   GI+ D+ T N +
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           I    R   L  +   + ++ ++G  P+  ++N+L++ L   G+  EA  +   M+    
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P   T N ++NGLC       A+ +   +  +G  P   TY  ++  +CK+G   +A  
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +L+++      P+ +TYT I+    ++ +    L   S M+ KG   + F Y ++I +F 
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
             GR  +    +  M+T  +  ++V+++ LI+   KEGKL  A  L +EM  +G E +  
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  LI GLC    +  A   ++ M   G D ++  YN +++   K  ++D  + +F  M
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
            ++    D+ TYS+++   C++++L  A K+    +  GV         ++DGL  +G  
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491

Query: 440 REAKKIQSKIRMAKI 454
            EA  I  ++   K+
Sbjct: 492 EEALGILDQMHKCKM 506



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 209/445 (46%), Gaps = 4/445 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  +L  A + +    +LG  P+ VT+N L++  C          +++ M 
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +   PD++T N+++ G      +S ++DL+  M+  G  P+ ++Y  +++ + + G   
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M    + P   T+ I+++ LCK+   D+AL  F  ++  G    + TYN LI
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
              C  GR      +L+++      PN +T++ ++    +  K     ++ + M  +G  
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y ++I       RL EA   M+ MV+ G   DI +YN LIN +CK  +++    L
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M  +G   D  T++ LI G C++  +  A+   + M   G    +  Y  ++D L  
Sbjct: 428 FRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCD 487

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+++ A+ + + M       D   Y+ ++H +C A ++  A  L  S    GV+    +
Sbjct: 488 NGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQS 547

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              ++ GL       EA  +  K++
Sbjct: 548 YNIMLSGLCKRSSLSEADALFRKMK 572



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 41/325 (12%)

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  +FQ M+     P    FN +   L + +  D  L + + ++  G   +L T N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKR 245
           I+I   C+  +L  A   + ++   G+ PN +T+ T++   C   R ++  +E++  M  
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFE-AVELVDCMVL 188

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
             +  D     T++       R+ EA D + +M+ +G Q +  +Y  ++N  CK G   +
Sbjct: 189 SQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN---- 361
           A  LL +ME +  +    T+TI+ID LCK G +  A      M   G  +N+  YN    
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308

Query: 362 -------------------------------CIVDRLGKDGKIDHAINVFESMEVK---- 386
                                           ++D L K+GK+  A +++  M  +    
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++ TY+S+++ LC  KRL  A++++
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMM 393



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 4/138 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   + NI +   C AN+++ A ++       GV  D+ +YN+++   C+  S      
Sbjct: 507 ELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADA 566

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M+E G  PD  TYN+LI    R + ++ S+ L++EM   G   D  +   +M  L 
Sbjct: 567 LFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML- 625

Query: 124 QLGKPDEANRVFQDMICG 141
                 E ++ F +M+ G
Sbjct: 626 ---SSGELDKSFLNMLSG 640


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 210/449 (46%), Gaps = 44/449 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   C  N ++ A +++ D  + G +P+ + Y  LI A  Q         +L  M   
Sbjct: 223 IVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVM 282

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  PDV T+N +I G  + + +  +  L+D ML  G  PD  +Y  L+H L ++GK +EA
Sbjct: 283 GCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA 342

Query: 132 NRVF--------------------------------QDMICGDLTPCTATFNIMLNGLCK 159
            ++                                 + MI     P   T+NI+++GLCK
Sbjct: 343 RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +   + + G  P ++TY IL+ GLCKAG L  A  +L E+   G   N++ 
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R  K  + L +LS M  KG   D F Y ++I    K+ R+ EA      M+
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 338
            DG   + V+YNTLI+   + G  + A  L+++M  +G   DK T+  LI   CK GNI 
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-------VKDSFTY 391
           KG  L+ E M   G  ++  + N +++ L K GK+D+A   FE +        V D  TY
Sbjct: 583 KGLELY-EQMIMDGLGADTISCNIMINGLCKVGKVDNA---FEFLRDAINRGFVPDIVTY 638

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +S+++ LCK  R+  A  L       GVR
Sbjct: 639 NSVLNGLCKVGRIKEALNLFDRLQVEGVR 667



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 197/420 (46%), Gaps = 36/420 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA---------------- 60
            CK N++  A  ++   +  G  PD +TY  L+   C+    +                 
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAIL 357

Query: 61  -----GYTILNRMREA-----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
                GY +  +++EA           G  PD+ TYN L+ G  +   LS + DL++EM 
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G  P+V +Y  L++ L + G  +EA  V  +M    LT  +  +N ++  LC+     
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            AL +   +   G  P+L TYN LI GLCK  R+  A  +   +   G   N +TY T++
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               R   ++  L +++ M  +G T D   Y  +I AF K+G +++  +  EQM+ DG+ 
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D +S N +IN  CK GK++ A+  L +   +GF  D  T+  +++GLCK G IK A   
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCK 400
            + +   G   +   YN  +    K+G ++ A   F    E+  V  + T++ +V+ L K
Sbjct: 658 FDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLK 717



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 176/369 (47%), Gaps = 40/369 (10%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   SY+ ++  L     P  A  VF DM+   ++P   TF I++  LC     D+A  +
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            R + KHG VP  + Y  LI  L +  ++  A  +L+E+   G  P+  T+  ++    +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 230 NRKYKLGLEILSAMKRKGYTFD----GF---GYC------------------------TV 258
             K     +++  M  +G+  D    GF   G C                        T+
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTL 360

Query: 259 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           I  +V  G+LKEA  ++ E M+  G Q DI +YN L++  CKEG L  A  L++EM ++G
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            E +  T+ IL++GLCKAG ++ A L L  M+  G   N   YNC++  L +  K+  A+
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           N+   M  K    D FTY+S+++ LCK  R+  A +L  + L  G      A     + L
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA----VANNVTYNTL 536

Query: 434 RHSGCRREA 442
            H+  RR A
Sbjct: 537 IHALLRRGA 545



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 159/327 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   L  A  ++ +  R G  P+V+TY +L++  C+    +    +L+ M  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ + V YN LI    R   +  +L+LL EM   G  PD+++YNSL++ L ++ + DE
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F +M+         T+N +++ L +      AL +   +   G   + +TYN LIK
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G +     + +++   G   + I+   ++    +  K     E L     +G+  
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +V+    K+GR+KEA +  +++  +GV+ D  +YNT I+  CKEG +  A L  
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFF 693

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGN 337
               + GF     T  +L+  L K  N
Sbjct: 694 YRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 113/220 (51%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +++ + N  +C  C+  ++  A  ++ +    G  PD+ TYN LI   C+    D  + +
Sbjct: 458 INSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRL 517

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M   G   + VTYN+LI    R      +L L+++ML  G   D  +YN L+    +
Sbjct: 518 FHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCK 577

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G  ++   +++ MI   L   T + NIM+NGLCK    DNA    R     GFVP++VT
Sbjct: 578 VGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVT 637

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           YN ++ GLCK GR++ A  +   L   G  P+A TY T +
Sbjct: 638 YNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 210/449 (46%), Gaps = 23/449 (5%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +   C+ +R+++A  +        V PD  +Y +LID   +    +    +  +
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +  +G++P  V Y SLI G    +    + +L  +M   G PP   +YN ++    + G 
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  + + MI     P   T+N +++GLCK+   + AL +F  +++ G  P   ++N 
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468

Query: 188 LIKGLCKA---------GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           +I GLC+          G+L  A  +LK + D GH P+ +TY+T++       +      
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M ++          T+I    K GR+KEA + ++ MV+ G   D+V+YNTL++ +C
Sbjct: 529 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           + G+ E A  LL +M  +G   +  T+T L+ GLCKA  +  A      M   G   NL 
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 648

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++      G++D  + +F  M       D   Y ++   LCK+ R    S   L  
Sbjct: 649 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR----SARALEI 704

Query: 415 LKSGVRILKSAQ------KAVVDGLRHSG 437
           L+ G   L+S        +  VDGL  +G
Sbjct: 705 LREGRESLRSEAWGDEVYRFAVDGLLEAG 733



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 198/423 (46%), Gaps = 21/423 (4%)

Query: 17  FCKANRLEKAEAIIID------GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            CKA R+E+A  +  D             P +  YN++I   CQ    D    +  +M E
Sbjct: 257 LCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNE 316

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPD  +Y  LI G  +   L+ + +L  ++L  G+ P   +Y SL+H L      D+
Sbjct: 317 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 376

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F DM      P   T+N+M++  CK    + A  + + + + G VP++VTYN ++ 
Sbjct: 377 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----------KCCFRNRKYKLGLEIL 240
           GLCK+ R+  A  +  E+   G  PN  ++ TI+          + C R  K      +L
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRG-KLDEAFRLL 495

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M   G+  D   Y T+I+    I R+ +A   +E MV    +  +V+ NTLI+  CK 
Sbjct: 496 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKA 555

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+++ A  +LD M   G   D  T+  L+ G C+AG  + AR  L  M   G   N+  Y
Sbjct: 556 GRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTY 615

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             +V  L K  ++  A  VF  M+      + FTY++++   C A ++    KL    + 
Sbjct: 616 TALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC 675

Query: 417 SGV 419
           +G+
Sbjct: 676 AGI 678



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 213/471 (45%), Gaps = 22/471 (4%)

Query: 1   MFGKLSTRLLN-------ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           MF K++ R ++       I +    KA +L  A  +    +  GV P  V Y  LI   C
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
              SFD    +   M   G  P  VTYN +I  + +  +L  + DL+ +M+E G  PDV 
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA------- 166
           +YN++M  L +  + +EA  +F +M     TP   + N ++ GLC+    D A       
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489

Query: 167 --LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
              R+ + +   G VP++VTY+ LI GLC   R+  AR +L+++      P  +T  T++
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  + K   E+L AM   G + D   Y T++    + G+ + A + +  MV  G+ 
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            ++V+Y  L++  CK  +L  A  +  +M+  G   + +T+T LI G C AG + G    
Sbjct: 610 PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 669

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESM--EVKDSFTYSSMVHNL 398
              M   G   +   Y  +   L K G+   A+ +     ES+  E      Y   V  L
Sbjct: 670 FGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGL 729

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +A ++  A   +   ++ G         ++V GL  SG   EA+ +  +I
Sbjct: 730 LEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 220/457 (48%), Gaps = 44/457 (9%)

Query: 11  NICVCTFCKANR----LEKAEAIIIDGIRL--GVLPDVVTYNMLIDAYCQFVSFDAGY-- 62
           NI V   CKA R    LE A  +    I L  G L  V+   M           D+G   
Sbjct: 149 NIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLM-----------DSGRID 197

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
             L   RE    P +VT N L+ G      +  + +LL  M +    PD  SY +++  L
Sbjct: 198 EALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGL 257

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTAT------FNIMLNGLCKNRYTDNALRMFRGLQKH 176
            + G+ +EA R+F D      +  +++      +NI++ GLC+N   D A++MF  + + 
Sbjct: 258 CKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNER 317

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
              P+  +Y ILI GL KAG+L  AR + ++L  SG  P+ + YT+++        +   
Sbjct: 318 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 377

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            E+ + M R+G       Y  +I A  K G L+EA D +++M+ DG   D+V+YNT+++ 
Sbjct: 378 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 437

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA----------RLHLE 346
            CK  ++E A LL +EME+ G   ++ +H  +I GLC+   I  A          RL L+
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRL-LK 496

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAK 402
            M   G   ++  Y+ ++  L    ++D A ++ E M  +       T ++++H LCKA 
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 556

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           R+  A ++L + + SG    +S      + L H  CR
Sbjct: 557 RIKEAREVLDAMVSSG----QSPDVVTYNTLVHGHCR 589



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 182/376 (48%), Gaps = 17/376 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------DAYCQFVSFDAGYTILNR 67
            CK++R+E+A  +  +  RLG  P+  ++N +I         D  CQ    D  + +L R
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKR 497

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G  PDVVTY++LI+G    + +  +  LL++M++    P V + N+L+H L + G+
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA  V   M+    +P   T+N +++G C+   T+ A  +   +   G  P +VTY  
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GLCKA RL  A  +  ++  SG APN  TYT ++       +   GL++   M   G
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYM----EQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            + D   Y T+ A   K GR   A + +    E + ++    ++  Y   ++   + GK+
Sbjct: 678 ISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLEAGKM 735

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL--EAYN 361
           E A   + +M + G          L+ GLCK+G    AR  LE +  + +      +A  
Sbjct: 736 EMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAAK 795

Query: 362 CIVDRLGKDGKIDHAI 377
            + + +GK  +I+ A+
Sbjct: 796 FVEEMVGKGYEIEDAV 811



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/561 (21%), Positives = 213/561 (37%), Gaps = 153/561 (27%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P  + +  +I  +C          I + M E   SP    YN LI   ++       
Sbjct: 5   GIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAV 63

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT------- 149
             ++  M++ G  PD +++ +++  L + GK DEA  V  +M    + P  AT       
Sbjct: 64  KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123

Query: 150 ------------------------FNIMLNGLCKNRYTDNALRMFR-------------- 171
                                   +NI++  LCK    D+AL + R              
Sbjct: 124 LCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSL 183

Query: 172 -----GLQKHGFV-------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
                GL   G +             P LVT N+L++G C  G++  AR +L+ + D   
Sbjct: 184 DSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEEC 243

Query: 214 APNAITYTTIMKC------------CFRNRKYK-------------------LGL----- 237
           AP+ ++Y T++               F +R+                     LGL     
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303

Query: 238 -----EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI----- 287
                ++   M  +  + D + Y  +I    K G+L +A +  ++++  GV         
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363

Query: 288 ------------------------------VSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
                                         V+YN +I+  CK G LE A  L+ +M + G
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI---------VDRLG 368
              D  T+  ++DGLCK+  ++ A L    M ++G   N  ++N I         +D+  
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483

Query: 369 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + GK+D A  + + M     V D  TYS+++  LC   R+  A  LL   +K   +    
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
            Q  ++ GL  +G  +EA+++
Sbjct: 544 TQNTLIHGLCKAGRIKEAREV 564



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 57/378 (15%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNR 161
           M + GI P    + S++     +G+  EA ++F  M  C   +P    +N++++ L K +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH--SPYPDVYNVLIDSLSKRQ 58

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            T+   +M + +   G  P+  T+  ++ GLCKAG++  A  ++ E+      P   T +
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118

Query: 222 TIM-KCCFR---NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            +  + C R    R ++L LEI+       Y         V+ A  K  R+ +A +    
Sbjct: 119 FLAHELCLRGSMERAFQL-LEIMPVANSSAYNI-------VVVALCKAARVDDALELART 170

Query: 278 M------------------VTDGVQLD--------------IVSYNTLINLYCKEGKLEA 305
           M                  + D  ++D              +V+ N L+  +C  G+++ 
Sbjct: 171 MSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDK 230

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK------GARLHLEYMNKIGFDSNLEA 359
           A  LL  M  +    D+ ++  ++DGLCKAG ++      G R      +      +L  
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN ++  L ++ +ID A+ +FE M  +    DS++Y  ++  L KA +L  A  L    L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 416 KSGVRILKSAQKAVVDGL 433
            SGV     A  +++ GL
Sbjct: 351 HSGVTPSTVAYTSLIHGL 368


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 217/454 (47%), Gaps = 10/454 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C  NR+ +  + +   +R G +PDVVTY  LI   C          +  RM+
Sbjct: 129 LNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQ 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP------PDVWSYNSLMHCLF 123
           + G  P+VVTY +LI G  R   ++ +L L  EML    P      P+++SYN ++  L 
Sbjct: 189 KLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELC 248

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++GK  EA R+F +M+   + P   TF+ +++ LCK      A +    +   G VP+L 
Sbjct: 249 KIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLF 308

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+  LI+G C  G L +A+ +   +   G+ P+ I+YT ++    +    +  +++ + M
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            R G   D   +C ++      G++ +A      +    V  ++   +  ++  CK G L
Sbjct: 369 LRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCL 428

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L +E++    + D  +   LIDGLCKA  ++ A    E +++ G   ++  Y  +
Sbjct: 429 FEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIM 488

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++   K+G++D+A  +F+ ME      +  TYS+++H   K  +L    KLL   ++  V
Sbjct: 489 INGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            +  S    V D +      RE   I  +  + K
Sbjct: 549 SLAASIYTIVEDMVSKDEKCREWLDILQRFPVQK 582



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 185/390 (47%), Gaps = 10/390 (2%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
            ++++N+L+ A  +   +   +++  +M  AG+SP+  T N LI      + +   L  +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             ++  G  PDV +Y SL+  L    +  EA R+F  M      P   T+  ++ GLC+ 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 161 RYTDNALR----MFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
              + AL+    M  G   +     P + +YNI+I  LCK G+ + A+ +  E+ D G  
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +T++ ++    +        + L  M  +G   D F + ++I  F  +G L  A + 
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M + G + D++SY  LI  YCK   +E A  L +EM + G   D  T  +L+ GL  
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
           AG +  A+     +       NL   +  +D L K+G +  A+ +F  ++      D  +
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           ++ ++  LCKA++L +A +L     + G++
Sbjct: 450 FNCLIDGLCKARKLETAWELFEKLSQEGLQ 479



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 170/365 (46%), Gaps = 15/365 (4%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L   D M+       + S+N L+  L ++    +   +++ M    L+P   T NI++N
Sbjct: 80  ALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILIN 134

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC        L    G+ + G++P++VTY  LIKGLC   R+  A  +   +   G  P
Sbjct: 135 CLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWP 194

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF------DGFGYCTVIAAFVKIGRLK 269
           N +TY T++K   R     L L++   M      +      + F Y  +I    KIG+ K
Sbjct: 195 NVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWK 254

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA     +MV  GV+ D+V+++ LI+  CKEG +  A   L+ M  +G   D +T T LI
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 385
           +G C  G++  A+     M   G++ ++ +Y  ++    K   ++ A+ ++  M    + 
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  T+  ++  L  A ++  A KL        V          +DGL  +GC  EA ++
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 446 QSKIR 450
            ++++
Sbjct: 435 FNELK 439



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     N  +   CKA +LE A  +     + G+ PDVVTY ++I+ +C+    D    
Sbjct: 444 KLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANI 503

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           +   M E G +P+++TY++L+ G  +N+ L   + LL +M++
Sbjct: 504 LFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQ 545


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 217/457 (47%), Gaps = 7/457 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTI 64
           + R +NI +   CKA +L++A   I +G+   V  PD  T+  LID   +    D  Y I
Sbjct: 304 NVRTINIMIDRLCKAQKLDEA-CSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRI 362

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             RM +A   P+VV Y SLI    +         +  EM+  G  PD+   N+ M C+F+
Sbjct: 363 YERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFK 422

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ ++   +F+++      P T +++I+++ L K  +      ++  ++  G V +   
Sbjct: 423 AGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRA 482

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN +I G CK+G++  A  +L+E+   GH P  +TY +++    +  +      +    K
Sbjct: 483 YNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 542

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +   Y ++I  F K+GR+ EA   ME+M+  G+  ++ ++N L++   K  ++ 
Sbjct: 543 SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEIN 602

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A +    M+      ++ T+ ILI+GLCK      A +  + M K G   N   Y  ++
Sbjct: 603 EALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMI 662

Query: 365 DRLGKDGKIDHAINVFE----SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L K G +  A ++FE    S  + DS +Y++M+  L  A R   A +L       G  
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIR-MAKISH 456
           I      A++D L  + C  +A  + + +R  AK  H
Sbjct: 723 IHTKTCVALLDALHKAECLEQAAIVGAVLRETAKSQH 759



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 217/509 (42%), Gaps = 75/509 (14%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CKANRL++A  I     +   +P    YN +I  Y     FD  Y++L R R  G  P
Sbjct: 175 VLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIP 234

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            VV YN ++    +      +L + +EM    +P ++ +YN ++  L + G  + A +V 
Sbjct: 235 SVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVR 293

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M    L P   T NIM++ LCK +  D A  +F G+      P+  T+  LI GL K 
Sbjct: 294 DAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQ 353

Query: 196 GRLRTARWILKELGDSGHAPNAITYT---------------------------------- 221
           GR+  A  I + + D+   PN + YT                                  
Sbjct: 354 GRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLL 413

Query: 222 -TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T M C F+  + + G  +   +K +G+  D   Y  +I + VK G  +E  +    M  
Sbjct: 414 NTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKD 473

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM--------------------------- 313
            G  LD  +YNT+I+ +CK GK+  AY LL+EM                           
Sbjct: 474 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDE 533

Query: 314 --------EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
                   +  G E ++  ++ LIDG  K G +  A L +E M + G   N+  +NC++D
Sbjct: 534 AYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLD 593

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L K  +I+ A+  F+SM+      +  TY  +++ LCK ++   A        K G++ 
Sbjct: 594 GLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKP 653

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                 A++ GL  SG   +A  +  + R
Sbjct: 654 NTITYTAMISGLAKSGNVAQASSLFERFR 682



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 164/383 (42%), Gaps = 40/383 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    Y  LI A  +    D    + N+M+E G   +V    +LI   +R   +  +L L
Sbjct: 59  PAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSL 118

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM       D+  YN  + C  ++GK D A + F +M    L P   T+  M+  LCK
Sbjct: 119 LDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCK 178

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+ +F  ++++  VP    YN +I G   AG+   A  +L+     G  P+ + 
Sbjct: 179 ANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVA 238

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  I+ C  +  K    L I   MKR                           D M  + 
Sbjct: 239 YNCILTCLGKKGKTDKALRIFEEMKR---------------------------DAMPNLP 271

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           T         YN +I + CK G +EAA+ + D M++ G   +  T  I+ID LCKA  + 
Sbjct: 272 T---------YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLD 322

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M+      +   +  ++D LGK G++D A  ++E M    ++ +   Y+S++
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
            N  K  R     K+    ++SG
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSG 405



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 5/358 (1%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           +FD    IL  M  AG  P   T   L+A   ++  L  + DLL  M      P   +Y 
Sbjct: 6   NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           +L+  L ++G+ D    +F  M              ++    +    D AL +   ++ +
Sbjct: 66  TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
            F  ++V YN+ I    K G++  A     E+  +G  P+ +TYT++M    +  +    
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +EI   M++       + Y T+I  +   G+  EA   +E+    G    +V+YN ++  
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTC 245

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K+GK + A  + +EM++     +  T+ I+I  LCKAGN++ A    + M + G   N
Sbjct: 246 LGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           +   N ++DRL K  K+D A ++FE M+ K    D  T+ S++  L K  R+  A ++
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRI 362



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 190/482 (39%), Gaps = 75/482 (15%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
            LG   +V     LI  + +    DA  ++L+ M+      D+V YN  I    +   + 
Sbjct: 89  ELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVD 148

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +     EM   G+ PD  +Y S+M  L +  + DEA  +F+ M      PC   +N M+
Sbjct: 149 MAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMI 208

Query: 155 NG-----------------------------------LCKNRYTDNALRMFRGLQKHGFV 179
            G                                   L K   TD ALR+F  +++   +
Sbjct: 209 MGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-M 267

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P L TYNI+I  LCKAG +  A  +   + ++G  PN  T   ++    + +K      I
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI 327

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME----------------------- 276
              M  K  + DG  +C++I    K GR+ +A    E                       
Sbjct: 328 FEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFK 387

Query: 277 ------------QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
                       +M+  G   D++  NT ++   K G+ E    L +E++ +GF  D  +
Sbjct: 388 CDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRS 447

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ++ILI  L KAG  +        M   G   +  AYN ++D   K GK++ A  + E M+
Sbjct: 448 YSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 507

Query: 385 V----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
                    TY S+V  L K  RL  A  L      +G+ + +    +++DG    G   
Sbjct: 508 TMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVD 567

Query: 441 EA 442
           EA
Sbjct: 568 EA 569



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 117/221 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TR  N  +  FCK+ ++ KA  ++ +   +G  P VVTY  ++D   +    D  Y +
Sbjct: 478 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYML 537

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  + V Y+SLI G  +   +  +  +++EM++ G+ P+V+++N L+  L +
Sbjct: 538 FEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVK 597

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M     TP   T+ I++NGLCK R  + A   ++ +QK G  P  +T
Sbjct: 598 AEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL K+G +  A  + +    SG  P++ +Y  +++
Sbjct: 658 YTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIE 698



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  R+++A  ++ + ++ G+ P+V T+N L+D   +    +        M++   +P+
Sbjct: 560 FGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPN 619

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY  LI G  +    + +     EM + G+ P+  +Y +++  L + G   +A+ +F+
Sbjct: 620 QITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFE 679

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                   P +A++N M+ GL       +A ++F   +  G      T   L+  L KA 
Sbjct: 680 RFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAE 739

Query: 197 RLRTAR---WILKELGDSGHAPNA 217
            L  A     +L+E   S HA  +
Sbjct: 740 CLEQAAIVGAVLRETAKSQHAARS 763


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 215/447 (48%), Gaps = 38/447 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  +L++AE++  +    G+ P+ VTY++LID++C+    D     L +M E
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI   V  Y+SLI+G  +   L  +  L DEM+  G+ P+V  Y SL+    + G+   
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R++ +M    ++P T TF  +++GLC       A ++F  + +   +P  VTYN+LI+
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G    A  +L E+ + G  P+  TY  ++       +     E ++ ++ +    
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN------------------- 291
           +   +  ++  + K GRL +A D   +M+  GV +D+V Y+                   
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658

Query: 292 ----------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                           T+I+   K G L+ A+ L D M  +G   +  T+T LI+GLCK 
Sbjct: 659 KQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKI 718

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYS 392
           G +  A L    M       N   Y C +D L  +G I+ AI + + +    + ++ TY+
Sbjct: 719 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYN 778

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGV 419
            ++   CK  R+  A+++L++ + SG+
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGI 805



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 184/379 (48%), Gaps = 4/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV  Y  ++ + C+   F     ++ RM  +G    V TYN  I G  +N  +  +
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +++ + +   G+  DV +Y +L+  L ++ + +    +  +MI     P  A  + +++G
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L K     +A  +   ++K G  P L  YN LI  +CK G+L  A  +   +G  G  PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY+ ++    +  K  + L  L  M   G     + Y ++I+   K+G+L+ A    +
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+ +G++ ++V Y +LI+ YCKEG+L  A+ L  EM  +G   + YT T LI GLC A 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +  A      M +     N   YN +++   K+G    A  + + M     V D++TY 
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 393 SMVHNLCKAKRLPSASKLL 411
            ++  LC   R+  A + +
Sbjct: 570 PLISGLCSTGRVSEAREFM 588



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 199/418 (47%), Gaps = 8/418 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           + GV P +  YN LI++ C+    D   ++ N M   G+ P+ VTY+ LI    +   L 
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
            +L  L +M E+GI   V+ Y+SL+  HC  +LGK   A  +F +MI   L P    +  
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHC--KLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++G CK     NA R++  +   G  P   T+  LI GLC A R+  A  +  E+ +  
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN +TY  +++   +        E+L  M  KG   D + Y  +I+     GR+ EA 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           ++M  +  +  +L+ + ++ L++ YCKEG+L+ A     EM  +G   D   +++LI G+
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            +  + +     L+ M+  G   +   Y  ++D   K G +  A  +++ M     + + 
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
            TY+++++ LCK   +  A  L    L S     ++     +D L   G   +A ++ 
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 763



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 36/386 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C ANR+ +A  +  + +   V+P+ VTYN+LI+ +C+  +    + +L+ M E G+
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 74  SPDVVTYNSLIAGAT-----------------------------------RNSLLSCSLD 98
            PD  TY  LI+G                                     +   L  +LD
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
              EML  G+  D+  Y+ L++ + +         + + M    L P    +  M++   
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANA 681

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K      A  ++  +   G +P +VTY  LI GLCK G +  A  + +E+  S   PN  
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 741

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY   +         +  +++   +  +G+  +   Y  +I  F K+GR++EA + +  M
Sbjct: 742 TYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 800

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G+  D +SY+T+I  YC+ G L+ A  L + M  +G   D   +  LI G C  G +
Sbjct: 801 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 860

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIV 364
             A    + M + G   N   YN ++
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSLI 886



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 36/317 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  RL+ A     + +  GV  D+V Y++LI    +     +   +L +M + G+ PD
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y ++I    +   L  +  L D M+  G  P+V +Y +L++ L ++G  D+A  + +
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   T+   L+ L      + A+++   L + GF+   VTYNILI+G CK G
Sbjct: 730 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLG 788

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R++ A  +L  + DSG +P+ I+Y+TI+                            + YC
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTII----------------------------YEYC 820

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                  + G LKEA    E M+  GV  D V+YN LI   C  G+L  A+ L D+M ++
Sbjct: 821 -------RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRR 873

Query: 317 GFECDKYTHTILIDGLC 333
           G + ++ T+  LI G C
Sbjct: 874 GVKPNRATYNSLIHGTC 890



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 177/420 (42%), Gaps = 39/420 (9%)

Query: 30  IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR 89
            +D  R       + +++LI  Y Q      G  ++  M + GI P + T + ++ G  R
Sbjct: 133 FLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIR 192

Query: 90  NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 +L L DE++  G+ PDV+                                    
Sbjct: 193 IRQFRMALHLFDEIVSSGLRPDVY-----------------------------------V 217

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +  ++  LC+ +    A  +   ++  G    + TYN+ I+GLCK  R+  A  I   L 
Sbjct: 218 YTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLS 277

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G   +  TY T++    +  +++ G E+++ M   G+         ++    K G + 
Sbjct: 278 YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A D + ++   GV   +  YN LIN  CK+GKL+ A  L + M  +G   +  T++ILI
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           D  CK G +  A   L  M ++G  + +  Y+ ++    K GK+  A ++F+ M      
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +   Y+S++   CK   L +A +L       G+        A++ GL H+    EA K+
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 64/115 (55%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +  FCK  R+++A  ++++ I  G+ PD ++Y+ +I  YC+         + 
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
             M   G++PD V YN LI G      L+ + +L D+M+  G+ P+  +YNSL+H
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 4/202 (1%)

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
            G+  +I  +V+  R  +    +  M+  G+   I + + ++N   +  +   A  L DE
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +   G   D Y +T ++  LC+  +   AR  +  M   G D ++  YN  +  L K+ +
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +  A+ +   +  K    D  TY ++V  LCK +   +  +++   ++ G    ++A   
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 429 VVDGLRHSGCRREAKKIQSKIR 450
           +VDGLR  G    A  + +K++
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVK 347



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+   L++A  +    +  GV PD V YN LI   C        + + + M   G+ P+
Sbjct: 819 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878

Query: 77  VVTYNSLIAGATRNSLLSCSLD 98
             TYNSLI G    S +S + D
Sbjct: 879 RATYNSLIHGTCLMSSVSSTAD 900


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 224/478 (46%), Gaps = 43/478 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM- 68
           NI +   C A R + A  +++  +  LGV PD ++Y+ ++ + C+         +L+ M 
Sbjct: 158 NILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMV 217

Query: 69  -REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            +  G SP+VV+YN++I G  R   +S + +L  EM++ G+ PDV +Y+S +  L +   
Sbjct: 218 KKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARA 277

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A  V + MI     P   T+N M++G            MFR + + G +P++ T N 
Sbjct: 278 MDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNS 337

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI------------MKCCFRNRK--- 232
            +  LCK G+ + A      +   GH P+ +TY+ +            M   F + +   
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNG 397

Query: 233 -------YKLGLE-------------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
                  Y + ++             I + M+ +G   D + Y TVIAAF ++GRL +A 
Sbjct: 398 IVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAM 457

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF-ECDKYTHTILIDG 331
           D   QM+  G++ D + YN+LI  +C  G L  A  L+ EM  +G    +      +I+ 
Sbjct: 458 DKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINS 517

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KD 387
           LCK G +  A+   + +  IG   ++  +N ++D  G  GK++ A  V ++M       D
Sbjct: 518 LCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPD 577

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             TYS+++   C+  R+     L    L  GV+        ++ GL + G    AKK+
Sbjct: 578 VVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKM 635



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 5/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F +   + KA  +  + ++ GV+PDVVTY+  IDA C+  + D    +L +M  
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN +I G +       +  +  EM   G+ PD+++ NS M  L + GK  E
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKE 350

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F  M      P   T++++L+G     Y  + L +F  ++ +G V +   YNILI 
Sbjct: 351 AAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K G +  A  I  ++ + G  P+A TY T++    R  +    ++  + M   G   
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAYLL 309
           D   Y ++I  F   G L +A + + +M++ G+ + + V +N++IN  CKEG++  A  +
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDI 530

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D +   G   D  T   LIDG    G ++ A   L+ M  +G + ++  Y+ ++D   +
Sbjct: 531 FDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR 590

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+ID  + +F  M  K     + TY  ++H L    R   A K+    ++SG  +  S 
Sbjct: 591 NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ GL  + C  EA  +  K+
Sbjct: 651 CGIILGGLCRNNCDDEAIALFKKL 674



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 207/434 (47%), Gaps = 15/434 (3%)

Query: 14  VCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFV-SFDAGYTIL 65
           VCT+       C+A+R     A+    ++ G+  DV+  N+L+   C    S DA   +L
Sbjct: 119 VCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLL 178

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM--GIPPDVWSYNSLMHCLF 123
           +RM E G+ PD ++Y++++     +S    +LDLL  M++   G  P+V SYN+++H  F
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFF 238

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+  +A  +F +M+   + P   T++  ++ LCK R  D A  + R +  +GF P+ V
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKV 298

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN +I G    G+ +    + +E+   G  P+  T  + M    ++ K K   E   +M
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG+  D   Y  ++  +   G + +  +    M  +G+  D   YN LI+ Y K G +
Sbjct: 359 AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMM 418

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A L+  +M+++G   D +T+  +I    + G +  A      M  +G   +   YN +
Sbjct: 419 DEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478

Query: 364 VDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +      G +  A  +   M  +     ++  ++S++++LCK  R+  A  +    +  G
Sbjct: 479 IQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIG 538

Query: 419 VRILKSAQKAVVDG 432
            R       +++DG
Sbjct: 539 ERPDVITFNSLIDG 552



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 183/388 (47%), Gaps = 7/388 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP V TYN+L+D  C+      G+ +  R  + G+  DV+  N L+           +++
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 99  -LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLN 155
            LL  M E+G+ PD  SY++++  L +  +   A  +   M+   G  +P   ++N +++
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +      A  +F  + + G VP++VTY+  I  LCKA  +  A  +L+++  +G  P
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY  ++       ++K    +   M R+G   D F   + +++  K G+ KEA ++ 
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M   G + D+V+Y+ L++ Y  EG +     L + ME  G   D   + ILID   K 
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKR 415

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G +  A L    M + G   +   Y  ++    + G++  A++ F  M       D+  Y
Sbjct: 416 GMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVY 475

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +S++   C    L  A +L+   +  G+
Sbjct: 476 NSLIQGFCMHGNLVKAKELISEMMSRGI 503



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 174/383 (45%), Gaps = 8/383 (2%)

Query: 26  AEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           AE  ++D + L       G++ D   YN+LIDAY +    D    I  +M+E G+ PD  
Sbjct: 379 AEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAW 438

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY ++IA  +R   L+ ++D  ++M+ MG+ PD   YNSL+      G   +A  +  +M
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 139 IC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +  G   P T  FN ++N LCK      A  +F  +   G  P+++T+N LI G    G+
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +L  +   G  P+ +TY+ ++    RN +   GL +   M  KG       Y  
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++      GR   A     +M+  G  +DI +   ++   C+    + A  L  ++    
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + +      +ID + K    + A    + ++  G   N   Y  ++  L K+G ++ A 
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 378 NVFESMEVKDSFTYSSMVHNLCK 400
           N+F  ME       S +++N+ +
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIR 761



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 191/435 (43%), Gaps = 22/435 (5%)

Query: 1   MFGKLSTRLL-------NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           MF +++ R L       N  + + CK  + ++A          G  PD+VTY++L+  Y 
Sbjct: 319 MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYA 378

Query: 54  QFVSFDAGYTI-----LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
                  GY +      N M   GI  D   YN LI    +  ++  ++ +  +M E G+
Sbjct: 379 A-----EGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGV 433

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            PD W+Y +++    ++G+  +A   F  MI   L P T  +N ++ G C +     A  
Sbjct: 434 MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKE 493

Query: 169 MFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
           +   +   G   P  V +N +I  LCK GR+  A+ I   +   G  P+ IT+ +++   
Sbjct: 494 LISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGY 553

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
               K +    +L AM   G   D   Y  ++  + + GR+ +      +M++ GV+   
Sbjct: 554 GLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTT 613

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           ++Y  +++    +G+   A  +  EM + G   D  T  I++ GLC+      A    + 
Sbjct: 614 ITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKK 673

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           +  +    N+   N ++D + K  K + A  +F+S+     V ++ TY  M+ NL K   
Sbjct: 674 LGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGS 733

Query: 404 LPSASKLLLSCLKSG 418
           +  A  +     KSG
Sbjct: 734 VEEADNMFSLMEKSG 748



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           + +T   N  + + CK  R+ +A+ I    I +G  PDV+T+N LID Y      +  + 
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M   GI PDVVTY++L+ G  RN  +   L L  EML  G+ P   +Y  ++H LF
Sbjct: 565 VLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+   A ++  +MI    T   +T  I+L GLC+N   D A+ +F+ L        + 
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIA 684

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
             N +I  + K  +   A  +   +  +G  PNA TY  ++    +    +    + S M
Sbjct: 685 IINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLM 744

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK- 302
           ++ G          +I   ++ G + +A +Y+ ++    + L+  + + +++L+ ++GK 
Sbjct: 745 EKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKY 804

Query: 303 ------LEAAYLLLDE 312
                 L A Y   DE
Sbjct: 805 REQIKSLPAMYQFFDE 820



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 160/337 (47%), Gaps = 1/337 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGY 62
           K  T + N  +  FC    L KA+ +I + +  G+  P+ V +N +I++ C+        
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            I + +   G  PDV+T+NSLI G      +  +  +LD M+ +GI PDV +Y++L+   
Sbjct: 529 DIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGY 588

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G+ D+   +F++M+   + P T T+ I+L+GL  +  T  A +M   + + G   ++
Sbjct: 589 CRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            T  I++ GLC+      A  + K+LG      N     T++   ++ RK +   E+  +
Sbjct: 649 STCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDS 708

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   G   +   Y  +I   +K G ++EA +    M   G        N +I +  ++G+
Sbjct: 709 ISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGE 768

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           +  A   L +++ +    +  T ++++    + G  +
Sbjct: 769 ISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYR 805


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 206/447 (46%), Gaps = 51/447 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC+  R++   +++  GI+LG+ P +VT+  LI+   +   F     + + M 
Sbjct: 13  LNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMV 72

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD  TY ++I G  +    + +  L  +M E G   +V +Y++L+H L +  + +
Sbjct: 73  ARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVN 132

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M   D++P   T+  ++ GLC       A  +   +     +P +VT+N+L+
Sbjct: 133 EALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLV 192

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK----- 244
              CK G++  A  +LK + + G  P+ +TY ++M        Y +  E++ A K     
Sbjct: 193 DTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM------YGYSMWTEVVEARKLFDVM 246

Query: 245 -RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D F Y  +I  + K  R+ EA     +M+  G   + VSYNTLI+  C+ G+L
Sbjct: 247 ITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL 306

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDG-------------------------------- 331
             A  L   M   G   + YT+ IL+DG                                
Sbjct: 307 REAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNIL 366

Query: 332 ---LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
              +CK+GN+K AR     +  IG   N++ Y  I++ L K+G +D A+  F +ME    
Sbjct: 367 VNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGC 426

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLL 411
             D F+Y+ ++    + K    A  L+
Sbjct: 427 PPDEFSYNVIIRGFLQHKDESRAVHLI 453



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 203/410 (49%), Gaps = 4/410 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+  T N+LI+ +CQ    D G+++L +  + G+ P +VT+ +LI G  +    + +
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L D+M+  G  PD ++Y ++++ L ++G+   A  +F+ M          T++ +++ 
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK R  + AL +F  ++     P + TY  LI+GLC   R + A  +L E+      PN
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+  ++    +  K      +L  M   G   D   Y +++  +     + EA    +
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+T G + D+ SY+ LIN YCK  +++ A  L +EM  QG   +  ++  LI GLC+ G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A+   + M+  G   NL  Y  ++D   K G +  A  +F +M+      +   Y+
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            +V+ +CK+  L  A +L       G++        +++GL   G   EA
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEA 414



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  +R ++A A++ +   L ++P+VVT+N+L+D +C+     A   +L  M E G+ PD
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSL+ G +  + +  +  L D M+  G  PDV+SY+ L++   +  + DEA ++F 
Sbjct: 220 VVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFN 279

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI    TP   ++N +++GLC+      A  +F+ +  +G +P L TY IL+ G CK G
Sbjct: 280 EMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  + + +  +   PN + Y  ++    ++   K   E+ S +   G   +   Y 
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K G L EA +    M  DG   D  SYN +I  + +      A  L+ EM  +
Sbjct: 400 TIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459

Query: 317 GFECDKYT 324
           GF  D  T
Sbjct: 460 GFITDAGT 467



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  +CKA R+++A+ +  + I  G  P+ V+YN LI   CQ         +   M  
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++ TY  L+ G  +   L  +  L   M    + P++  YN L++ + + G   +
Sbjct: 319 NGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKD 378

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F ++    L P    +  ++NGLCK    D AL  FR ++  G  P+  +YN++I+
Sbjct: 379 ARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAIT 219
           G  +      A  ++ E+ D G   +A T
Sbjct: 439 GFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 48/103 (46%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI V   CK+  L+ A  +  +   +G+ P+V  Y  +I+  C+    D        M
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
            + G  PD  +YN +I G  ++   S ++ L+ EM + G   D
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 210/436 (48%), Gaps = 42/436 (9%)

Query: 22  RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +++K + +I  G +   LG+  D+ T+N++I+ +C         ++L +M + G  PD V
Sbjct: 97  KMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRV 156

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T  SL+ G  R + +S ++ L+D+M+E+G  PD+ +YN++                    
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAI-------------------- 196

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                          ++ LCK R  ++AL  F+ + + G  P +VTY  L+ GLC +GR 
Sbjct: 197 ---------------IDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L+++      PN ITY+ ++    +N K     EI   M R     D   Y ++
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I       R+ EA    + MV+ G   D+VSYNTLIN +CK  ++E    L  +M ++G 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T+  LI G  + G++  A+     M+  G   ++  YN ++  L  +G ++ A+ 
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +FE M+      D  TY++++  +CK  ++  A  L  S    G++        ++ GL 
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 435 HSGCRREAKKIQSKIR 450
             G + E + + +K++
Sbjct: 482 TKGLQHEVEALYTKMK 497



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 168/320 (52%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ NR+  A +++   + +G  PD+V YN +ID+ C+    +        +   GI P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPN 224

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +L+ G   +   + +  LL +M++  I P+V +Y++L+    + GK  EA  +F+
Sbjct: 225 VVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFE 284

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T++ ++NGLC +   D A +MF  +   G  P++V+YN LI G CKA 
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAK 344

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +++   G   N +TY T+++  F+        E  S M   G + D + Y 
Sbjct: 345 RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G L++A    E M    + LDIV+Y T+I   CK GK+E A+ L   +  +
Sbjct: 405 ILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK 464

Query: 317 GFECDKYTHTILIDGLCKAG 336
           G + D  T+T ++ GLC  G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 180/332 (54%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  FC   ++  A +++   ++LG  PD VT   L++ +C+        +++++M 
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G  PD+V YN++I    +   ++ +LD   E+   GI P+V +Y +L++ L   G+ +
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DMI   +TP   T++ +L+   KN     A  +F  + +    P++VTY+ LI
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC   R+  A  +   +   G  P+ ++Y T++    + ++ + G+++   M ++G  
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F ++G + +A ++  QM + GV  DI +YN L+   C  G LE A ++
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVI 422

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            ++M+K   + D  T+T +I G+CK G ++ A
Sbjct: 423 FEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDA 454



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 160/308 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  R+  A     +  R G+ P+VVTY  L++  C    ++    +L  M +
Sbjct: 194 NAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK 253

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I+P+V+TY++L+    +N  +  + ++ +EM+ M I PD+ +Y+SL++ L    + DE
Sbjct: 254 RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN++F  M+     P   ++N ++NG CK +  ++ +++FR + + G V   VTYN LI+
Sbjct: 314 ANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQ 373

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  + G +  A+    ++   G +P+  TY  ++     N   +  L I   M++     
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDL 433

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y TVI    K G++++A      +   G++ DIV+Y T+++  C +G       L 
Sbjct: 434 DIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALY 493

Query: 311 DEMEKQGF 318
            +M+++G 
Sbjct: 494 TKMKQEGL 501



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 6/206 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA R+E    +     + G++ + VTYN LI  + Q    D      ++M  
Sbjct: 334 NTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDS 393

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SPD+ TYN L+ G   N LL  +L + ++M +  +  D+ +Y +++  + + GK ++
Sbjct: 394 FGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVED 453

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  +    L P   T+  M++GLC          ++  +++ G +      ++L  
Sbjct: 454 AWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMK---NDSMLCL 510

Query: 191 GLCKAGRLRTARWILKELGDSGHAPN 216
           G    G +  +  ++K++   G+AP+
Sbjct: 511 G---DGDITISAELIKKMLSCGYAPS 533



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 4/193 (2%)

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +L +A +   +MV       IV +N L++   K  K +    L  +ME  G   D YT  
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV 385
           I+I+  C    +  A   L  M K+G++ +      +V+   +  ++  A+++ + M E+
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 386 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               D   Y++++ +LCK +R+  A        + G+R       A+V+GL +SG   +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 443 KKIQSKIRMAKIS 455
            ++   +   KI+
Sbjct: 245 ARLLRDMIKRKIT 257



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 7/145 (4%)

Query: 1   MFGKLSTRLL-------NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+S R L       N  +  F +   ++KA+         GV PD+ TYN+L+   C
Sbjct: 352 LFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLC 411

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                +    I   M+++ +  D+VTY ++I G  +   +  +  L   +   G+ PD+ 
Sbjct: 412 DNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIV 471

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDM 138
           +Y ++M  L   G   E   ++  M
Sbjct: 472 TYTTMMSGLCTKGLQHEVEALYTKM 496


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 11/409 (2%)

Query: 10  LNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           + I VC++       CK   + +A+A++ + +  G  P V+TYN L++ Y +        
Sbjct: 184 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN 243

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            IL+ M +  +  +V TY  LI   +R+S +  +  L DEML+ GI PDV+ Y S+++  
Sbjct: 244 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 303

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G    A  +F +M    L P   T+  ++NG CK      A  M   +Q  G     
Sbjct: 304 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 363

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V +N L+ G CK G +  A  +   +   G   +A T   I     R+ + +    +L  
Sbjct: 364 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 423

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ +G   +   +  +I  + K     EA    + M   G    +V+YN  I  YCK+GK
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +E AY L++EM+++G   D YT+T LIDG   +GN+  A      M ++G + N+  Y  
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           I+  L KDG+ D A  +++ M     V D   YSS++ +L K   L S 
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSG 592



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 186/398 (46%), Gaps = 8/398 (2%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           +ML   Y     FD+   + +  R+ G   D  +    +    R+  +   ++ L +M++
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 181

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            GI   V S+ +++  L + G+   A  +  +++C    P   T+N +LNG  + +    
Sbjct: 182 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 241

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
              +   ++K+     + TY +LI+   ++ ++  A  +  E+   G  P+   YT+I+ 
Sbjct: 242 VNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIIN 301

Query: 226 --CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
             C F N K    L     M  +    + + Y  +I    K G +K A   +  M + GV
Sbjct: 302 WNCKFGNMKRAFVL--FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV 359

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
            ++ V +NTL++ YCK+G ++ A  L + M+++GFE D +T  I+  G C++   + A+ 
Sbjct: 360 DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKR 419

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLC 399
            L  M + G   N+ +++ ++D   K+     A  +F+ ME K       TY++ +   C
Sbjct: 420 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYC 479

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           K  ++  A KL+    + G+        +++DG R SG
Sbjct: 480 KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/347 (21%), Positives = 146/347 (42%), Gaps = 59/347 (17%)

Query: 160 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           N  T + LR F  L Q     P+L  + IL   L +A +    + +LK + + G+  + +
Sbjct: 41  NLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNV 100

Query: 219 TY------------TTIMKCC---FR----NRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
                         + + K C   FR    NR +   LE+    ++KG+  D       +
Sbjct: 101 ERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL 160

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
            A  + G ++   +++ QMV  G+++ + S+  +++  CK+G++  A  L+DE+  +GF+
Sbjct: 161 LALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFK 220

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
               T+  L++G  +  ++ G    L  M K   D N+  Y  +++   +  KI+ A  +
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280

Query: 380 FESME---------------------------------------VKDSFTYSSMVHNLCK 400
           F+ M                                        V +++TY ++++  CK
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           A  + +A  ++      GV + +     ++DG    G   EA ++Q+
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQN 387



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 35/256 (13%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA  ++ AE ++ D    GV  + V +N L+D YC+    D    + N M++ G   D 
Sbjct: 339 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 398

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            T N + +G  R++    +  LL  M E G+ P+V S++ L+    +     EA R+F+ 
Sbjct: 399 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 458

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE---------------- 181
           M      P   T+N  +   CK    + A ++   +Q+ G +P+                
Sbjct: 459 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGN 518

Query: 182 -------------------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
                              +VTY ++I GL K GR   A  +  E+   G  P+   Y++
Sbjct: 519 VDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSS 578

Query: 223 IMKCCFRNRKYKLGLE 238
           ++    +      GLE
Sbjct: 579 LIASLHKVGPLVSGLE 594


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 198/416 (47%), Gaps = 4/416 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+VVTY  LI+  C+  S  A   +L  M +    PDVV Y S+I    ++  ++ +
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L  EM+  GI P +++YNSL+H L  L +      +  +M+   + P    F+ +++ 
Sbjct: 228 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK      A  +   + K G  P +VTYN L+ G C    +  A  +   +   G AP+
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++Y+T++    + ++ +  + +   M RK    +   Y T++     +GRL++A     
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MVT G   D VSY  L++  CK  +L+ A  LL  +E    + D   +TI+IDG+C+AG
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            ++ AR     ++  G   N+  Y  +++ L + G +  A  +F  M+ K    +  TY+
Sbjct: 468 ELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYN 527

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            +     +        +LL   L  G     S    +V+ L   G  +  K+I S+
Sbjct: 528 LITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 205/419 (48%), Gaps = 4/419 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ P++ T N+LI+++C        +++L ++ + G  P++ T+N+LI G      +  
Sbjct: 97  FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 156

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            L L D+M+  G  P+V +Y +L++ L ++G    A R+ + M  G+  P    +  +++
Sbjct: 157 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIID 216

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P + TYN LI  LC     +    +L E+ +S   P
Sbjct: 217 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 276

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + ++T++    +  K     +++  M ++G   +   Y  ++        + EA    
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 336

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   D+VSY+TLIN YCK  ++E A  L +EM ++    +  T++ L+ GLC  
Sbjct: 337 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 396

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++ A      M   G   +  +Y  ++D L K+ ++D AI + +++E      D   Y
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  +C+A  L +A  L  +    G+         +++GL   G   EA K+  +++
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  +  + I  G+ P + TYN LI A C    +     +LN M  + I P
Sbjct: 217 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 276

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           +VV +++++    +   +  + D++D M++ G+ P+V +YN+LM  HCL    + DEA +
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL--RSEMDEAVK 334

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+C    P   +++ ++NG CK +  + A+ +F  + +   +P  VTY+ L+ GLC
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+ ++Y  ++    +NR+    + +L A++      D  
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 454

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI    + G L+ A D    + + G+  ++ +Y  +IN  C++G L  A  L  EM
Sbjct: 455 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514

Query: 314 EKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +++G+  +  T+ ++  G  +    ++G +L L+ M   GF +++     +V+ L  DG 
Sbjct: 515 KRKGYSPNGCTYNLITRGFLRNNETLRGIQL-LQEMLARGFSADVSTSTVLVEMLSDDG- 572

Query: 373 IDHAI 377
           +D ++
Sbjct: 573 LDQSV 577



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           ++N        F + D   +  NRM      P +  +  L+   T+    S  L L  +M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GIPP++++ N L++    L +   A  V   ++     P  ATFN ++ GLC     
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              L +F  +   GF P +VTY  LI GLCK G    A  +L+ +      P+ + YT+I
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++R+      + S M  +G +   F Y ++I A   +   K  T  + +MV   +
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             ++V ++T+++  CKEGK+  A+ ++D M K+G E +  T+  L+DG C    +  A  
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
             + M   GF  ++ +Y+ +++   K  +I+ A+ +FE M     + ++ TYS+++H LC
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394

Query: 400 KAKRLPSASKLLLSCLKSG 418
              RL  A  L    +  G
Sbjct: 395 HVGRLQDAIALFHEMVTRG 413



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 202/414 (48%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +  +  L+ +  +   +    ++ ++M   GI P++ T N LI        L  +  +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  P++ ++N+L+  L   GK  E   +F  MI     P   T+  ++NGLCK
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R +++    P++V Y  +I  LCK  ++  A  +  E+   G +P+  T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++       ++K    +L+ M       +   + TV+ A  K G++ EA D ++ M+
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ ++V+YN L++ +C   +++ A  + D M  +GF  D  +++ LI+G CK   I+
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M +     N   Y+ ++  L   G++  AI +F  M    ++ D  +Y  ++
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +RL  A  LL +   S +         V+DG+  +G    A+ + S +
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 479



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 154/304 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +  V   CK  ++ +A  ++   I+ GV P+VVTYN L+D +C     D    + + M
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G +PDVV+Y++LI G  +   +  ++ L +EM    + P+  +Y++LMH L  +G+ 
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F +M+     P   ++ I+L+ LCKNR  D A+ + + ++     P++  Y I+
Sbjct: 400 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G+C+AG L  AR +   L   G  PN  TYT ++    +        ++   MKRKGY
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +G  Y  +   F++          +++M+  G   D+ +   L+ +   +G  ++   
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 579

Query: 309 LLDE 312
           +L E
Sbjct: 580 ILSE 583



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 165/326 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C     +   A++ + +   ++P+VV ++ ++DA C+       + +++ M +
Sbjct: 247 NSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK 306

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTYN+L+ G    S +  ++ + D M+  G  PDV SY++L++   ++ + ++
Sbjct: 307 RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEK 366

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M   +L P T T++ +++GLC      +A+ +F  +   G +P+ V+Y IL+ 
Sbjct: 367 AMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 426

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK  RL  A  +LK +  S   P+   YT ++    R  + +   ++ S +  KG   
Sbjct: 427 YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHP 486

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y  +I    + G L EA+    +M   G   +  +YN +   + +  +      LL
Sbjct: 487 NVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 546

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAG 336
            EM  +GF  D  T T+L++ L   G
Sbjct: 547 QEMLARGFSADVSTSTVLVEMLSDDG 572



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 58/132 (43%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++  I +   C+A  LE A  +  +    G+ P+V TY ++I+  CQ         +   
Sbjct: 454 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G SP+  TYN +  G  RN+     + LL EML  G   DV +   L+  L   G 
Sbjct: 514 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 573

Query: 128 PDEANRVFQDMI 139
                ++  + +
Sbjct: 574 DQSVKQILSEFL 585


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 210/436 (48%), Gaps = 4/436 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK   ++KA  ++   ++ GV+P+ +TYN ++  YC           L +MR  G+
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYNSL+    +N   + +  + D M + G+ PD+ +Y +L+      G   E + 
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    FNI++    K    D A+ +F  +++HG  P +VTY  +I  LC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+G +  A    +++ D G  PN I YT+++       K+    E++  M  +G   +  
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ ++++Y+TLI+ YC  GK++ A  LL  M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G C+   +  A    + M   G   N+  YN I+  L    + 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 374 DHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A    + + +S    +  TY+ ++H LCK      A ++  +   + +++       +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 430 VDGLRHSGCRREAKKI 445
           +  L   G   EAK +
Sbjct: 658 IGALLKVGRNDEAKDL 673



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 208/436 (47%), Gaps = 7/436 (1%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            C  NR ++A  ++    D    G  PDVV+Y  +I+ + +    D  Y+  + M +  I
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVVTY+S+IA   +   +  ++++L  M++ G+ P+  +YNS++H      +P EA  
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             + M    + P   T+N +++ LCKN  +  A ++F  + K G  P++ TY  L++G  
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L     +L  +  +G  P+   +  ++    +  K    + + S M++ G   +  
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI    K G + +A  Y EQM+ +G+  +I+ Y +LI+  C   K + A  L+ EM
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G   +      +I   CK G +  +    + M +IG   N+  Y+ ++D     GK+
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 374 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +  SM       D  TY+++++  C+  R+  A  L    + SGV         +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 430 VDGLRHSGCRREAKKI 445
           + GL H+     AK++
Sbjct: 588 LQGLFHTRRTAAAKEL 603



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 217/440 (49%), Gaps = 8/440 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + ++ G   + +T+  L+   C    + DA   +L RM E    PD
Sbjct: 98  CRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPD 157

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +   L+ G    +    +L+LL  M +    G  PDV SY ++++  F+ G  D+A  
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   ++P   T++ ++  LCK +  D A+ +   + K+G +P  +TYN ++ G C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            + + + A   LK++   G  P+ +TY ++M    +N +     +I  +M ++G   D  
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            YCT++  +   G L E    ++ MV +G+  D   +N LI  Y K+ K++ A L+  +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G   +  T+  +I  LCK+G++  A L+ E M   G   N+  Y  ++  L    K 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +   M  +    ++  ++S++H+ CK  R+  + KL    ++ GV+        +
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +DG   +G   EA K+ S +
Sbjct: 518 IDGYCLAGKMDEATKLLSSM 537



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 204/450 (45%), Gaps = 50/450 (11%)

Query: 1   MFGKLSTRLLNICVCTFCK-------ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F  ++ R L   + T+C           L +  A++   +R G+ PD   +N+LI AY 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +    D    + ++MR+ G++P+VVTY ++I    ++  +  ++   ++M++ G+ P++ 
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            Y SL+H L    K D+A  +  +M+   +   T  FN +++  CK      + ++F  +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            + G  P ++TY+ LI G C AG++  A  +L  +   G  P+ +TY T++         
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN-------- 554

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                               GYC       ++ R+ +A    ++MV+ GV  +I++YN +
Sbjct: 555 --------------------GYC-------RVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +       +  AA  L   + K G + +  T+ I++ GLCK  N+    L + + N    
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK-NNLTDEALRM-FQNLCLT 645

Query: 354 DSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           D  LE   +N ++  L K G+ D A ++F +      V + +TY  M  N+     L   
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +L  S   +G  +       +V  L   G
Sbjct: 706 DQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 189/436 (43%), Gaps = 53/436 (12%)

Query: 60  AGYTILNRMREAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           A  +  NRM  AG   ++P V TY  LI    R   L      L  +++ G   +  ++ 
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 117 SLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            L+  L    +  +A + V + M      P   +  I+L GLC    +  AL +   +  
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186

Query: 176 H---GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
               G  P++V+Y  +I G  K G    A     E+ D   +P+ +TY++I+    + + 
Sbjct: 187 DRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               +E+L+ M + G   +   Y +++  +    + KEA  ++++M +DGV+ D+V+YN+
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG---------------- 336
           L++  CK G+   A  + D M K+G E D  T+  L+ G    G                
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 337 -------------------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
                               +  A L    M + G + N+  Y  ++  L K G +D A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 378 NVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             FE M + +  T     Y+S++H+LC   +   A +L+L  L  G+ +         + 
Sbjct: 427 LYFEQM-IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL----NTIFFNS 481

Query: 433 LRHSGCRREAKKIQSK 448
           + HS C +E + I+S+
Sbjct: 482 IIHSHC-KEGRVIESE 496



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 45/270 (16%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C A ++++A  ++     +G+ PD VTYN LI+ YC+    D    +   M  +G+SP+
Sbjct: 521 YCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPN 580

Query: 77  VVTYNSLIAG--------------------------ATRNSLLS--CSLDLLDEMLEM-- 106
           ++TYN ++ G                          +T N +L   C  +L DE L M  
Sbjct: 581 IITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 640

Query: 107 -----GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                 +  +  ++N ++  L ++G+ DEA  +F       L P   T+ +M   +    
Sbjct: 641 NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             +   ++F  ++ +G   +    N +++ L + G +  A   L  + +   +  A T +
Sbjct: 701 LLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS 760

Query: 222 TIMKCC----------FRNRKYKLGLEILS 241
             +             F   KYK  +E LS
Sbjct: 761 LFIDLLSGGKYQEYHRFLPEKYKSFIESLS 790



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P   TY  ++ CC R  +  LG   L  + +KG+  +   +  ++       R  +A D 
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 330
           + + +T+     D+ S   L+   C E + + A  LL  M      G   D  ++T +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G  K G+                D     Y+ ++DR     +I             D  T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR-----RIS-----------PDVVT 233

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           YSS++  LCK + +  A ++L + +K+GV        +++ G   S   +EA     K+R
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 201/380 (52%), Gaps = 7/380 (1%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS-FDAGYTI 64
           N+C C      FC+ ++L  A + +   I+LG  P +VT+  L++ +C+    +DA Y +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY-M 173

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            ++M   G  P+VV YN++I G  ++  +  +LDLL+ M + GI PDV +YNSL+  L  
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+  +A R+   M   ++ P   TFN +++   K      A   +  + +    P++VT
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y++LI GLC   RL  A  +   +   G  P+ +TY+ ++    +++K + G+++   M 
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           ++G   +   Y  +I  + + G+L  A +   +MV  GV  +I++YN L++  C  GK+E
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A ++L +M+K G + D  T+ I+I G+CKAG +  A      +N  G   ++  Y  ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473

Query: 365 DRLGKDGKIDHAINVFESME 384
             L K G    A  +F  M+
Sbjct: 474 LGLYKKGLRREADALFRKMK 493



 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 201/416 (48%), Gaps = 4/416 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +  ++ L+ A  +   +D    +  +M+  GI  ++ T N L+    R S LS +L 
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +M+++G  P + ++ SL++   +  +  +A  +F  M+     P    +N +++GLC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K++  DNAL +   ++K G  P++VTYN LI GLC +GR   A  ++  +      P+  
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+  ++  C +  +     E    M R+    D   Y  +I       RL EA +    M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V+ G   D+V+Y+ LIN YCK  K+E    L  EM ++G   +  T+TILI G C+AG +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A      M   G   N+  YN ++  L  +GKI+ A+ +   M+      D  TY+ +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  +CKA  +  A  +  S    G+         ++ GL   G RREA  +  K++
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 161/314 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + N  +   CK+ +++ A  ++    + G+ PDVVTYN LI   C    +     
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +++ M +  I PDV T+N+LI    +   +S + +  +EM+   + PD+ +Y+ L++ L 
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              + DEA  +F  M+     P   T++I++NG CK++  ++ +++F  + + G V   V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY ILI+G C+AG+L  A  I + +   G  PN ITY  ++     N K +  L IL+ M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++ G   D   Y  +I    K G + +A D    +   G+  DI +Y T++    K+G  
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482

Query: 304 EAAYLLLDEMEKQG 317
             A  L  +M++ G
Sbjct: 483 READALFRKMKEDG 496



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  +RL++AE +    +  G  PDVVTY++LI+ YC+    + G  +   M + G+  +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY  LI G  R   L+ + ++   M+  G+ P++ +YN L+H L   GK ++A  +  
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM    +     T+NI++ G+CK     +A  ++  L   G +P++ TY  ++ GL K G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480

Query: 197 RLRTARWILKELGDSGHAPN 216
             R A  + +++ + G  PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 5/207 (2%)

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           R+ Y+ +G  Y  ++   ++  +L ++ D    MV       I  ++ L++   K  K +
Sbjct: 40  RRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
               L ++M+  G   +  T  IL++  C+   +  A   L  M K+G + ++  +  ++
Sbjct: 99  VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158

Query: 365 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +   +  ++  A+ +F+ M       +   Y++++  LCK+K++ +A  LL    K G+ 
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQS 447
                  +++ GL  SG   +A ++ S
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVS 245


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 11/409 (2%)

Query: 10  LNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           + I VC++       CK   + +A+A++ + +  G  P V+TYN L++ Y +        
Sbjct: 188 IEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVN 247

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            IL+ M +  +  +V TY  LI   +R+S +  +  L DEML+ GI PDV+ Y S+++  
Sbjct: 248 EILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 307

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G    A  +F +M    L P   T+  ++NG CK      A  M   +Q  G     
Sbjct: 308 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNR 367

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V +N L+ G CK G +  A  +   +   G   +A T   I     R+ + +    +L  
Sbjct: 368 VIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLT 427

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ +G   +   +  +I  + K     EA    + M   G    +V+YN  I  YCK+GK
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +E AY L++EM+++G   D YT+T LIDG   +GN+  A      M ++G + N+  Y  
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           I+  L KDG+ D A  +++ M     V D   YSS++ +L K   L S 
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSG 596



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 186/398 (46%), Gaps = 8/398 (2%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           +ML   Y     FD+   + +  R+ G   D  +    +    R+  +   ++ L +M++
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 185

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            GI   V S+ +++  L + G+   A  +  +++C    P   T+N +LNG  + +    
Sbjct: 186 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 245

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
              +   ++K+     + TY +LI+   ++ ++  A  +  E+   G  P+   YT+I+ 
Sbjct: 246 VNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIIN 305

Query: 226 --CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
             C F N K    L     M  +    + + Y  +I    K G +K A   +  M + GV
Sbjct: 306 WNCKFGNMKRAFVL--FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV 363

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
            ++ V +NTL++ YCK+G ++ A  L + M+++GFE D +T  I+  G C++   + A+ 
Sbjct: 364 DVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKR 423

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLC 399
            L  M + G   N+ +++ ++D   K+     A  +F+ ME K       TY++ +   C
Sbjct: 424 LLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYC 483

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           K  ++  A KL+    + G+        +++DG R SG
Sbjct: 484 KKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 35/256 (13%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CKA  ++ AE ++ D    GV  + V +N L+D YC+    D    + N M++ G   D 
Sbjct: 343 CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDA 402

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            T N + +G  R++    +  LL  M E G+ P+V S++ L+    +     EA R+F+ 
Sbjct: 403 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKV 462

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE---------------- 181
           M      P   T+N  +   CK    + A ++   +Q+ G +P+                
Sbjct: 463 MEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGN 522

Query: 182 -------------------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
                              +VTY ++I GL K GR   A  +  E+   G  P+   Y++
Sbjct: 523 VDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSS 582

Query: 223 IMKCCFRNRKYKLGLE 238
           ++    +      GLE
Sbjct: 583 LIASLHKVGPLVSGLE 598



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/347 (21%), Positives = 146/347 (42%), Gaps = 59/347 (17%)

Query: 160 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           N  T + LR F  L Q     P+L  + IL   L +A +    + +LK + + G+  + +
Sbjct: 45  NLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNV 104

Query: 219 TY------------TTIMKCC---FR----NRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
                         + + K C   FR    NR +   LE+    ++KG+  D       +
Sbjct: 105 ERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL 164

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
            A  + G ++   +++ QMV  G+++ + S+  +++  CK+G++  A  L+DE+  +GF+
Sbjct: 165 LALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFK 224

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
               T+  L++G  +  ++ G    L  M K   D N+  Y  +++   +  KI+ A  +
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284

Query: 380 FESME---------------------------------------VKDSFTYSSMVHNLCK 400
           F+ M                                        V +++TY ++++  CK
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           A  + +A  ++      GV + +     ++DG    G   EA ++Q+
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQN 391


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 198/416 (47%), Gaps = 4/416 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+VVTY  LI+  C+  S  A   +L  M +    PDVV Y S+I    ++  ++ +
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L  EM+  GI P +++YNSL+H L  L +      +  +M+   + P    F+ +++ 
Sbjct: 219 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK      A  +   + K G  P +VTYN L+ G C    +  A  +   +   G AP+
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++Y+T++    + ++ +  + +   M RK    +   Y T++     +GRL++A     
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MVT G   D VSY  L++  CK  +L+ A  LL  +E    + D   +TI+IDG+C+AG
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            ++ AR     ++  G   N+  Y  +++ L + G +  A  +F  M+ K    +  TY+
Sbjct: 459 ELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYN 518

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            +     +        +LL   L  G     S    +V+ L   G  +  K+I S+
Sbjct: 519 LITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 205/419 (48%), Gaps = 4/419 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ P++ T N+LI+++C        +++L ++ + G  P++ T+N+LI G      +  
Sbjct: 88  FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 147

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            L L D+M+  G  P+V +Y +L++ L ++G    A R+ + M  G+  P    +  +++
Sbjct: 148 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIID 207

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P + TYN LI  LC     +    +L E+ +S   P
Sbjct: 208 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + ++T++    +  K     +++  M ++G   +   Y  ++        + EA    
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 327

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   D+VSY+TLIN YCK  ++E A  L +EM ++    +  T++ L+ GLC  
Sbjct: 328 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 387

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++ A      M   G   +  +Y  ++D L K+ ++D AI + +++E      D   Y
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  +C+A  L +A  L  +    G+         +++GL   G   EA K+  +++
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  +  + I  G+ P + TYN LI A C    +     +LN M  + I P
Sbjct: 208 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           +VV +++++    +   +  + D++D M++ G+ P+V +YN+LM  HCL    + DEA +
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL--RSEMDEAVK 325

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+C    P   +++ ++NG CK +  + A+ +F  + +   +P  VTY+ L+ GLC
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+ ++Y  ++    +NR+    + +L A++      D  
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 445

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI    + G L+ A D    + + G+  ++ +Y  +IN  C++G L  A  L  EM
Sbjct: 446 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505

Query: 314 EKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +++G+  +  T+ ++  G  +    ++G +L L+ M   GF +++     +V+ L  DG 
Sbjct: 506 KRKGYSPNGCTYNLITRGFLRNNETLRGIQL-LQEMLARGFSADVSTSTVLVEMLSDDG- 563

Query: 373 IDHAI 377
           +D ++
Sbjct: 564 LDQSV 568



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           ++N        F + D   +  NRM      P +  +  L+   T+    S  L L  +M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GIPP++++ N L++    L +   A  V   ++     P  ATFN ++ GLC     
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              L +F  +   GF P +VTY  LI GLCK G    A  +L+ +      P+ + YT+I
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++R+      + S M  +G +   F Y ++I A   +   K  T  + +MV   +
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             ++V ++T+++  CKEGK+  A+ ++D M K+G E +  T+  L+DG C    +  A  
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
             + M   GF  ++ +Y+ +++   K  +I+ A+ +FE M     + ++ TYS+++H LC
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385

Query: 400 KAKRLPSASKLLLSCLKSG 418
              RL  A  L    +  G
Sbjct: 386 HVGRLQDAIALFHEMVTRG 404



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 202/414 (48%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +  +  L+ +  +   +    ++ ++M   GI P++ T N LI        L  +  +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  P++ ++N+L+  L   GK  E   +F  MI     P   T+  ++NGLCK
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R +++    P++V Y  +I  LCK  ++  A  +  E+   G +P+  T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++       ++K    +L+ M       +   + TV+ A  K G++ EA D ++ M+
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ ++V+YN L++ +C   +++ A  + D M  +GF  D  +++ LI+G CK   I+
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M +     N   Y+ ++  L   G++  AI +F  M    ++ D  +Y  ++
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK +RL  A  LL +   S +         V+DG+  +G    A+ + S +
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 470



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 154/304 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +  V   CK  ++ +A  ++   I+ GV P+VVTYN L+D +C     D    + + M
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G +PDVV+Y++LI G  +   +  ++ L +EM    + P+  +Y++LMH L  +G+ 
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F +M+     P   ++ I+L+ LCKNR  D A+ + + ++     P++  Y I+
Sbjct: 391 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G+C+AG L  AR +   L   G  PN  TYT ++    +        ++   MKRKGY
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +G  Y  +   F++          +++M+  G   D+ +   L+ +   +G  ++   
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQ 570

Query: 309 LLDE 312
           +L E
Sbjct: 571 ILSE 574



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 165/326 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C     +   A++ + +   ++P+VV ++ ++DA C+       + +++ M +
Sbjct: 238 NSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK 297

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTYN+L+ G    S +  ++ + D M+  G  PDV SY++L++   ++ + ++
Sbjct: 298 RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEK 357

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M   +L P T T++ +++GLC      +A+ +F  +   G +P+ V+Y IL+ 
Sbjct: 358 AMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 417

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK  RL  A  +LK +  S   P+   YT ++    R  + +   ++ S +  KG   
Sbjct: 418 YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHP 477

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y  +I    + G L EA+    +M   G   +  +YN +   + +  +      LL
Sbjct: 478 NVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 537

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAG 336
            EM  +GF  D  T T+L++ L   G
Sbjct: 538 QEMLARGFSADVSTSTVLVEMLSDDG 563



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 58/132 (43%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++  I +   C+A  LE A  +  +    G+ P+V TY ++I+  CQ         +   
Sbjct: 445 QIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G SP+  TYN +  G  RN+     + LL EML  G   DV +   L+  L   G 
Sbjct: 505 MKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGL 564

Query: 128 PDEANRVFQDMI 139
                ++  + +
Sbjct: 565 DQSVKQILSEFL 576


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 4/380 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +++N        F + D   +  NRM      P  V +N L+    +         L ++
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   GIPPDV++ N L++    L +P  A  V   ++   L P TATF  ++ GLC    
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
             +AL +F  +   GF P +VTY  LI GLCK G    A  +L+ +      P+ + YT+
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           I+    ++R+      + S M  +G + D F Y ++I +   +   K  T  + QM+   
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  D+V ++T+++  CKEGK+  A+ ++D M  +G E +  T+  L+DG C    +  A 
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 398
              + M   G+  N+ +YN +++   K  ++D A  +FE M     + ++ TY++++H L
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392

Query: 399 CKAKRLPSASKLLLSCLKSG 418
           C   RL  A  L    +  G
Sbjct: 393 CHVGRLQDAIALFHEMVAHG 412



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T N+LI+++C        +++L ++ + G+ PD  T+ +LI G      +  
Sbjct: 96  FGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGD 155

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  P+V +Y +L++ L ++G  + A R+ + M  G+  P    +  +++
Sbjct: 156 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 215

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TY  LI  LC     +    +L ++ +S   P
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + ++T++    +  K     +++  M  +G   +   Y  ++        + EA    
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV +G   +++SYNTLIN YCK  +++ A  L +EM ++    +  T+  L+ GLC  
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++ A      M   G   +L  Y  ++D L K   +D A+ + +++E      D   Y
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + ++  +C+A  L +A  +  +    G+R        +++GL   G   EA K+
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 213/478 (44%), Gaps = 39/478 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + +FC  NR   A +++   ++LG+ PD  T+  LI   C          + ++M 
Sbjct: 105 LNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 164

Query: 70  EAGISPDVVTYNSLIAGATR------------------------------NSL-----LS 94
             G  P+VVTY +LI G  +                              +SL     ++
Sbjct: 165 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 224

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + +L  +M+  GI PD+++Y SL+H L  L +      +   MI   + P    F+ ++
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           + LCK      A  +   +   G  P +VTYN L+ G C    +  A  +   +  +G+A
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN I+Y T++    + ++      +   M +K    +   Y T++     +GRL++A   
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +MV  G   D+ +Y  L++  CK+  L+ A  LL  +E    + D   +TI+IDG+C+
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 464

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AG ++ AR     ++  G   N+  Y  +++ L + G +D A  +F  M+      D  T
Sbjct: 465 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCT 524

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           Y+++   L + K    A +LL   L  G     S    +V+ L      +  K+I S+
Sbjct: 525 YNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 209/433 (48%), Gaps = 4/433 (0%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L+ A +     + +   P  V +N L+ +  +   +   +++ N+M   GI PDV T 
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI      +    +  +L ++L++G+ PD  ++ +L+  L   GK  +A  +F  MI 
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P   T+  ++NGLCK   T+ A+R+ R +++    P++V Y  +I  LCK  ++  
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +  ++   G +P+  TYT+++       ++K    +L+ M       D   + TV+ 
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           A  K G++ EA D ++ M+  GV+ ++V+YN L++ +C + +++ A  + D M   G+  
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  ++  LI+G CK   +  A    E M +     N   YN ++  L   G++  AI +F
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405

Query: 381 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
             M    ++ D  TY  ++  LCK   L  A  LL +   S +         V+DG+  +
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465

Query: 437 GCRREAKKIQSKI 449
           G    A+ I S +
Sbjct: 466 GELEAARDIFSNL 478



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 150/304 (49%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +  V   CK  ++ +A  ++   I  GV P+VVTYN L+D +C     D    + + M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G +P+V++YN+LI G  +   +  +  L +EM +  + P+  +YN+LMH L  +G+ 
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F +M+     P  AT+ I+L+ LCK  + D A+ + + ++     P++  Y I+
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G+C+AG L  AR I   L   G  PN  TYT ++    R        ++   M   G 
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + DG  Y T+    ++      A   +++M+  G   D+ +   L+ + C +   ++   
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 578

Query: 309 LLDE 312
           +L E
Sbjct: 579 ILSE 582



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 97/192 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   RL+ A A+  + +  G +PD+ TY +L+D  C+    D    +L  +  + + PD
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 451

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y  +I G  R   L  + D+   +   G+ P+V +Y  +++ L + G  DEAN++F 
Sbjct: 452 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     +P   T+N +  GL +N+    A+++ + +   GF  ++ T  +L++ LC   
Sbjct: 512 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDK 571

Query: 197 RLRTARWILKEL 208
             ++ + IL E 
Sbjct: 572 LDQSVKQILSEF 583


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 210/436 (48%), Gaps = 4/436 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK   ++KA  ++   ++ GV+P+ +TYN ++  YC           L +MR  G+
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYNSL+    +N   + +  + D M + G+ PD+ +Y +L+      G   E + 
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+   + P    FNI++    K    D A+ +F  +++HG  P +VTY  +I  LC
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+G +  A    +++ D G  PN I YT+++       K+    E++  M  +G   +  
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + ++I +  K GR+ E+    + MV  GV+ ++++Y+TLI+ YC  GK++ A  LL  M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G + D  T+  LI+G C+   +  A    + M   G   N+  YN I+  L    + 
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 374 DHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A    + + +S    +  TY+ ++H LCK      A ++  +   + +++       +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 430 VDGLRHSGCRREAKKI 445
           +  L   G   EAK +
Sbjct: 658 IGALLKVGRNDEAKDL 673



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 208/436 (47%), Gaps = 7/436 (1%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
            C  NR ++A  ++    D    G  PDVV+Y  +I+ + +    D  Y+  + M +  I
Sbjct: 168 LCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRI 227

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVVTY+S+IA   +   +  ++++L  M++ G+ P+  +YNS++H      +P EA  
Sbjct: 228 SPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIG 287

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             + M    + P   T+N +++ LCKN  +  A ++F  + K G  P++ TY  L++G  
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L     +L  +  +G  P+   +  ++    +  K    + + S M++ G   +  
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI    K G + +A  Y EQM+ +G+  +I+ Y +LI+  C   K + A  L+ EM
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G   +      +I   CK G +  +    + M +IG   N+  Y+ ++D     GK+
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 374 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +  SM       D  TY+++++  C+  R+  A  L    + SGV         +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 430 VDGLRHSGCRREAKKI 445
           + GL H+     AK++
Sbjct: 588 LQGLFHTRRTAAAKEL 603



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 217/440 (49%), Gaps = 8/440 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + ++ G   + +T+  L+   C    + DA   +L RM E    PD
Sbjct: 98  CRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPD 157

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +   L+ G    +    +L+LL  M +    G  PDV SY ++++  F+ G  D+A  
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   ++P   T++ ++  LCK +  D A+ +   + K+G +P  +TYN ++ G C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            + + + A   LK++   G  P+ +TY ++M    +N +     +I  +M ++G   D  
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            YCT++  +   G L E    ++ MV +G+  D   +N LI  Y K+ K++ A L+  +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G   +  T+  +I  LCK+G++  A L+ E M   G   N+  Y  ++  L    K 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  +   M  +    ++  ++S++H+ CK  R+  + KL    ++ GV+        +
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +DG   +G   EA K+ S +
Sbjct: 518 IDGYCLAGKMDEATKLLSSM 537



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 194/411 (47%), Gaps = 50/411 (12%)

Query: 1   MFGKLSTRLLNICVCTFCK-------ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F  ++ R L   + T+C           L +  A++   +R G+ PD   +N+LI AY 
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +    D    + ++MR+ G++P+VVTY ++I    ++  +  ++   ++M++ G+ P++ 
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            Y SL+H L    K D+A  +  +M+   +   T  FN +++  CK      + ++F  +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            + G  P ++TY+ LI G C AG++  A  +L  +   G  P+ +TY T++         
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN-------- 554

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                               GYC       ++ R+ +A    ++MV+ GV  +I++YN +
Sbjct: 555 --------------------GYC-------RVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +       +  AA  L   + K G + +  T+ I++ GLCK  N+    L + + N    
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK-NNLTDEALRM-FQNLCLT 645

Query: 354 DSNLE--AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 398
           D  LE   +N ++  L K G+ D A ++F ++     V D  TYS M  NL
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 696



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 37/386 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +C + K  ++++A  +     + G+ P+VVTY  +I   C+  S D       +M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G++P+++ Y SLI           + +L+ EML+ GI  +   +NS++H   + G+ 
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T++ +++G C     D A ++   +   G  P+ VTYN L
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG- 247
           I G C+  R+  A  + KE+  SG +PN ITY  I++  F  R+     E+   + + G 
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612

Query: 248 ------YTFDGFGYC----------------------------TVIAAFVKIGRLKEATD 273
                 Y     G C                             +I A +K+GR  EA D
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               +  +G+  D+ +Y+ +     ++G LE    L   ME+ G   +      ++  L 
Sbjct: 673 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 732

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEA 359
           + G+I  A  +L  +++  F  +LEA
Sbjct: 733 QRGDITRAGTYLSMIDEKHF--SLEA 756



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 162/422 (38%), Gaps = 120/422 (28%)

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G +TP   T+ I++   C+    D        + K GF  E +T+  L+KGLC   R   
Sbjct: 81  GKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 201 ARWI--------------------LKELGDS-------------------GHAPNAITYT 221
           A  I                    LK L D                    G AP+ ++YT
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 222 TIMKCCFR----NRKYKL-------------------------------GLEILSAMKRK 246
           T++   F+    ++ Y                                  +E+L+ M + 
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y +++  +    + KEA  ++++M +DGV+ D+V+YN+L++  CK G+   A
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------------ 336
             + D M K+G E D  T+  L+ G    G                              
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380

Query: 337 -----NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT- 390
                 +  A L    M + G + N+  Y  ++  L K G +D A+  FE M + +  T 
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM-IDEGLTP 439

Query: 391 ----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
               Y+S++H+LC   +   A +L+L  L  G+ +         + + HS C +E + I+
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL----NTIFFNSIIHSHC-KEGRVIE 494

Query: 447 SK 448
           S+
Sbjct: 495 SE 496



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P   TY  ++ CC R  +  LG   L  + +KG+  +   +  ++       R  +A D 
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 330
           + + +T+     D+ S   L+   C E + + A  LL  M      G   D  ++T +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G  K G+                D     Y+ ++DR     +I             D  T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR-----RIS-----------PDVVT 233

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           YSS++  LCK + +  A ++L + +K+GV        +++ G   S   +EA     K+R
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR 293


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 224/511 (43%), Gaps = 75/511 (14%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA R+++A  +  +      +P V  YN +I  Y     F+  Y++L R +  G 
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V+ YN ++    R   +  +L +L+ M +M   P++ SYN L+  L + G+ + A +
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M    L P   T NIM++ LCK +  D A  +F GL      P+ VT+  LI GL 
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTI------------------------------ 223
           + G++  A  + +++ DSG  PNA+ YT++                              
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 224 -----MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                M C F+  + + G  +   +K +G T D   Y  +I   VK G  K+      +M
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT-------------- 324
              G+ LD  +YN +I+ +CK GK+  AY LL+EM+ +G +    T              
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 325 ---------------------HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                                ++ LIDG  K G I  A L LE + + G   N   +NC+
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K  +ID A+  F++M+      +  TYS MV+ LCK ++   A        K G+
Sbjct: 733 LDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGL 792

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +        ++ GL   G   EAK +  + +
Sbjct: 793 KPNTITYTTMISGLARVGNVLEAKDLFERFK 823



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 225/486 (46%), Gaps = 40/486 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA  LE A  +       G+ P+++T N++ID  C+    D   +I   +  
Sbjct: 415 NILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDH 474

Query: 71  AGISPDVVTYNSLI---------------------AGATRNSLLSCSL------------ 97
              +PD VT+ SLI                     +G T N+++  SL            
Sbjct: 475 KVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKED 534

Query: 98  --DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
              +  EM+  G  PD+   N+ M C+F+ G+ ++   +F+++    LTP   +++I+++
Sbjct: 535 GHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIH 594

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL K  ++ +  ++F  +++ G   +   YNI+I G CK+G++  A  +L+E+   G  P
Sbjct: 595 GLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQP 654

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             +TY +++    +  +      +    K K    +   Y ++I  F K+GR+ EA   +
Sbjct: 655 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLIL 714

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+++  G+  +  ++N L++   K  +++ A +    M+      ++ T++I+++GLCK 
Sbjct: 715 EELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKV 774

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
                A +  + M K G   N   Y  ++  L + G +  A ++FE  +    + DS  Y
Sbjct: 775 RKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACY 834

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR- 450
           ++M+  L  A +   A  L       G RI       ++D L  + C  +A  + + +R 
Sbjct: 835 NAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLRE 894

Query: 451 MAKISH 456
           MAK  H
Sbjct: 895 MAKSQH 900



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 176/410 (42%), Gaps = 42/410 (10%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V +F K+ +L +A  +I    +    P    Y  LI A       D   T+L +M+E G 
Sbjct: 174 VASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGY 233

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
              V  + +LI    R   +  +L LLDEM       D+  YN  + C  ++GK D A +
Sbjct: 234 EVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWK 293

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F ++    L P   TF  M+  LCK    D A+ +F  L  +  VP +  YN +I G  
Sbjct: 294 FFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYG 353

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G+   A  +L+     G  P+ I Y  I+ C  R  K +  L IL AMK         
Sbjct: 354 SVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAP---- 409

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
                                           ++ SYN LI++ CK G+LEAA  + D M
Sbjct: 410 --------------------------------NLTSYNILIDMLCKAGELEAALKVQDSM 437

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           ++ G   +  T  I+ID LCKA  +  A  + L   +K+    ++  +  ++D LG+ GK
Sbjct: 438 KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV-TFCSLIDGLGRHGK 496

Query: 373 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++ A  ++E M    +  ++  Y+S++ N  K  R     K+    +  G
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 117/221 (52%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TR  NI +  FCK+ ++ KA  ++ +    G+ P VVTY  +ID   +    D  Y +
Sbjct: 619 LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYML 678

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +   +  +VV Y+SLI G  +   +  +  +L+E+++ G+ P+ +++N L+  L +
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVK 738

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + DEA   FQ+M      P   T++IM+NGLCK R  + A   ++ +QK G  P  +T
Sbjct: 739 AEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 798

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL + G +  A+ + +    SG  P++  Y  +++
Sbjct: 799 YTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIE 839



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 3/309 (0%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN+L+  + +    +   ++ ++M      P   T   M+    K+R    A  +   +
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +K  F P    Y  LI  L  A        +L+++ + G+      +TT++    R  + 
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L +L  MK   +  D   Y   I  F K+G++  A  +  ++ + G+  D V++ ++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I + CK  +++ A  L +E++        Y +  +I G    G    A   LE   + G 
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLCKAKRLPSASKL 410
             ++ AYNCI+  LG+ GK++ A+ + E+M++  +    +Y+ ++  LCKA  L +A K+
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKV 433

Query: 411 LLSCLKSGV 419
             S  ++G+
Sbjct: 434 QDSMKEAGL 442



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 64/132 (48%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +    KA  +++A     +   L   P+ VTY+++++  C+   F+  +   
Sbjct: 725 NTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW 784

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M++ G+ P+ +TY ++I+G  R   +  + DL +     G  PD   YN+++  L   
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844

Query: 126 GKPDEANRVFQD 137
            K  +A  +F++
Sbjct: 845 NKAMDAYILFEE 856


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 222/474 (46%), Gaps = 45/474 (9%)

Query: 17  FCKANRLEKA-----EAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMRE 70
            C  NR ++A       ++ D  R G  PDVV+YN +I+    +    D  Y + ++M +
Sbjct: 172 LCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLD 231

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SPDVVTYNS+I+  ++   +  +  +L  M++ G  P+  ++NSL+H     GKP++
Sbjct: 232 QGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPND 291

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF+ M    + P   T+N ++  LCKN  +  A ++F  + K G  P   TY  L+ 
Sbjct: 292 AIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLH 351

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G L     +L  +  +G  P+   +  ++    ++ K    + + S M+R+G   
Sbjct: 352 GYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNP 411

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS--------------------- 289
           D   Y  V+ A   +G++ +A     +++++G+  D V                      
Sbjct: 412 DTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELA 471

Query: 290 --------------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                         +NTL+N  CKEG +  A  + D M +   + D  T+  LIDG C  
Sbjct: 472 VEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLH 531

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTY 391
           G +  A   LE M   G   N   YN +++   K+G+I+ A ++F  M  K       TY
Sbjct: 532 GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTY 591

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S+++  L +A+R  +A +L L  +KSG++        ++ GL  + C  +A +I
Sbjct: 592 STILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRI 645



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 203/448 (45%), Gaps = 39/448 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    KA  ++KA  +++  ++ G +P+ +T+N L+  YC     +    +  RM  
Sbjct: 242 NSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCR 301

Query: 71  AGISPDVVTYNSLIA---------------------GATRNSLLSCSL------------ 97
            G+ PDV TYN+L+                      G   NS    +L            
Sbjct: 302 DGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVK 361

Query: 98  --DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
              LLD M+  GI PD + +N L+    + GK D+A  +F  M    L P T T+ I+++
Sbjct: 362 MHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMD 421

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC     D+A+  F  L   G  P+ V +  LI GLC   +   A  +  E+   G  P
Sbjct: 422 ALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP 481

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I + T++    +         I   M R     D   Y T+I  +   G++ EA   +
Sbjct: 482 NNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLL 541

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E MV DGV+ + V+YNT+IN YCK G++E A+ L  +M  +G      T++ ++ GL +A
Sbjct: 542 EGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
                A+    +M K G   ++  YN I+  L ++   D A+ +F+++ + D    + T+
Sbjct: 602 RRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTF 661

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + M+  L K  R   A  L  S L  G+
Sbjct: 662 NIMIDALLKGGRHDEAKDLFASLLARGL 689



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 218/478 (45%), Gaps = 50/478 (10%)

Query: 4   KLSTRLLNICVCTFC--KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           K+   L+   V   C  +   L+ A A +   IR G   + +T++ L+ A C        
Sbjct: 86  KVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEA 145

Query: 62  YTI-LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-----EMGIPPDVWSY 115
             I L RM   G +P+V +Y  L+ G    +    +L LL  M+       G PPDV SY
Sbjct: 146 MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205

Query: 116 NSLMHCLFQLGKP-DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           N++++ L + G+  D A  +F  M+   L+P   T+N +++ L K R  D A  +   + 
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           K+G +P  +T+N L+ G C +G+   A  + K +   G  P+  TY T+M    +N +  
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              +I  +M ++G+  +   Y T++  +   G L +    ++ MV +G+Q D   +N LI
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI---------------- 338
             Y K GK++ A LL  +M +QG   D  T+ I++D LC  G +                
Sbjct: 386 GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLT 445

Query: 339 --------------------KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
                               K   L +E + + G   N   +N +++ L K+G +  A N
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMIGR-GICPNNIFFNTLLNHLCKEGMVARAKN 504

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +F+ M      +D  TY++++   C   ++  A+KLL   +  GV+  +     +++G
Sbjct: 505 IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMING 562



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 172/368 (46%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI + T+ K  +++ A  +     R G+ PD VTY +++DA C     D       R+
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++PD V + +LI G         + +L  EM+  GI P+   +N+L++ L + G  
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  +F  M+  D+     T+N +++G C +   D A ++  G+   G  P  VTYN +
Sbjct: 500 ARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTM 559

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G CK GR+  A  + +++   G  P  +TY+TI++  F+ R+     E+   M + G 
Sbjct: 560 INGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGI 619

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            FD   Y  ++    +     +A    + +      L+  ++N +I+   K G+ + A  
Sbjct: 620 KFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKD 679

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +  +G   +  T+ +++  L + G ++        + K G  +N    N +V +L 
Sbjct: 680 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLL 739

Query: 369 KDGKIDHA 376
           + G++  A
Sbjct: 740 QKGEVRKA 747


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 191/398 (47%), Gaps = 4/398 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V  +  LID       F+    +  ++ + G   D   YN LI    R+  L  ++++
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM   G  PD ++Y  L++ L + G+  EA   F  M+   LTP   T+N++++   K
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D AL +F  +++ GF P +VTYNIL+  LC AGR+  AR +  ++   G +P++ T
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    ++ + +   ++   M  +G   D   Y +++A   K G +      M++M 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D  S+NT+++   K  K +AA  +   M + G + D  ++ ILID   + G+  
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAA 362

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            AR  LE M + GF    + YN ++  L  DG++D A  V E ME      D  TY+ ++
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             L K      A++L       GV     +    +DGL
Sbjct: 423 DMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 205/435 (47%), Gaps = 8/435 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T+L++I V     +   E+AE +    ++ G   D   YN+LI  + +    D+   +  
Sbjct: 69  TKLIDILV----NSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G  PD  TY  L+    +   +  +    D MLE G+ P++ +YN LM    ++G
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D A  +F +M      P   T+NI+L+ LC       A ++F  +   G  P+  TY+
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ GL K+GR+  A  + +E+ D G A + + Y +++    +        +++  M RK
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+  D F + T++ A  K  +   A +   +MV  G + D++SYN LI+ Y + G    A
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQA 364

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +L+EM + GF  +  T+  LI  L   G +  A   LE M   G   ++  YN ++D 
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDM 424

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           LGK G+   A  +F+ M+ K    D+ +Y+  +  L    RL  A  L       G  + 
Sbjct: 425 LGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVD 484

Query: 423 KSAQKAVVDGLRHSG 437
           K+  + ++     +G
Sbjct: 485 KAMYRILIRAAHRAG 499



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 162/329 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  F K  +L+ A  +  +  R G  P VVTYN+L+DA C      A   + ++M  
Sbjct: 174 NLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTG 233

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPD  TY++L+ G  ++  +  +  +  EM++ G+  D+ +YNSL+  L + G  D 
Sbjct: 234 DGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDR 293

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++ ++M      P   +FN +++ L K    D A  +F  + + G  P+L++YNILI 
Sbjct: 294 VWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILID 353

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              + G    AR +L+E+ ++G  P   TY +++     + +      +L  M+  G   
Sbjct: 354 SYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRP 413

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  ++    K G  + A    +QM   GV+ D +SY   I+    + +L+ A +L 
Sbjct: 414 DVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLF 473

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +M+  G   DK  + ILI    +AG+ +
Sbjct: 474 KDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 39/360 (10%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           T+L  M   G      T   LI    R +    + DL ++       P V ++  L+  L
Sbjct: 16  TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDIL 75

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              G+ + A  V++ ++          +N+++    ++   D+A+ MFR ++  G  P+ 
Sbjct: 76  VNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDE 135

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            TY  L+  L KAGR++ AR     + + G  PN  TY  +M                  
Sbjct: 136 YTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD----------------- 178

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                             AF K+G+L  A     +M   G Q  +V+YN L++  C  G+
Sbjct: 179 ------------------AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           + AA  L  +M   G   D YT++ L++GL K+G ++ A      M   G   +L  YN 
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++  L K G +D    + + M  K    D+F++++++  L KA +  +A ++    ++SG
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 153/336 (45%), Gaps = 4/336 (1%)

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           ++  L   G  D    + ++M+         T   ++    +   + +A  +F   +   
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P +  +  LI  L  +G    A  + K+L   G   +   Y  +++   R+ +    +
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           E+   MK KG   D + Y  ++ A  K GR++EA  + + M+  G+  +I +YN L++ +
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
            K G+L+ A  L  EM+++GF+    T+ IL+D LC AG +  AR     M   G   + 
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
             Y+ +V+ LGK G+++ A  VF  M  +    D   Y+S++  L KA  +    KL+  
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             + G      +   ++D L  +     A+++ +++
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 228/463 (49%), Gaps = 25/463 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   +L KAE+++   ++   LP+ VTYN +++ Y +     +   IL+ M +
Sbjct: 234 NIVLNSLCTQGKLSKAESML-QKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  D+ TYN +I    +    + +  LL  M E+ + PD  SYN+L+H  F  GK + 
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ---------------- 174
           A  +F  M+   L P  AT+  +++G C+N  TD A R+   +Q                
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 175 ----KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
                 G  P+++TY+ LI G+CK G +   + IL  +  SG  PN + YTT++    + 
Sbjct: 413 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 472

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
              K  L+    + R G   +   +  ++ +F + G + EA  + + M    +  D+ S+
Sbjct: 473 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 532

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N +I+ YC+ G +  A+ + D M + G+  D  T+  L+ GLC+ G++  A+  + Y+ +
Sbjct: 533 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 592

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
                + +  N ++  + K G +D A+++ E M  +    D++TY+ ++   CK  ++  
Sbjct: 593 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVP 652

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           A  LL   L+ G+     A   +++GL + G  + A  +  +I
Sbjct: 653 ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 695



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 216/439 (49%), Gaps = 15/439 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +C+F +   + +AE       R+ +  DV ++N +ID+YCQ  +    +++ + M  
Sbjct: 498 NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 557

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+ TY SL+ G  +   L  + + +  +LE     D  + N+L+  + + G  DE
Sbjct: 558 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 617

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M+  ++ P T T+ I+L+G CK      AL + + + + G VP+ + Y  L+ 
Sbjct: 618 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLN 677

Query: 191 GLCKAGRLRTARWILKE-LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           GL   G+++ A ++ +E +   G   + I Y ++M    +  +      ++  M      
Sbjct: 678 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 737

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  ++  ++K G+L         MV +G++ D V+Y  LI   C+ G +E A   
Sbjct: 738 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 797

Query: 310 LDEM--EKQGFECDKYTHTI-LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           L++M  E+ G +  K+TH I LI+  C+ G+I GA    E M  +G   +  A + IV  
Sbjct: 798 LEKMVLEESGLQ-PKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 856

Query: 367 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA---SKLLLSCLKSGV 419
           L K GK++ AI VF S+     V    T+++++H LCK  ++  A    +L+ SC   G+
Sbjct: 857 LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC---GL 913

Query: 420 RILKSAQKAVVDGLRHSGC 438
           ++       ++ GL +  C
Sbjct: 914 KVDVVTYNVLITGLCNKKC 932



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 3/383 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +  + LN  +   CK   L++A  +    +   +LPD  TY +L+D +C+         +
Sbjct: 597 IDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALIL 656

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLF 123
           L  M E G+ PD + Y  L+ G      +  +  +  E++ + G+  D  +YNS+M+   
Sbjct: 657 LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 716

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ +E  R+ ++M   ++ P +A++NI+++G  K       L ++R + K G  P+ V
Sbjct: 717 KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 776

Query: 184 TYNILIKGLCKAGRLRTARWILKE--LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           TY +LI GLC+ G +  A   L++  L +SG  P    Y  ++    R        E+  
Sbjct: 777 TYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKE 836

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            MK  G         +++    K G+++EA      ++  G+   I ++ TL++  CKE 
Sbjct: 837 DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 896

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K++ A+ L   ME  G + D  T+ +LI GLC    I  A    E M   G   N+  Y 
Sbjct: 897 KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 956

Query: 362 CIVDRLGKDGKIDHAINVFESME 384
            +   +   G +     + + +E
Sbjct: 957 TLTGAMYATGTMQDGEKLLKDIE 979



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 196/439 (44%), Gaps = 40/439 (9%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           T  +   + KA+ I+   +  G+ PDV+TY+ LI+  C+         IL+RM+++G+ P
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 457

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + V Y +L+    +      +L    ++   G+  +   +N+L+   ++ G   EA +  
Sbjct: 458 NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFK 517

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q M    ++   A+FN +++  C+      A  ++  + +HG+ P++ TY  L++GLC+ 
Sbjct: 518 QYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQG 577

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G L  A+                                   E +  +  K    D    
Sbjct: 578 GHLVQAK-----------------------------------EFMVYLLEKACAIDEKTL 602

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T++    K G L EA D  E+MVT  +  D  +Y  L++ +CK GK+  A +LL  M +
Sbjct: 603 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLE 662

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +G   D   +T L++GL   G +K A  +  E + K G  ++  AYN +++   K G+I+
Sbjct: 663 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 722

Query: 375 H----AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
                  N+ E+     S +Y+ ++H   K  +L     L    +K G++      + ++
Sbjct: 723 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 782

Query: 431 DGLRHSGCRREAKKIQSKI 449
            GL   G    A K   K+
Sbjct: 783 FGLCEYGLIEIAVKFLEKM 801



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 177/385 (45%), Gaps = 14/385 (3%)

Query: 14  VCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +CT+       C+   L +A+  ++  +      D  T N L+   C+  + D    +  
Sbjct: 564 ICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE 623

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M    I PD  TY  L+ G  +   +  +L LL  MLE G+ PD  +Y  L++ L   G
Sbjct: 624 KMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG 683

Query: 127 KPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +   A+ +FQ++IC  G    C A +N M+NG  K    +   R+ R + ++   P   +
Sbjct: 684 QVKAASYMFQEIICKEGLYADCIA-YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 742

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM- 243
           YNIL+ G  K G+L    ++ +++   G  P+ +TY  ++         ++ ++ L  M 
Sbjct: 743 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 802

Query: 244 -KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            +  G       Y  +I A  ++G +  A +  E M   GV    V+ ++++   CK GK
Sbjct: 803 LEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGK 862

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL-EYMNKIGFDSNLEAYN 361
           +E A ++   + + G      T T L+ GLCK   I  A  HL + M   G   ++  YN
Sbjct: 863 VEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA-FHLKQLMESCGLKVDVVTYN 921

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK 386
            ++  L     I  A++++E M+ K
Sbjct: 922 VLITGLCNKKCICDALDLYEEMKSK 946



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 123/244 (50%), Gaps = 2/244 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S+   NI +  + K  +L +   +  D ++ G+ PD VTY +LI   C++   +     L
Sbjct: 739 SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 798

Query: 66  NRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +M   E+G+ P    Y +LI    R   +  + +L ++M  +G+ P   + +S++  L 
Sbjct: 799 EKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 858

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + GK +EA  VF  ++   + P  ATF  +++GLCK    D+A  + + ++  G   ++V
Sbjct: 859 KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 918

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN+LI GLC    +  A  + +E+   G  PN  TY T+    +     + G ++L  +
Sbjct: 919 TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 978

Query: 244 KRKG 247
           + +G
Sbjct: 979 EDRG 982



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 167/375 (44%), Gaps = 33/375 (8%)

Query: 109 PPDVWSYNSLMHCLFQLGKP-DEANRVFQDMICG---DLTPCTATFNIMLNGLCKNRYTD 164
           P +++S + L++   + GK  D A  +F    CG    L  C    N ++ G+ K+ Y  
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALV-GINKSEYV- 214

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
             L +   L +  F  ++ T NI++  LC  G+L  A  +L+++ +    PNA+TY TI+
Sbjct: 215 -WLFLKESLDRK-FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNC-RLPNAVTYNTIL 271

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  + K  L IL  M++ G   D + Y  +I    K+ R   A   +++M    + 
Sbjct: 272 NWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLT 331

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D  SYNTLI+ +  EGK+  A  + ++M +Q  +    T+T LIDG C+ G    AR  
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391

Query: 345 LEYMNKIG--------------------FDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           L  M   G                     D ++  Y+ +++ + K G I     +   M+
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451

Query: 385 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
               + ++  Y+++V   CKA     A K  +   +SG+        A++      G   
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511

Query: 441 EAKKIQSKIRMAKIS 455
           EA++ +  +   KIS
Sbjct: 512 EAEQFKQYMSRMKIS 526



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 3/291 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D + YN +++ Y +    +    ++  M E  + P   +YN L+ G  +   LS +
Sbjct: 700 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 759

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD--LTPCTATFNIML 154
           L L  +M++ GI PD  +Y  L+  L + G  + A +  + M+  +  L P    +  ++
Sbjct: 760 LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALI 819

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N  C+    D A  +   ++  G VP  V  + +++GLCK G++  A  +   +  +G  
Sbjct: 820 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 879

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P   T+TT+M    +  K      +   M+  G   D   Y  +I        + +A D 
Sbjct: 880 PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 939

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
            E+M + G+  +I +Y TL       G ++    LL ++E +G     Y H
Sbjct: 940 YEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI-VPSYKH 989


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 229/478 (47%), Gaps = 36/478 (7%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R   + +  +C+  +++ A  ++ + +RLG+  ++   N LI+ YC+         ++ R
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + PD  +YN+L+ G  R    S + +L D+ML+ GI P V +YN+L+  L ++G 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A +++  M+   + P    ++ +L+GL K    + A  +++ +   GF    +T+N 
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G++  A  I  ++ D G +P+ ITY T++    +        ++  AM+R+ 
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            +     Y ++I+   K  RL E TD + +M   G+  +IV+Y  LI+ +CKEG L+ A+
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--------- 358
               EM + G   +    + ++ GL + G I  A L ++ M   GF  + E         
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692

Query: 359 -----------------------AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
                                   YN  +  L K GK+D A   F  + +K    D+FTY
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +++H    A  +  A +L    L+ G+        A+++GL  S     A+++  K+
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 226/512 (44%), Gaps = 72/512 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   + +AE +I   +   + PD  +YN L+D YC+       + + ++M +
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P V+TYN+L+ G  R      +L +   M++ G+ PD   Y++L+  LF++   + 
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +++D++    T    TFN M++GLCK      A  +F  ++  G  P+ +TY  LI 
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKA  +  A  +   +     +P+   Y +++   F++R+     ++L+ M  +G T 
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610

Query: 251 DGF-------GYC----------------------------TVIAAFVKIGRLKEATDYM 275
           +         G+C                            T+++   ++GR+ EA   M
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670

Query: 276 EQMVTDG--------VQLDI------------------------VSYNTLINLYCKEGKL 303
           ++MV  G        ++ DI                        + YN  I   CK GK+
Sbjct: 671 QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A      +  +GF  D +T+  LI G   AGN+  A    + M + G   N+  YN +
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K   +D A  +F  +  K  F    TY++++   CK   + +A KL    ++ G+
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850

Query: 420 RILKSAQKAVVDGL-RHSGCRREAKKIQSKIR 450
                   A+++GL +H    R  K +   I+
Sbjct: 851 SPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 40/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +++I V  FCK  ++++A   +     LGV P++VTY+ LI+ Y      +A   +L  M
Sbjct: 228 MVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 69  REAGISPDVVTYN------------------------------------SLIAGATRNSL 92
            E G+S +VVTY                                      LI G  R   
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  ++ LLDEML +G+  +++  NSL++   + G+  EA  V   M+  +L P + ++N 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L+G C+  +T  A  +   + + G  P ++TYN L+KGLC+ G    A  I   +   G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            AP+ + Y+T++   F+   ++    +   +  +G+T     + T+I+   K+G++ EA 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M   G   D ++Y TLI+ YCK   +  A+ +   ME++        +  LI GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            K+  +      L  M   G   N+  Y  ++D   K+G +D A + +  M       + 
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              S+MV  L +  R+  A+ L+   +  G
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHG 677



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 183/409 (44%), Gaps = 32/409 (7%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  ++ +AE I      LG  PD +TY  LID YC+  +    + +   M 
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              ISP +  YNSLI+G  ++  L    DLL EM   G+ P++ +Y +L+    + G  D
Sbjct: 570 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL------- 182
           +A   + +M    L+      + M++GL +    D A  + + +  HGF P+        
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 183 -------------------------VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
                                    + YNI I GLCK G++  AR     L   G  P+ 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++              +   M R+G   +   Y  +I    K   +  A     +
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           +   G+  ++V+YNTLI+ YCK G ++AA+ L D+M ++G      T++ LI+GLCK G+
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           I+ +   L  M K G DS L  Y  +V    + G++     +++ M ++
Sbjct: 870 IERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 204/444 (45%), Gaps = 18/444 (4%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K    E A  +  D +  G     +T+N +I   C+         I ++M++ G SPD +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY +LI G  + S +  +  +   M    I P +  YNSL+  LF+  +  E   +  +M
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 603

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               LTP   T+  +++G CK    D A   +  + ++G    ++  + ++ GL + GR+
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILSAMKRKGYTF---DGFG 254
             A  +++++ D G  P+        +C  ++  +Y    +I  ++     TF   +   
Sbjct: 664 DEANLLMQKMVDHGFFPDH-------ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 716

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y   IA   K G++ +A  +   +   G   D  +Y TLI+ Y   G ++ A+ L DEM 
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           ++G   +  T+  LI+GLCK+ N+  A+     +++ G   N+  YN ++D   K G +D
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  + + M  +       TYS++++ LCK   +  + KLL   +K+GV         +V
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896

Query: 431 DGLRHSGCRREAKKIQSKIRMAKI 454
            G   SG   E +KI     M  I
Sbjct: 897 QGYIRSG---EMQKIHKLYDMMHI 917



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 207/484 (42%), Gaps = 40/484 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  N  +    K      A  +    IR+G++PDV   +++++A+C+    D     +
Sbjct: 190 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 249

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M   G+ P++VTY+SLI G      +  +  +L  M E G+  +V +Y  L+    + 
Sbjct: 250 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 126 GKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            K DEA +V + M     L P    + ++++G C+    D+A+R+   + + G    L  
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 185 YNILIKGLCKAGRLRTARWILKELGD-------------------SGHA----------- 214
            N LI G CK G +  A  ++  + D                    GH            
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 215 -----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
                P  +TY T++K   R   +   L+I   M ++G   D  GY T++    K+   +
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A+   + ++  G     +++NT+I+  CK GK+  A  + D+M+  G   D  T+  LI
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CKA N+  A      M +     ++E YN ++  L K  ++    ++   M ++   
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 609

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +  TY +++   CK   L  A        ++G+         +V GL   G   EA  +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669

Query: 446 QSKI 449
             K+
Sbjct: 670 MQKM 673



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 198/414 (47%), Gaps = 14/414 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRM----REAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           N L+D  C+F   D G  I + +    RE   SP V  ++ ++       L   +L + D
Sbjct: 126 NQLVD-LCKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFD 180

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M + G  P + S NSL++ L + G+   A+ V+Q MI   + P     +IM+N  CK+ 
Sbjct: 181 NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG 240

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A    + ++  G  P +VTY+ LI G    G +  A+ +LK + + G + N +TYT
Sbjct: 241 KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT 300

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            ++K   +  K     ++L  M+ +     D   Y  +I  + + G++ +A   +++M+ 
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 360

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ ++   N+LIN YCK G++  A  ++  M     + D Y++  L+DG C+ G+   
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A    + M + G +  +  YN ++  L + G  D A+ ++  M  +    D   YS+++ 
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 480

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            L K +    AS L    L  G    +     ++ GL   G   EA++I  K++
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 182/379 (48%), Gaps = 5/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P + + N L++   +       + +  +M   GI PDV   + ++    ++  +  +
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              + +M  +G+ P++ +Y+SL++    LG  + A  V + M    ++    T+ +++ G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305

Query: 157 LCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            CK    D A ++ RG+Q+    VP+   Y +LI G C+ G++  A  +L E+   G   
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 365

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N     +++    +  +      +++ M       D + Y T++  + + G   EA +  
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+ +G++  +++YNTL+   C+ G  + A  +   M K+G   D+  ++ L+DGL K 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 485

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            N +GA    + +   GF  +   +N ++  L K GK+  A  +F+ M+      D  TY
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 392 SSMVHNLCKAKRLPSASKL 410
            +++   CKA  +  A K+
Sbjct: 546 RTLIDGYCKASNVGQAFKV 564


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 213/444 (47%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  R+++A  +++     G  PDV++Y+ +++ YC+F   D  + ++  M+ 
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+   Y S+I    R   L+ + +   EM+  GI PD   Y +L+    + G    
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A++ F +M   D+TP   T+  +++G C+      A ++F  +   G  P+ VT+  LI 
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAG ++ A  +   +  +G +PN +TYTT++    +        E+L  M + G   
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y +++    K G ++EA   + +    G+  D V+Y TL++ YCK G+++ A  +L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G +    T  +L++G C  G ++     L +M   G   N   +N +V +    
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +  A  +++ M  +    D  TY ++V   CKA+ +  A  L       G  +  S  
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G        EA+++  ++R
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMR 693



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 6/400 (1%)

Query: 26  AEAIII--DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           A AII+  +   +GV  +V +YN++I   CQ       + +L  M   G +PDV++Y+++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           + G  R   L     L++ M   G+ P+ + Y S++  L ++ K  EA   F +MI   +
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P T  +  +++G CK      A + F  +      P+++TY  +I G C+ G +  A  
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +  E+   G  P+++T+T ++    +    K    + + M + G + +   Y T+I    
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K G L  A + + +M   G+Q +I +YN+++N  CK G +E A  L+ E E  G   D  
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+T L+D  CK+G +  A+  L+ M   G    +  +N +++     G ++    +   M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             K    ++ T++S+V   C    L +A+ +       GV
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 35/401 (8%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+  +L +AE    + IR G+LPD V Y  LID +C+     A       M    I+PDV
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY ++I+G  +   +  +  L  EM   G+ PD  ++  L++   + G   +A RV   
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI    +P   T+  +++GLCK    D+A  +   + K G  P + TYN ++ GLCK+G 
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDG 252
           +  A  ++ E   +G   + +TYTT+M    ++ +     EIL  M  KG      TF+ 
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566

Query: 253 F--GYC------------------------TVIAAFVKI----GRLKEATDYMEQMVTDG 282
              G+C                        T   + VK       LK AT   + M + G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           V  D  +Y  L+  +CK   ++ A+ L  EM+ +GF     T+++LI G  K      AR
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              + M + G  ++ E ++   D   K  + D  ++  + +
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 44/382 (11%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY-T 163
           + G  P V  ++     L   G   EA RVF+ M+   L     + N+ L  L K+ Y T
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A+ +FR   + G    + +YNI+I  +C+ GR++ A  +L  +   G+ P+ I+Y+T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    R  +     +++  MKRKG   + + Y ++I    +I +L EA +   +M+  G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK---------------------------- 315
             D V Y TLI+ +CK G + AA     EM                              
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407

Query: 316 -------QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
                  +G E D  T T LI+G CKAG++K A R+H  +M + G   N+  Y  ++D L
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGL 466

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+G +D A  +   M       + FTY+S+V+ LCK+  +  A KL+     +G+    
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                ++D    SG   +A++I
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEI 548



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 53/120 (44%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V  +C  N L+ A AI  D    GV PD  TY  L+  +C+  +    + +   M+
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G S  V TY+ LI G  +      + ++ D+M   G+  D   ++      ++  +PD
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 218/452 (48%), Gaps = 5/452 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +NI V   CKAN+LE+A  I       G  P+ VTY  LID   +    D  Y +  +M 
Sbjct: 423 VNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKML 482

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +AG   + + Y SLI     +        +  EM+  G  PD+   N+ M C+F+ G+ +
Sbjct: 483 DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVE 542

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +   +F+DM      P   +++I+++GL K         +F+ + + GF  +   YN ++
Sbjct: 543 KGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVV 602

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK+G++  A  +L+E+      P   TY +I+    +  +      +    K KG  
Sbjct: 603 DGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIE 662

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y ++I  F K+GR+ EA   +E+M+  G+  ++ ++N+L++   K  +++ A + 
Sbjct: 663 LNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALIC 722

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M++     + YT++ILI+GLC+      A +  + M K G   N+  Y  ++  L K
Sbjct: 723 FQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAK 782

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G I  A ++FE  +    + DS ++++++  +  A R   A ++       G R+    
Sbjct: 783 VGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKT 842

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI-RMAKISH 456
             +++D L  + C  +A  + + +  +AK  H
Sbjct: 843 CISLLDALNKTECLEQAAIVGAVLSEIAKSQH 874



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 212/480 (44%), Gaps = 75/480 (15%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   CKA RL +AE +         +P    YN +I  Y     FD  Y +L R+RE G 
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGC 347

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV++NS++    +   +  +L L D M +    P++ +YN ++  L   G+ +EA +
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYK 406

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M    L P   + NIM++ LCK    + A R+F    + G  P  VTY  LI GL 
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLG 466

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           K G++  A  + +++ D+GH  N I YT                                
Sbjct: 467 KKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLT 526

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  I   MK  G+  D   Y  +I    K G+ +E ++  + M
Sbjct: 527 LLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM 586

Query: 279 VTDGVQLDIVSYNTLINLYCKEGK-----------------------------------L 303
              G  LD  +YN +++  CK GK                                   L
Sbjct: 587 SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRL 646

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + AY+L +E + +G E +   ++ LIDG  K G I  A L LE M K G   N+  +N +
Sbjct: 647 DEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 706

Query: 364 VDRLGKDGKIDHAINVFESM-EVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K  +ID A+  F+SM E+K   +++TYS +++ LC+ ++   A        K G+
Sbjct: 707 MDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 206/480 (42%), Gaps = 40/480 (8%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V T  ++ RLE A  +I     L   P    Y +LI A  +    +    +L +M++ G 
Sbjct: 148 VATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGY 207

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
              V  + +L+    R   +  +L L+DE+    + PD+  YN  + C  + G  D A +
Sbjct: 208 EVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWK 267

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F ++    L P   ++  M+  LCK      A  +F  ++    VP    YN +I G  
Sbjct: 268 FFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYG 327

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            A R   A  +L+ L + G  P+ +++ +I+ C  + RK    L +   MK+     +  
Sbjct: 328 SAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKP-NIS 386

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I      GR+ EA    ++M   G+  +++S N +++  CK  +LE A+ + +  
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY------------- 360
            ++G   +  T+  LIDGL K G I  A    E M   G D+N   Y             
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506

Query: 361 ----------------------NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
                                 N  +D + K G+++    +FE M+    + D  +YS +
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +H L KA +    S +  +  + G  +   A  AVVDGL  SG   +A ++  ++++  +
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 203/505 (40%), Gaps = 73/505 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +    +A + E+A  ++     +G    V  +  L+ A  +    +    +++ ++ 
Sbjct: 180 TVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKG 239

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + + PD+V YN  I    +   +  +     E+   G+ PD  SY S++  L + G+  E
Sbjct: 240 SCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGE 299

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV------- 183
           A  +F  M      PC   +N M+ G       D+A ++   L++ G +P +V       
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359

Query: 184 ---------------------------TYNILIKGLCKAGR------------------- 197
                                      TYNI+I  LC AGR                   
Sbjct: 360 CLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419

Query: 198 ----------------LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
                           L  A  I +   + G  PN++TY +++    +  K      +  
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G+  +   Y ++I  F   GR ++     ++M+  G + D+   NT ++   K G
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAG 539

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           ++E    + ++M+  GF  D  +++ILI GL KAG  +      + M++ GF  +  AYN
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +VD L K GK+D A  V E M+VK       TY S+V  L K  RL  A  L       
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659

Query: 418 GVRILKSAQKAVVDGLRHSGCRREA 442
           G+ +      +++DG    G   EA
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEA 684



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 119/221 (53%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R  N  V   CK+ +++KA  ++ +     V P V TY  ++D   +    D  Y +
Sbjct: 593 LDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYML 652

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +V+ Y+SLI G  +   +  +  +L+EM++ G+ P+V+++NSLM  L +
Sbjct: 653 FEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK 712

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + DEA   FQ M     +P T T++I++NGLC+ +  + A   ++ +QK G +P +VT
Sbjct: 713 TEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVT 772

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL K G +  A  + +    +G  P++ ++  +++
Sbjct: 773 YTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIE 813



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 148/367 (40%), Gaps = 70/367 (19%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI------------- 49
           G+    LLN  +    KA  +EK  AI  D    G LPDV +Y++LI             
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580

Query: 50  ----------------------DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
                                 D  C+    D  Y +L  M+   + P V TY S++ G 
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
            +   L  +  L +E    GI  +V  Y+SL+    ++G+ DEA  + ++M+   LTP  
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N +++ L K    D AL  F+ +++    P   TY+ILI GLC+  +   A    +E
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQE 760

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +   G  PN +TYTT+                                   I+   K+G 
Sbjct: 761 MQKQGLIPNVVTYTTM-----------------------------------ISGLAKVGN 785

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + +A    E+  T+G   D  S+N LI       +   AY + +E   +G   +  T   
Sbjct: 786 ITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCIS 845

Query: 328 LIDGLCK 334
           L+D L K
Sbjct: 846 LLDALNK 852



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 15/341 (4%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMGIPPDVWSYNSLMHCL-FQLGKPDEANR 133
           DVV Y   +  + +N  L+    LL        +PPD  +YN+++  L   L   ++   
Sbjct: 76  DVVVY---VLRSLKNPSLAAPFFLLASASSSQPLPPD--AYNAVLPFLSHDLAALEKVLE 130

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
               +  G   P  A    ++  L ++R  ++A R+   ++   F P    Y +LI  L 
Sbjct: 131 EMSHLGYGLPNPACAA---LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALA 187

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +A +   A  +L+++ D G+  +   +TT+++   R  + +  L ++  +K      D  
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIV 247

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y   I  F K G +  A  +  ++   G++ D VSY +++ + CK G+L  A  L  +M
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E +      Y +  +I G   A     A   LE + + G   ++ ++N I+  LGK  K+
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKV 367

Query: 374 DHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKL 410
           D A+ +F+ M+ KD+     TY+ ++  LC A R+  A K+
Sbjct: 368 DEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKI 407


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 229/478 (47%), Gaps = 36/478 (7%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R   + +  +C+  +++ A  ++ + +RLG+  ++   N LI+ YC+         ++ R
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + PD  +YN+L+ G  R    S + +L D+ML+ GI P V +YN+L+  L ++G 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A +++  M+   + P    ++ +L+GL K    + A  +++ +   GF    +T+N 
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G++  A  I  ++ D G +P+ ITY T++    +        ++  AM+R+ 
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            +     Y ++I+   K  RL E TD + +M   G+  +IV+Y  LI+ +CKEG L+ A+
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--------- 358
               EM + G   +    + ++ GL + G I  A L ++ M   GF  + E         
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692

Query: 359 -----------------------AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
                                   YN  +  L K GK+D A   F  + +K    D+FTY
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +++H    A  +  A +L    L+ G+        A+++GL  S     A+++  K+
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 226/512 (44%), Gaps = 72/512 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   + +AE +I   +   + PD  +YN L+D YC+       + + ++M +
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P V+TYN+L+ G  R      +L +   M++ G+ PD   Y++L+  LF++   + 
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEG 490

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +++D++    T    TFN M++GLCK      A  +F  ++  G  P+ +TY  LI 
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKA  +  A  +   +     +P+   Y +++   F++R+     ++L+ M  +G T 
Sbjct: 551 GYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610

Query: 251 DGF-------GYC----------------------------TVIAAFVKIGRLKEATDYM 275
           +         G+C                            T+++   ++GR+ EA   M
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670

Query: 276 EQMVTDG--------VQLDI------------------------VSYNTLINLYCKEGKL 303
           ++MV  G        ++ DI                        + YN  I   CK GK+
Sbjct: 671 QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A      +  +GF  D +T+  LI G   AGN+  A    + M + G   N+  YN +
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K   +D A  +F  +  K  F    TY++++   CK   + +A KL    ++ G+
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850

Query: 420 RILKSAQKAVVDGL-RHSGCRREAKKIQSKIR 450
                   A+++GL +H    R  K +   I+
Sbjct: 851 SPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 40/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +++I V  FCK  ++++A   +     LGV P++VTY+ LI+ Y      +A   +L  M
Sbjct: 228 MVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 69  REAGISPDVVTYN------------------------------------SLIAGATRNSL 92
            E G+S +VVTY                                      LI G  R   
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  ++ LLDEML +G+  +++  NSL++   + G+  EA  V   M+  +L P + ++N 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L+G C+  +T  A  +   + + G  P ++TYN L+KGLC+ G    A  I   +   G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            AP+ + Y+T++   F+   ++    +   +  +G+T     + T+I+   K+G++ EA 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M   G   D ++Y TLI+ YCK   +  A+ +   ME++        +  LI GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            K+  +      L  M   G   N+  Y  ++D   K+G +D A + +  M       + 
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              S+MV  L +  R+  A+ L+   +  G
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHG 677



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 187/427 (43%), Gaps = 41/427 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  ++ +AE I      LG  PD +TY  LID YC+  +    + +   M 
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              ISP +  YNSLI+G  ++  L    DLL EM   G+ P++ +Y +L+    + G  D
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL------- 182
           +A   + +M    L+      + M++GL +    D A  + + +  HGF P+        
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 183 -------------------------VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
                                    + YNI I GLCK G++  AR     L   G  P+ 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY T++              +   M R+G   +   Y  +I    K   +  A     +
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           +   G+  ++V+YNTLI+ YCK G ++AA+ L D+M ++G      T++ LI+GLCK G+
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIV---------DRLGKDGKIDHAINVFESMEVKDS 388
           I+ +   L  M K G DS L  Y  +V         + + K   +   +N F   + K S
Sbjct: 870 IERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNCFLLPKFKHS 929

Query: 389 FTYSSMV 395
           + +  +V
Sbjct: 930 WKFVGVV 936



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 192/408 (47%), Gaps = 13/408 (3%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K    E A  +  D +  G     +T+N +I   C+         I ++M++ G SPD +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY +LI G  + S +  +  +   M    I P +  YNSL+  LF+  +  E   +  +M
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM 603

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               LTP   T+  +++G CK    D A   +  + ++G    ++  + ++ GL + GR+
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF---DGFGY 255
             A  +++++ D G  P+   +   +K   R   Y    +I  ++     TF   +   Y
Sbjct: 664 DEANLLMQKMVDHGFFPD---HECFLKSDIR---YAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
              IA   K G++ +A  +   +   G   D  +Y TLI+ Y   G ++ A+ L DEM +
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T+  LI+GLCK+ N+  A+     +++ G   N+  YN ++D   K G +D 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           A  + + M  +       TYS++++ LCK   +  + KLL   +K+GV
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 206/484 (42%), Gaps = 40/484 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  N  +    K      A  +    IR+G++PDV   +++++A+C+    D     +
Sbjct: 190 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 249

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M   G+ P++VTY+SLI G      +  +  +L  M E G+  +V +Y  L+    + 
Sbjct: 250 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 126 GKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            K DEA +V + M     L P    + ++++G C+    D+A+R+   + + G    L  
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 185 YNILIKGLCKAGRLRTARWILKELGD-------------------SGHA----------- 214
            N LI G CK G +  A  ++  + D                    GH            
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 215 -----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
                P  +TY T++K   R   +   L+I   M + G   D  GY T++    K+   +
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A+   + ++  G     +++NT+I+  CK GK+  A  + D+M+  G   D  T+  LI
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CKA N+  A      M +     ++E YN ++  L K  ++    ++   M ++   
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLT 609

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +  TY +++   CK   L  A        ++G+         +V GL   G   EA  +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669

Query: 446 QSKI 449
             K+
Sbjct: 670 MQKM 673



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 197/414 (47%), Gaps = 14/414 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRM----REAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           N L+D  C+F   D G  I + +    RE   SP V  ++ ++       L   +L + D
Sbjct: 126 NQLVD-LCKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFD 180

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M + G  P + S NSL++ L + G+   A+ V+Q MI   + P     +IM+N  CK+ 
Sbjct: 181 NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG 240

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A    + ++  G  P +VTY+ LI G    G +  A+ +LK + + G + N +TYT
Sbjct: 241 KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT 300

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            ++K   +  K     ++L  M+ +     D   Y  +I  + + G++ +A   +++M+ 
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 360

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ ++   N+LIN YCK G++  A  ++  M     + D Y++  L+DG C+ G+   
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A    + M + G +  +  YN ++  L + G  D A+ ++  M       D   YS+++ 
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD 480

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            L K +    AS L    L  G    +     ++ GL   G   EA++I  K++
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 181/379 (47%), Gaps = 5/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P + + N L++   +       + +  +M   GI PDV   + ++    ++  +  +
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              + +M  +G+ P++ +Y+SL++    LG  + A  V + M    ++    T+ +++ G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305

Query: 157 LCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            CK    D A ++ RG+Q+    VP+   Y +LI G C+ G++  A  +L E+   G   
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 365

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N     +++    +  +      +++ M       D + Y T++  + + G   EA +  
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+ +G++  +++YNTL+   C+ G  + A  +   M K G   D+  ++ L+DGL K 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKM 485

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            N +GA    + +   GF  +   +N ++  L K GK+  A  +F+ M+      D  TY
Sbjct: 486 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 545

Query: 392 SSMVHNLCKAKRLPSASKL 410
            +++   CKA  +  A K+
Sbjct: 546 RTLIDGYCKASNVGQAFKV 564


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 229/478 (47%), Gaps = 36/478 (7%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R   + +  +C+  +++ A  ++ + +RLG+  ++   N LI+ YC+         ++ R
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + PD  +YN+L+ G  R    S + +L D+ML+ GI P V +YN+L+  L ++G 
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A +++  M+   + P    ++ +L+GL K    + A  +++ +   GF    +T+N 
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G++  A  I  ++ D G +P+ ITY T++    +        ++  AM+R+ 
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            +     Y ++I+   K  RL E TD + +M   G+  +IV+Y  LI+ +CKEG L+ A+
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--------- 358
               EM + G   +    + ++ GL + G I  A L ++ M   GF  + E         
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 658

Query: 359 -----------------------AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
                                   YN  +  L K GK+D A   F  + +K    D+FTY
Sbjct: 659 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 718

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +++H    A  +  A +L    L+ G+        A+++GL  S     A+++  K+
Sbjct: 719 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 776



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 222/481 (46%), Gaps = 36/481 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   + +AE +I   +   + PD  +YN L+D YC+       + + ++M +
Sbjct: 337 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P V+TYN+L+ G  R      +L +   M++ G+ PD   Y++L+  LF++   + 
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +++D++    T    TFN M++GLCK      A  +F  ++  G  P+ +TY  LI 
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 516

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKA  +  A  +   +     +P+   Y +++   F++R+     ++L+ M  +G T 
Sbjct: 517 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 576

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I  + K G L +A     +M  +G+  +I+  +T+++   + G+++ A LL+
Sbjct: 577 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 636

Query: 311 DEMEKQGF----EC----------------------------DKYTHTILIDGLCKAGNI 338
            +M   GF    EC                            +   + I I GLCK G +
Sbjct: 637 QKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 696

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSM 394
             AR     ++  GF  +   Y  ++      G +D A  + + M     V +  TY+++
Sbjct: 697 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 756

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           ++ LCK++ +  A +L     + G+         ++DG    G    A K++ K+    I
Sbjct: 757 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816

Query: 455 S 455
           S
Sbjct: 817 S 817



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 40/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +++I V  FCK  ++++A   +     LGV P++VTY+ LI+ Y      +A   +L  M
Sbjct: 194 MVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 253

Query: 69  REAGISPDVVTYN------------------------------------SLIAGATRNSL 92
            E G+S +VVTY                                      LI G  R   
Sbjct: 254 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 313

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  ++ LLDEML +G+  +++  NSL++   + G+  EA  V   M+  +L P + ++N 
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L+G C+  +T  A  +   + + G  P ++TYN L+KGLC+ G    A  I   +   G
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            AP+ + Y+T++   F+   ++    +   +  +G+T     + T+I+   K+G++ EA 
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M   G   D ++Y TLI+ YCK   +  A+ +   ME++        +  LI GL
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            K+  +      L  M   G   N+  Y  ++D   K+G +D A + +  M       + 
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              S+MV  L +  R+  A+ L+   +  G
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMVDHG 643



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 207/484 (42%), Gaps = 40/484 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S R  N  +    K      A  +    IR+G++PDV   +++++A+C+    D     +
Sbjct: 156 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 215

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M   G+ P++VTY+SLI G      +  +  +L  M E G+  +V +Y  L+    + 
Sbjct: 216 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 275

Query: 126 GKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            K DEA +V + M     L P    + ++++G C+    D+A+R+   + + G    L  
Sbjct: 276 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 335

Query: 185 YNILIKGLCKAGRLRTARWILKELGD-------------------SGHA----------- 214
            N LI G CK G +  A  ++  + D                    GH            
Sbjct: 336 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395

Query: 215 -----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
                P  +TY T++K   R   +   L+I   M ++G   D  GY T++    K+   +
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A+   + ++  G     +++NT+I+  CK GK+  A  + D+M+  G   D  T+  LI
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CKA N+  A      M +     ++E YN ++  L K  ++    ++   M ++   
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +  TY +++   CK   L  A        ++G+         +V GL   G   EA  +
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635

Query: 446 QSKI 449
             K+
Sbjct: 636 MQKM 639



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 198/414 (47%), Gaps = 14/414 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRM----REAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           N L+D  C+F   D G  I + +    RE   SP V  ++ ++       L   +L + D
Sbjct: 92  NQLVD-LCKFK--DRGNVIWDELVGVYREFAFSPTV--FDMILKVYVEKGLTKNALYVFD 146

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M + G  P + S NSL++ L + G+   A+ V+Q MI   + P     +IM+N  CK+ 
Sbjct: 147 NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG 206

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A    + ++  G  P +VTY+ LI G    G +  A+ +LK + + G + N +TYT
Sbjct: 207 KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT 266

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            ++K   +  K     ++L  M+ +     D   Y  +I  + + G++ +A   +++M+ 
Sbjct: 267 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 326

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ ++   N+LIN YCK G++  A  ++  M     + D Y++  L+DG C+ G+   
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A    + M + G +  +  YN ++  L + G  D A+ ++  M  +    D   YS+++ 
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            L K +    AS L    L  G    +     ++ GL   G   EA++I  K++
Sbjct: 447 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 182/379 (48%), Gaps = 5/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P + + N L++   +       + +  +M   GI PDV   + ++    ++  +  +
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              + +M  +G+ P++ +Y+SL++    LG  + A  V + M    ++    T+ +++ G
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271

Query: 157 LCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            CK    D A ++ RG+Q+    VP+   Y +LI G C+ G++  A  +L E+   G   
Sbjct: 272 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 331

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N     +++    +  +      +++ M       D + Y T++  + + G   EA +  
Sbjct: 332 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 391

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+ +G++  +++YNTL+   C+ G  + A  +   M K+G   D+  ++ L+DGL K 
Sbjct: 392 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKM 451

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            N +GA    + +   GF  +   +N ++  L K GK+  A  +F+ M+      D  TY
Sbjct: 452 ENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITY 511

Query: 392 SSMVHNLCKAKRLPSASKL 410
            +++   CKA  +  A K+
Sbjct: 512 RTLIDGYCKASNVGQAFKV 530



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 138/345 (40%), Gaps = 67/345 (19%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  ++ +AE I      LG  PD +TY  LID YC+  +    + +   M 
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM---------- 119
              ISP +  YNSLI+G  ++  L    DLL EM   G+ P++ +Y +L+          
Sbjct: 536 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595

Query: 120 -------------------------HCLFQLGKPDEANRVFQDMI--------------- 139
                                      L++LG+ DEAN + Q M+               
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 140 ----------------CGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
                           C   L P    +NI + GLCK    D+A R F  L   GFVP+ 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            TY  LI G   AG +  A  +  E+   G  PN +TY  ++    ++        +   
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 775

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
           + +KG   +   Y T+I  + KIG +  A    ++M+ +G+   I
Sbjct: 776 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 173/331 (52%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + N  +   CK   + +A  +  +    G+  DVVTY  LI  +C          
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +LN M    I+P+V TYN L+    +   +  + ++L  ML+  + PDV +Y++LM   F
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + +  +A  VF  M    +TP   ++ I++NG CKN+  D AL +F+ + +   VP +V
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI GLCK+GR+     ++ E+ D G   N ITY +++    +N      + + + M
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKM 435

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +G     F +  ++    K GRLK+A +  + ++T G  LD+  YN +IN +CK+G L
Sbjct: 436 KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLL 495

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           E A  +L +ME+ G   +  T  I+I+ L K
Sbjct: 496 EEALTMLSKMEENGCVPNAVTFDIIINALFK 526



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 205/419 (48%), Gaps = 6/419 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD++T N+LI+ +C       G+++L ++ + G  P  +T+ +LI G      ++ +
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
           L   D++L  GI  D  SY +L++ + ++G    A ++ +  I G LT P    +N +++
Sbjct: 149 LHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRK-IDGRLTKPNVEMYNTIID 207

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK +    A  +F  +   G   ++VTY  LI G C A +L+ A  +L E+      P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TY  ++    +  K K    +L+ M +     D   Y T++  +  +  LK+A    
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M   GV  D+ SY  LIN +CK   ++ A  L  EM ++       T++ LIDGLCK+
Sbjct: 328 NAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
           G I      ++ M   G  +N+  YN ++D L K+G +D AI +F  M+ +     SFT+
Sbjct: 388 GRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  LCK  RL  A +     L  G  +       +++G    G   EA  + SK+ 
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 182/376 (48%), Gaps = 39/376 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V  YN +IDA C++      Y + + M   GIS DVVTY +LI G    S L  ++ L
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM+   I P+V++YN L+  L + GK  EA  V   M+   + P   T++ +++G   
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +F  +   G  P++ +Y ILI G CK   +  A  + KE+      P  +T
Sbjct: 317 VYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y++++                             G C       K GR+    D +++M 
Sbjct: 377 YSSLID----------------------------GLC-------KSGRISYVWDLIDEMR 401

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+  ++++YN+LI+  CK G L+ A  L ++M+ QG     +T TIL+DGLCK G +K
Sbjct: 402 DRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLK 461

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A+   + +   G+  ++  YN +++   K G ++ A+ +   ME    V ++ T+  ++
Sbjct: 462 DAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIII 521

Query: 396 HNLCKAKRLPSASKLL 411
           + L K      A KLL
Sbjct: 522 NALFKKDENDKAEKLL 537



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 4/396 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   +  NRM     +P ++ +N ++    +    S ++ L   +   GI PD+ + N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C   +G+      V   ++     P T TF  ++ GLC     + AL     L   G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             + V+Y  LI G+CK G  R A  +++++      PN   Y TI+    + +       
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + S M  KG + D   Y T+I  F    +LKEA   + +MV   +  ++ +YN L++  C
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEGK++ A  +L  M K   + D  T++ L+DG      +K A+     M+ +G   ++ 
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSC 414
           +Y  +++   K+  +D A+N+F+ M  K+      TYSS++  LCK+ R+     L+   
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              G+        +++DGL  +G    A  + +K++
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 124/226 (54%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
            L+KA+ +      +GV PDV +Y +LI+ +C+    D    +   M +  + P +VTY+
Sbjct: 319 ELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
           SLI G  ++  +S   DL+DEM + GIP +V +YNSL+  L + G  D A  +F  M   
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            + PC+ TF I+L+GLCK     +A   F+ L   G+  ++  YN++I G CK G L  A
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
             +L ++ ++G  PNA+T+  I+   F+  +     ++L  M  +G
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ R+     +I +    G+  +V+TYN LID  C+    D    + N+M++ GI P 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T+  L+ G  +   L  + +   ++L  G   DV+ YN +++   + G  +EA  +  
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLS 503

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            M      P   TF+I++N L K    D A ++ R +
Sbjct: 504 KMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 196/414 (47%), Gaps = 38/414 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL----------- 65
           F KA RLE+ + +    +  G       Y +LI   C+  +FD  Y +L           
Sbjct: 20  FAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRK 79

Query: 66  --------------NRMREAG---------ISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
                         NR+ EA            PD +TY  ++    +   +  +L  ++E
Sbjct: 80  AIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEE 139

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   GI PD + YN ++  L Q  K +EA  +F+ M+   + P   T+N ++NGLCK   
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A  +F+ +   G+VP  V+YN LI G CK   L  A+ +  ++  S   PN +TYTT
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    ++ K +   E+L  M +KG T +   Y  +I  F K+ R+ EA   +EQMVT G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 341
           +   +V+YN L+N  C+  KLE A+ L   M ++       T+  L+  LC    + GA 
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--KDSFTYSS 393
           RL+ E + K G   +   Y+ +   L + GK+  A  + E M++  ++ F  SS
Sbjct: 380 RLYAEMIAK-GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRSS 432



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 192/420 (45%), Gaps = 5/420 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V+P   T+N + D + +    +    +   M EAG +     Y  LI+   +      + 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL  M          +Y+++++ L +L + +EA  + + M      P   T+  ++  L
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK +  D+AL     +   G  P+   YN ++ GLC+  ++  AR + +++      PN 
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY T++    +  + +   E+   M  KGY      Y T+I  F K   L  A D  ++
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV      ++V+Y TLI+   K GK++AA  +LD M K+G   +  T++ LIDG CK   
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
           +  A   LE M   G    +  YN +++ L +  K++ A  +F  M  +       TY++
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           ++  LC  K+L  A +L    +  G          +  GL  +G   EA+++  K+++ K
Sbjct: 365 LLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 135/270 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   C+  ++E+A  +    ++  + P+VVTYN LI+  C+    +  Y +   M
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G  P  V+YN+LI G  +   L  + D+ D+M+     P+V +Y +L+  L + GK 
Sbjct: 211 AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV 270

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  V   M+   +TP  AT++ +++G CK R  D A ++   +   G  P +VTYNIL
Sbjct: 271 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 330

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LC+A +L  A  + + +      P  +TY T+++    +++      + + M  KG 
Sbjct: 331 LNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 390

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
             D   Y T+     + G++ EA + ME+M
Sbjct: 391 PPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 137/251 (54%), Gaps = 7/251 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + +N  V T+       CKA R+E A  +  +    G +P  V+YN LID +C
Sbjct: 171 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 230

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +     A   + ++M  +   P+VVTY +LI G +++  +  + ++LD M++ G+ P+V 
Sbjct: 231 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 290

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y+ L+    ++ + DEA+++ + M+   + P   T+NI+LN LC+    ++A ++FRG+
Sbjct: 291 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 350

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            +    P +VTYN L++ LC   +L  A  +  E+   G  P+AITY T+     R  K 
Sbjct: 351 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 410

Query: 234 KLGLEILSAMK 244
               E++  MK
Sbjct: 411 HEAQELMEKMK 421



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 3/170 (1%)

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           ++NT+ + + K G+LE    +   M + G+      + ILI  LCK GN   A   L  M
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLP 405
               F     AY+ I++ L K  +++ A  + E M      D+ TY  +V  LCK KR+ 
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRID 131

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A   +      G++        V+ GL       EA+ +  K+   +I+
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 220/443 (49%), Gaps = 9/443 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CK    + A++     ++ G+LPD  +YN+LI       S +    + N M 
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLM--HCLFQLG 126
           + G+ PD+VTY  +  G     L+S + +++ +ML + G+ PD+ +Y  L+  HC  Q+G
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC--QMG 305

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             +EA R+ +D++          ++++L+ LCK    D AL++   ++ +   P+LVTY+
Sbjct: 306 NIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYS 365

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI GLCK G+++ A  + KE+  +   PN+  ++ I+K                ++   
Sbjct: 366 ILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMS 425

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D   Y  +I  +VK+G ++EA    +++    +   IV++N+LI  +CK  K+  A
Sbjct: 426 NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEA 485

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             LL+ ++  G E    T+T L++  C+ GNI      L  MN    +  +  Y  ++  
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKG 545

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K  K++ ++ + E M  K    D  TY++++   CKAK +  A +LL   L   +   
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPT 605

Query: 423 KSAQKAVVDGLRHSGCRREAKKI 445
            +    ++DGL   G   +A ++
Sbjct: 606 PATYNVLIDGLCRYGDVEDADRV 628



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 203/420 (48%), Gaps = 4/420 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+  L ++ + + CK  ++++A  ++ +     + PD+VTY++LI   C+         
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQ 382

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I P+   ++ ++ G     +LS +    D ++   + PDV  YN ++    
Sbjct: 383 LYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYV 442

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG  +EA R+++ +    +TP   TFN ++ G CKNR    A R+   ++ HG  P  V
Sbjct: 443 KLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAV 502

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+   C+ G +     +L E+      P  +TYT ++K   + RK +  +++L  M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           + KG   D   Y T+I  F K   +++A + ++ M+   ++    +YN LI+  C+ G +
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDV 622

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  +L  ++ +     K  +T +I   C  G+ + A      M + GF+ +++ Y+ +
Sbjct: 623 EDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++RL K   I+ A   F  M       D   +  M++   +A  + S  +LL   +K G+
Sbjct: 683 INRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 203/442 (45%), Gaps = 43/442 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+VTY +LI  +CQ  + +    +   +  +G   +V+ Y+ L++   +   +  +
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA---------NRVFQD---------- 137
           L LL EM    + PD+ +Y+ L+H L + GK  +A         NR+F +          
Sbjct: 346 LQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKG 405

Query: 138 ----------------MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
                           +I  +L P    +NIM++G  K    + A+R+++ L+     P 
Sbjct: 406 LCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPS 465

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEIL 240
           +VT+N LI G CK  ++  AR +L+ +   G  P+A+TYTT+M   C      KL  E+L
Sbjct: 466 IVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLH-ELL 524

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  K        Y  VI    K  +L+E+   +E M   G+  D ++YNT+I  +CK 
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
             +  A+ LLD+M     E    T+ +LIDGLC+ G+++ A   L  +     +    AY
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCL 415
             ++      G    A+ VF  M V+  F      YS++++ LCK   +  A       L
Sbjct: 645 TTMIKAHCVKGDAQRAVKVFHQM-VEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIML 703

Query: 416 KSGVRILKSAQKAVVDGLRHSG 437
             GV   +   + +++    +G
Sbjct: 704 SDGVSPDQEIFEMMLNAFHRAG 725



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 193/383 (50%), Gaps = 16/383 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + TYN L+         D  + + N ++++G      T + ++ G    S    ++  
Sbjct: 116 PSIQTYNSLL---YNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLF 172

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L +       P V S+N++M    +LG  D A   F  M+   + P T ++NI+++GL  
Sbjct: 173 LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 232

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAI 218
               + AL +   ++K G  P++VTY I+ KG    G +  AR I+ K L D G  P+ +
Sbjct: 233 AGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLV 292

Query: 219 TYTTIM--KCCFRNRKYKLGL--EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           TYT ++   C   N +  L L  ++LS+    G+  +   Y  ++++  K G++ EA   
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSS----GFQLNVILYSVLLSSLCKRGQVDEALQL 348

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M  + +Q D+V+Y+ LI+  CK+GK++ A  L  EM       + + H+ ++ GLC+
Sbjct: 349 LYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCE 408

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G +  AR++ + +       ++  YN ++D   K G ++ A+ +++ +  K       T
Sbjct: 409 KGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVT 468

Query: 391 YSSMVHNLCKAKRLPSASKLLLS 413
           ++S+++  CK +++  A +LL S
Sbjct: 469 FNSLIYGFCKNRKVVEARRLLES 491



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA-TFNIML 154
           +L +L +M E  + P + +YNSL   L+ L   D    V+ D I    TP +A T +I++
Sbjct: 102 ALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYND-IKDSGTPQSARTSSIIV 157

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLC      +A+   R      F P +V++N ++   CK G    A+     +   G  
Sbjct: 158 DGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  +Y  ++         +  LE+ + M+++G   D   Y  V   F  +G +  A + 
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           +++M+TD G++ D+V+Y  LI  +C+ G +E A  L  ++   GF+ +   +++L+  LC
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
           K G +  A   L  M       +L  Y+ ++  L K GK+  AI +++ M       +SF
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +S ++  LC+   L  A     S + S +R   +    ++DG    G   EA ++  ++
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 450 RMAKIS 455
           R   I+
Sbjct: 458 RDKAIT 463



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 4/245 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L+N     +C+   + K   ++++     + P VVTY ++I   C+    +    +L 
Sbjct: 505 TTLMN----AYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G++PD +TYN++I    +   +  + +LLD+ML   + P   +YN L+  L + G
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             ++A+RV   +   ++      +  M+   C       A+++F  + + GF   +  Y+
Sbjct: 621 DVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYS 680

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I  LCK   +  A++    +   G +P+   +  ++    R        E+L+ M + 
Sbjct: 681 AVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKF 740

Query: 247 GYTFD 251
           G   D
Sbjct: 741 GLLHD 745


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 216/466 (46%), Gaps = 39/466 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R ++A  I+ +    G  P+ V YN LID YC+  +      I + M   GISP+ V
Sbjct: 279 KLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSV 338

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T NSLI G  +++ +  +  LL+EML  G   +  ++ S++H L    + D A     +M
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +  +  P      ++++GLC+N     A+ ++  L + GF    VT N LI GLC+AG  
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTF--- 250
             A  +LKE+ + G   ++I+Y T++  C +  K + G ++   M R+G     YT+   
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518

Query: 251 ---------------------------DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                                      D + Y  +I  + K  R++E     ++MVT  +
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + + V Y TLI  YC+ G +  A+ L D+M  +G      T++ LI GL   G +  A  
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L+ M K G   N+  Y  ++    K G++    ++ + M +     +  TY+ M++  C
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K   + +A+KLL    + G+        A+ +G    G   EA K+
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKV 744



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 228/489 (46%), Gaps = 39/489 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  N  + +  KAN ++ +  +       GV PDV  ++ +++A+C     D    + 
Sbjct: 161 SLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELF 220

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M + G++P+VVTYN++I G  +N  L  +    ++M +  + P + +Y  L++ L +L
Sbjct: 221 RKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKL 280

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            + DEAN + ++M      P    +N +++G C+      AL++   +  +G  P  VT 
Sbjct: 281 ERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTC 340

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI-----MKCCF------------ 228
           N LI+G CK+ ++  A  +L+E+   G   N  T+T++     +KC F            
Sbjct: 341 NSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLL 400

Query: 229 ------------------RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
                             +N K    +E+   +  KG+  +      +I    + G  +E
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +++M+  G+ LD +SYNTLI   CKEGK+E  + L +EM ++G + D YT+ +L+ 
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----K 386
           GLC  G I+ A        K G   +   Y  ++D   K  +++    +F+ M      +
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           ++  Y +++   C+   +  A +L       G+    +   +++ GL + G    A ++ 
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640

Query: 447 SKIRMAKIS 455
            ++R   +S
Sbjct: 641 DEMRKEGLS 649



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 183/383 (47%), Gaps = 4/383 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R + A   I++ +     P+     +L+   CQ         +  R+ E G + +
Sbjct: 382 LCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAAN 441

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VT N+LI G         +  LL EMLE G+  D  SYN+L+    + GK +E  ++ +
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T+N++L+GLC     + A  ++   +K+G  P+  TY I+I G CKA 
Sbjct: 502 EMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKAN 561

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+     + +E+       NA+ Y T+++    N   +    +   M+ +G       Y 
Sbjct: 562 RVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYS 621

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I     IG +  A   +++M  +G+  ++V Y  LI  YCK G++     +L EM   
Sbjct: 622 SLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSIN 681

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +K T+TI+I+G CK GN+K A   L  M + G   +   YN + +   K+GK++ A
Sbjct: 682 NVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEA 741

Query: 377 INVFESMEVK----DSFTYSSMV 395
           + V + M       D  TY++++
Sbjct: 742 LKVCDLMSTGGISLDDITYTTLI 764



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 210/457 (45%), Gaps = 42/457 (9%)

Query: 42  VVTYNMLIDAYC-QF--VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           V   ++LI  Y  QF  + F   + + + +   G+ P + T N L++   + + +  S  
Sbjct: 124 VTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQ 183

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           + D M   G+ PDV+ ++++++     G+ D+A  +F+ M    + P   T+N +++GLC
Sbjct: 184 VFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLC 243

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           KN   D A +    ++K    P LVTY +LI GL K  R   A  ILKE+ D G+APN +
Sbjct: 244 KNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNV 303

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y T++    R       L+I   M   G + +     ++I  + K  +++ A   +E+M
Sbjct: 304 VYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM------------------------- 313
           +T G  ++  ++ ++I+  C + + ++A L + EM                         
Sbjct: 364 LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQ 423

Query: 314 ----------EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                      ++GF  +  T   LI GLC+AG+ + A   L+ M + G   +  +YN +
Sbjct: 424 SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    K+GK++    + E M  +    D +TY+ ++H LC   ++  A  L   C K+G 
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
                    ++DG   +    E +K+  ++   KI  
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 117/254 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   ++E+A  +  +  + G  PD  TY ++ID YC+    + G  +   M  
Sbjct: 516 NMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVT 575

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  + V Y +LI     N  +  +  L D+M   GIP    +Y+SL+H L  +G  D 
Sbjct: 576 MKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDS 635

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN++  +M    L+P    +  ++ G CK         + + +  +   P  +TY I+I 
Sbjct: 636 ANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMIN 695

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G ++ A  +L E+   G  P+A+TY  +     +  K +  L++   M   G + 
Sbjct: 696 GHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISL 755

Query: 251 DGFGYCTVIAAFVK 264
           D   Y T+I  + K
Sbjct: 756 DDITYTTLIDGWHK 769


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 217/436 (49%), Gaps = 5/436 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           ++KA  ++   I  G++PD  +Y  L++  C+  +      ++ +M E G   + VTYNS
Sbjct: 1   MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           L+ G   +  L+ SL LLD+++  G+ P+ ++Y+ L+   ++    +EA ++  ++I   
Sbjct: 61  LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   ++N++L GLCK   T+ A+R FR L   GF P +V+YNI+++ LC  GR   A 
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L E+     +P+ +TY  ++     + + +   E+L  M R  +      Y  +IA  
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHL 240

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K G+L      ++QM+      +  ++N  I + CK+G++  A+ ++  +  +      
Sbjct: 241 CKEGKLDLVIKCLDQMIHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQNLGNKQRSSTH 299

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             +  +I  LC+ GN   A   L  M K GF  +   Y+ ++  L  +G +D A+ +F  
Sbjct: 300 DFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRL 359

Query: 383 MEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           +E  D       +++++   CK+ R   +  +L   ++ G    ++    +V+G+ H   
Sbjct: 360 LEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEE 419

Query: 439 RREAKKIQSKIRMAKI 454
           +  A ++  ++ + ++
Sbjct: 420 KELAAEVLKELLLRQV 435



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 183/430 (42%), Gaps = 40/430 (9%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++  ++   +  G++P+  TY+ L++A  +    +    +L
Sbjct: 54  NTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLL 113

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++    ++   G  P+V SYN ++  L   
Sbjct: 114 DEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHE 173

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EAN++  +M   + +P   T+NI++  L  +   ++A  +   + +  F P   TY
Sbjct: 174 GRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTY 233

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LCK G+L      L ++      PN  T+  I   C                  
Sbjct: 234 NPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLC------------------ 275

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                             K GR+ EA   ++ +           Y  +I   C++G    
Sbjct: 276 ------------------KQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYP 317

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+ LL EM K GF  D YT++ LI GLC  G +  A      + +  +   L+ +N ++ 
Sbjct: 318 AFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALIL 377

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K G+ D ++++ E M  K    +  TY+ +V  +   +    A+++L   L   V  
Sbjct: 378 GFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQVMR 437

Query: 422 LKSAQKAVVD 431
             +A++ V+ 
Sbjct: 438 RNTAERLVLQ 447


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 211/439 (48%), Gaps = 8/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C+A  + +A  ++   +  G   ++ TY +LI   C+         +L+ M  
Sbjct: 253 TILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V TYN++I G  ++  +  +L +   M + G  PD W+YNSL++ L   GK DE
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDE 371

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +    I    TP   TF  ++NG CK    D+ALR+   +       +L  Y +LI 
Sbjct: 372 AEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K  RL+ A+  L E+  +G APN +TYT+I+    +       LE+   M+ +G   
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP 491

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y ++I   ++  +L +A   + +M  DG+   +++Y TLI   CK+ + + A+ L 
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 551

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + ME+ G   D+  + +L D LCK+G  + A     ++ + G       Y  +VD   K 
Sbjct: 552 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A  + E M  +    D +TYS ++  LCK K+L  A  +L     SGV+    A 
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++  +   G    AK +
Sbjct: 669 TIIISEMIKEGKHDHAKSL 687



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 204/460 (44%), Gaps = 43/460 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+  A  ++ +    GV+P V TYN +ID YC+         I   M + G +PD
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-------------------------- 110
             TYNSLI G     L     +LL+  +  G  P                          
Sbjct: 354 DWTYNSLIYGLCGGKLDEAE-ELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKS 412

Query: 111 ---------DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                    D+ +Y  L++ L +  +  EA     +M    L P   T+  +++G CK  
Sbjct: 413 NMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVG 472

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               AL +F+ ++  G  P   TY  LI GL +  +L  A  ++ ++ + G  P  ITYT
Sbjct: 473 MVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYT 532

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T+++   +  ++     +   M++ G T D   Y  +  A  K GR +EA  +   +V  
Sbjct: 533 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRK 589

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV L  V+Y +L++ + K G  + A +L+++M  +G + D YT+++L+  LCK   +  A
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEA 649

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
              L+ M   G   N+ AY  I+  + K+GK DHA ++F  M        + TY+  + +
Sbjct: 650 LSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            CK  R+  A  L+    + GV          ++G  H G
Sbjct: 710 YCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMG 749



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 176/367 (47%), Gaps = 3/367 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA R++ A  +  + I      D+  Y +LI+   +          LN M   G++P+
Sbjct: 398 YCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY S+I G  +  ++  +L++   M   G  P+ W+Y SL++ L Q  K  +A  +  
Sbjct: 458 VVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    +TP   T+  ++ G CK    DNA R+F  ++++G  P+   YN+L   LCK+G
Sbjct: 518 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A   L      G     +TYT+++    +         ++  M  +G   D + Y 
Sbjct: 578 RAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++ A  K  +L EA   ++QM   GV+ +IV+Y  +I+   KEGK + A  L +EM   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +    T+T+ I   CK G I+ A   +  M + G   ++  YN  ++  G  G ID A
Sbjct: 695 GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRA 754

Query: 377 INVFESM 383
            +  + M
Sbjct: 755 FSTLKRM 761



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 197/428 (46%), Gaps = 23/428 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL  +   + +    K  RL++A+  + +    G+ P+VVTY  +ID YC+     A   
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALE 479

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   G  P+  TY SLI G  ++  L  ++ L+ +M E GI P V +Y +L+    
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQC 539

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D A R+F+ M    LTP    +N++ + LCK+   + A   +  L + G V   V
Sbjct: 540 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKV 596

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ G  KAG    A  +++++ + G   +  TY+ +++   + +K    L IL  M
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +   Y  +I+  +K G+   A     +M++ G +    +Y   I+ YCK G++
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRI 716

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L+ EME+ G   D  T+ I I+G    G I  A   L+ M     + N   Y  +
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLL 776

Query: 364 VDRLGKDGKID-HAIN------------VFESMEV-------KDSFTYSSMVHNLCKAKR 403
           +    K   I+ H ++            V++ +E            TYSS++   CKA R
Sbjct: 777 LKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATR 836

Query: 404 LPSASKLL 411
           L  A  LL
Sbjct: 837 LEEACVLL 844



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 213/472 (45%), Gaps = 43/472 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS +  N+ + +  + +  E    +    ++ G+LPD VTYN +I AYC+  S    +  
Sbjct: 142 LSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNS-------------LLSC---------------- 95
              +RE+G+  D  T N+L+ G  R S             L+ C                
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCE 261

Query: 96  ------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 +L L+  M+  G   ++ +Y  L+  L + G+  +A  +  +M    + P   T
Sbjct: 262 ARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWT 321

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N M++G CK+    +AL +   ++++G  P+  TYN LI GLC  G+L  A  +L    
Sbjct: 322 YNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAI 380

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G  P  IT+T ++    +  +    L + S M       D   Y  +I   +K  RLK
Sbjct: 381 ARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLK 440

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + + +M  +G+  ++V+Y ++I+ YCK G + AA  +   ME +G   + +T+  LI
Sbjct: 441 EAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
            GL +   +  A   +  M + G    +  Y  ++    K  + D+A  +FE ME     
Sbjct: 501 YGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 560

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            D   Y+ +   LCK+ R   A   L   ++ GV + K    ++VDG   +G
Sbjct: 561 PDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAG 609



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 197/430 (45%), Gaps = 26/430 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+     CK+ R E+A + ++   R GV+   VTY  L+D + +  + D    ++ +M  
Sbjct: 567 NVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 623

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D+ TY+ L+    +   L+ +L +LD+M   G+  ++ +Y  ++  + + GK D 
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +MI     P   T+ + ++  CK    + A  +   +++ G  P++VTYNI I 
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G +  A   LK + D+   PN  TY  ++       K+ L + +++A     +  
Sbjct: 744 GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL-------KHFLKMSLINA-----HYV 791

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D  G    I        L      +E+M+  G+   +V+Y+++I  +CK  +LE A +LL
Sbjct: 792 DTSGMWNWI-------ELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M  +    ++  +T+LI   C       A   +  M + GF   LE+Y+ ++  L  +
Sbjct: 845 DHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904

Query: 371 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A ++F  +   D       +  +   L KA  +   S+LL +      RI   + 
Sbjct: 905 GDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESY 964

Query: 427 KAVVDGLRHS 436
             + D +R +
Sbjct: 965 SMLTDSIREA 974



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 16/268 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S     + + ++CK  R+E+AE +I +  R GV PDVVTYN+ I+        D  ++
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSL----------------LSCSLDLLDEMLEMG 107
            L RM +A   P+  TY  L+    + SL                L+    LL+ M++ G
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P V +Y+S++    +  + +EA  +   M+  D++P    + +++   C  +    A+
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAV 876

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
                + + GF P+L +Y+ LI GLC  G    A+ +  +L    +  N + +  +    
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            +        ++L+AM  +    D   Y
Sbjct: 937 LKAGHVDFCSQLLAAMDNRHCRIDSESY 964


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 217/474 (45%), Gaps = 71/474 (14%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C  N ++ A A++ D  R G +P+ + Y  LI A  +    +    +L  M   G  P
Sbjct: 244 ALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIP 303

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA---- 131
           DV T+N  I G  +   +  +  L+D ML  G  P+ ++Y  LMH L ++GK DEA    
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 132 NRV-------FQDMICGDLT---------------------PCTATFNIMLNGLCKNRYT 163
           N+V       F  +I G ++                     P   T+N ++ GLCK  Y 
Sbjct: 364 NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 423

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
            +A  +   +Q  G  P ++TY ILI   CK GRL  AR +L E+   G A NA+ Y  +
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 483

Query: 224 MKCCFRNRKYKLGLEILSAMKRKG-----YTFDG--FGYC-------------------- 256
           +    ++ K +  L +   M  KG     +TF+   FG C                    
Sbjct: 484 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543

Query: 257 --------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                   T+I AF++ G ++EA   +  M+  G  LD ++YN LI   C+ G +E    
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 603

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L ++M  +G   +  +  ILI+GLC+ GNI+ A   L  M   G   ++  YN +++ L 
Sbjct: 604 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 663

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           K G+   A+N+F+ ++V+    D+ TY++++   CK      A  LL   + SG
Sbjct: 664 KTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 196/415 (47%), Gaps = 52/415 (12%)

Query: 40  PDVVTYNMLIDAY----CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           P   +YN+++D      C  V  +  Y +L++    GISP V T+  ++      + +  
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK----GISPTVYTFGVVMKALCLVNEVDS 253

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  LL +M   G  P+   Y +L+H L ++G+ +E  ++ ++M+     P   TFN  ++
Sbjct: 254 ACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 313

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK      A ++   +   GF P   TY +L+ GLC+ G++  AR +L ++ +    P
Sbjct: 314 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----P 369

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + + T+                                   I  +V  GRL EA   M
Sbjct: 370 NVVLFNTL-----------------------------------INGYVSRGRLDEAKAVM 394

Query: 276 -EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E M++ G   DI +YNTLI   CK+G L +A  L++EM+ +G E +  T+TILID  CK
Sbjct: 395 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 454

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G ++ AR  L+ M+  G   N   YNC++  L KD K+  A+N+F  M  K    D FT
Sbjct: 455 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 514

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++S++  LCK  +   A  L    L  GV         ++      G  +EA K+
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 569



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 169/327 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L  A  ++ +    G  P+V+TY +LID +C+    +    +L+ M  
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ + V YN LI+   ++  +  +L++  +M   G  PD++++NSL+  L ++ K +E
Sbjct: 471 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 530

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++QDM+   +   T T+N +++   +      AL++   +   G   + +TYN LIK
Sbjct: 531 ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 590

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+AG +     + +++   G  PN I+   ++    R    +  LE L  M  +G T 
Sbjct: 591 ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTP 650

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I    K GR +EA +  +++  +G+  D ++YNTLI+ +CKEG  + A+LLL
Sbjct: 651 DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 710

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGN 337
                 GF  ++ T  IL+    K G+
Sbjct: 711 SRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 1/364 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDG-IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L N  +  +    RL++A+A++ +  + +G  PD+ TYN LI   C+     +   ++N 
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G  P+V+TY  LI    +   L  + ++LDEM   G+  +   YN L+  L +  K
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A  +F DM      P   TFN ++ GLCK    + AL +++ +   G +   +TYN 
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI    + G ++ A  ++ ++   G   + ITY  ++K   R    + GL +   M  KG
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +      +I    + G ++ A +++  M+  G+  DIV+YN+LIN  CK G+ + A 
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L D+++ +G   D  T+  LI   CK G    A L L      GF  N   +  +V   
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 732

Query: 368 GKDG 371
            K+G
Sbjct: 733 IKEG 736



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 200/446 (44%), Gaps = 71/446 (15%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P V T+ +++ A C     D+   +L  M   G  P+ + Y +LI   ++   ++  
Sbjct: 230 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEV 289

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L LL+EML MG  PDV ++N  +H L ++ +  EA ++   M+    TP + T+ ++++G
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 349

Query: 157 LCKNRYTDNALRMFRGLQK----------HGFV----------------------PELVT 184
           LC+    D A  +   +            +G+V                      P++ T
Sbjct: 350 LCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 409

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI GLCK G L +AR ++ E+   G  PN ITYT ++    +  + +    +L  M 
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469

Query: 245 RKGYTFDGFGYCTVIAA-----------------------------------FVKIGRLK 269
            KG   +  GY  +I+A                                     K+ + +
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA    + M+ +GV  + ++YNTLI+ + + G ++ A  L+++M  +G   D  T+  LI
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 385
             LC+AGNI+      E M   G + N  + N +++ L + G I HA+     M      
Sbjct: 590 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLL 411
            D  TY+S+++ LCK  R   A  L 
Sbjct: 650 PDIVTYNSLINGLCKTGRAQEALNLF 675



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 9/225 (4%)

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---QLDIV 288
           ++K    +L  MK++G  F    +  ++  + + G   +AT  +  M   GV   +    
Sbjct: 144 EFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFR 201

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           SYN ++++       +    +  EM  +G     YT  +++  LC    +  A   L+ M
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
            + G   N   Y  ++  L K G+++  + + E M     + D  T++  +H LCK  R+
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             A+KL+   L  G          ++ GL   G   EA+ + +K+
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 3/250 (1%)

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYT 221
           T +AL M   +++ G V     + +++K   +AG    A R +L   G     P   +Y 
Sbjct: 147 TTDALLM--QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYN 204

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++         K+   +   M  KG +   + +  V+ A   +  +  A   ++ M   
Sbjct: 205 VVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRH 264

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G   + + Y TLI+   K G++     LL+EM   G   D  T    I GLCK   I  A
Sbjct: 265 GCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEA 324

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
              ++ M   GF  N   Y  ++  L + GK+D A  +   +   +   ++++++     
Sbjct: 325 AKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSR 384

Query: 402 KRLPSASKLL 411
            RL  A  ++
Sbjct: 385 GRLDEAKAVM 394


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 215/446 (48%), Gaps = 25/446 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            CKA  L+KA+ ++      GV  +V+TY+++ID  C+    D    I   M    G  P
Sbjct: 83  LCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVP 142

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVT+NSL+ G      +S +  L + M + G  P+V SY++L+  L + G+ DEA R++
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY---------- 185
           ++M+     P    +   + GLCK      A    R +   G   + V +          
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262

Query: 186 -------NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                  N +I+ LC++G L  A    +E+    H P+A  + T++    ++++   G+ 
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322

Query: 239 ILSAMK--RKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           +   MK  ++ Y       Y  ++    K  +L EA + + +M   G+  D+V+Y+ L++
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CK GKL+ A  LL+EM K+G   D +T   +++ L KAG +  A  HLE M   G   
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +L  YN ++D L K G+ID AI     M       D F+Y+ ++  LC++ +   A  + 
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSG 437
              +K GV        +++DGL  +G
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNG 528



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 188/419 (44%), Gaps = 27/419 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA RL++A  +  + +    +PD+V Y   +   C+            +M   G   D
Sbjct: 189 LCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 77  VVTY-----------------NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
            V +                 N +I    R+ +L  +    +EM+    PP    +N+L+
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 120 HCLFQLGKPDEANRVFQDMICGD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           H + +  +  +   +FQ M         P   T+NIM++ LCK +  D A  +   +  +
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P++VTY+ L+ GLCK G+L  A  +L+E+   G  P++ T  +I+    +  K    
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L  L  MK +G T D   Y T++    K GR+ EA  ++ +MV      D+ SY  +I  
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITA 488

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            C+ G+   A+ +  EM K+G   D   +  L+DGL + G      L LE +       +
Sbjct: 489 LCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL---EDLALELLKTSLCKPD 545

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +  ++D L K GK + A  V E M       D+FTY S+V  L K  ++  A +L+
Sbjct: 546 FVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLV 604



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 203/446 (45%), Gaps = 25/446 (5%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G + G    V TYN  +DA  +  +    Y    +M+  G  PD  TY+ ++ G  +   
Sbjct: 29  GRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGE 88

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFN 151
           L  + +LL ++ E G+  +V +Y+ ++    +  + D+A  +F+ M   G   P   TFN
Sbjct: 89  LDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFN 148

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +L GLC       A  +F  + K G  P +++Y+ L+ GLCKAGRL  A  + +E+ + 
Sbjct: 149 SLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK 208

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
              P+ + YT+ +    +  +     +    M  KG   D   + TVI    K G  +EA
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA 268

Query: 272 TDYM-----------------EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            + M                 E+M++         +NTLI+  CK  +L    LL   M+
Sbjct: 269 QNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328

Query: 315 K-QGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
             + F C     T+ I++D LCKA  +  A+  +  M   G   ++  Y+ +VD L K G
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K+D A ++ E M       DSFT +S+++ L KA ++  A   L +    G         
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYN 448

Query: 428 AVVDGLRHSGCRREAKKIQSKIRMAK 453
            ++DGL  +G   EA    +K+  AK
Sbjct: 449 TLLDGLCKAGRIDEAITFLAKMVAAK 474



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 20/317 (6%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGI----RLGVL------PDVVTYNMLIDAYCQF 55
           S  L N  +   CK+ RL        DG+    R+  +      P++ TYN+++D  C+ 
Sbjct: 300 SAELFNTLIHAVCKSKRLP-------DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA 352

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
              D    ++N M   G+SPDVVTY++L+ G  +   L  + DLL+EM + G+ PD ++ 
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            S+++ L + GK D A    + M     TP   T+N +L+GLCK    D A+     +  
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
               P++ +Y I+I  LC++G+   A  I +E+   G  P+ + Y +++    RN    L
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            LE+L     K    D   +  V+    K G+ ++A + +E+M   G   D  +Y ++++
Sbjct: 533 ALELLKTSLCKP---DFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVS 589

Query: 296 LYCKEGKLEAAYLLLDE 312
              K GK++ A  L+D+
Sbjct: 590 GLRKLGKVDKARQLVDD 606



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 3/175 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD+VTYN L+D  C+    D   T L +M  A  +PDV +Y  +I    R+   + +
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +  EM++ G+ PD   Y+SL+  L + G  D A  + +  +C    P      ++L+G
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLC---KPDFVMHKMVLDG 555

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           LCK    ++A  +   +   GF  +  TY  ++ GL K G++  AR ++ +  ++
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASET 610



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 17/198 (8%)

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  F  +GR K            G Q  + +YN  ++   K    + AY    +M+++
Sbjct: 20  TIVRLFDWLGRQK------------GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G+  D +T++I++ GLCKAG +  A+  L  + + G   N+  Y+ ++D   K  ++D A
Sbjct: 68  GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127

Query: 377 INVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           + +F++M      V D  T++S++  LC  +R+  A  L     K+G      +   ++D
Sbjct: 128 LEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187

Query: 432 GLRHSGCRREAKKIQSKI 449
           GL  +G   EA ++  ++
Sbjct: 188 GLCKAGRLDEACRLWEEM 205


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 168/319 (52%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +FCK   +  A  +  + I   + P+VVT+N LI  +C          +LN M    ++P
Sbjct: 203 SFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNP 262

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V T+N LI G  +   +  +  +L  M++ G+ P+V +Y SLM   F + + ++A  VF
Sbjct: 263 NVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVF 322

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +    +TP   ++++M+NGLCKN+  D A+++F+ +      P  VTY+ LI GLCK+
Sbjct: 323 NTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKS 382

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+     ++ E+ + G   N ITY +++    +N +    + +L+ MK +G   D   Y
Sbjct: 383 GRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTY 442

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T++    K GRLK+A    + ++  G  L+I  Y  +IN  CKEG  + A  LL +ME 
Sbjct: 443 TTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMED 502

Query: 316 QGFECDKYTHTILIDGLCK 334
            G   D  T+  LI  L K
Sbjct: 503 NGCMPDAVTYETLISALFK 521



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 196/377 (51%), Gaps = 7/377 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDL 99
           D V+Y  LI+  C+     A   +L ++     + PDV+ Y ++I    ++ L+  + DL
Sbjct: 157 DQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL 216

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM+   I P+V ++NSL++    +G+  EA  +  +M   ++ P   TFNI+++GLCK
Sbjct: 217 YSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCK 276

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +   + K G  P +VTY  L+ G      +  A+ +   +   G  PN  +
Sbjct: 277 EGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHS 336

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    +N+     +++   M  K  T +   Y ++I    K GR+ +  D ++++ 
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN 396

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   +I++YN+L+N  CK  +++ A  LL +M+ +G + D  T+T L+DGLCK G +K
Sbjct: 397 NRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLK 456

Query: 340 GA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
            A R++ + + K G+  N+  Y  +++ L K+G  D A+++   ME    + D+ TY ++
Sbjct: 457 DAQRIYQDLLCK-GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETL 515

Query: 395 VHNLCKAKRLPSASKLL 411
           +  L K  +   A KLL
Sbjct: 516 ISALFKNNKNGKAVKLL 532



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 201/451 (44%), Gaps = 40/451 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +  +N ++ +  +   F    +   +M   GI P++ T+N LI   +    L+ +  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + ++L++G  PD  + N+L+  L   GK  EA      +I         ++  ++NGLCK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 160 NRYTDNALRMFRGLQKHGFV------------------------------------PELV 183
           +  T  AL++ R ++    V                                    P +V
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N LI G C  G+L+ A  +L E+  +   PN  T+  ++    +  + K    +LS M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            ++G   +   Y +++  +  +  + +A      +   GV  ++ SY+ +IN  CK   +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L  EM  +    +  T++ LIDGLCK+G I      ++ +N  G  +N+  YN +
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K+ ++D AI +   M+      D  TY+++V  LCK  RL  A ++    L  G 
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +       +++GL   G   EA  + S++ 
Sbjct: 471 PLNIRMYTVMINGLCKEGFFDEALSLLSQME 501



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 41/350 (11%)

Query: 129 DEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
           D+A   F  ++   + TP    FN +L+ L K  +   A+   + ++  G  PE+ T+NI
Sbjct: 34  DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI       +L  A  ++ ++   G+ P+ +T  T+++    N K K  L     + RK 
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 248 YTFDGFGYCTVIAAFVKIGRLK------------------------------------EA 271
           +  D   Y T+I    K G  +                                    +A
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D   +M+   +  ++V++N+LI  +C  G+L+ A  LL+EM       + YT  ILIDG
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
           LCK G +K A   L  M K G + N+  Y  ++D      +++ A +VF ++ ++    +
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             +YS M++ LCK K +  A KL        +        +++DGL  SG
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSG 383



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 108/198 (54%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK   +++A  +  +     + P+ VTY+ LID  C+       + +++ +  
Sbjct: 338 SVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINN 397

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   +++TYNSL+ G  +N  +  ++ LL +M + GI PD+ +Y +L+  L + G+  +
Sbjct: 398 RGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKD 457

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R++QD++C         + +M+NGLCK  + D AL +   ++ +G +P+ VTY  LI 
Sbjct: 458 AQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLIS 517

Query: 191 GLCKAGRLRTARWILKEL 208
            L K  +   A  +L+E+
Sbjct: 518 ALFKNNKNGKAVKLLREM 535



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 11/245 (4%)

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           + H P    +  I+    +   +K+ +     M+ KG   + F +  +I  F  + +L  
Sbjct: 47  NNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNF 106

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + +++  G Q D V+ NTL+   C  GK++ A    D + ++ F  D+ ++  LI+
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166

Query: 331 GLCKAGNIKGARLHLEYMNKIG----FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           GLCK+G  + A   L+ + KI        ++  Y  I+D   KD  +  A +++  M VK
Sbjct: 167 GLCKSGETRAA---LQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK 223

Query: 387 DSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             +    T++S+++  C   +L  A  LL     + V         ++DGL   G  ++A
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283

Query: 443 KKIQS 447
             + S
Sbjct: 284 TSVLS 288


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 192/399 (48%), Gaps = 4/399 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++   L I V   C+   +EK++ +I +    G+ P+  TYN +I+AY +   F     
Sbjct: 221 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEG 280

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M++ G+  + VTY  L+  + +N  +S +  L DEM E GI  DV  Y SL+    
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G    A  +F ++    L+P + T+  +++G+CK      A  +   +Q  G     V
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            +N LI G C+ G +  A  I   +   G   +  T  TI  C  R ++Y    + L  M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G       Y  +I  + K G ++EA     +M + GVQ + ++YN +I  YCK+GK+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L   ME  G + D YT+T LI G C A N+  A      M   G D N   Y  +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +  L K GK D A  +++ M+ K    D+  Y++++ ++
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 181/404 (44%), Gaps = 5/404 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV   V +  ++++  C+    +    ++      GI P+  TYN++I    +    S  
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +L  M + G+  +  +Y  LM    + GK  +A ++F +M    +      +  +++ 
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+      A  +F  L + G  P   TY  LI G+CK G +  A  ++ E+   G    
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + + T++    R         I   M++KG+  D F   T+ + F ++ R  EA  ++ 
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  GV+L  VSY  LI++YCKEG +E A  L  EM  +G + +  T+ ++I   CK G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            IK AR     M   G D +   Y  ++        +D A+ +F  M +K    +S TY+
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
            M+  L KA +   A  L     + G  I      A++ G  HS
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI-GSMHS 621



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 6/325 (1%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  +E  RVF  M+   L+    +  + L    K R  D  L +FR +   G    + + 
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE-ILSAMK 244
            I+++GLC+ G +  ++ ++KE    G  P A TY TI+    + R +  G+E +L  MK
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVLKVMK 286

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           + G  ++   Y  ++   VK G++ +A    ++M   G++ D+  Y +LI+  C++G ++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+LL DE+ ++G     YT+  LIDG+CK G +  A + +  M   G +     +N ++
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D   + G +D A  +++ ME K    D FT +++     + KR   A + L   ++ GV+
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
           +   +   ++D     G   EAK++
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRL 491



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 187/424 (44%), Gaps = 39/424 (9%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F+ G  + + M + G+S D  +    +  A +   +   L++   M++ G+   V+S   
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           ++  L + G+ +++ ++ ++     + P   T+N ++N   K R       + + ++K G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            V   VTY +L++   K G++  A  +  E+ + G   +   YT+++    R    K   
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            +   +  KG +   + Y  +I    K+G +  A   M +M + GV +  V +NTLI+ Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYT--------------------------------- 324
           C++G ++ A ++ D ME++GF+ D +T                                 
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469

Query: 325 --HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             +T LID  CK GN++ A+     M+  G   N   YN ++    K GKI  A  +  +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ME      DS+TY+S++H  C A  +  A +L       G+         ++ GL  +G 
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589

Query: 439 RREA 442
             EA
Sbjct: 590 SDEA 593


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 200/407 (49%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+  A +++ D +R G  P+VVTY +L++A C+   F+    +L+ MR  G +P+
Sbjct: 152 LCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPN 211

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN +I G  R   +  + DLL+ +   G  PD  SY +L+  L    + D+   +F 
Sbjct: 212 IVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFA 271

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TF++++   C+    + A+++ + + +H         NI+I  +CK G
Sbjct: 272 EMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQG 331

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A   L  +G  G  P+ I+YTT++K   R  ++    E+L  M R     +   + 
Sbjct: 332 RVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFN 391

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T I    + G +++A   +EQM   G  + +V+YN L+N +C +G +++A  L   M  +
Sbjct: 392 TFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 451

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T+T L+ GLC A  +  A   +  M       N+  +N +V+   + G +D A
Sbjct: 452 P---NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEA 508

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I + E M       +  TY+++   + K      A +LL   +  GV
Sbjct: 509 IELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGV 555



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 192/396 (48%), Gaps = 4/396 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R   A  ++      G   DV  YN L+  YC++   DA   ++  M    ++PD
Sbjct: 85  LCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPD 141

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  LI        ++ +L LLD+ML  G  P+V +Y  L+  + +    ++A  V  
Sbjct: 142 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLD 201

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M     TP   T+N+++NG+C+    D+A  +   L  +G  P+ V+Y  L+KGLC + 
Sbjct: 202 EMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASK 261

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R      +  E+ +    PN +T+  +++   R    +  +++L  M       +     
Sbjct: 262 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCN 321

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI +  K GR+ +A  ++  M + G   D +SY T++   C+  +   A  LL EM + 
Sbjct: 322 IVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRN 381

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               ++ T    I  LC+ G I+ A + +E M + G    +  YN +V+     G ID A
Sbjct: 382 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSA 441

Query: 377 INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
           + +F SM  K ++ TY++++  LC A+RL +A++L+
Sbjct: 442 LELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELV 477



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 182/407 (44%), Gaps = 7/407 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C + R +  E +  + +    +P+ VT++MLI  +C+    +    +L +M E   + +
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATN 316

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N +I    +   +  +   L+ M   G  PD  SY +++  L +  + ++A  + +
Sbjct: 317 TTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLK 376

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TFN  +  LC+    + A+ +   +Q+HG    +VTYN L+ G C  G
Sbjct: 377 EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQG 436

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            + +A  + + +      PN ITYTT++       +     E+++ M  +    +   + 
Sbjct: 437 HIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFN 493

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  F + G L EA + +EQM+  G   ++++YNTL +   K+   E A  LL  +  +
Sbjct: 494 VLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK 553

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T + +I  L K   ++ A         IG       YN I+  L K  +ID+A
Sbjct: 554 GVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNA 613

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           I+    M     + +  TY  ++  L +   L  A  LL      GV
Sbjct: 614 IDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 162/337 (48%), Gaps = 3/337 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI + + CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M      P+ VT+N+ I    +  L+  ++ L+++M E G    V +YN+L++     
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  D A  +F+ M C    P T T+  +L GLC     D A  +   +      P +VT+
Sbjct: 436 GHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTF 492

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G L  A  +++++ + G  PN ITY T+     ++   +  LE+L  +  
Sbjct: 493 NVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS 552

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG + D   + ++I    K  R++EA          G++   + YN ++   CK  +++ 
Sbjct: 553 KGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDN 612

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A   L  M   G   ++ T+ ILI+GL + G +K A+
Sbjct: 613 AIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQ 649



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 3/274 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C  C+   +E+A  +I      G    VVTYN L++ +C     D+    L   R
Sbjct: 390 FNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSA---LELFR 446

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+ +TY +L+ G      L  + +L+ EML    PP+V ++N L++   Q G  D
Sbjct: 447 SMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLD 506

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + + M+    TP   T+N + +G+ K+  +++AL +  GL   G  P+++T++ +I
Sbjct: 507 EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L K  R+  A  +     D G  P A+ Y  I+    +  +    ++ L+ M   G  
Sbjct: 567 GILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCM 626

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y  +I    + G LKEA D +  + + GV
Sbjct: 627 PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 36/295 (12%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR---------- 202
           ++  LC+   T +A R+ R  +  G   ++  YN L+ G C+ G L  AR          
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAP 140

Query: 203 ------WILKELGDSGHA----------------PNAITYTTIMKCCFRNRKYKLGLEIL 240
                  +++ L D G                  PN +TYT +++   +N  ++  + +L
Sbjct: 141 DAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVL 200

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ KG T +   Y  +I    + GR+ +A D + ++ + G Q D VSY TL+   C  
Sbjct: 201 DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS 260

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            + +    L  EM ++    ++ T  +LI   C+ G ++ A   L+ M +    +N    
Sbjct: 261 KRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLC 320

Query: 361 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           N +++ + K G++D A     +M       D+ +Y++++  LC+A+R   A +LL
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 8/176 (4%)

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           LSA  R G   D +    +I    + GR  +A   +      G  +D+ +YNTL+  YC+
Sbjct: 64  LSA-SRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR 122

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G L+AA  L+  M       D YT+T LI  LC  G +  A   L+ M + G   N+  
Sbjct: 123 YGHLDAARRLIGSMPVAP---DAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVT 179

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           Y  +++ + K+   + A+ V + M  K    +  TY+ +++ +C+  R+  A  LL
Sbjct: 180 YTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL 235



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 17/160 (10%)

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
           L  +E    AA L+     + G   D Y  T LI  LC+ G    A   L      G   
Sbjct: 49  LIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 108

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           ++ AYN +V    + G +D A  +  SM V  D++TY+ ++  LC   R+  A  LL   
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 168

Query: 415 LKSGVR--------ILKSAQK--------AVVDGLRHSGC 438
           L+ G +        +L++  K        AV+D +R  GC
Sbjct: 169 LRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGC 208


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 206/409 (50%), Gaps = 4/409 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +C+ N ++ A ++  + +R GVLPDVVT + L+   C+   F   Y +   M + G 
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGA 310

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P+ VTY  LI    +    + SL LL E++  G+  D+  Y +LM  L + GK DEA  
Sbjct: 311 APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKD 370

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F+  +  + TP   T+ ++++ LCK    D A ++   +++    P +VT++ +I GL 
Sbjct: 371 MFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLV 430

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G +  A   ++E+ + G  PN +TY T++   F+    +  L++   M  +G   + F
Sbjct: 431 KRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKF 490

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
              +++    K G++++A     +M   GV LD V+Y TLI+   K G L AA+ +  E+
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++    D   + + I+ LC  G  K A   LE M   G   +   YN ++    ++GK 
Sbjct: 551 TEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKT 610

Query: 374 DHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             A+ +   M+   +K +  TYS+++  L +A  +  A  LL     SG
Sbjct: 611 AKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 213/449 (47%), Gaps = 4/449 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C+A  ++ A  ++    R GV P+VVTY M I  YC+  + D  +++   M  
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVT ++L+ G  ++   S +  L  EM ++G  P+  +Y  L+  L +  + +E
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE 332

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +  +  +++   +      +  +++ LCK    D A  MFR        P  VTY +LI 
Sbjct: 333 SLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLID 392

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCKAG +  A  +L E+ +   +PN +T+++I+    +        + +  MK +G   
Sbjct: 393 ALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y TVI    K    + A D   +M+ +GV+++    ++L+N   K GK+E A  L 
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   D   +T LIDGL K GN+  A    + + +     +   YN  ++ L   
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK   A +  E M+      D  TY++M+    +  +   A KLL    +S ++      
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             ++ GL  +G   +AK + +++  +  S
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFS 661



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 211/439 (48%), Gaps = 6/439 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++++A+ +    +     P+ VTY +LIDA C+  + D    +L+ M E  ISP+
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT++S+I G  +   +  + D + EM E GI P+V +Y +++   F+    + A  V+ 
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+C  +       + ++NGL KN   + A  +FR + + G + + V Y  LI GL K G
Sbjct: 479 EMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTG 538

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  + +EL +    P+A+ Y   + C     K K     L  M+  G   D   Y 
Sbjct: 539 NLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYN 598

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+IAA  + G+  +A   +  M    ++ ++++Y+TLI    + G +E A  LL+EM   
Sbjct: 599 TMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS 658

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHL-EYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           GF     TH  ++   C  G      L + E+M   G  +++  YN +V  L  +G    
Sbjct: 659 GFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRK 717

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+ V E M       D+ T+++++    K+  L +A       L  G+    +    ++ 
Sbjct: 718 AMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLG 777

Query: 432 GLRHSGCRREAKKIQSKIR 450
           GL  +G   E+  + ++++
Sbjct: 778 GLESAGRIGESDMVLNEMK 796



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 213/447 (47%), Gaps = 11/447 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           N+ +  F +   L   EA++ +  + GV  D VT N ++   C+    D    +   M R
Sbjct: 107 NVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVR 165

Query: 70  EAGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             GI   DVV +NSL+ G  +   +  +  + + M   G+  DV  YNSL+  L + G+ 
Sbjct: 166 GGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEV 225

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  +   M    + P   T+ + +   C+    D+A  ++  + + G +P++VT + L
Sbjct: 226 DAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSAL 285

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + GLCK GR   A  + +E+   G APN +TY  ++    + ++    L +L  +  +G 
Sbjct: 286 VGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGV 345

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  ++    K G++ EA D     ++D    + V+Y  LI+  CK G ++ A  
Sbjct: 346 VMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQ 405

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR-- 366
           +L EME++    +  T + +I+GL K G +  A  ++  M + G D N+  Y  ++D   
Sbjct: 406 VLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSF 465

Query: 367 --LGKDGKID--HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             LG++  +D  H + + E +EV + F   S+V+ L K  ++  A  L     + GV + 
Sbjct: 466 KCLGQEAALDVYHEM-LCEGVEV-NKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLD 523

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 ++DGL  +G    A K+  ++
Sbjct: 524 HVNYTTLIDGLFKTGNLPAAFKVGQEL 550



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 186/422 (44%), Gaps = 41/422 (9%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M E G+  D V Y +LI G  +   L  +  +  E+ E  + PD   YN  ++CL 
Sbjct: 511 LFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            LGK  EA    ++M    L P   T+N M+    +   T  AL++  G+++    P L+
Sbjct: 571 MLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLI 630

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI---- 239
           TY+ LI GL +AG +  A+++L E+  SG +P ++T+  +++ C + R+  L LEI    
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWM 690

Query: 240 -------------------------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
                                          L  M  +G   D   +  +I    K G L
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
             A    +QM+  G+  ++ ++NTL+      G++  + ++L+EM+K+G E    T+ IL
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810

Query: 329 IDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           + G  K  N ++  RL+ E + K GF   +  YN ++    K G +  A  +F  M+   
Sbjct: 811 VTGYGKQSNKVEAVRLYCEMVGK-GFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            +  S TY  +V    K +      K L    + G    K    ++       G   EA+
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEAR 929

Query: 444 KI 445
           ++
Sbjct: 930 RL 931



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 35/369 (9%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           +LPD V YN+ I+  C         + L  M+  G+ PD VTYN++IA  +R    + +L
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL+ M    I P++ +Y++L+  LF+ G  ++A  +  +M     +P + T   +L   
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQAC 674

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            + R +D  L +   +   G   ++  YN L++ LC  G  R A  +L+E+   G AP+ 
Sbjct: 675 SQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDT 734

Query: 218 ITYTTIMKCCFRN-------RKYKL------------------GLE----------ILSA 242
           IT+  ++   F++         Y                    GLE          +L+ 
Sbjct: 735 ITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNE 794

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK++G       Y  ++  + K     EA     +MV  G    + +YN LI+ + K G 
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A  L +EM+ +G      T+ IL+ G  K  N    R  L+ M + GF  +    + 
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914

Query: 363 IVDRLGKDG 371
           I     K G
Sbjct: 915 ISRAFSKPG 923



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 114/235 (48%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+  YN L+   C          +L  M   GI+PD +T+N+LI G  ++  L  +
Sbjct: 694 GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               D+ML  GI P+V ++N+L+  L   G+  E++ V  +M    + P   T++I++ G
Sbjct: 754 FSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTG 813

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K      A+R++  +   GF+P++ TYN LI    K G +  A+ +  E+ + G  P 
Sbjct: 814 YGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPT 873

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           + TY  ++    + R      + L  MK KG++       ++  AF K G   EA
Sbjct: 874 SCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEA 928



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 95/202 (47%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +    K+  L+ A +     +  G+ P+V T+N L+              +LN
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLN 793

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M++ GI P  +TY+ L+ G  + S    ++ L  EM+  G  P V +YN+L+    ++G
Sbjct: 794 EMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  +F +M    + P + T++I+++G  K R      +  + +++ GF P   T +
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913

Query: 187 ILIKGLCKAGRLRTARWILKEL 208
            + +   K G    AR +LK L
Sbjct: 914 SISRAFSKPGMSWEARRLLKNL 935


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 217/437 (49%), Gaps = 18/437 (4%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNML---IDAYCQFVSFDA 60
           KL+ +LL   + T    NR E  + + +   RL V   +V +++L   +    +F+ F  
Sbjct: 143 KLALQLLKQVMETRIATNR-ELFDELTLSRDRLSVKSSIV-FDLLEGKLKKAREFIGF-- 198

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
                  M   G  P+VV+YN++I G +    +  +  +LD M   GI PD ++Y SL+ 
Sbjct: 199 -------MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 251

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            + + G+ +EA+ +F  M+   L P   T+N +++G C     + A      + K G +P
Sbjct: 252 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 311

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            + TYN+L+  L   GR+  A  ++KE+   G  P+AITY  ++    R    K   ++ 
Sbjct: 312 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLH 371

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  KG       Y ++I    +  R+KEA D  E+++  GV  D++ +N +I+ +C  
Sbjct: 372 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCAN 431

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G +E A++LL EM+++    D+ T   L+ G C+ G ++ AR+ L+ M   G   +  +Y
Sbjct: 432 GNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISY 491

Query: 361 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++   G+ G I  A  V + M          TY++++  LCK +    A +LL   + 
Sbjct: 492 NTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 551

Query: 417 SGVRILKSAQKAVVDGL 433
            G+    S   ++++G+
Sbjct: 552 KGISPDDSTYLSLIEGM 568



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 162/325 (49%), Gaps = 3/325 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  RLE+A  +    + +G++P+ VTYN LID YC     +  ++  + M + GI
Sbjct: 250 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 309

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V TYN L+        +  + D++ EM + GI PD  +YN L++   + G    A  
Sbjct: 310 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFD 369

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M+   + P   T+  ++  L +      A  +F  +   G  P+++ +N +I G C
Sbjct: 370 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHC 429

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G +  A  +LKE+      P+ +T+ T+M+   R  K +    +L  MK +G   D  
Sbjct: 430 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHI 489

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I+ + + G +K+A    ++M++ G    +++YN LI   CK  + + A  LL EM
Sbjct: 490 SYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549

Query: 314 EKQGFECDKYTHTILIDGLCKAGNI 338
             +G   D  T+  LI+G+   GN+
Sbjct: 550 VNKGISPDDSTYLSLIEGM---GNV 571



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 4/267 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    N+ V       R+ +A+ +I +  + G++PD +TYN+LI+ Y +  +    + + 
Sbjct: 312 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLH 371

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLF 123
           N M   GI P  VTY SLI   +R + +  + DL +++L+ G+ PDV  +N+++  HC  
Sbjct: 372 NEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHC-- 429

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  + A  + ++M    + P   TFN ++ G C+    + A  +   ++  G  P+ +
Sbjct: 430 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHI 489

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YN LI G  + G ++ A  +  E+   G  P  +TY  ++KC  +N++  L  E+L  M
Sbjct: 490 SYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKE 270
             KG + D   Y ++I     +  L E
Sbjct: 550 VNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 16/221 (7%)

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVT----------DGVQL--DIVSYNTLINLY 297
            D   YC  +    ++   K A   ++Q++           D + L  D +S  + I   
Sbjct: 124 LDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFD 183

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
             EGKL+ A   +  ME  GF+ +  ++  +I G    GNI+GAR  L+ M   G + + 
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             Y  ++  + K+G+++ A  +F+ M     V ++ TY++++   C    L  A      
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            +K G+    S    +V  L   G   EA  +  ++R   I
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 344


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 215/446 (48%), Gaps = 25/446 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            CKA  L+KA+ ++      GV  +V+TY+++ID  C+    D    I   M    G  P
Sbjct: 83  LCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVP 142

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVT+NSL+ G      +S +  L + M + G  P+V SY++L+  L + G+ DEA R++
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY---------- 185
           ++M+     P    +   + GLCK      A    R +   G   + V +          
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262

Query: 186 -------NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                  N +I+ LC++G L  A    +E+    H P+A  + T++    ++++   G+ 
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322

Query: 239 ILSAMK--RKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           +   MK  ++ Y       Y  ++    K  +L EA + + +M   G+  D+V+Y+ L++
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CK GKL+ A  LL+EM K+G   D +T   +++ L KAG +  A  HLE M   G   
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +L  YN ++D L K G+ID AI     M       D F+Y+ ++  LC++ +   A  + 
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSG 437
              +K GV        +++DGL  +G
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNG 528



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 188/419 (44%), Gaps = 27/419 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA RL++A  +  + +    +PD+V Y   +   C+            +M   G   D
Sbjct: 189 LCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 77  VVTY-----------------NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
            V +                 N +I    R+ +L  +    +EM+    PP    +N+L+
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 120 HCLFQLGKPDEANRVFQDMICGD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           H + +  +  +   +FQ M         P   T+NIM++ LCK +  D A  +   +  +
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P++VTY+ L+ GLCK G+L  A  +L+E+   G  P++ T  +I+    +  K    
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L  L  MK +G T D   Y T++    K GR+ EA  ++ +MV      D+ SY  +I  
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITA 488

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            C+ G+   A+ +  EM K+G   D   +  L+DGL + G      L LE +       +
Sbjct: 489 LCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL---EDLALELLKTSLCKPD 545

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +  +VD L K GK + A  V E M       D+FTY ++V  L K  ++  A +L+
Sbjct: 546 FVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLV 604



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 203/446 (45%), Gaps = 25/446 (5%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G + G    V TYN  +DA  +  +    Y    +M+  G  PD  TY+ ++ G  +   
Sbjct: 29  GRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGE 88

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFN 151
           L  + +LL ++ E G+  +V +Y+ ++    +  + D+A  +F+ M   G   P   TFN
Sbjct: 89  LDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFN 148

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +L GLC       A  +F  + K G  P +++Y+ L+ GLCKAGRL  A  + +E+ + 
Sbjct: 149 SLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK 208

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
              P+ + YT+ +    +  +     +    M  KG   D   + TVI    K G  +EA
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA 268

Query: 272 TDYM-----------------EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            + M                 E+M++         +NTLI+  CK  +L    LL   M+
Sbjct: 269 QNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328

Query: 315 K-QGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
             + F C     T+ I++D LCKA  +  A+  +  M   G   ++  Y+ +VD L K G
Sbjct: 329 SMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLG 388

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K+D A ++ E M       DSFT +S+++ L KA ++  A   L +    G         
Sbjct: 389 KLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYN 448

Query: 428 AVVDGLRHSGCRREAKKIQSKIRMAK 453
            ++DGL  +G   EA    +K+  AK
Sbjct: 449 TLLDGLCKAGRIDEAITFLAKMVAAK 474



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 20/317 (6%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGI----RLGVL------PDVVTYNMLIDAYCQF 55
           S  L N  +   CK+ RL        DG+    R+  +      P++ TYN+++D  C+ 
Sbjct: 300 SAELFNTLIHAVCKSKRLP-------DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA 352

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
              D    ++N M   G+SPDVVTY++L+ G  +   L  + DLL+EM + G+ PD ++ 
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
            S+++ L + GK D A    + M     TP   T+N +L+GLCK    D A+     +  
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
               P++ +Y I+I  LC++G+   A  I +E+   G  P+ + Y +++    RN    L
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            LE+L     K    D   +  V+    K G+ ++A + +E+M   G   D  +Y  ++ 
Sbjct: 533 ALELLKTSLCKP---DFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVR 589

Query: 296 LYCKEGKLEAAYLLLDE 312
              K GK++ A  L+D+
Sbjct: 590 GLRKLGKVDKARQLVDD 606



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 67/268 (25%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   CKA +L++A+ ++ +    G+ PDVVTY+ L+D  C+    D    +L  M +
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402

Query: 71  AGI-----------------------------------SPDVVTYNSLIAGATRNSLLSC 95
            G+                                   +PD+VTYN+L+ G  +   +  
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++  L +M+     PDV+SY  ++  L + G+   A+ +FQ+M+   + P T  ++ +L+
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522

Query: 156 GLCKNRYTDNALRMFR----------------GLQKHG----------------FVPELV 183
           GL +N   D AL + +                GL K G                F  +  
Sbjct: 523 GLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAF 582

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDS 211
           TY  +++GL K G++  AR ++ +  ++
Sbjct: 583 TYINVVRGLRKLGKVDKARQLVDDASET 610



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 17/198 (8%)

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  F  +GR K            G Q  + +YN  ++   K    + AY    +M+++
Sbjct: 20  TIVRLFDWLGRQK------------GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G+  D +T++I++ GLCKAG +  A+  L  + + G   N+  Y+ ++D   K  ++D A
Sbjct: 68  GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127

Query: 377 INVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           + +F++M      V D  T++S++  LC  +R+  A  L     K+G      +   ++D
Sbjct: 128 LEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187

Query: 432 GLRHSGCRREAKKIQSKI 449
           GL  +G   EA ++  ++
Sbjct: 188 GLCKAGRLDEACRLWEEM 205


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 215/472 (45%), Gaps = 50/472 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRL-----GVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            C  NR ++A    +D +R+     GV  PDVVTYN +I  + +         + + M +
Sbjct: 89  LCDDNRSQQA----LDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQ 144

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVVT+NS+I    +   +  +  LL +M++ G+PP+  +Y S++H    LG+ +E
Sbjct: 145 QGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEE 204

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F++M    L P   ++N  ++ LCK+  +  A  +F  +   G  P +VTY IL+ 
Sbjct: 205 ATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLH 264

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G           +   G   N + +T ++    +       + ILS M+ +G + 
Sbjct: 265 GYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSP 324

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY------------- 297
           D F Y T+I+A  ++GRL +A D   QM+  GVQ + V Y++LI  +             
Sbjct: 325 DVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELV 384

Query: 298 -----------------------CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                                  CKEG++  A+ + D ++  G   D      LIDG C 
Sbjct: 385 YEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCL 444

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFT 390
            G +  A   L+ M   G   +   YN +V+   K G+ID  +N+F  M  K     + T
Sbjct: 445 VGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVT 504

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           Y+ ++  L +A R  +A K+L   +  G  +       ++ GL  + C  EA
Sbjct: 505 YNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 208/518 (40%), Gaps = 110/518 (21%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  ++ KA  +  + ++ G +PDVVT+N +I+A C+  + D    +L +M +
Sbjct: 120 NTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVD 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VTY S+I G +       +  +  EM   G+ PD+ S+NS M  L + G+  E
Sbjct: 180 NGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKE 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC-------------------------------- 158
           A  +F  M      P   T+ I+L+G                                  
Sbjct: 240 AAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILID 299

Query: 159 ---KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              K    D A+ +   +Q  G  P++ TY+ LI  LC+ GRL  A     ++  +G  P
Sbjct: 300 AYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP 359

Query: 216 NAITYTTIMK----------------------------CCFRNRKYKLGLE--------I 239
           N + Y ++++                              F +  + +  E        I
Sbjct: 360 NTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHI 419

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              +K  G   D   + T+I  +  +G + +A   ++ M++ G+  D  +YNTL+N Y K
Sbjct: 420 FDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFK 479

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G+++    L  EM  +  +    T+ I++DGL +AG    A+  L  M   G   +L  
Sbjct: 480 SGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPT 539

Query: 360 YNCIVDRLGKDGKIDHAINVFESM--------------------------EVKDSF---- 389
           YN I+  L ++   D AI +F+ +                          E KD F    
Sbjct: 540 YNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAIS 599

Query: 390 ---------TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                    TY  M+ NL K   +  A  +  S  KSG
Sbjct: 600 DSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 170/378 (44%), Gaps = 7/378 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P + TY  ++ G  R       L     +L  G+  D  + N+++ CL    + D+A +V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 135 -FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV--PELVTYNILIKG 191
             + M      P   ++ I+L  LC +  +  AL + R + K   V  P++VTYN +I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
             K G++  A  +  E+   G  P+ +T+ +I+    + R       +L  M   G   +
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y ++I  +  +GR +EAT    +M   G+  DIVS+N+ ++  CK G+ + A  +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M  +G   +  T+ IL+ G    G           M   G  +N   +  ++D   K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +D A+ +   M+ +    D FTYS+++  LC+  RL  A       + +GV+       
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 428 AVVDGLRHSGCRREAKKI 445
           +++ G    G   +AK++
Sbjct: 366 SLIQGFCTHGDLVKAKEL 383



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 129/270 (47%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  V + CK  R+  A  I      +G   D++ +N LID YC        +++L+ M
Sbjct: 399 FFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAM 458

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             AGI PD  TYN+L+ G  ++  +   L+L  EM +  I P   +YN ++  LF+ G+ 
Sbjct: 459 ISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRT 518

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A ++  +MI    T    T+NI+L GLC+N  TD A+ MF+ L        + T N +
Sbjct: 519 VAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTM 578

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  +    R   A+ +   + DSG  PNA TY  +++   +    +    + S+M++ G 
Sbjct: 579 INSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                     I   ++ G + +A +YM ++
Sbjct: 639 APCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 5/381 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  I +  + K   +++A  I+ +    G+ PDV TY+ LI A C+           N+M
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGK 127
              G+ P+ V Y+SLI G   +  L  + +L+ EM+  GIP P++  +NS++H + + G+
Sbjct: 353 IGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412

Query: 128 PDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
             +A+ +F D++   G+ +     FN +++G C       A  +   +   G  P+  TY
Sbjct: 413 VMDAHHIF-DLVKDIGERSDII-MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTY 470

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N L+ G  K+GR+     + +E+ D    P  +TY  I+   FR  +     ++L  M  
Sbjct: 471 NTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIG 530

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G T     Y  ++    +     EA    +++ T  V+ +I + NT+IN      + E 
Sbjct: 531 CGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREE 590

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L   +   G   +  T+ I+I  L K G+++ A      M K G        N  + 
Sbjct: 591 AKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIR 650

Query: 366 RLGKDGKIDHAINVFESMEVK 386
            L + G+I  A N    ++ K
Sbjct: 651 TLLEKGEIVKAGNYMSKVDGK 671


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 206/434 (47%), Gaps = 40/434 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA RL++A  +  +      +P V  YN +I  Y     FD  Y++L R +  G 
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V+ YN ++    R   +  +L + DEM +    P++ +YN L+  L + G+ + A +
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M    L P   T NIM++ LCK +  D A  +F GL      P+  T+  LI GL 
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTI------------------------------ 223
           + GR+  A  + +++ DS   PN + YT++                              
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM 553

Query: 224 -----MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                M C F+  + + G  +   +K +G   D   Y  +I   VK G  +E      +M
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G+ LD+++YNT+I+ +CK GK++ AY LL+EM+ +G +    T+  ++DGL K   +
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E    IG D N+  Y+ ++D  GK G+ID A  + E +  K    +S+T++ +
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733

Query: 395 VHNLCKAKRLPSAS 408
           +  L KA+ +  A 
Sbjct: 734 LDALVKAEEIDEAQ 747



 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 221/453 (48%), Gaps = 20/453 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA  LE A  +       G+ P+++T N++ID  C+    D   +I   +  
Sbjct: 416 NILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH 475

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SPD  T+ SLI G  R   +  +  L ++ML+    P+V  Y SL+   F+ G+ ++
Sbjct: 476 KVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED 535

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            ++++++M+    +P     N  ++ + K    +    +F  ++  G VP++ +Y+ILI 
Sbjct: 536 GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIH 595

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG  R    +  E+ + G   + + Y T++    ++ K     ++L  MK KG   
Sbjct: 596 GLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQP 655

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +V+    KI RL EA    E+  + GV L++V Y++LI+ + K G+++ AYL+L
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E+ ++G   + YT   L+D L KA  I  A++  + M  +    N   Y+ +++ L   
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI 775

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL-----------LSCL 415
            K + A   ++ M+ +    ++ TY++M+  L KA  +  A  L             +C 
Sbjct: 776 RKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACY 835

Query: 416 KSGVRILKSAQKA-----VVDGLRHSGCRREAK 443
            + +  L SA KA     V +  R  GCR  +K
Sbjct: 836 NAMIEGLSSANKAMDAYIVFEETRLKGCRVNSK 868



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 183/410 (44%), Gaps = 42/410 (10%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V +F K+++L++A  +I    +    P    Y  LI A       D   T+ ++M+E G 
Sbjct: 175 VASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGY 234

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             +V  + +L+    R   +  +L LLDEM       D+  YN  + C  ++GK D A +
Sbjct: 235 EANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWK 294

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F +M    L P   T+  ++  LCK R  D A+ +F  L  +  VP +  YN +I G  
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            AG+   A  +L+     G  P+ I Y  I+ C  R                        
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRK----------------------- 391

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
                       G+++EA    ++M  D    ++ +YN LI++ CK G+LEAA  + D M
Sbjct: 392 ------------GKVEEALRIHDEMRQDAAP-NLTTYNILIDMLCKAGELEAALKVQDTM 438

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           ++ G   +  T  I+ID LCKA  +  A  + L   +K+    +   +  ++D LG+ G+
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC-SPDSRTFCSLIDGLGRRGR 497

Query: 373 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +D A +++E M    ++ +   Y+S++ N  K  R     K+    +  G
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG 547



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 166/386 (43%), Gaps = 40/386 (10%)

Query: 6   STRLLNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           S ++ N+ V T     F K  R E    I  + +  G  PD++  N  +D   +    + 
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G  +   ++  G+ PDV +Y+ LI G  +      +  L  EM E G+  DV +YN+++ 
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVID 630

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              + GK D+A ++ ++M    L P   T+  +++GL K    D A  +F   +  G   
Sbjct: 631 GFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +V Y+ LI G  K GR+  A  IL+EL   G  PN+ T+  ++                
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLD--------------- 735

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                               A VK   + EA    + M       + ++Y+ +IN  C  
Sbjct: 736 --------------------ALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI 775

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            K   A++   EM+KQG + +  T+T +I GL KAGN+  AR   +     G   +   Y
Sbjct: 776 RKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACY 835

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK 386
           N +++ L    K   A  VFE   +K
Sbjct: 836 NAMIEGLSSANKAMDAYIVFEETRLK 861



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 169/382 (44%), Gaps = 7/382 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V  YN  +    +  + D    IL  M  AG          L+A   ++  L  +  +
Sbjct: 133 PEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGV 190

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           ++ M +    P   +Y +L+  L    +PD    +F  M           F  ++    +
Sbjct: 191 IEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAR 250

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D AL +   ++ + F  +LV YN+ I    K G++  A     E+   G  P+ +T
Sbjct: 251 EGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVT 310

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YTT++    + R+    +E+   +         + Y T+I  +   G+  EA   +E+  
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQK 370

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G    +++YN ++    ++GK+E A  + DEM +Q    +  T+ ILID LCKAG ++
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELE 429

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A    + M + G   N+   N ++DRL K  K+D A ++F  ++ K    DS T+ S++
Sbjct: 430 AALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLI 489

Query: 396 HNLCKAKRLPSASKLLLSCLKS 417
             L +  R+  A  L    L S
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDS 511



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 9/292 (3%)

Query: 166 ALRMFRGLQK---HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           A + FR +++       PE+  YN  +  + +   L     IL+E+  +G   +      
Sbjct: 116 AFQYFRWVERKTQQAHCPEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE 173

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    ++ K K    ++  M++  +      Y T+I A     R         QM   G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            + ++  + TL+ ++ +EG+++AA  LLDEM+   F  D   + + ID   K G +  A 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNL 398
                M   G   +   Y  ++  L K  ++D A+ +FE +++  S    + Y++M+   
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             A +   A  LL    + G      A   ++  L   G   EA +I  ++R
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 44/443 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA RL +AE +         +P    YN +I  Y     F+  Y +L R+RE G 
Sbjct: 157 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 216

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV++NS++    +   +  +L L  E+++    P+  +YN ++  L   G+ +EA R
Sbjct: 217 IPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 275

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M    L P   T NIM++ LCK R  + A ++F    + G  P+ VTY  LI GL 
Sbjct: 276 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 335

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           K G++  A  + +++ D+GH  N + YT                                
Sbjct: 336 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLT 395

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  I   ++  G+  D   Y  +I    K G+ +E ++    M
Sbjct: 396 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 455

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G  LD  +YN +++ +CK GK+  AY +L+EM+++  +    T+  ++DGL K   +
Sbjct: 456 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E     G + N+  Y+ ++D  GK G+ID A  + E M  K    + +T++S+
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575

Query: 395 VHNLCKAKRLPSASKLLLSCLKS 417
           +  L KA+ +  A    L C +S
Sbjct: 576 LDALVKAEEINEA----LVCFQS 594



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 200/412 (48%), Gaps = 4/412 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +NI V   CKA +LE+A  I     + G  PD VTY  LID   +    D  Y +  +M 
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 351

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +AG + + V Y SLI     +        +  E++  G  PD+   N+ M C+F+ G+ +
Sbjct: 352 DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 411

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +   +F+D+      P   +++I+++GL K         +F  +++ GF  +   YN ++
Sbjct: 412 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 471

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK+G++  A  IL+E+ +    P   TY  I+    +  +      +    K KG  
Sbjct: 472 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 531

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y ++I  F K+GR+ EA   +E+M+  G+  ++ ++N+L++   K  ++  A + 
Sbjct: 532 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 591

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M++     + YT++ILI+GLC+      A +  + M K G   N+  Y  ++  L K
Sbjct: 592 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 651

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            G I  A ++FE  +    + D+ ++++++  +  A R   A +  +  L S
Sbjct: 652 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLSS 703



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 199/402 (49%), Gaps = 4/402 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+  TYN++ID  C     +  Y IL+ M  A + P+++T N ++    +   L  +  +
Sbjct: 252 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 311

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +   + G  PD  +Y SL+  L + G+ DEA R+F+ M+          +  ++     
Sbjct: 312 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 371

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +   ++  ++F+ L + G  P+L   N  +  + KAG +   R I +++   G  P+  +
Sbjct: 372 HGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 431

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++    +  + +    I  AMK++G+  D   Y  V+  F K G++ +A + +E+M 
Sbjct: 432 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              VQ  + +Y  +++   K  +L+ AY+L +E + +G E +   ++ LIDG  K G I 
Sbjct: 492 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 551

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSSMV 395
            A L LE M K G   N+  +N ++D L K  +I+ A+  F+SM E+K   +++TYS ++
Sbjct: 552 EAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 611

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           + LC+ ++   A        K G+         ++ GL   G
Sbjct: 612 NGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 203/471 (43%), Gaps = 40/471 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A RL+ A   +    RL   P    Y +LI A  +    +    +L +M+E G    V 
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            + +L+    R   ++ +L L+DE+    + PD+  YN  + C  + G  D A + F ++
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   ++  M+  LCK      A  +F  ++    VP    YN +I G   AGR 
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L+ L + G  P+ +++ +I+ C  + RK    L +   MK+     +   Y  +
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP-NSSTYNII 260

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I      GR++EA   +++M    +  ++++ N +++  CK  KLE AY + +   ++G 
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY------------------ 360
             D  T+  LIDGL K G +  A    E M   G ++N   Y                  
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 380

Query: 361 -----------------NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
                            N  +D + K G+++    +FE +     + D  +YS ++H L 
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           KA +    S +  +  + G  +   A  AVVDG   SG   +A +I  +++
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 203/464 (43%), Gaps = 44/464 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +    +A R E+A  ++     +G    V  +  L+ A  +         +++ ++ 
Sbjct: 49  TVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKG 108

Query: 71  AGISPDVVTYNSLIA--GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           + + PD+V YN  I   G   N  ++C      E+   G+ PD  SY S++  L + G+ 
Sbjct: 109 SCLEPDIVLYNVCIDCFGKAGNVDMACK--FFHELKAQGLKPDDVSYTSMIWVLCKAGRL 166

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNG-------------------------------- 156
            EA  +F  M      PC   +N M+ G                                
Sbjct: 167 GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSI 226

Query: 157 ---LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
              L K R  D AL +F  ++K    P   TYNI+I  LC  GR+  A  IL E+  +  
Sbjct: 227 LTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 285

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +T   ++    + RK +   +I  +  ++G   D   YC++I    K G++ EA  
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E+M+  G   + V Y +LI  +   G+ E  + +  E+ ++G + D       +D + 
Sbjct: 346 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVF 405

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           KAG ++  R+  E +   GF  ++ +Y+ ++  L K G+     N+F +M+ +    D+ 
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            Y+++V   CK+ ++  A ++L    +  V+   +   A+VDGL
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 118/221 (53%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R  N  V  FCK+ ++ KA  I+ +     V P V TY  ++D   +    D  Y +
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +VV Y+SLI G  +   +  +  +L+EM++ G+ P+V+++NSL+  L +
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 581

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M      P T T++I++NGLC+ +  + A   ++ +QK G VP +VT
Sbjct: 582 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 641

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL K G +  A  + +    +G  P+A ++  +++
Sbjct: 642 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 682



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 3/259 (1%)

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L + R  D+A+     +++  F P    Y +LI  L +A R   A  +L+++ + G+  
Sbjct: 19  ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
               +TT+++   R  +    L ++  +K      D   Y   I  F K G +  A  + 
Sbjct: 79  GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFF 138

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            ++   G++ D VSY ++I + CK G+L  A  L  +ME +      Y +  +I G   A
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 198

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYS 392
           G  + A   LE + + G   ++ ++N I+  LGK  K+D A+++FE M+     +S TY+
Sbjct: 199 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 258

Query: 393 SMVHNLCKAKRLPSASKLL 411
            ++  LC   R+  A ++L
Sbjct: 259 IIIDMLCLGGRVEEAYRIL 277



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 77/154 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+  L +  +  F K  R+++A  I+ + ++ G+ P+V T+N L+DA  +    +    
Sbjct: 531 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 590

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M+E    P+  TY+ LI G  R    + +     +M + G+ P+V +Y +++  L 
Sbjct: 591 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 650

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++G   +A  +F+        P  A+FN ++ G+
Sbjct: 651 KVGNITDAYSLFERFKANGGIPDAASFNALIEGM 684


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 224/438 (51%), Gaps = 15/438 (3%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIID------GIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           R  N  +  F +A R   A+A          G R+   P++ TYN+++ + C     D  
Sbjct: 121 RSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIA--PNLQTYNIMLRSLCVRGDLDRA 178

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            T+ + +R  G++PD +TY++L++G  +N+ L  +L LLDEM    + PD   YN+L+  
Sbjct: 179 VTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGG 238

Query: 122 LFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            F+ G+ ++A RV++ ++     +P  AT+N+ML+GLCK      A  ++  +  +   P
Sbjct: 239 CFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQP 298

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +++TY  +I GLC++  + +A  +  E+  +G  P+ + Y +++K      +     +  
Sbjct: 299 DMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFW 358

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCK 299
            +M   G   +   Y  ++      G + +ATD  E +   D +  D+V+++T+I+  C+
Sbjct: 359 DSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCE 417

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G    +  +L+E    G E D+++++ +I GLCK G +  A    E ++   F  N   
Sbjct: 418 KGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHI 477

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++   +  K   AI V+  M   D    + TY++++H LCKA++   AS+     L
Sbjct: 478 YNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREML 537

Query: 416 KSGVRILKSAQKAVVDGL 433
           + G  +  +   +++ GL
Sbjct: 538 EKGCMLDVNTYGSLIRGL 555



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 229/483 (47%), Gaps = 47/483 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI + + C    L++A   + D +R  G+ PD +TY+ L+  + +    D    +L+ M 
Sbjct: 163 NIMLRSLCVRGDLDRA-VTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMP 221

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKP 128
              + PD V YN+L+ G  RN     ++ + ++++ + G  P++ +YN ++  L +LG  
Sbjct: 222 SYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMF 281

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  V++ M+  +  P   T+  M++GLC++   D+A R++  + K G VP++V YN L
Sbjct: 282 KEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSL 341

Query: 189 IKGLCKAGRLRTAR--W----------------ILKELGDSGH----------------- 213
           +KG C AGR+  A   W                +LK L D G                  
Sbjct: 342 LKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSL 401

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P+ +T++T++            L+IL   +  G   D F Y ++I+   K GRL +A  
Sbjct: 402 SPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVK 461

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E++  D  + +   YN LIN +C+  K   A  +  +M +        T+  LI GLC
Sbjct: 462 LYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLC 521

Query: 334 KAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           KA   ++ +R   E + K G   ++  Y  ++  L +D KID A+ ++  +  K    D 
Sbjct: 522 KAEKYLEASRFTREMLEK-GCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDV 580

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS--AQKAVVDGLRHSGCRREAKKIQ 446
             ++ ++H LC A ++  AS+ LLS +K       +      ++DG   +GC  +A  + 
Sbjct: 581 VMHNILIHGLCSAGKVDEASQ-LLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW 639

Query: 447 SKI 449
             I
Sbjct: 640 MAI 642



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 201/415 (48%), Gaps = 7/415 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK    ++A  +    +     PD++TY  +I   C+    D+   + + M +
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVV YNSL+ G      +  +    D M   GI  +V SYN ++  LF  G  D+
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387

Query: 131 ANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A  +++ +   D L+P   TF+ M++GLC+  + + +L++    +  G   +  +Y+ +I
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK GRL  A  + +++      PN+  Y  ++    +  K+   + + S M     +
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y T+I    K  +  EA+ +  +M+  G  LD+ +Y +LI   C++ K++ A  L
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            +++  +G + D   H ILI GLC AG + + ++L  E   K     N+  YN ++D   
Sbjct: 568 WNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFY 627

Query: 369 KDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + G  D A    + + E+  V D  +Y++ +  LC   R P   +LL   L SG+
Sbjct: 628 ETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGI 682



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 11/356 (3%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 161
           +G  P V S+N+L+    +  +  +A+  F  +  G     + P   T+NIML  LC   
Sbjct: 114 LGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRG 173

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A+ +F  L+  G  P+ +TY+ L+ G  K  RL  A ++L E+      P+A+ Y 
Sbjct: 174 DLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYN 233

Query: 222 TIMKCCFRNRKYKLGLEILSAMKR-KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            ++  CFRN +++  + +   + R  G + +   Y  ++    K+G  KEA D  E+MV 
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +  Q D+++Y T+I+  C+   +++A  +  EM K G   D   +  L+ G C AG +  
Sbjct: 294 NNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGE 353

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMV 395
           A    + M+  G   N+ +YN ++  L   G +D A +++E +E  DS      T+S+M+
Sbjct: 354 AWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMI 412

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           H LC+      + ++L     SG  + + +  +++ GL   G   +A K+  KI M
Sbjct: 413 HGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 36/393 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI--- 73
            C++  ++ A  +  + I+ G++PDVV YN L+  +C        +   + M  +GI   
Sbjct: 310 LCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNV 369

Query: 74  --------------------------------SPDVVTYNSLIAGATRNSLLSCSLDLLD 101
                                           SPD+VT++++I G       + SL +L+
Sbjct: 370 TSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILE 429

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E    G   D +SY+S++  L + G+ D+A ++++ +      P +  +N ++NG C+  
Sbjct: 430 EARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQAS 489

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
              +A+R++  + ++   P  +TYN LI GLCKA +   A    +E+ + G   +  TY 
Sbjct: 490 KFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYG 549

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT- 280
           ++++   R++K    L + + +  KG   D   +  +I      G++ EA+  + +M   
Sbjct: 550 SLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEK 609

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +    ++V+YNTL++ + + G  + A  L   + + G   D  ++   I GLC       
Sbjct: 610 NNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPE 669

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
               L  M   G       +N +V  + K G I
Sbjct: 670 GVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ + N  +  FC+A++   A  +          P  +TYN LI   C+   +     
Sbjct: 472 KPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASR 531

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M E G   DV TY SLI G  R+  +  +L L +++L+ G+  DV  +N L+H L 
Sbjct: 532 FTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLC 591

Query: 124 QLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             GK DEA+++  +M    +  P   T+N +++G  +    D A  ++  + ++G VP++
Sbjct: 592 SAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDI 651

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           ++YN  IKGLC   R      +L E+  SG  P AIT+  +++   +
Sbjct: 652 ISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 11/262 (4%)

Query: 14  VCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +   CK  RL+ A    E I +D  +    P+   YN LI+ +CQ   F     + ++M 
Sbjct: 447 ISGLCKDGRLDDAVKLYEKISMDSFK----PNSHIYNALINGFCQASKFSDAIRVYSQMA 502

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E   SP  +TYN+LI G  +      +     EMLE G   DV +Y SL+  L +  K D
Sbjct: 503 ENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKID 562

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNIL 188
            A  ++  ++   L       NI+++GLC     D A ++   + +K+   P +VTYN L
Sbjct: 563 GALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTL 622

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 247
           + G  + G    A  +   + ++G  P+ I+Y T +K  C  NR  + G+++L+ M   G
Sbjct: 623 MDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPE-GVQLLNEMLASG 681

Query: 248 YTFDGFGYCTVIAAFVKIGRLK 269
                  +  ++ A +K G ++
Sbjct: 682 IIPTAITWNILVRAVIKYGPIQ 703



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 1/195 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   CKA +  +A     + +  G + DV TY  LI   C+    D    + 
Sbjct: 509 TTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALW 568

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQ 124
           N++ + G+  DVV +N LI G      +  +  LL EM E     P+V +YN+LM   ++
Sbjct: 569 NQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYE 628

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D+A  ++  ++   L P   ++N  + GLC    T   +++   +   G +P  +T
Sbjct: 629 TGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAIT 688

Query: 185 YNILIKGLCKAGRLR 199
           +NIL++ + K G ++
Sbjct: 689 WNILVRAVIKYGPIQ 703


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 211/434 (48%), Gaps = 6/434 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   L+ AE I+   I  G +PD  TY  LI+  CQ    D    + N    
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V+ YN LI G  +  L+  +L +++EM E G   D+W+YN +++ L ++G   +
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +  D I     P   TFN +++G CK    +  +++   +  HG  P+++TYN ++ 
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLN 504

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KA +        + + + G  PN ITY  + +   +  K    L+++  +  KG T 
Sbjct: 505 GLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITP 564

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           D   + T+I+ F   G LK A     +M     V     +YN +IN + ++  L     L
Sbjct: 565 DTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKL 624

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             EM   G   D YT+ ++IDG C  GN   G +  LE + K GF  +L  +  +++ L 
Sbjct: 625 FLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK-GFIPSLTTFGRVINCLC 683

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRLPSASKLLLSCLKSGVRILKSAQK 427
              ++  A+++   M V +      +V+++ +A K++ +A K+++  L     I   A +
Sbjct: 684 VQHRVHEAVDIIHFM-VHNGIV-PEVVNSISEADKKVVAAPKIVVEDLLKRSCITYYAYE 741

Query: 428 AVVDGLRHSGCRRE 441
            + DG+R    +++
Sbjct: 742 LLYDGIRDKKTQKQ 755



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 229/488 (46%), Gaps = 44/488 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           ++NI V    ++   ++A  + +    +G++PDV T+ + I ++C+     +   +LN M
Sbjct: 117 IMNILV----ESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNM 172

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G   + V Y +++AG    +    + +L ++ML +GI PDV ++N L+H L + G+ 
Sbjct: 173 VSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEV 232

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ R+   ++   +     TFNI + GLC+      A+ M   + + G  P++VTYN L
Sbjct: 233 QESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTL 292

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK   +  A   L +L + G  P+  TY T++    +    +   +IL     KG+
Sbjct: 293 ICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGF 352

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D F YC++I    +   +  A       +  G++  ++ YN LI   C+EG +  A  
Sbjct: 353 VPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQ 412

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA--------------------------- 341
           +++EM + G   D +T+ ++I+GLCK G +  A                           
Sbjct: 413 MMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYC 472

Query: 342 -----RLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
                   ++ +NK+   G   ++  YN +++ L K  K +  +  FE+M     V +  
Sbjct: 473 KQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKI 532

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TY+ +  +LCKA ++  A  L+   L  G+     +   ++ G  ++G  + A ++  ++
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592

Query: 450 -RMAKISH 456
               K+SH
Sbjct: 593 GEQYKVSH 600



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 197/414 (47%), Gaps = 5/414 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C+   L  A +++   IR G+ PDVVTYN LI   C+  +       L+++ 
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLV 313

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD  TYN+LI G  +  +L  +  +L   +  G  PD ++Y SL++ L Q  + D
Sbjct: 314 NGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F   +   L P    +N+++ GLC+      AL+M   + ++G   ++ TYN++I
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G +  A  ++ +    G+ P+  T+ T++    +  K +  ++IL+ M   G T
Sbjct: 434 NGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVT 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y +V+    K  + ++  +  E MV  G   + ++YN L    CK GK+  A  L
Sbjct: 494 PDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDL 553

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA-YNCIVDRLG 368
           +DE+  +G   D  +   +I G    G++KGA      M +    S+  A YN +++   
Sbjct: 554 VDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFA 613

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +   +     +F  M       D++TY  M+   C      S  K LL  ++ G
Sbjct: 614 EKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKG 667



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 191/401 (47%), Gaps = 4/401 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V++YN +++   +   F   + +  RM+  GI PDV T+   I    R      +L L
Sbjct: 109 PSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRL 168

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M+  G   +  +Y +++   ++     EA  +F DM+   + P  +TFN +L+ LCK
Sbjct: 169 LNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCK 228

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 + R+   + K G    L T+NI I+GLC+ G L  A  +L  +   G  P+ +T
Sbjct: 229 KGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVT 288

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    +N       + L  +   G   DGF Y T+I  + K+G L+ A   ++  +
Sbjct: 289 YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAI 348

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D  +Y +LIN  C+  +++ A  L +    +G +     + +LI GLC+ G I 
Sbjct: 349 CKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLIL 408

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A   +  M++ G  S++  YN +++ L K G +  A N+         V D FT+++++
Sbjct: 409 QALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
              CK  ++ +  ++L      GV        +V++GL  +
Sbjct: 469 DGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 141/315 (44%), Gaps = 1/315 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  L N+ +   C+   + +A  ++ +    G   D+ TYN++I+  C+         
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++N     G  PDV T+N+LI G  +   +  ++ +L++M   G+ PDV +YNS+++ L 
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  K ++    F+ M+     P   T+NI+   LCK    + AL +   +   G  P+ V
Sbjct: 508 KAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTV 567

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEILSA 242
           ++  +I G    G L+ A  + + +G+     +      IM   F  +    +G ++   
Sbjct: 568 SFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLE 627

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M   G   D + Y  +I  F   G       ++ +M+  G    + ++  +IN  C + +
Sbjct: 628 MGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHR 687

Query: 303 LEAAYLLLDEMEKQG 317
           +  A  ++  M   G
Sbjct: 688 VHEAVDIIHFMVHNG 702



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 162/356 (45%), Gaps = 4/356 (1%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++D+ + M      P V SYN++M+ L + G   +A++VF  M    + P   TF I + 
Sbjct: 95  AVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIK 154

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C+ +   +ALR+   +   G     V Y  ++ G  +      A  +  ++   G  P
Sbjct: 155 SFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFP 214

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  T+  ++    +  + +    +L+ + +KG   + F +   I    + G L  A   +
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + ++ +G+  D+V+YNTLI   CK   +  A   L ++   G E D +T+  LIDG CK 
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKM 334

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++ A   L+     GF  +   Y  +++ L ++ +ID A+ +F +   K        Y
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + ++  LC+   +  A +++    ++G          V++GL   GC  +A  + +
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMN 450



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +  F +   L   E + ++    G  PD  TY ++ID +C   + D+GY  L
Sbjct: 601 TTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFL 660

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
             M E G  P + T+  +I        +  ++D++  M+  GI P+V
Sbjct: 661 LEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 218/444 (49%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  ++++A +++I     G +PDVV+Y++++D YCQ         ++  ++ 
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TYNS+I+   +   +  +  +L  M    I PD   Y +L+    + G    
Sbjct: 316 KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSV 375

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++F +M    + P   T+  M++GLC+      A ++F  +   G  P+ VTY  LI 
Sbjct: 376 EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALID 435

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAG ++ A  +  ++ + G  PN +TYT ++    +  +  +  E+L  M  KG   
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K+G +++A   ME+M   G   D ++Y T+++ YCK G++  A+ LL
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M  +G +    T  +L++G C +G ++     +++M   G   N   +N ++ +    
Sbjct: 556 RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIR 615

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +   I +++ M     V D+ TY+ ++   CKA+ +  A  L    ++ G  +  ++ 
Sbjct: 616 NNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASY 675

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
            +++ G        EA+K+  ++R
Sbjct: 676 NSLIKGFYKRKKFEEARKLFEEMR 699



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 170/321 (52%), Gaps = 2/321 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+A ++ +A  +  + +  G+ PD VTY  LID YC+       +++ N+M E G++P+V
Sbjct: 403 CQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV 462

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY +L+ G  +   +  + +LL EM E G+ P+V +YN+L++ L ++G  ++A ++ ++
Sbjct: 463 VTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEE 522

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M      P T T+  +++  CK      A  + R +   G  P +VT+N+L+ G C +G 
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           L     ++K + D G  PNA T+ ++MK  C RN   +  +EI   M  +G   D   Y 
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN-NMRATIEIYKGMHAQGVVPDTNTYN 641

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K   +KEA    ++MV  G  L   SYN+LI  + K  K E A  L +EM   
Sbjct: 642 ILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701

Query: 317 GFECDKYTHTILIDGLCKAGN 337
           GF  +K  + I +D   + GN
Sbjct: 702 GFIAEKEIYDIFVDVNYEEGN 722



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 166/345 (48%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  ++PD VTY  +I   CQ         + + M   G+ PD VTY +LI G  +   + 
Sbjct: 385 RKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMK 444

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L ++M+E G+ P+V +Y +L+  L + G+ D AN +  +M    L P   T+N ++
Sbjct: 445 EAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALI 504

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NGLCK    + A+++   +   GF P+ +TY  ++   CK G +  A  +L+ + D G  
Sbjct: 505 NGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQ 564

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P  +T+  +M     +   + G  ++  M  KG   +   + +++  +     ++   + 
Sbjct: 565 PTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEI 624

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M   GV  D  +YN LI  +CK   ++ A+ L  EM ++GF     ++  LI G  K
Sbjct: 625 YKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYK 684

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
               + AR   E M   GF +  E Y+  VD   ++G  ++ + +
Sbjct: 685 RKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 148/296 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  +++A ++    +  G+ P+VVTY  L+D  C+    D    +L+ M E G+ P+
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYN+LI G  +   +  ++ L++EM   G  PD  +Y ++M    ++G+  +A+ + +
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR 556

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L P   TFN+++NG C +   ++  R+ + +   G +P   T+N L+K  C   
Sbjct: 557 IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +R    I K +   G  P+  TY  ++K   + R  K    +   M  KG++     Y 
Sbjct: 617 NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           ++I  F K  + +EA    E+M T G   +   Y+  +++  +EG  E    L DE
Sbjct: 677 SLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 7/344 (2%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY--TDNALRMFRG 172
           ++     L + G   EA ++F  ++   +     + N+ L  L  N +     A R+FR 
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLS-NSFDGIRTAFRVFRE 242

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
             + G     V+YNI++  LC+ G+++ A  +L ++   G+ P+ ++Y+ I+    +  +
Sbjct: 243 YSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L+++  ++RKG   + + Y ++I+   K GR+ EA   +  M    +  D V Y T
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           LI+ + K G +   Y L DEM+++    D  T+T +I GLC+AG +  AR     M   G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
              +   Y  ++D   K G++  A ++   M  K    +  TY+++V  LCK   +  A+
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +LL    + G++       A+++GL   G   +A K+  ++ +A
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 213/444 (47%), Gaps = 4/444 (0%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +   C+  R+++A  +++     G  PDV++Y+ +++ YC+F   D  + ++  M+ 
Sbjct: 693  NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G+ P+   Y S+I    R   L+ + +   EM+  GI PD   Y +L+    + G    
Sbjct: 753  KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A++ F +M   D+TP   T+  +++G C+      A ++F  +   G  P+ VT+  LI 
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            G CKAG ++ A  +   +  +G +PN +TYTT++    +        E+L  M + G   
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
            + F Y +++    K G ++EA   + +    G+  D V+Y TL++ YCK G+++ A  +L
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 311  DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             EM  +G +    T  +L++G C  G ++     L +M   G   N   +N +V +    
Sbjct: 993  KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052

Query: 371  GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
              +  A  +++ M  +    D  TY ++V   CKA+ +  A  L       G  +  S  
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112

Query: 427  KAVVDGLRHSGCRREAKKIQSKIR 450
              ++ G        EA+++  ++R
Sbjct: 1113 SVLIKGFLKRKKFLEAREVFDQMR 1136



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 6/400 (1%)

Query: 26   AEAIII--DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
            A AII+  +   +GV  +V +YN++I   CQ       + +L  M   G +PDV++Y+++
Sbjct: 671  ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730

Query: 84   IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
            + G  R   L     L++ M   G+ P+ + Y S++  L ++ K  EA   F +MI   +
Sbjct: 731  VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790

Query: 144  TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
             P T  +  +++G CK      A + F  +      P+++TY  +I G C+ G +  A  
Sbjct: 791  LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850

Query: 204  ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
            +  E+   G  P+++T+T ++    +    K    + + M + G + +   Y T+I    
Sbjct: 851  LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910

Query: 264  KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
            K G L  A + + +M   G+Q +I +YN+++N  CK G +E A  L+ E E  G   D  
Sbjct: 911  KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 970

Query: 324  THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            T+T L+D  CK+G +  A+  L+ M   G    +  +N +++     G ++    +   M
Sbjct: 971  TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030

Query: 384  EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              K    ++ T++S+V   C    L +A+ +       GV
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 1070



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 35/401 (8%)

Query: 18   CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
            C+  +L +AE    + IR G+LPD V Y  LID +C+     A       M    I+PDV
Sbjct: 770  CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 829

Query: 78   VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            +TY ++I+G  +   +  +  L  EM   G+ PD  ++  L++   + G   +A RV   
Sbjct: 830  LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 889

Query: 138  MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
            MI    +P   T+  +++GLCK    D+A  +   + K G  P + TYN ++ GLCK+G 
Sbjct: 890  MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949

Query: 198  LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDG 252
            +  A  ++ E   +G   + +TYTT+M    ++ +     EIL  M  KG      TF+ 
Sbjct: 950  IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009

Query: 253  F--GYC------------------------TVIAAFVKI----GRLKEATDYMEQMVTDG 282
               G+C                        T   + VK       LK AT   + M + G
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069

Query: 283  VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            V  D  +Y  L+  +CK   ++ A+ L  EM+ +GF     T+++LI G  K      AR
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 1129

Query: 343  LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
               + M + G  ++ E ++   D   K  + D  ++  + +
Sbjct: 1130 EVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 44/382 (11%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY-T 163
           + G  P V  ++     L   G   EA RVF+ M+   L     + N+ L  L K+ Y T
Sbjct: 613 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 670

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A+ +FR   + G    + +YNI+I  +C+ GR++ A  +L  +   G+ P+ I+Y+T+
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    R  +     +++  MKRKG   + + Y ++I    +I +L EA +   +M+  G+
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK---------------------------- 315
             D V Y TLI+ +CK G + AA     EM                              
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850

Query: 316 -------QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
                  +G E D  T T LI+G CKAG++K A R+H  +M + G   N+  Y  ++D L
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGL 909

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+G +D A  +   M       + FTY+S+V+ LCK+  +  A KL+     +G+    
Sbjct: 910 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                ++D    SG   +A++I
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEI 991



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 53/120 (44%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             N  V  +C  N L+ A AI  D    GV PD  TY  L+  +C+  +    + +   M+
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              G S  V TY+ LI G  +      + ++ D+M   G+  D   ++      ++  +PD
Sbjct: 1102 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 1161


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 202/441 (45%), Gaps = 39/441 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  V  +CK   + +AE  +   ++ G+  D  TY  LI  YC+  + DA   I   M 
Sbjct: 207 LNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMP 266

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   + V+Y +LI G      +  +L L  +M E    P V +Y  ++  L QLG+  
Sbjct: 267 NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKT 326

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F++M      P   T+ +++  LC++   D+A ++  G+ + G +P +VTYN LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGL---------- 237
            G CK G   +A  IL  +  +  +PNA TY  ++   C  +N    + L          
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 238 -----------------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                                  ++LS M   G   D + Y   I    K G ++EA   
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E +   G++ + V Y+TLI+ YCK GK+     LLD+M   G   +  T+  LIDG CK
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
             N K ARL ++ M K   +   + Y  ++D L KD + D A ++F+ M       D F 
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626

Query: 391 YSSMVHNLCKAKRLPSASKLL 411
           Y++ +H  C   RL  A  L+
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLI 647



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 184/357 (51%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +C+ C+ +  + A+ I+   +  G++P VVTYN LID YC+     +   IL+ M   
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
             SP+  TYN LI G  R   +  ++ LL +MLE  + P+V +YN L+H   + G    A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++   M    L P   T+++ ++ LCK    + A  +F  L++ G     V Y+ LI G
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CK G++   R++L ++  +G  PN+ITY +++    + + +K    ++  M ++     
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I   +K     +A D  +QM++ G   D+  Y   I+ YC  G+L+ A +L+ 
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 648

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +M  +G   D   +T+ ID   + G+I GA   L+ M+++G + +   Y+C++  L 
Sbjct: 649 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS 705



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 213/434 (49%), Gaps = 4/434 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+ R  N+ +    +   +++ +++ ++ +   V P++ T N +++ YC+  +      
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL 225

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            ++++ +AG+S D  TY SLI G  RN  +  +  +   M   G   +  SY +L+H   
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + DEA ++F  M   +  P   T+ +++  LC+      AL MF+ + +    P + 
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +LI  LC+      A+ IL  + + G  P+ +TY  ++    +       LEILS M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +    + +   Y  +I  F +   + +A   + +M+   +Q ++V+YN LI+  CKEG L
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            +AY LL  M + G   D++T+++ ID LCK G ++ AR   E + + G  +N   Y+ +
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K GK+     + + M     V +S TY+S++   CK K    A  L+   +K  +
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 420 RILKSAQKAVVDGL 433
                    ++D L
Sbjct: 586 EPAADTYTILIDNL 599



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 192/425 (45%), Gaps = 39/425 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+A R+++A  +          P V TY ++I A CQ         +   M E    P+
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI     +S    +  +L+ MLE G+ P V +YN+L+    + G    A  +  
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILS 403

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   + +P   T+N ++ G C+ +    A+ +   + +    P +VTYNILI G CK G
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L +A  +L  + +SG  P+  TY+  +    +    +    +  ++K KG   +   Y 
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + K+G++ +    +++M++ G   + ++YN+LI+ YCKE   + A LL+D M K+
Sbjct: 524 TLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583

Query: 317 GFECDKYTHTILIDGL-----------------------------------CKAGNIKGA 341
             E    T+TILID L                                   C  G +K A
Sbjct: 584 DIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA 643

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHN 397
            + +  MN  G   +   Y   +D  G+ G ID A  + + M EV      +TYS ++ +
Sbjct: 644 EVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKH 703

Query: 398 LCKAK 402
           L  AK
Sbjct: 704 LSNAK 708



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 168/406 (41%), Gaps = 37/406 (9%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  N  +  FC+   + KA +++   +   + P+VVTYN+LI   C+     + Y +L
Sbjct: 413 NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL 472

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M E+G+ PD  TY+  I    +  L+  +  L + + E GI  +   Y++L+    ++
Sbjct: 473 SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKV 532

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  +   +   M+     P + T+N +++G CK +    A  +   + K    P   TY
Sbjct: 533 GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI  L K      A  +  ++  +G  P+   YT                        
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAF---------------------- 630

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                        I A+   GRLK+A   + +M   G+  D + Y   I+ Y + G ++ 
Sbjct: 631 -------------IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDG 677

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+ +L  M + G E   YT++ LI  L  A   + +          G  SN +  NC   
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASN-DFSNCW-R 735

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           R+  +  +D    + E     ++ TY   +  LCK   L  A +L 
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLF 781



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 144/340 (42%), Gaps = 4/340 (1%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           YN L+  L +    DE   V+ +M+   +TP   T N M+NG CK      A      + 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           + G   +  TY  LI G C+   +  A  I   + + G   N ++YT ++      R+  
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             L++ S M           Y  +I A  ++GR  EA +  ++M     Q ++ +Y  LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
              C++   + A  +L+ M ++G      T+  LIDG CK G    A   L  M      
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            N   YN ++    +   I  A+++   M  +    +  TY+ ++H  CK   L SA KL
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           L    +SG+   +      +D L   G   EA+ +   ++
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 170/415 (40%), Gaps = 32/415 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   L  A  ++      G++PD  TY++ ID  C+    +   ++   ++E
Sbjct: 453 NILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE 512

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  + V Y++LI G  +   +S    LLD+ML  G  P+  +YNSL+    +     E
Sbjct: 513 KGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKE 572

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   MI  D+ P   T+ I+++ L K+   D A  MF  +   G  P++  Y   I 
Sbjct: 573 ARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIH 632

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C  GRL+ A  ++ ++   G  P+ + YT  +    R         IL  M   G   
Sbjct: 633 AYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692

Query: 251 DGFGYCTVIAAFVKIGRLKEAT------------------------------DYMEQMVT 280
             + Y  +I       + KE +                              D   +M  
Sbjct: 693 SYYTYSCLIKHLSN-AKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAE 751

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   +  +Y   I   CK G LE A+ L D M+++G   ++  +  L+   C+ G    
Sbjct: 752 HGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGE 811

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
           A   L+ M +     +L++   ++  L  +G  + A  VF S  ++  + Y  MV
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSF-LQCEYNYDEMV 865



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 157/390 (40%), Gaps = 64/390 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ + T CK   +E+A ++       G+  + V Y+ LID YC+      G  +L++M  
Sbjct: 488 SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ +TYNSLI G  +      +  L+D M++  I P   +Y  L+  L +  + D+
Sbjct: 548 AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ 607

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F  M+     P    +   ++  C +    +A  +   +   G +P+ + Y + I 
Sbjct: 608 AHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFID 667

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC------------------------ 226
              + G +  A  ILK + + G  P+  TY+ ++K                         
Sbjct: 668 AYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVAS 727

Query: 227 -----CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                C+R   Y+  L++   M   G   +   Y   I    K+G L+ A    + M   
Sbjct: 728 NDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEK 787

Query: 282 GVQLDIVSYNTLINLYCKEG-------------------KLEAAYLLL--------DEME 314
           G   +   YN+L+   C+ G                    L++  LLL        DE  
Sbjct: 788 GQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKA 847

Query: 315 KQGF----EC----DKYTHTILIDGLCKAG 336
           K+ F    +C    D+    +LIDGL K G
Sbjct: 848 KRVFCSFLQCEYNYDEMVWKVLIDGLLKKG 877



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 120/318 (37%), Gaps = 43/318 (13%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            +C   RL+ AE +I      G++PD + Y + IDAY +F S D  + IL RM E G  P
Sbjct: 633 AYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
              TY+ LI                 + L    P +V S + L      +   D +N   
Sbjct: 693 SYYTYSCLI-----------------KHLSNAKPKEVSSSSELSDLSSGVASNDFSN--- 732

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYT-DNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
                                 C  R   +  L +F  + +HG  P   TY   I GLCK
Sbjct: 733 ----------------------CWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCK 770

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G L  A  +   + + G +PN   Y +++ C  +   Y   +  L  M    +      
Sbjct: 771 VGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDS 830

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
              ++      G  ++A       +      D + +  LI+   K+G  +    L   ME
Sbjct: 831 CKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIME 890

Query: 315 KQGFECDKYTHTILIDGL 332
            QG +    T+++LI+G 
Sbjct: 891 TQGCQIHPKTYSMLIEGF 908


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 208/406 (51%), Gaps = 4/406 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  R+E+A  +    +R GVLPDVVT + L+D  C+   F   Y +   M + G++P+
Sbjct: 269 YCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPN 328

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY + I    +   ++ SL LL EM+  G+  D+  Y ++M  L + GK +EA  V +
Sbjct: 329 HVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLR 388

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
             +  ++TP   T+ ++++  C+    D A +M   +++    P +VT++ ++ GL K G
Sbjct: 389 HALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRG 448

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A   ++++ DSG APN +TY T++   F+ +  +  L++   M  +G   + F   
Sbjct: 449 CIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVD 508

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +++    K G ++EA    + M   G+ LD V+Y TL++   K G + AA  +  E+ ++
Sbjct: 509 SLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMER 568

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   + + I+ LC+ G    A+  L+ M   G + +   YN ++    ++G    A
Sbjct: 569 NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA 628

Query: 377 INVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           + +   M+   +K +  TY+++V  L +A  +  A  LL     +G
Sbjct: 629 LKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 198/435 (45%), Gaps = 39/435 (8%)

Query: 37  GVLPDVVTYNMLIDAY--CQ---------------------FV------------SFDAG 61
           G+ P+VVTY  LID +  CQ                     F+            + +  
Sbjct: 464 GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA 523

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +   M E G+  D V Y +L+ G  +   +  +L +  E++E  + PD   YN  ++C
Sbjct: 524 EALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINC 583

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L +LGK  EA    ++M    L P  AT+N M++  C+   T  AL++   ++     P 
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TY  L+ GL +AG +  A+++L E+  +G  P  +TY  +++ C  +R   + LE+  
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHE 703

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D   Y T++      G  ++AT  +++M+  G+  D +++N LI  +CK  
Sbjct: 704 LMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSS 763

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A+    +M  QG   +  T   L+ GL  AG I  A   +  M K+G + N   Y+
Sbjct: 764 HLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYD 823

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +V    K      A+ ++  M  K     + TY+S++ +  KA  +  A +L     + 
Sbjct: 824 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRR 883

Query: 418 GVRILKSAQKAVVDG 432
           GV    S    +++G
Sbjct: 884 GVLHTSSTYDILLNG 898



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 185/377 (49%), Gaps = 4/377 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV +N+LI G  +   ++ +L +++ M   G+  DV  YN+L+   F  G  D A  V +
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T   ++   CK +  + A  ++ G+ + G +P++VT + L+ GLC+ G
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDG 308

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  + +E+   G APN +TY T +    + ++    L +L  M  +G   D   Y 
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           TV+    K G+++EA D +   ++D +  + V+Y  L++ +C+ G ++ A  +L +ME++
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               +  T + +++GL K G I  A  ++  M   G   N+  Y  ++D   K    + A
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           ++V+  M  +    ++F   S+V+ L K   +  A  L     + G+ +       ++DG
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548

Query: 433 LRHSGCRREAKKIQSKI 449
           L  +G    A K+  ++
Sbjct: 549 LFKTGNMPAALKVGQEL 565



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 211/448 (47%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   +  A A++      G+  DVV YN L+  +      DA + +  RM+ 
Sbjct: 193 NALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKA 252

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P VVT+ +LI    +   +  +  L + M+  G+ PDV + ++L+  L + G+  E
Sbjct: 253 DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSE 312

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M    + P   T+   ++ L K +  + +L +   +   G   +LV Y  ++ 
Sbjct: 313 AYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD 372

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K G++  A+ +L+        PN +TYT ++    R        ++L  M+ K  + 
Sbjct: 373 RLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSP 432

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + +++   VK G + +A  YM +M   G+  ++V+Y TLI+ + K    EAA  + 
Sbjct: 433 NVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVY 492

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G E + +    L++GL K GNI+ A    + M + G   +   Y  ++D L K 
Sbjct: 493 RDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKT 552

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  A+ V + +  +    D+  Y+  ++ LC+  +   A   L     +G+   ++  
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             ++      G   +A K+ ++++ + I
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSI 640



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 35/376 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+  +  +A++ + +    G+ PD  TYN +I A C+  +      +LN M+ 
Sbjct: 578 NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKW 637

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-------------------- 110
           + I P+++TY +L+ G     ++  +  LL+EM   G  P                    
Sbjct: 638 SSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYV 697

Query: 111 ---------------DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                          D+  YN+L+H L   G   +A  V  +M+   + P T TFN ++ 
Sbjct: 698 ILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALIL 757

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+ + DNA   +  +   G  P + T+N L+ GL  AGR+  A  ++ E+   G  P
Sbjct: 758 GHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEP 817

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  ++    +       L +   M  KG+      Y ++I+ F K G + +A +  
Sbjct: 818 NNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELF 877

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M   GV     +Y+ L+N + K        +LL +M++ GF+  K T + +     K 
Sbjct: 878 SEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKP 937

Query: 336 GNIKGARLHLEYMNKI 351
           G    AR  L+ + K+
Sbjct: 938 GMTWEARRLLKTLFKV 953



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 194/450 (43%), Gaps = 47/450 (10%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           D +T N +I +YC   +     ++L      +  ++ D V+YN  +AG +       +  
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPP 138

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG----------------- 141
           +L EM + G+P D  + ++ +  L + G   EA  + + ++ G                 
Sbjct: 139 VLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDG 198

Query: 142 -----DLTPCTAT---------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
                D+    A                +N ++ G   +   D A  +   ++  G  P 
Sbjct: 199 YCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPS 258

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VT+  LI   CK  R+  A  + + +  SG  P+ +T + ++    R+ ++     +  
Sbjct: 259 VVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFR 318

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M + G   +   YCT I +  K+ R+ E+   + +MV+ GV +D+V Y T+++   KEG
Sbjct: 319 EMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEG 378

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+E A  +L          +  T+T+L+D  C+AGNI GA   L  M +     N+  ++
Sbjct: 379 KIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFS 438

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSASKLLLSCL 415
            I++ L K G I  A      M  KDS       TY +++    K +   +A  +    L
Sbjct: 439 SILNGLVKRGCIAKAAGYMRKM--KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDML 496

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             GV        ++V+GLR +G   EA+ +
Sbjct: 497 HEGVEANNFIVDSLVNGLRKNGNIEEAEAL 526



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 148/330 (44%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD V YN+ I+  C+   F    + L  MR  G+ PD  TYN++I+   R    S +L L
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM    I P++ +Y +L+  L + G  ++A  +  +M     TP   T+  +L     
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSG 691

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +R     L +   +   G   ++  YN L+  LC  G  R A  +L E+   G AP+ IT
Sbjct: 692 SRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTIT 751

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    ++          + M  +G + +   + T++      GR+ EA   + +M 
Sbjct: 752 FNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMK 811

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G++ + ++Y+ L+  Y K+     A  L  EM  +GF     T+  LI    KAG + 
Sbjct: 812 KMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMN 871

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            A+     M + G       Y+ +++   K
Sbjct: 872 QAKELFSEMKRRGVLHTSSTYDILLNGWSK 901



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 97/202 (48%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   CK++ L+ A A     +  G+ P++ T+N L+             T++ 
Sbjct: 749 TITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVIC 808

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M++ G+ P+ +TY+ L+ G  + S    +L L  EM+  G  P   +YNSL+    + G
Sbjct: 809 EMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAG 868

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             ++A  +F +M    +   ++T++I+LNG  K R       + + +++ GF P   T +
Sbjct: 869 MMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTIS 928

Query: 187 ILIKGLCKAGRLRTARWILKEL 208
            + +   K G    AR +LK L
Sbjct: 929 SMSRAFSKPGMTWEARRLLKTL 950


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 217/473 (45%), Gaps = 71/473 (15%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C  N ++ A A++ D  R G +P+ + Y  LI A  +    +    +L  M   G  PD
Sbjct: 227 LCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPD 286

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA----N 132
           V T+N  I G  +   +  +  L+D ML  G  P+ ++Y  LMH L ++GK DEA    N
Sbjct: 287 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 346

Query: 133 RV-------FQDMICGDLT---------------------PCTATFNIMLNGLCKNRYTD 164
           +V       F  +I G ++                     P   T+N ++ GLCK  Y  
Sbjct: 347 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 406

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           +A  +   +Q  G  P ++TY ILI   CK GRL  AR +L E+   G A NA+ Y  ++
Sbjct: 407 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466

Query: 225 KCCFRNRKYKLGLEILSAMKRKG-----YTFDG--FGYC--------------------- 256
               ++ K +  L +   M  KG     +TF+   FG C                     
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526

Query: 257 -------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                  T+I AF++ G ++EA   +  M+  G  LD ++YN LI   C+ G +E    L
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            ++M  +G   +  +  ILI+GLC+ GNI+ A   L  M   G   ++  YN +++ L K
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            G+   A+N+F+ ++V+    D+ TY++++   CK      A  LL   + SG
Sbjct: 647 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 196/415 (47%), Gaps = 52/415 (12%)

Query: 40  PDVVTYNMLIDAY----CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           P   +YN+++D      C  V  +  Y +L++    GISP V T+  ++      + +  
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSK----GISPTVYTFGVVMKALCLVNEVDS 235

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  LL +M   G  P+   Y +L+H L ++G+ +E  ++ ++M+     P   TFN  ++
Sbjct: 236 ACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 295

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK      A ++   +   GF P   TY +L+ GLC+ G++  AR +L ++ +    P
Sbjct: 296 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----P 351

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + + T+                                   I  +V  GRL EA   M
Sbjct: 352 NVVLFNTL-----------------------------------INGYVSRGRLDEAKAVM 376

Query: 276 -EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E M++ G   DI +YNTLI   CK+G L +A  L++EM+ +G E +  T+TILID  CK
Sbjct: 377 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 436

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G ++ AR  L+ M+  G   N   YNC++  L KD K+  A+N+F  M  K    D FT
Sbjct: 437 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 496

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++S++  LCK  +   A  L    L  GV         ++      G  +EA K+
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 551



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 169/327 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L  A  ++ +    G  P+V+TY +LID +C+    +    +L+ M  
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ + V YN LI+   ++  +  +L++  +M   G  PD++++NSL+  L ++ K +E
Sbjct: 453 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 512

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++QDM+   +   T T+N +++   +      AL++   +   G   + +TYN LIK
Sbjct: 513 ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 572

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+AG +     + +++   G  PN I+   ++    R    +  LE L  M  +G T 
Sbjct: 573 ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTP 632

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I    K GR +EA +  +++  +G+  D ++YNTLI+ +CKEG  + A+LLL
Sbjct: 633 DIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLL 692

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGN 337
                 GF  ++ T  IL+    K G+
Sbjct: 693 SRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 1/364 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDG-IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           L N  +  +    RL++A+A++ +  + +G  PD+ TYN LI   C+     +   ++N 
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G  P+V+TY  LI    +   L  + ++LDEM   G+  +   YN L+  L +  K
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A  +F DM      P   TFN ++ GLCK    + AL +++ +   G +   +TYN 
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI    + G ++ A  ++ ++   G   + ITY  ++K   R    + GL +   M  KG
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +      +I    + G ++ A +++  M+  G+  DIV+YN+LIN  CK G+ + A 
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L D+++ +G   D  T+  LI   CK G    A L L      GF  N   +  +V   
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714

Query: 368 GKDG 371
            K+G
Sbjct: 715 IKEG 718



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 200/446 (44%), Gaps = 71/446 (15%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P V T+ +++ A C     D+   +L  M   G  P+ + Y +LI    +   ++  
Sbjct: 212 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEV 271

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L LL+EML MG  PDV ++N  +H L ++ +  EA ++   M+    TP + T+ ++++G
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 331

Query: 157 LCKNRYTDNALRMFRGLQK----------HGFV----------------------PELVT 184
           LC+    D A  +   +            +G+V                      P++ T
Sbjct: 332 LCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 391

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-------------------- 224
           YN LI GLCK G L +AR ++ E+   G  PN ITYT ++                    
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451

Query: 225 -----------KCCF----RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
                       C      ++ K +  L +   M  KG   D F + ++I    K+ + +
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA    + M+ +GV  + ++YNTLI+ + + G ++ A  L+++M  +G   D  T+  LI
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 385
             LC+AGNI+      E M   G + N  + N +++ L + G I HA+     M      
Sbjct: 572 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 631

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLL 411
            D  TY+S+++ LCK  R   A  L 
Sbjct: 632 PDIVTYNSLINGLCKTGRAQEALNLF 657



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 9/218 (4%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---QLDIVSYNTLIN 295
           +L  MK++G  F    +  ++  + + G   +AT  +  M   GV   +    SYN +++
Sbjct: 133 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFRSYNVVLD 190

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
           +       +    +  EM  +G     YT  +++  LC    +  A   L+ M + G   
Sbjct: 191 VLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVP 250

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N   Y  ++  L K G+++  + + E M     + D  T++  +H LCK  R+  A+KL+
Sbjct: 251 NAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLV 310

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              L  G          ++ GL   G   EA+ + +K+
Sbjct: 311 DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 1/240 (0%)

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNR 231
           +++ G V     + +++K   +AG    A R +L   G     P   +Y  ++       
Sbjct: 137 MKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGN 196

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
             K+   +   M  KG +   + +  V+ A   +  +  A   ++ M   G   + + Y 
Sbjct: 197 CPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQ 256

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           TLI+   K G++     LL+EM   G   D  T    I GLCK   I  A   ++ M   
Sbjct: 257 TLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR 316

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           GF  N   Y  ++  L + GK+D A  +   +   +   ++++++      RL  A  ++
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVM 376


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 182/384 (47%), Gaps = 31/384 (8%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV TY+  ++A+C+   FDA   +   MR    + + VTYN +I+G  R+  +  +
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               +EM++ G+ PD ++Y +LM+ L + G+  EA  +  +M C  L P    +  +++G
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K      A  +   +   G  P  + Y+ LI+GLCK G+L  A  +L E+   GH P+
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  +M+  F++       E+L+ M+  G   + + Y  +I    + G  KEA + +E
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+++G++ +   Y  LI  + KEG +  A   L+ M K     D + +  LI GL   G
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 396
            I+ A  +   + K G                                V D FTYS ++H
Sbjct: 540 RIEEAEEYYAQVQKRGL-------------------------------VPDEFTYSGLIH 568

Query: 397 NLCKAKRLPSASKLLLSCLKSGVR 420
             CK + L  A +LL   L SG++
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLK 592



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 212/443 (47%), Gaps = 4/443 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C++  +E+A     + +  G+ PD  TY  L++  C+         +L+ M  
Sbjct: 284 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC 343

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+ P+VV Y +L+ G  +    + + D+L+EM+  G+ P+   Y++L+  L ++G+   
Sbjct: 344 SGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGR 403

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++  +MI     P T T++ ++ G  ++   D A  +   ++  G +P   TY I+I 
Sbjct: 404 ASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMIN 463

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G  + A  +L+E+   G  PNA  Y  ++    +     L  E L  M +     
Sbjct: 464 GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLP 523

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I     +GR++EA +Y  Q+   G+  D  +Y+ LI+ YCK   LE A  LL
Sbjct: 524 DLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL 583

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G + +  T+T L++G  K+ + +     L+ M   G   +   Y  ++  L + 
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 643

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             ++ A  V   +E    V D   YSS++  LCK   +  A  LL    K G+       
Sbjct: 644 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCY 703

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++DG   SG    A+ +   I
Sbjct: 704 NALIDGFCRSGDISRARNVFDSI 726



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 216/470 (45%), Gaps = 44/470 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RL++A+A++ +    G+ P+VV Y  L+D + +       + ILN M  AG+ P+
Sbjct: 325 LCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPN 384

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            + Y++LI G  +   L  +  LL+EM+++G  PD ++Y+ LM   FQ    D A  +  
Sbjct: 385 KIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLN 444

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR-----GLQKHGF------------- 178
           +M    + P   T+ IM+NGLC+N  +  A  +       GL+ + F             
Sbjct: 445 EMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 504

Query: 179 -----------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
                            +P+L  YN LIKGL   GR+  A     ++   G  P+  TY+
Sbjct: 505 HISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYS 564

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    + R  +   ++L  M   G   +   Y  ++  + K    ++ +  ++ M+  
Sbjct: 565 GLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS 624

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + D   Y  +I    +   +E A+++L E+EK G   D + ++ LI GLCK  +++ A
Sbjct: 625 GDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKA 684

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              L+ M K G +  +  YN ++D   + G I  A NVF+S+  K    +  TY++++  
Sbjct: 685 VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDG 744

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
            CK   +  A  L    L  G+     A  A V  +  +GC   A   Q+
Sbjct: 745 NCKNGDITDAFDLYKDMLDRGI-----APDAFVYNVLATGCSDAADLEQA 789



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 222/480 (46%), Gaps = 42/480 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +L +A  ++ + I++G  PD  TY+ L+  + Q    D  + +LN MR +GI P+
Sbjct: 395 LCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPN 454

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  +I G  +N     + +LL+EM+  G+ P+ + Y  L+    + G    A    +
Sbjct: 455 AYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLE 514

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   ++ P    +N ++ GL      + A   +  +QK G VP+  TY+ LI G CK  
Sbjct: 515 NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR 574

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  +L+++ +SG  PNA TYT +++  F++  ++    IL +M   G   D   Y 
Sbjct: 575 NLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYG 634

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            VI    +   ++ A   + ++  +G+  D+  Y++LI+  CK   +E A  LLDEM K+
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E     +  LIDG C++G+I  AR   + +   G   N   Y  ++D   K+G I  A
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754

Query: 377 INVFESME----VKDSFTY----------------------------------SSMVHNL 398
            ++++ M       D+F Y                                  S++V   
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGF 814

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           CK  RL    KLL   +     I+ +AQ  + V+     +G   EA ++ ++++  K S 
Sbjct: 815 CKRGRLQETEKLLHVMMDR--EIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQ 872



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 157/376 (41%), Gaps = 44/376 (11%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           R+E+AE       + G++PD  TY+ LI  YC+  + +    +L +M  +G+ P+  TY 
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            L+ G  +++       +L  ML  G  PD   Y  ++  L +    + A  V  ++   
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            L P    ++ +++GLCK    + A+ +   + K G  P +V YN LI G C++G +  A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
           R +   +   G  PN +TYT ++                             G C     
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALID----------------------------GNC----- 746

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             K G + +A D  + M+  G+  D   YN L         LE A  L +EM  +G    
Sbjct: 747 --KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG---- 800

Query: 322 KYTH----TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            Y H    + L+ G CK G ++     L  M       N +    ++   GK GK+  A 
Sbjct: 801 -YAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAH 859

Query: 378 NVFESMEVKDSFTYSS 393
            VF  ++ K +   S+
Sbjct: 860 RVFAELQQKKASQSST 875



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 6/304 (1%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           TA  +++++   KN     A ++   +   G  P     N L+K L +A  +    W LK
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELV-WKLK 233

Query: 207 ELGD-SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
              + +G  P+  TY+T ++   + R +    ++   M+R+    +   Y  +I+   + 
Sbjct: 234 GFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 293

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G ++EA  + E+MV  G+  D  +Y  L+N  CK G+L+ A  LLDEM   G + +   +
Sbjct: 294 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVY 353

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-- 383
             L+DG  K G    A   L  M   G   N   Y+ ++  L K G++  A  +   M  
Sbjct: 354 ATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK 413

Query: 384 --EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
                D+FTY  ++    +      A +LL     SG+         +++GL  +G  +E
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKE 473

Query: 442 AKKI 445
           A  +
Sbjct: 474 AGNL 477



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 1/221 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K    +  I +    ++  +E A  ++ +  + G++PD+  Y+ LI   C+    +    
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M + G+ P +V YN+LI G  R+  +S + ++ D +L  G+ P+  +Y +L+    
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   +A  +++DM+   + P    +N++  G       + AL +   +   G+   + 
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVS 805

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            ++ L++G CK GRL+    +L  + D    PNA T   ++
Sbjct: 806 LFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 70/272 (25%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++L+    K G +RTA  ++  +GD G AP       ++K   R    +L        K 
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMEL------VWKL 232

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG+                             M   G+  D+ +Y+T +  +CK    +A
Sbjct: 233 KGF-----------------------------MEGAGIPPDVYTYSTFLEAHCKARDFDA 263

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  + +EM ++    ++ T+ ++I GLC++G ++ A          GF            
Sbjct: 264 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA---------FGF------------ 302

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGVRILK 423
              K+  +D+ ++        D+FTY ++++ LCK  RL  A  LL  +SC  SG++   
Sbjct: 303 ---KEEMVDYGLS-------PDAFTYGALMNGLCKGGRLKEAKALLDEMSC--SGLKPNV 350

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                +VDG    G   EA  I +++  A + 
Sbjct: 351 VVYATLVDGFMKEGKAAEAFDILNEMISAGVQ 382


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 44/443 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA RL +AE +         +P    YN +I  Y     F+  Y +L R+RE G 
Sbjct: 25  IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 84

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV++NS++    +   +  +L L  E+++    P+  +YN ++  L   G+ +EA R
Sbjct: 85  IPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 143

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M    L P   T NIM++ LCK R  + A ++F    + G  P+ VTY  LI GL 
Sbjct: 144 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 203

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYT-------------------------------- 221
           K G++  A  + +++ D+GH  N + YT                                
Sbjct: 204 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 263

Query: 222 ---TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
              T M C F+  + + G  I   ++  G+  D   Y  +I    K G+ +E ++    M
Sbjct: 264 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 323

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G  LD  +YN +++ +CK GK+  AY +L+EM+++  +    T+  ++DGL K   +
Sbjct: 324 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 383

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E     G + N+  Y+ ++D  GK G+ID A  + E M  K    + +T++S+
Sbjct: 384 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 443

Query: 395 VHNLCKAKRLPSASKLLLSCLKS 417
           +  L KA+ +  A    L C +S
Sbjct: 444 LDALVKAEEINEA----LVCFQS 462



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 196/402 (48%), Gaps = 4/402 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +NI V   CKA +LE+A  I     + G  PD VTY  LID   +    D  Y +  +M 
Sbjct: 160 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 219

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +AG + + V Y SLI     +        +  E++  G  PD+   N+ M C+F+ G+ +
Sbjct: 220 DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 279

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +   +F+D+      P   +++I+++GL K         +F  +++ GF  +   YN ++
Sbjct: 280 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 339

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK+G++  A  IL+E+ +    P   TY  I+    +  +      +    K KG  
Sbjct: 340 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 399

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y ++I  F K+GR+ EA   +E+M+  G+  ++ ++N+L++   K  ++  A + 
Sbjct: 400 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 459

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M++     + YT++ILI+GLC+      A +  + M K G   N+  Y  ++  L K
Sbjct: 460 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 519

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
            G I  A ++FE  +    + D+ ++++++  +  A R   A
Sbjct: 520 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 206/431 (47%), Gaps = 39/431 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C   R+E+A  I+ +     + P+++T N+++D  C+    +  Y I     +
Sbjct: 126 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 185

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +PD VTY SLI G  +   +  +  L ++ML+ G   +   Y SL+   F  G+ ++
Sbjct: 186 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 245

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            +++F+++I     P     N  ++ + K    +    +F  ++ +GF+P++ +Y+ILI 
Sbjct: 246 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 305

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+ R                                       I  AMK++G+  
Sbjct: 306 GLTKAGQARETS-----------------------------------NIFHAMKQQGFAL 330

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  V+  F K G++ +A + +E+M    VQ  + +Y  +++   K  +L+ AY+L 
Sbjct: 331 DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF 390

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E + +G E +   ++ LIDG  K G I  A L LE M K G   N+  +N ++D L K 
Sbjct: 391 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 450

Query: 371 GKIDHAINVFESM-EVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +I+ A+  F+SM E+K   +++TYS +++ LC+ ++   A        K G+       
Sbjct: 451 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 510

Query: 427 KAVVDGLRHSG 437
             ++ GL   G
Sbjct: 511 TTMISGLAKVG 521



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 188/410 (45%), Gaps = 5/410 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD V+Y  +I   C+         +  +M      P    YN++I G         +
Sbjct: 13  GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             LL+ + E G  P V S+NS++ CL +  K DEA  +F+ M   D  P ++T+NI+++ 
Sbjct: 73  YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDM 131

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     + A R+   ++     P L+T NI++  LCKA +L  A  I +     G  P+
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY +++    +  +      +   M   G+  +   Y ++I  F   GR ++     +
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +++  G + D+   NT ++   K G++E   ++ +++   GF  D  +++ILI GL KAG
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
             +        M + GF  +  AYN +VD   K GK+  A  + E M+ K       TY 
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           ++V  L K  RL  A  L       G+ +      +++DG    G   EA
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 166/374 (44%), Gaps = 40/374 (10%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG-- 156
              E+   G+ PD  SY S++  L + G+  EA  +F  M      PC   +N M+ G  
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 157 ---------------------------------LCKNRYTDNALRMFRGLQKHGFVPELV 183
                                            L K R  D AL +F  ++K    P   
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSS 123

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYNI+I  LC  GR+  A  IL E+  +   PN +T   ++    + RK +   +I  + 
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            ++G   D   YC++I    K G++ EA    E+M+  G   + V Y +LI  +   G+ 
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E  + +  E+ ++G + D       +D + KAG ++  R+  E +   GF  ++ +Y+ +
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K G+     N+F +M+ +    D+  Y+++V   CK+ ++  A ++L    +  V
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 420 RILKSAQKAVVDGL 433
           +   +   A+VDGL
Sbjct: 364 QPTVATYGAIVDGL 377



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 118/221 (53%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R  N  V  FCK+ ++ KA  I+ +     V P V TY  ++D   +    D  Y +
Sbjct: 330 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 389

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +VV Y+SLI G  +   +  +  +L+EM++ G+ P+V+++NSL+  L +
Sbjct: 390 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 449

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M      P T T++I++NGLC+ +  + A   ++ +QK G VP +VT
Sbjct: 450 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 509

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL K G +  A  + +    +G  P+A ++  +++
Sbjct: 510 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 550



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 137/299 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LLN  +    KA  +EK   I  D    G LPDV +Y++LI    +         I + M
Sbjct: 264 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 323

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           ++ G + D   YN+++ G  ++  +  + ++L+EM E  + P V +Y +++  L ++ + 
Sbjct: 324 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 383

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA  +F++     +      ++ +++G  K    D A  +   + K G  P + T+N L
Sbjct: 384 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 443

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  L KA  +  A    + + +    PN  TY+ ++    R +KY         M+++G 
Sbjct: 444 LDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 503

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
             +   Y T+I+   K+G + +A    E+   +G   D  S+N LI       +   AY
Sbjct: 504 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 562



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 40/359 (11%)

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A + F ++    L P   ++  M+  LCK      A  +F  ++    VP    YN +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   AGR   A  +L+ L + G  P+ +++ +I+ C  + RK    L +   MK+     
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP- 120

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I      GR++EA   +++M    +  ++++ N +++  CK  KLE AY + 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY---------- 360
           +   ++G   D  T+  LIDGL K G +  A    E M   G ++N   Y          
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 361 -------------------------NCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
                                    N  +D + K G+++    +FE +     + D  +Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           S ++H L KA +    S +  +  + G  +   A  AVVDG   SG   +A +I  +++
Sbjct: 301 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 77/154 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+  L +  +  F K  R+++A  I+ + ++ G+ P+V T+N L+DA  +    +    
Sbjct: 399 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 458

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M+E    P+  TY+ LI G  R    + +     +M + G+ P+V +Y +++  L 
Sbjct: 459 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLA 518

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++G   +A  +F+        P  A+FN ++ G+
Sbjct: 519 KVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 206/422 (48%), Gaps = 4/422 (0%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D +  G+ P V TYN++I   C+        ++  +M++ G++PD+VTYN+LI G  +  
Sbjct: 122 DMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIG 181

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
           LL  S+ L +EM  MG  PDV +YN+L++   +      A   F++M   DL P   +++
Sbjct: 182 LLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYS 241

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++ LCK      A++ F  + + G +P   TY+ LI   CKAG L  A  +  E+   
Sbjct: 242 TLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE 301

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               N +TYTT++             E+  AM + G T +   Y  +I   +K+  + +A
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKA 361

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            +   +M    ++ DI+ + T++   C E KLE   +++ EM++ G   +   +T L+D 
Sbjct: 362 MELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDA 421

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD---- 387
             KAGN   A   LE M  +G +  +  +  ++D L K G +  AI  F  M   D    
Sbjct: 422 YFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPN 481

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              Y++++  LCK   +  A KL        +   K A  A++DG    G  +EA  +++
Sbjct: 482 VAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRN 541

Query: 448 KI 449
           K+
Sbjct: 542 KM 543



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 4/380 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +L  +      M +  + P   S N+ +H L + G+ D +   
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DM+   + P   T+NIM+  +CK      A  +F  ++K G  P++VTYN LI G  K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G L  +  + +E+   G  P+ ITY  ++    + +      E    MK K    +   
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I A  K G ++ A  +   M   G+  +  +Y++LI+  CK G L  A++L DEM 
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           ++  + +  T+T L+DGLC+ G +  A      M K G   NL+AY  ++    K   +D
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+ +F  M  K    D   + ++V  LC   +L     ++    +SG+         ++
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 431 DGLRHSGCRREAKKIQSKIR 450
           D    +G R EA  +  ++R
Sbjct: 420 DAYFKAGNRTEAINLLEEMR 439



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 177/373 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +FCK   + +A     +     + P+V++Y+ LIDA C+             M  
Sbjct: 206 NALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTR 265

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY+SLI    +   L  +  L DEML+  +  ++ +Y +L+  L + G  +E
Sbjct: 266 VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNE 325

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+ M    +TP    +  +++G  K R  D A+ +F  +++    P+++ +  ++ 
Sbjct: 326 AEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVW 385

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   +L   + I+ E+ +SG   N + YTT+M   F+       + +L  M+  G   
Sbjct: 386 GLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEV 445

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               +C +I    K G ++EA  Y  +M    +Q ++  Y  LI+  CK   +  A  L 
Sbjct: 446 TVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLF 505

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DEM+ +    DK  +T +IDG  K GN + A      M ++G + +L AY  +V  L + 
Sbjct: 506 DEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQC 565

Query: 371 GKIDHAINVFESM 383
           G++  A      M
Sbjct: 566 GQVQQARKFLAEM 578



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 194/452 (42%), Gaps = 41/452 (9%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +P    ++ L     +    +A      RM +  + P   + N+ +   ++      S D
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
              +M+  GI P V++YN ++  + + G    A  +F+ M    LTP   T+N +++G  
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    D ++ +F  ++  G  P+++TYN LI   CK   +  A    +E+ D    PN I
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           +Y+T++    +    ++ ++    M R G   + F Y ++I A  K G L EA    ++M
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID-------- 330
           + + V L+IV+Y TL++  C+EG +  A  L   M K G   +   +T LI         
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 331 ---------------------------GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
                                      GLC    ++  ++ +  M + G  +N   Y  +
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTL 418

Query: 364 VDRLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +D   K G    AIN+ E M     EV    T+ +++  LCK   +  A           
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVT-VVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++   +   A++DGL  + C  +AKK+  +++
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQ 509



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 144/314 (45%), Gaps = 5/314 (1%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LNI   T      C+   + +AE +     + GV P++  Y  LI  + +  S D    +
Sbjct: 305 LNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMEL 364

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            N MRE  I PD++ + +++ G    S L     ++ EM E GI  +   Y +LM   F+
Sbjct: 365 FNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFK 424

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   EA  + ++M          TF  +++GLCK      A+  F  +  H   P +  
Sbjct: 425 AGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAV 484

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCK   +  A+ +  E+ D    P+ I YT ++    ++  ++  L + + M 
Sbjct: 485 YTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMM 544

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D + Y +++    + G++++A  ++ +M+  G+  D      L+  + + G ++
Sbjct: 545 EMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNID 604

Query: 305 AAYLLLDEMEKQGF 318
            A  L +E+ ++G 
Sbjct: 605 EAIELQNELVEKGL 618


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 204/409 (49%), Gaps = 5/409 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R +  E ++++ +R+G  P+V T+N LI   C+   F+  +  L++M E G +PD
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  Y ++I G  ++     + D+L  M   G+ P+V  YN+++  L    + +EA  +  
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D      TFNI+++  C+N   D  + +   + +HG +P+++TY  +I G CK G
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +LK +   G  PN I+YT ++K   R  ++    E++S M ++G   +   + 
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 462

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K G +++A + ++QM+ +G   D++SY+T+I+   K GK E A  LL+ M  +
Sbjct: 463 TLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 522

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +   ++ +   L + G         + +      S+   YN ++  L K  + D A
Sbjct: 523 GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRA 582

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS-CLKSGVR 420
           I+ F  M     + +  TY+ ++  L     +  A  LL   C +  VR
Sbjct: 583 IDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVR 631



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 194/405 (47%), Gaps = 6/405 (1%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           +++++A C+   F +    L  +   G + D    N +++       +   ++LL ++  
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G  PD+ SYN+++  L    + D+   +  +M+     P  ATFN ++  LC+N   + 
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQ 266

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
                  + +HG  P+L  Y  +I G+CK G    A  IL  +   G  PN + Y T++K
Sbjct: 267 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 326

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
                 +++   ++L+ M ++    D   +  ++  F + G +    + +EQM+  G   
Sbjct: 327 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 386

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D+++Y T+IN +CKEG ++ A +LL  M   G + +  ++TI++ GLC+A     A+  +
Sbjct: 387 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 401
            +M + G   N   +N +++ + K G ++ AI + + M V     D  +YS+++  L KA
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
            +   A +LL   +  G+        ++   L   G  R  K IQ
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREG--RTDKIIQ 549



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 188/410 (45%), Gaps = 16/410 (3%)

Query: 16  TFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT--ILNRMREAG 72
           + C A R  + A A+   G   GV    V YN +I  YC+     AG             
Sbjct: 53  SLCAAGRTADAARALDTAGDAAGV----VAYNAMIAGYCR-----AGQVAAARRLAAAVP 103

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + P+  TY  ++       L++ +L +LDEM   G        + ++    + G    A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R  Q +     T  +   N++++ +C+    D  + + R L   G  P++V+YN ++KGL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C A R      ++ E+   G  PN  T+ T++    RN  ++   E LS M   G T D 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I    K G  + A D + +M + G++ ++V YNT++   C   + E A  LL E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M ++    D  T  IL+D  C+ G +      LE M + G   ++  Y  +++   K+G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 373 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +D A+ + ++M       ++ +Y+ ++  LC+A+R   A +L+   ++ G
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/271 (19%), Positives = 124/271 (45%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V  FC+   +++   ++   +  G +PDV+TY  +I+ +C+    D    +L  M 
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 415

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+ ++Y  ++ G  R      + +L+  M++ G  P+  ++N+L++ + + G  +
Sbjct: 416 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVE 475

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  + + M+    +P   +++ +++GL K   T+ AL +   +   G  P  + Y+ + 
Sbjct: 476 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMA 535

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L + GR      +   + D+    +A  Y  ++    +  +    ++  + M   G  
Sbjct: 536 SALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM 595

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            +   Y  +I      G ++EA D + ++ +
Sbjct: 596 PNESTYTILIRGLASEGLVREAQDLLSELCS 626



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 118/298 (39%), Gaps = 39/298 (13%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT--------- 200
            + ++  LC    T +A R    L   G    +V YN +I G C+AG++           
Sbjct: 47  LSALIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 201 -----------------------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
                                  A  +L E+   G A        I++   R   ++  +
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
             L  +  KG T D      V++A  + G + E  + + ++ + G + DIVSYN ++   
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C   + +    L+ EM + G   +  T   LI  LC+ G  +     L  M + G   +L
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
             Y  I+D + KDG  + A ++   M       +   Y++++  LC A+R   A  LL
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 204/402 (50%), Gaps = 12/402 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
            L T   NI +   C   +  +A    ++ +R    P+ VTYN +I  +C      A   
Sbjct: 113 PLCTTTFNIMLRHLCATGKPVRA----LELLRQMPRPNAVTYNTVIAGFCARGRVQAALE 168

Query: 64  ILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHC 121
           ++  MRE  GI+PD  TY +LI+G  +   +  ++ + DEML  G + P    YN+L+  
Sbjct: 169 VMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGG 228

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
              +GK D A +  +DM+   +    AT+N++++ L  +    +A  +   +QK+GF P+
Sbjct: 229 YCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPD 288

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + TYNILI G CK G  + A  + +E+   G    A+TYT+++    R  + +    + +
Sbjct: 289 VFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFN 348

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
              +KG   D   Y  +I +    G ++ A + M +M    +  D ++YNTL+  +C  G
Sbjct: 349 VAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLG 408

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAY 360
           +L+ A  L+DEM K+G + D  ++  LI G    G+IK A R+  E M+K GF+  L  Y
Sbjct: 409 RLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK-GFNPTLMTY 467

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           N ++  L K  + D A N+ + M  K    D  TY S++  L
Sbjct: 468 NALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 203/415 (48%), Gaps = 10/415 (2%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
            A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++I
Sbjct: 99  PAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVI 154

Query: 85  AGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GD 142
           AG      +  +L+++ EM E G I PD ++Y +L+    ++G+ ++A +VF +M+  G+
Sbjct: 155 AGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGE 214

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P    +N ++ G C     D AL+    + + G    + TYN+L+  L    R   A 
Sbjct: 215 VAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAY 274

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L+E+  +G +P+  TY  ++    +    K  LE+   M +KG       Y ++I  F
Sbjct: 275 AVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVF 334

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            + G+++E        V  G++ D+V YN LIN +C  G +E AY ++ EMEK+    D 
Sbjct: 335 SRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDD 394

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  L+ G C  G +  AR  ++ M K G   +L +YN ++      G I  A+ V + 
Sbjct: 395 MTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDE 454

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           M  K       TY++++  LCK ++   A  L+   +  G+    S   ++++GL
Sbjct: 455 MMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 176/397 (44%), Gaps = 49/397 (12%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + SL L  ++  + +P  V S + L+  L        A  +F D+    L  CT TFNIM
Sbjct: 67  ATSLRLYAQLKSLSVPIPVASLHPLLSSL----PSAPAFALFADIYRLRLPLCTTTFNIM 122

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  LC       AL + R + +    P  VTYN +I G C  GR++ A  +++E+ + G 
Sbjct: 123 LRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGG 178

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEA 271
            AP+  TY T++    +  + +  +++   M  KG        Y  +I  +  +G+L  A
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVA 238

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             Y E MV  G+ + + +YN L++    + +   AY +L+EM+K GF  D +T+ ILI+G
Sbjct: 239 LQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILING 298

Query: 332 LCKAGNIKGARLHLEYMN-----------------------------------KIGFDSN 356
            CK GN K A    E M+                                   K G   +
Sbjct: 299 YCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPD 358

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           +  YN +++     G ++ A  +   ME K    D  TY++++   C   RL  A  L+ 
Sbjct: 359 VVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLID 418

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              K G++    +   ++ G    G  ++A +++ ++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM 455


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 190/373 (50%), Gaps = 3/373 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS    N  + +  K  R+   E++  + IR  +  +VVT++++I+  C+   F     
Sbjct: 191 RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGD 250

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++  M+  G SP V+TYN++I G  +   +  +  LL EM+   I P+  ++N L+    
Sbjct: 251 VVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +      A +VF++M    L P   T+N ++NGLC N   D AL +   +   G  P +V
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI G CK   L+ AR +L ++G  G APN IT+ T++    +  +      + S M
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +   Y  +I  F + G +KEA    ++M  +G++ D+V+YN L++  CK+G+ 
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 304 EAAYLLLDE---MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
             A  LLDE   MEK+G   +  T+ +LI G C  G ++ A   L  M + G   N   Y
Sbjct: 491 RKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550

Query: 361 NCIVDRLGKDGKI 373
           + + D + + G I
Sbjct: 551 DILRDEMMEKGFI 563



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 170/340 (50%), Gaps = 5/340 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +   CK  + +KA  ++ D    G  P V+TYN +ID YC+         +L  M 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              I P+ +T+N LI G  R+  ++ +  + +EM   G+ P+V +YNSL++ L   GK D
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 130 EANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA    QD + G  L P   T+N ++NG CK +    A  M   + K G  P ++T+N L
Sbjct: 352 EA-LGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I    KAGR+  A  +   + D+G  PN  TY  ++    R    K   ++   M+  G 
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470

Query: 249 TFDGFGYCTVIAAFVKIGRLKEAT---DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
             D   Y  ++ A  K G  ++A    D M  M   G + +IV+YN LI  +C +GKLE 
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 530

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           A  LL+EM ++G   ++ T+ IL D + + G I     HL
Sbjct: 531 ANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 570



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           ++   M    I  +VVT++ +I G  +      + D++++M   G  P V +YN+++   
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + GK  +A+ + ++M+   + P   TFNI+++G C++     A ++F  +Q+ G  P +
Sbjct: 275 CKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNV 334

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN LI GLC  G+L  A  +  ++   G  PN +TY  ++    + +  K   E+L  
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           + ++G   +   + T+I A+ K GR+ +A      M+  GV  ++ +YN LI  +C+EG 
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARL--HLEYMNKIGFDSNLEA 359
           ++ A  L  EME  G + D  T+ IL+D LCK G   K  RL   +  M K G  +N+  
Sbjct: 455 VKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVT 514

Query: 360 YNCIVDRLGKDGKIDHAINVFESM 383
           YN ++      GK++ A  +   M
Sbjct: 515 YNVLIKGFCNKGKLEEANRLLNEM 538



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 199/426 (46%), Gaps = 13/426 (3%)

Query: 36  LGVLPDVVTYN---MLIDAYCQFVSFDAGYTILNRMREAGIS--PDVVTYNSLIAGATRN 90
           L +L +   YN    L+D++ +   + +  TI + +   G     + +  + L+    +N
Sbjct: 114 LHLLANAKNYNKIRALLDSFAKNAHY-SNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKN 172

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  +L+  D   + G      S N ++  L + G+      V+++MI   +     TF
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           ++++NGLCK      A  +   ++  GF P ++TYN +I G CKAG++  A  +LKE+  
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
               PN IT+  ++    R+       ++   M+R+G   +   Y ++I      G+L E
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A    ++M   G++ ++V+YN LIN +CK+  L+ A  +LD++ K+G   +  T   LID
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
              KAG +  A L    M   G   N+  YNC++    ++G +  A  + + ME      
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCL---KSGVRILKSAQKAVVDGLRHSGCRREAK 443
           D  TY+ +V  LCK      A +LL       K G R        ++ G  + G   EA 
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532

Query: 444 KIQSKI 449
           ++ +++
Sbjct: 533 RLLNEM 538


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 205/408 (50%), Gaps = 4/408 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + +FC  NR+  A +++   ++LG  PD  T+  LI   C          + ++M 
Sbjct: 103 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  P+VVTY +LI G  +    S ++ LL  M +    PDV  Y S++  L +  +  
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 222

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M+   ++P   T+  +++ LC      +   +   +     +P++V ++ ++
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G++  A  I+  +   G  P+ +TYTT+M       +    +++   M RKG+ 
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I  + KI ++ +A    E+M       D  +YNTL+   C  G+L+ A  L
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM  +G   D  T++IL+D LCK  +++ A   L+ +     + +++ YN I+D + +
Sbjct: 403 FHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 462

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
            G+++ A ++F ++  K      +TY+ M+H LCK   L  A+KL + 
Sbjct: 463 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV P+V T N+LI+++C        +++L ++ + G  PD  T+ +LI G      +  
Sbjct: 94  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 153

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M++ G  P+V +Y +L++ L ++G    A R+ + M  G+  P    +  +++
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TY  L+  LC     +    +L ++ +S   P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + ++T++    +  K     EI+  M ++G   D   Y T++        + EA    
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   D++SY TLIN YCK  K++ A  L +EM ++ +  D  T+  L+ GLC  
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G ++ A      M   G   +L  Y+ ++D L K+  ++ A+ + +++E      D   Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + ++  +C+A  L +A  L  +    G+         ++ GL   G   EA K+
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 191/405 (47%), Gaps = 4/405 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C   ++ +A  +    I  G  P+VVTY  LI+  C+  +  A   +L  M +    PDV
Sbjct: 146 CVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDV 205

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y S+I    ++  ++ + +L  +M+  GI PD+++Y SL+H L  L +      +   
Sbjct: 206 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 265

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   + P    F+ +++ LCK      A  +   + + G  P++VTY  L+ G C    
Sbjct: 266 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 325

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +   +   G AP+ I+YTT++    +  K    + +   M RK +  D   Y T
Sbjct: 326 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 385

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++     +GRL++A     +MV  G   D+V+Y+ L++  CK   LE A  LL  +E   
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D   + I+IDG+C+AG ++ AR     ++  G   ++  YN ++  L K G ++ A 
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +F  M+      D  TY+++     +      A +LL   L  G
Sbjct: 506 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 4/369 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F + D   +  NR+      P +V +  L+    +    S  L L  +M   G+PP+V+
Sbjct: 42  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 101

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + N L++    L +   A  V   ++     P   TF  ++ GLC       AL +F  +
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              GF P +VTY  LI GLCK G    A  +L+ +      P+ + YT+I+    ++R+ 
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                + S M  +G + D F Y +++ A   +   K  T  + QMV   +  D+V ++T+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CKEGK+  A+ ++D M ++G E D  T+T L+DG C    +  A    + M + GF
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASK 409
             ++ +Y  +++   K  KID A+ +FE M     + D+ TY+++++ LC   RL  A  
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 410 LLLSCLKSG 418
           L    +  G
Sbjct: 402 LFHEMVARG 410



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 207/414 (50%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +V +  L+ +  +   +    ++  +M   G+ P+V T N LI      + +  +  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  ++ +L+  L   GK  EA  +F  MI     P   T+  ++NGLCK
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R +++    P++V Y  +I  LCK  ++  A  +  ++   G +P+  T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT+++       ++K    +L+ M       D   + TV+ A  K G++ EA + ++ M+
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+Y TL++ +C + +++ A  + D M ++GF  D  ++T LI+G CK   I 
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M +  +  + + YN ++  L   G++  AI +F  M    ++ D  TYS ++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +LCK + L  A  LL +   S +         ++DG+  +G    A+ + S +
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 476



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 170/343 (49%), Gaps = 4/343 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  +    +  G+ PD+ TY  L+ A C    +    T+LN+M  + I P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           DVV +++++    +   ++ + +++D M++ G+ PDV +Y +LM  HCL    + DEA +
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL--QSEMDEAVK 331

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+     P   ++  ++NG CK    D A+ +F  + +  ++P+  TYN L+ GLC
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+ +TY+ ++    +NR  +  + +L A++      D  
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    + G L+ A D    + + G+   + +YN +I+  CK G L  A  L  EM
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +      D  T+  +  G  +      A   LE M   GF ++
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 8/282 (2%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +  V   CK  ++ +A  I+   I+ GV PDVVTY  L+D +C     D    + + M
Sbjct: 277 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G +PDV++Y +LI G  +   +  ++ L +EM      PD  +YN+LM+ L  +G+ 
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F +M+     P   T++I+L+ LCKNR+ + A+ + + ++     P++  YNI+
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFR---NRKYKLGLEILSAMK 244
           I G+C+AG L  AR +   L   G  P+  TY  ++   C R   N   KL +E    M 
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME----MD 512

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
               + DG  Y T+   F++      A   +E+M+  G   D
Sbjct: 513 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 91/172 (52%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T+  N  +   C   RL+ A A+  + +  G +PD+VTY++L+D+ C+    +    +L 
Sbjct: 380 TKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLK 439

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +  + ++PD+  YN +I G  R   L  + DL   +   G+ P VW+YN ++H L + G
Sbjct: 440 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRG 499

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
             +EAN++F +M   D +P   T+N +  G  +N  T  A+++   +   GF
Sbjct: 500 LLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++ NI +   C+A  LE A  +  +    G+ P V TYN++I   C+    +    +   
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
           M     SPD  TYN++  G  +N+    ++ LL+EML  G   D
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 211/419 (50%), Gaps = 11/419 (2%)

Query: 11  NICVCTFCK-ANRLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +   C+    L +A +++ D  R       P+ V+Y M++   C     D    +L 
Sbjct: 80  NIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLR 139

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+ +G+  DVVTY +LI G    + L  +L+LL EM   G+ P+V  Y+ L+    + G
Sbjct: 140 SMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSG 199

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  + ++VF++M    + P    F   ++ LCK      A+++   + + G  P +VTYN
Sbjct: 200 RWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYN 259

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +LI  LCK G +R A  +  E+ D G AP+ +TY T++       +    + +L  M  +
Sbjct: 260 VLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI-Q 318

Query: 247 GYTF---DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           G T    D   + +VI    KIGR+++A    E M   G   ++V+YN LI  + +  K+
Sbjct: 319 GDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKV 378

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L+ E+   G E D +T++ILI+G  K   +  A + L  M + G  + L  Y  +
Sbjct: 379 NMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPL 438

Query: 364 VDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L + G ++ A+ +F  M++    D+  YS+M++  CK+  + +A +LL   L  G+
Sbjct: 439 LAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGL 497



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C++ R +    +  +  RLGV PDV+ +   ID  C+         + + M + G+ P+
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    +   +  +L L +EM + G+ PDV +YN+L+  L  + + D A  + +
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +MI GD  + P   TFN +++GLCK      A+ +   + + G +  LVTYN LI G  +
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             ++  A  ++ EL  SG  P++ TY+ ++    +  +       L  M ++G   + F 
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++AA  ++G +++A     +M  +   LD V+Y+T++   CK G ++AA  LL +M 
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSGDIKAAKQLLQDML 493

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   D  T++ILI+   K G+++ A   L+ M   GF  ++  ++ ++     +G+I+
Sbjct: 494 DEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQIN 553

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             +++   M  K+       +   C   RLP    LL S
Sbjct: 554 KILDLIHEMRAKNVAIDPKFI---CTLVRLPQQMPLLWS 589



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 8/241 (3%)

Query: 179 VPELVTYNILIKGLC-KAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYK 234
           V + V+YNI++  LC + G LR A  +L ++    H    PNA++YT +M+    +R+  
Sbjct: 73  VRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTD 132

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             + +L +M+  G   D   Y T+I        L  A + + +M   GV  +++ Y+ L+
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLL 192

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             YC+ G+ +    + +EM + G E D    T  ID LCK G I  A    + M + G +
Sbjct: 193 RGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE 252

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            N+  YN +++ L K+G +  A+ +   M+ K    D  TY++++  L     +  A  L
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312

Query: 411 L 411
           L
Sbjct: 313 L 313


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 212/416 (50%), Gaps = 7/416 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FC++++   A + +   ++LG  PD+ T+  LI+ +C     +   +++N+M E
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDVV Y ++I    +N  +  +L L ++M   GI PDV  Y SL++ L   G+  +
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ + + M+   + P   TFN +++   K     +A  ++  + +    P + TY  LI 
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GRL  AR +   +   G  P+ + YT+++    + +K +  ++I   M +KG T 
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F  +G+   A +    MV+ GV  +I +YN L++  C  GK+  A ++ 
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIF 409

Query: 311 DEMEKQ---GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           ++M+K+   G   +  T+ +L+ GLC  G ++ A +    M K   D  +  Y  I+  +
Sbjct: 410 EDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGM 469

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            K GK+  A+N+F S+  K    +  TY++M+  L +   +  A  L     + GV
Sbjct: 470 CKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 206/427 (48%), Gaps = 7/427 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +GV  D+ T N+L++ +CQ        + L ++ + G  PD+ T+ SLI G    + +  
Sbjct: 100 MGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEE 159

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ ++++M+EMGI PDV  Y +++  L + G  D A  +F  M    + P    +  ++N
Sbjct: 160 AMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVN 219

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC +    +A  + RG+ K    P+++T+N LI    K G+L  A+ +  E+     AP
Sbjct: 220 GLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAP 279

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TYT+++       +     ++   M+ KG   D   Y ++I  F K  ++++A    
Sbjct: 280 NIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIF 339

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M   G+  + ++Y TLI  +   GK   A  +   M  +G   +  T+ +L+  LC  
Sbjct: 340 YEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYN 399

Query: 336 GNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----S 388
           G +  A +  E M K    G   N+  YN ++  L  +GK++ A+ VF  M+ +D     
Sbjct: 400 GKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGI 459

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            TY+ ++  +CKA ++  A  L  S    GV+        ++ GL   G   EA  +  K
Sbjct: 460 ITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRK 519

Query: 449 IRMAKIS 455
           ++   +S
Sbjct: 520 MKEDGVS 526



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 186/376 (49%), Gaps = 7/376 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP ++ +  L++   +   FD    +   ++  G+S D+ T N L+    ++S    +  
Sbjct: 68  LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASS 127

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +++++G  PD++++ SL++      + +EA  +   M+   + P    +  +++ LC
Sbjct: 128 FLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLC 187

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           KN + DNAL +F  ++ +G  P++V Y  L+ GLC +GR R A  +L+ +      P+ I
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+  ++    +  K     E+ + M +     + F Y ++I      GRL EA      M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
            T G   D+V+Y +LIN +CK  K+E A  +  EM ++G   +  T+T LI G    G  
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD-------SFTY 391
             A+    +M   G   N+  YN ++  L  +GK++ A+ +FE M+ ++         TY
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427

Query: 392 SSMVHNLCKAKRLPSA 407
           + ++H LC   +L  A
Sbjct: 428 NVLLHGLCYNGKLEKA 443



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/284 (19%), Positives = 129/284 (45%), Gaps = 4/284 (1%)

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           AL   R L    +V     Y  +++    + +   A  +   + +S   P+ I +T ++ 
Sbjct: 20  ALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLN 79

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              + +K+ + + +   ++  G + D +    ++  F +  +   A+ ++ +++  G + 
Sbjct: 80  VIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEP 139

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           DI ++ +LIN +C   ++E A  ++++M + G + D   +T +ID LCK G++  A    
Sbjct: 140 DIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLF 199

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             M   G   ++  Y  +V+ L   G+   A  +   M  +    D  T+++++    K 
Sbjct: 200 NQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKE 259

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +L  A +L    ++  +        ++++GL   G   EA+++
Sbjct: 260 GKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 209/439 (47%), Gaps = 8/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C+   + +A  +++  ++ G   ++ TY +LI   C+         +L  M  
Sbjct: 164 TILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPL 223

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P V TYN++I G  ++  +  +L +   M   G  PD W+YN L++ L    KPDE
Sbjct: 224 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDE 282

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  D I    TP   TF  ++NG CK    D+ALR+   +       +L  Y +LI 
Sbjct: 283 AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLIN 342

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K  R + A+  + E+  +G APN + YT+I+    +  K    LE+   M+ +G   
Sbjct: 343 VLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRP 402

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y ++I   ++  +L +A   + +M  DG+   +++Y TLI   CK+ + + A+ L 
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + ME+ G   D+  + +L   LCK+G  + A     ++ + G       Y  +VD   K 
Sbjct: 463 EMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKA 519

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A  + E M  +    DS+TYS ++  LCK K+L  A  +L     SGV+    A 
Sbjct: 520 GNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAY 579

Query: 427 KAVVDGLRHSGCRREAKKI 445
             ++  +   G    AK +
Sbjct: 580 TIIISEMIKEGKHDHAKSM 598



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 205/436 (47%), Gaps = 8/436 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    N  +  +CK+ R++ A  I     R G  PD  TYN+LI   C     D    +L
Sbjct: 229 SVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELL 287

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N     G +P V+T+ ++I G  +   +  +L +   ML      D+ +Y  L++ L + 
Sbjct: 288 NDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKK 347

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  EA     +M    L P    +  +++G CK      AL +FR ++  G  P   TY
Sbjct: 348 CRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTY 407

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + LI GL +  +L  A  ++ ++ + G  P  ITYTT+++   +  ++     +   M++
Sbjct: 408 SSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 467

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G T D   Y  +  A  K GR +EA  ++   V  GV L  V+Y +L++ + K G  + 
Sbjct: 468 NGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDF 524

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A +L+++M  +G + D YT+++L+  LCK   +  A   L+ M   G   N+ AY  I+ 
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIIS 584

Query: 366 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            + K+GK DHA ++F  M        + TY+  + + CK  ++  A  L+    + GV  
Sbjct: 585 EMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP 644

Query: 422 LKSAQKAVVDGLRHSG 437
                   ++G  H G
Sbjct: 645 DVVTYNVFINGCGHMG 660



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 199/428 (46%), Gaps = 23/428 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL  +   + +    K  R ++A+  + +    G+ P+VV Y  +ID YC+     A   
Sbjct: 331 KLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALE 390

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   G  P+  TY+SLI G  ++  L  ++ L+ +M E GI P V +Y +L+    
Sbjct: 391 VFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQC 450

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D A R+F+ M    LTP    +N++ + LCK+   + A   +  L + G V   V
Sbjct: 451 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVLTKV 507

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ G  KAG    A  +++++ + G   ++ TY+ +++   + +K    L IL  M
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +   Y  +I+  +K G+   A     +M++ G +    +Y   I+ YCK G++
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L+ EME+ G   D  T+ + I+G    G +  A   L+ M     + N   Y  +
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687

Query: 364 VDRLGKDGKID-HAIN------------VFESME--VKD-----SFTYSSMVHNLCKAKR 403
           +    K   +D H ++            V++ +E  VK      + TYSS++   CKA R
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 747

Query: 404 LPSASKLL 411
           L  A  L 
Sbjct: 748 LEEACVLF 755



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 175/363 (48%), Gaps = 8/363 (2%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           +Y  LI G      +  +L LL  M++ G   ++ +Y  L+  L + G+   A RV ++M
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P   T+N M++G CK+    +AL +   ++++G  P+  TYNILI GLC   + 
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKP 280

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L +    G  P  IT+T I+    +  +    L + ++M       D   Y  +
Sbjct: 281 DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVL 340

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I   +K  R KEA + + +M  +G+  ++V Y ++I+ YCK GK+ AA  +   ME +G 
Sbjct: 341 INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGC 400

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             + +T++ LI GL +   +  A   +  M + G    +  Y  ++    K  + D+A  
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 460

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +FE ME      D   Y+ + H LCK+ R   A   L   ++ GV + K    ++VDG  
Sbjct: 461 LFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFS 517

Query: 435 HSG 437
            +G
Sbjct: 518 KAG 520



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 183/412 (44%), Gaps = 24/412 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+     CK+ R E+A + ++   R GV+   VTY  L+D + +  + D    ++ +M  
Sbjct: 478 NVLTHALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 534

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D  TY+ L+    +   L+ +L +LD+M   G+  ++ +Y  ++  + + GK D 
Sbjct: 535 EGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDH 594

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +MI     P   T+ + ++  CK    + A  +   +++ G  P++VTYN+ I 
Sbjct: 595 AKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR----------------KYK 234
           G    G +  A   LK + D+   PN  TY  ++K   +                  +  
Sbjct: 655 GCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD 714

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++L  M + G       Y ++IA F K  RL+EA    + M    +  +   Y  LI
Sbjct: 715 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGF 353
              C       A   + +M + GF+    ++  LI GLC  G+   A+ L  + +    +
Sbjct: 775 KCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDY 834

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
           + N  A+  + D L K G +D    +  +ME +    DS TYS +  N+ +A
Sbjct: 835 NHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEA 886



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 21/275 (7%)

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G LR A W+L  +   G   N  +YT +++     R  +  L +L  M + G + +   
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I    K GR+  A   +E+M   GV   + +YN +I+ YCK G+++ A  +   ME
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G   D +T+ ILI GLC     +   L  + + + GF   +  +  I++   K  +ID
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVR-GFTPTVITFTNIINGYCKAERID 316

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+ V  SM       D   Y  +++ L K  R   A + +     +G+        +++
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 431 DG----------------LRHSGCRREAKKIQSKI 449
           DG                + H GCR  A    S I
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLI 411


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 218/453 (48%), Gaps = 7/453 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR  N  +  F K  + +  +    D I  G  P V TYN++ID   +    +A   +  
Sbjct: 98  TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFE 157

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+ PD VTYNS+I G  +   L  ++   +EM  M   PDV +YNSL++C  + G
Sbjct: 158 EMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSG 217

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +    +++M    L P   +++ +++  CK      A++ +  +++ G VP   TY 
Sbjct: 218 KLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYT 277

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+   CK G L  A  +  E+ + G   N +TYT ++       + K   ++   M   
Sbjct: 278 SLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTA 337

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I  FVK   +  A + + ++   G+Q D++ Y T I   C   K+EAA
Sbjct: 338 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAA 397

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            ++++EM++ G + +   +T L+D   K+GN       LE M ++  +  +  +  ++D 
Sbjct: 398 KVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDG 457

Query: 367 LGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           L K+  +  AI+ F  M        ++  Y++M+  LCK  ++ +A+ L     + G+  
Sbjct: 458 LCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVP 517

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            ++A  +++DG    G   EA  ++ K  MA+I
Sbjct: 518 DRTAYTSLMDGNLKQGNMLEALALRDK--MAEI 548



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 189/374 (50%), Gaps = 1/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ +L K      +  + G+ P+VV+Y+ L+DA+C+             MR 
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRR 266

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+  TY SL+    +   LS +  L +EMLE+G+  +V +Y +L+  L    +  E
Sbjct: 267 VGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKE 326

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F  M+   + P  A++N +++G  K +  D AL +   L+  G  P+L+ Y   I 
Sbjct: 327 AEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIW 386

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   ++  A+ ++ E+ ++G   N + YTT+M   F++     GL +L  M+   +  
Sbjct: 387 GLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEV 446

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               +C +I    K   + +A DY  +M  D G+Q +   Y  +I+  CKE +++AA  L
Sbjct: 447 TVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTL 506

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            ++M ++G   D+  +T L+DG  K GN+  A    + M +IG   +L AY  +V    +
Sbjct: 507 FEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQ 566

Query: 370 DGKIDHAINVFESM 383
             ++  A +  E M
Sbjct: 567 CNQLQKARSFLEEM 580



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +L  +     +M    + P   S N L+H   +LGK D   R 
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DMI     P   T+NIM++ + K    + A  +F  ++  G +P+ VTYN +I G  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL    +  +E+      P+ ITY +++ C  ++ K   GLE    MK+ G   +   
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++ AF K   +++A  +   M   G   +  +Y +L++  CK G L  A+ L +EM 
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G E +  T+T LIDGLC A  +K A      M   G   NL +YN ++    K   +D
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+ +   ++ +    D   Y + +  LC  +++ +A  ++    ++G++        ++
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 431 DGLRHSGCRREA 442
           D    SG   E 
Sbjct: 421 DAYFKSGNPTEG 432



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 1/273 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R+++AE +    +  GV+P++ +YN LI  + +  + D    +LN ++  GI PD
Sbjct: 318 LCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPD 377

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++ Y + I G      +  +  +++EM E GI  +   Y +LM   F+ G P E   + +
Sbjct: 378 LLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLE 437

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKA 195
           +M   D      TF ++++GLCKN+    A+  F R     G  P    Y  +I GLCK 
Sbjct: 438 EMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKE 497

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            +++ A  + +++   G  P+   YT++M    +       L +   M   G   D   Y
Sbjct: 498 NQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAY 557

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
            +++  F +  +L++A  ++E+M+ + +  D V
Sbjct: 558 TSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 4/149 (2%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ P+   Y  +ID  C+     A  T+  +M + G+ PD   Y SL+ G  +   +  
Sbjct: 478 FGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLE 537

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M E+G+  D+ +Y SL+    Q  +  +A    ++MI  ++ P      ++  
Sbjct: 538 ALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD----EVLCI 593

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           G+ K  Y    +    GLQ +    +L+T
Sbjct: 594 GVLKKHYELGCIDEAVGLQSYLMKHQLLT 622


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 217/479 (45%), Gaps = 37/479 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  L N+ + +  K  R++    +  D +  GV P+  T+N+LI   C     D    + 
Sbjct: 20  SIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELF 79

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M E G  P+  ++  L+ G  R    S  L+LL EM  +G  P+   YN+L+    + 
Sbjct: 80  DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKE 139

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----PE 181
           GK D+A ++  +M    L+P   TFN  ++ LC +     A R+FR +Q    +    P 
Sbjct: 140 GKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPN 199

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           ++TYN+++ G CK G L  AR + +++  S +  N  +Y   +    R  K      +L 
Sbjct: 200 IITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLK 259

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   + + Y  V+    K G L +A   M  M + GV  D V+Y TL++ YC  G
Sbjct: 260 EMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTG 319

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+  A  +L EM + G   + YT  IL+  L K G I  A   L+ MN+ G+  +    N
Sbjct: 320 KVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCN 379

Query: 362 CIVDRLGKDGKIDHAINVFESME---------------------------VKDSFTYSSM 394
            ++D L  +GK+D AI +   M                            + D  +YS++
Sbjct: 380 IVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTI 439

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           +  LCKA R+  A K  +  +   ++       A+ D   HS C+    KI S  R+ K
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQ----PDSAIYDVFIHSFCKE--GKISSAFRVLK 492



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 227/469 (48%), Gaps = 34/469 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-FVSFDAGYTILNRMR 69
           NI +    +  +L +A+ ++ + + +G+ P+V +YN+++D  C+  V FDA   ++  M 
Sbjct: 239 NIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA-RMLMRLMT 297

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G+ PD VTY +L+ G      +S + ++L EM+  G  P+ ++ N L++ L++ G+  
Sbjct: 298 SSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF----------- 178
           EA  + Q M        T T NI+++GLC N   D A+ +  G+  HG            
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417

Query: 179 ------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
                       +P+L++Y+ +I GLCKAGR+  A+    E+      P++  Y   +  
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +  K      +L  M++KG       Y ++I       ++ E    +++M   GV  D
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +  YN +++  C+ G+++ A  +LDEM ++G   +  + +ILI   CKA +        E
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597

Query: 347 Y-MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE-----SMEVKDSFTYSSMVHNLCK 400
             +N  G    L  Y+   + L   G++  A  +FE     S +V + F Y  ++ +LCK
Sbjct: 598 IALNVCGHKEAL--YSLTFNELLVGGEVVKAKELFETALDRSFDVGN-FLYKDLIDHLCK 654

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++L  AS +L   +  G     ++   V+DGL   G + EA ++  K+
Sbjct: 655 DEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 199/457 (43%), Gaps = 66/457 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +FCK  + + AE ++ +  + G+ PDVVT+N  I A C          I   M+ 
Sbjct: 130 NTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189

Query: 71  AGI----SPDVVTYNSLIAGATRNSLLSCSLDL--------------------------- 99
             +     P+++TYN ++ G  +  +L  +  L                           
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIG 249

Query: 100 --------LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
                   L EM++MG+ P+V+SYN +M  L + G   +A  + + M    + P T T+ 
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +L+G C       A  + R + + G  P   T NIL+  L K GR+  A  +L+++ + 
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-----------------------KRKGY 248
           G+  + +T   ++     N K    +EI++ M                        RK  
Sbjct: 370 GYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKC 429

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T+I+   K GR+ EA     +M+   +Q D   Y+  I+ +CKEGK+ +A+ 
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L +MEK+G      T+  LI GL     I      ++ M + G   ++  YN ++  L 
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLC 549

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
           + G++  A +V + M  K    +  ++S ++   CKA
Sbjct: 550 EGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKA 586



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 166/318 (52%), Gaps = 8/318 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP ++ YN L+    + G+ D  + + +DM+   ++P T TFN+++  LC +   D+A  
Sbjct: 18  PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  + + G  P   ++ IL++G C+AG       +L E+   G +PN + Y T++    
Sbjct: 78  LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV----Q 284
           +  K     +++  M++ G + D   +   I+A    G++ EA+     M  D V    Q
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +I++YN ++  +CKEG LE A  L ++M+      ++ ++ I + GL + G +  A+L 
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
           L+ M  +G + N+ +YN ++D L K+G +  A  +   M     + D+ TY++++H  C 
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 401 AKRLPSASKLLLSCLKSG 418
             ++  A+ +L   ++ G
Sbjct: 318 TGKVSEANNVLREMMRDG 335



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 8/379 (2%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           R R     P +  YN L+   T+   + C   L  +M+  G+ P+ +++N L+  L   G
Sbjct: 11  RFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSG 70

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             D+A  +F  M      P   +F I++ G C+  +T   L +   +++ GF P  V YN
Sbjct: 71  CLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYN 130

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI   CK G+   A  ++ E+   G +P+ +T+   +     + K      I   M+  
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQID 190

Query: 247 GY----TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                   +   Y  ++  F K G L+EA    E+M      ++  SYN  +    + GK
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L  A L+L EM   G E + Y++ I++DGLCK G +  AR+ +  M   G   +   Y  
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTT 310

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++      GK+  A NV   M       +++T + ++++L K  R+  A +LL    + G
Sbjct: 311 LLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKG 370

Query: 419 VRILKSAQKAVVDGLRHSG 437
             I       V+DGL ++G
Sbjct: 371 YVIDTVTCNIVIDGLCNNG 389



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 7/269 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA R+ +A+   I+ +   + PD   Y++ I ++C+     + + +L  M + G 
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +  + TYNSLI G    + +     L+DEM E G+ PDV  YN+++  L + G+  +A  
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKN---RYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           V  +M+   ++P  ++F+I++   CK       D    +   +  H      +T+N L+ 
Sbjct: 560 VLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLV 619

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G +  A+ + +   D         Y  ++    ++ K      IL  +  KGY F
Sbjct: 620 G----GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWF 675

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           D   +  VI    K G   EA +  E+M+
Sbjct: 676 DPASFMPVIDGLGKRGNKHEADELAEKMM 704



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 5/220 (2%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           + + ++ + +FCK  ++  A  ++ D  + G    + TYN LI            Y +++
Sbjct: 468 SAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLID 527

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MRE G+SPDV  YN++++       +  +  +LDEML+ GI P++ S++ L+    +  
Sbjct: 528 EMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKAC 587

Query: 127 KPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                + +F+    +CG      A +++  N L        A  +F       F      
Sbjct: 588 DFSAVDEIFEIALNVCGHK---EALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFL 644

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           Y  LI  LCK  +L  A  IL +L D G+  +  ++  ++
Sbjct: 645 YKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVI 684



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/231 (18%), Positives = 90/231 (38%), Gaps = 41/231 (17%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + C+  R++ A +++ + ++ G+ P++ ++++LI A+C+   F A   I    
Sbjct: 540 IYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE-- 597

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               I+ +V  +   +   T N LL                                G+ 
Sbjct: 598 ----IALNVCGHKEALYSLTFNELLVG------------------------------GEV 623

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F+  +          +  +++ LCK+   D+A  +   L   G+  +  ++  +
Sbjct: 624 VKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPV 683

Query: 189 IKGLCKAGRLRTARWI---LKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           I GL K G    A  +   + E+   G   N +       C  + +K K G
Sbjct: 684 IDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNA--SCSIQGKKNKDG 732


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 216/428 (50%), Gaps = 6/428 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   +++A ++    +R GVLPDVVT + L+D  C+   F   Y +   M + G++P+
Sbjct: 267 YCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPN 326

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY +LI    +    S SL LL EM+  G+  D+  Y +LM  L + GK +EA  V +
Sbjct: 327 HVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLR 386

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                ++TP   T+ ++++  C+    D A ++   +++   +P +VT++ +I GL K G
Sbjct: 387 HAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRG 446

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A   ++++ DSG APN +TY T++   F+ +  +  L++   M  +G   + F   
Sbjct: 447 CLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVD 506

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +++    K G ++ A    + M   G+ LD V+Y TL++   K G + AA+ +  E+ ++
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D   + + I+ LC  G    A+  L+ M   G + +   YN ++    ++GK   A
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA 626

Query: 377 INVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + + + M+   +K +  TY+++V  L +A  +  A  LL     +G        + V+  
Sbjct: 627 LKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686

Query: 433 LRHSGCRR 440
              SG RR
Sbjct: 687 C--SGSRR 692



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 39/435 (8%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGY-------------------TILNRMR-------- 69
           G+ P+VVTY  LID + +F   +A                     +++N +R        
Sbjct: 462 GIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGA 521

Query: 70  --------EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
                   E G+  D V Y +L+ G  +   +  +  +  E++E  + PD   YN  ++C
Sbjct: 522 EALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINC 581

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L  LGK  EA    ++M    L P  AT+N M+   C+   T  AL++ + ++++   P 
Sbjct: 582 LCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN 641

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TY  L+ GL +AG ++ A+++L E+  +G AP ++T+  +++ C  +R+  + LEI  
Sbjct: 642 LITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHE 701

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D   Y T++      G  + AT  +++M+T G+  D +++N LI  +CK  
Sbjct: 702 LMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSS 761

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A+ +  +M  QG   +  T   L+ GL  AG I  A   L  M K+G + N   Y+
Sbjct: 762 HLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYD 821

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +V    K      A+ ++  M  K     + TY+S++ +  KA  +  A +L     + 
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881

Query: 418 GVRILKSAQKAVVDG 432
           GV    S    +++G
Sbjct: 882 GVLHTSSTYDILLNG 896



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 198/414 (47%), Gaps = 4/414 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   +  A A++      GV  DVV YN L+  +      DA   ++ RM+ 
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTY +LI    +   +  +  L + M+  G+ PDV + ++L+  L + G+  E
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M    + P   T+  +++ L K R    +L +   +   G V +LV Y  L+ 
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K G++  A+ +L+        PN +TYT ++    R        ++L  M+ K    
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + ++I   VK G L +A DYM +M   G+  ++V+Y TLI+ + K    EAA  + 
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G E + +    L++GL K GNI+GA    + M++ G   +   Y  ++D L K 
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           G +  A  V + +  K    D+  Y+  ++ LC   +   A   L     +G+ 
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 188/384 (48%), Gaps = 4/384 (1%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVV +N+LI G  +   ++ +L +++ M   G+  DV  YNSL+   F  G  D A  V 
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M    + P   T+  ++   CK +  D A  ++ G+ + G +P++VT + L+ GLC+ 
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+   A  + +E+   G APN +TY T++    + R+    L +L  M  +G   D   Y
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++    K G+++EA D +    +D +  + V+Y  L++ +C+ G ++ A  +L +ME+
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T + +I+GL K G +  A  ++  M   G   N+  Y  ++D   K    + 
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A++V+  M  +    ++F   S+V+ L K   +  A  L     + G+ +       ++D
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545

Query: 432 GLRHSGCRREAKKIQSKIRMAKIS 455
           GL  +G    A K+  ++    +S
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLS 569



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 212/471 (45%), Gaps = 74/471 (15%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  ++E+A+ ++       + P+ VTY +L+DA+C+  + D    +L +M E  + P+VV
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVV 433

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T++S+I G  +   L  + D + +M + GI P+V +Y +L+   F+    + A  V++DM
Sbjct: 434 TFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDM 493

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   +       + ++NGL KN   + A  +F+ + + G + + V Y  L+ GL K G +
Sbjct: 494 LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNM 553

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  + +EL +   +P+A+ Y   + C                             CT 
Sbjct: 554 PAAFKVGQELMEKNLSPDAVVYNVFINCL----------------------------CT- 584

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
                 +G+  EA  ++++M   G++ D  +YNT+I   C+EGK   A  LL EM++   
Sbjct: 585 ------LGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSI 638

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF------------------------- 353
           + +  T+T L+ GL +AG +K A+  L  M   GF                         
Sbjct: 639 KPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698

Query: 354 ----------DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
                      +++  YN +V  L   G   +A  V + M  +    D+ T+++++   C
Sbjct: 699 IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHC 758

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           K+  L +A  +    L  G+    +    ++ GL  +G   EA  + S ++
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 163/376 (43%), Gaps = 35/376 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   +  +A++ + +    G+ PD  TYN +I A C+         +L  M+ 
Sbjct: 576 NVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-------------------- 110
             I P+++TY +L+ G     ++  +  LL+EM   G  P                    
Sbjct: 636 NSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDV 695

Query: 111 ---------------DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                          D+  YN+L+H L   G    A  V  +M+   + P T TFN ++ 
Sbjct: 696 ILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+ + DNA  ++  +   G  P + T+N L+ GL  AGR+  A  +L ++   G  P
Sbjct: 756 GHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEP 815

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  ++    +       L +   M  KG+      Y ++++ F K G + +A +  
Sbjct: 816 NNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELF 875

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M   GV     +Y+ L+N + K        +LL +M++ GF+  K T + +     + 
Sbjct: 876 SEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRP 935

Query: 336 GNIKGARLHLEYMNKI 351
           G    AR  L+ + K+
Sbjct: 936 GMTGEARRLLKTLFKV 951



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 150/349 (42%), Gaps = 35/349 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD V YN+ I+  C    F    + L  MR  G+ PD  TYN++IA   R    S +L L
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT---------- 149
           L EM    I P++ +Y +L+  L + G   +A  +  +M      P + T          
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689

Query: 150 -------------------------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                                    +N +++ LC +    NA  +   +   G  P+ +T
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N LI G CK+  L  A  I  ++   G +PN  T+ T++       +      +LS MK
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           + G   +   Y  ++  + K     EA     +MV+ G      +YN+L++ + K G + 
Sbjct: 810 KVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMN 869

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            A  L  EM+++G      T+ IL++G  K  N    R+ L+ M ++GF
Sbjct: 870 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGF 918



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 41/350 (11%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           T ++NI L  L +  +   A  +   + K G   + VT +  + GLC+ G +  A  + +
Sbjct: 115 TVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAE 174

Query: 207 EL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            L  G      + + +  ++    + +     L ++  M  +G   D  GY +++A F  
Sbjct: 175 MLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFH 234

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G    A + +E+M  DGV+ ++V+Y  LI  YCK   ++ A+ L + M + G   D  T
Sbjct: 235 SGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSN---------------------------- 356
            + L+DGLC+ G    A      M+KIG   N                            
Sbjct: 295 LSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV 354

Query: 357 -------LEAYNCIVDRLGKDGKIDHAINVF---ESMEVKDSF-TYSSMVHNLCKAKRLP 405
                  L  Y  ++DRLGK+GKI+ A +V    +S  +  +F TY+ +V   C+A  + 
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A ++LL   +  V        ++++GL   GC  +A     K++ + I+
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIA 464



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 99/202 (49%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   CK++ L+ A AI    +  G+ P++ T+N L+             T+L+
Sbjct: 747 TITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS 806

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M++ G+ P+ +TY+ L+ G  + S    +L L  EM+  G  P   +YNSLM    + G
Sbjct: 807 DMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAG 866

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             ++A  +F +M    +   ++T++I+LNG  K R       + + +++ GF P   T +
Sbjct: 867 MMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTIS 926

Query: 187 ILIKGLCKAGRLRTARWILKEL 208
            + +   + G    AR +LK L
Sbjct: 927 SMSRAFSRPGMTGEARRLLKTL 948



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 15/254 (5%)

Query: 179 VP-ELVTYNILIKGLCKAGRLRTARWILKELGDSGH----APNAITYTTIMKCCFRNRKY 233
           VP + +T N +I   C    LR A  +L+           A + ++Y   +         
Sbjct: 72  VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHG 131

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV----TDGVQLDIVS 289
           +L   +LS M ++G ++DG    T +    + G + EA    E +V     DG  LD+V 
Sbjct: 132 RLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDG--LDVVG 189

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           +N LI+ YCK   + AA  +++ M  QG   D   +  L+ G   +G+   A   +E M 
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 405
             G + N+  Y  ++    K   +D A +++E M     + D  T S++V  LC+  +  
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309

Query: 406 SASKLLLSCLKSGV 419
            A  L     K GV
Sbjct: 310 EAYALFREMDKIGV 323


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 191/370 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +TR   I +  FCK   L+ A +++ +  +  + PD+ TY+ LIDA C+   ++   T
Sbjct: 210 KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I P+V T+NS+I G  +   +  + +++  M+E G+ PDV +YN ++    
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+ D A  +F  MI   + P   ++NI++NG  + +  D A+++ R + + G  P +V
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T N+L+ GL + GR ++A+    E+  +GH P+  T+ T++   F+N   +  +     +
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +R+    +   Y  VI    K G+L +A    E++   G+  D+++Y  +I+ YC+EG L
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  +L +ME  G   D  T+ +++ G  ++  +   +  LE +    F         +
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 364 VDRLGKDGKI 373
           +D + +D  I
Sbjct: 570 MDIIAEDPSI 579



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 190/376 (50%), Gaps = 4/376 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ V Y  +++  C+       + +L  M +    P+  TY  +I    ++ +L  +  L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM +  IPPD+++Y++L+  L +L + +    +F +MI  ++ P   TFN +++GLCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               ++A  + R + + G  P+++TYN++I G    G++  AR I   + +    P+ I+
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIIS 355

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R +K    +++   + +KG          ++    ++GR K A ++ ++M+
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   D+ ++ TL+  Y K G +E A     ++E++  + +   +T +IDGLCK G + 
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A    E +  IG   ++  Y  ++    ++G +D A ++   ME    + D+ TY+ +V
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535

Query: 396 HNLCKAKRLPSASKLL 411
               ++ ++      L
Sbjct: 536 RGFLRSNKVSEMKAFL 551



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 194/444 (43%), Gaps = 40/444 (9%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           ++++++ C     D G+++L    + GI  + VT+ +LI G    + +  ++ L  +++ 
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170

Query: 106 MGI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             I  P+   Y ++M+ L + G   +A  + + M  G   P T T+ I+++  CK+   D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A  +   +++    P++ TY+ LI  LCK  +    R +  E+      PN  T+ +++
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  K +   EI+  M  KG   D   Y  +I  +   G++  A +  + M+   ++
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 285 LDIVSYNTLINLY------------CKE-----------------------GKLEAAYLL 309
            DI+SYN LIN Y            C+E                       G+ ++A   
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            DEM   G   D YTH  L+ G  K G ++ A  H   + +   D+N++ Y  ++D L K
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +GK+D A   FE + +     D  TY++M+   C+   L  A  +L     +G       
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              +V G   S    E K    +I
Sbjct: 531 YNVIVRGFLRSNKVSEMKAFLEEI 554



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 40/355 (11%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----HGFVPEL- 182
           D+A  +F+ M+     P  A+F+ +L  +   ++  + + +FR + K     H F+  + 
Sbjct: 54  DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 183 -----------------------------VTYNILIKGLCKAGRLRTARWILKEL-GDSG 212
                                        VT+  LI+GL    +++ A  + K+L  ++ 
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN + Y T+M    +    +   ++L  M++     +   Y  VI AF K G L  AT
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             + +M    +  DI +Y+TLI+  CK  + E    L  EM       +  T   +IDGL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G ++ A   + YM + G D ++  YN I+D  G  G++D A  +F+SM  K    D 
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            +Y+ +++   + K++  A ++     + G++        ++ GL   G  + A+
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQ 408


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 212/449 (47%), Gaps = 51/449 (11%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +++Y+++ID  C+    D    +   M+  GI PDV++Y +LI G   +     +  L
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EML++GI PDV + + L+  L + GK  EAN++ + +I     P   T   ++ GLC 
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 160 NRYTDNALRMFRGLQKHGFVPELVT----------------------------------- 184
                 A ++F  +QK G +P +VT                                   
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 185 ------YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                 Y+I+I GLCK GR   AR + KE+   G  P+ I+YT+++    R+ K+K    
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + + M   G   D   +  +I    K G++ EA + +E M+  G   + V+Y TL+   C
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIG----- 352
              ++  A  L  +M+K G   D  T+  L+ GLC+ GNIK A  LH + ++  G     
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
           F  ++ +Y+ I+D L K G+ D A  +F+ M+    + +  +Y+S++H  C++ +L  A 
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            L    +  GV++       ++ G    G
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 206/407 (50%), Gaps = 16/407 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC + + EKA+ +  + + +G+ PDV T ++LID  C+         +L  + + G  PD
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT  +L+ G      +S +  L  +M ++G  P+V +  +LM  L Q G    A  + +
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466

Query: 137 DMICG------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +M+        +  P   +++I+++GLCK    D A  +F+ ++  G +P++++Y  LI 
Sbjct: 467 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 526

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C++G+ + A+++  E+ D G  P+  T++ ++    +  K     E+L  M ++G   
Sbjct: 527 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T++       R+ EAT    +M   G   D+V+Y TL+   C+ G ++ A  L 
Sbjct: 587 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 646

Query: 311 DEMEKQ------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +M          F+ D  +++I+IDGLCK G    AR   + M  +G   N+ +Y  ++
Sbjct: 647 KKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLI 706

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
               + GK++ A ++F  M  +    ++ TYS M+H  CK  ++  A
Sbjct: 707 HGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 218/457 (47%), Gaps = 51/457 (11%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +V+Y+++ID  C+    D    +   M+  G+ PDV++Y SLI G  R+     +  L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EML++GI  DV + + L+  L + GK  EAN + + MI         T++ ++ GLC 
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH----- 213
                 A R+F  +QK G  P+ + Y  L+KGLC+ G + TA  + +E L D+G      
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P  I+Y+ I+    ++R+     E+   MK +G   D   Y T+I  F   G+ ++A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD---------------------- 311
              +M+  G+Q D+ + + LI++ CK+GK+  A  LL+                      
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 312 -------------EMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK-----IG 352
                        +M+K G   +  T   L+ GLC++GNIK A  LH   ++      I 
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
              N  +Y+ I+D L K G+ D A  +F+ M+    + D  +Y+S++H  C++ +   A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            L    +  GV+   +    ++D L   G   EA ++
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 217/456 (47%), Gaps = 22/456 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI----LNRMREAG 72
            C  +R+ +A  + +   +LG  PD + Y  L+   CQ  + +    +    LN     G
Sbjct: 236 LCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295

Query: 73  IS--PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           I   P +++Y+ +I G  ++     + +L  EM   GI PDV SY +L+H     GK ++
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   + P   T +++++ LCK      A ++   + + G +P++VT   L+K
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   R+  A  +  ++   G  PN +T  T+MK   ++   K+ LE+   M      +
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 475

Query: 251 ------DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                 +   Y  +I    K GR  EA +  ++M   GV  D++SY +LI+ +C+ GK +
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L +EM   G + D  T ++LID LCK G +  A   LE M + G   N   Y  +V
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA----SKLLLSCLK 416
             L  + +I  A  +F  M+    + D  TY +++  LC+   + +A     K+L    +
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 417 SGVRILKS--AQKAVVDGLRHSGCRREAKKIQSKIR 450
            G        +   ++DGL   G   EA+++  +++
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMK 691



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 229/485 (47%), Gaps = 53/485 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC++ + EKA+ +  + + +G+  DV T +MLID  C+         +L  M + G   D
Sbjct: 166 FCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD 225

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY++LI G      +S +  L   M ++G  PD  +Y +LM  L Q G  + A ++ Q
Sbjct: 226 IVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQ 285

Query: 137 DMICG------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +M+           P   +++I+++GLCK+R  D A  +F+ ++  G +P++++Y  LI 
Sbjct: 286 EMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIH 345

Query: 191 GLCKAGRLRTARWILKELGDSGHA-----------------------------------P 215
           G C +G+   A+ +  E+ D G                                     P
Sbjct: 346 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIP 405

Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           + +T TT++K  C ++R  K   ++   M++ G   +     T++    + G +K A + 
Sbjct: 406 DVVTCTTLVKGLCMKHRISK-ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 275 MEQMVTDGVQLDI------VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            + M++D     I      +SY+ +I+  CK G+ + A  L  EM+  G   D  ++T L
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           I G C++G  K A+     M  IG   ++  ++ ++D L K+GK+  A  + E M     
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 584

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           + ++ TY+++V  LC   R+  A++L +   K G          ++ GL  +G  + A +
Sbjct: 585 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 644

Query: 445 IQSKI 449
           +  K+
Sbjct: 645 LHKKM 649



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 160/281 (56%), Gaps = 8/281 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ ++Y+++ID  C+    D    +   M+  G+ PDV++Y SLI G  R+     +  L
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EM+++G+ PDV +++ L+  L + GK  EAN + + MI     P T T+  ++ GLC 
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 600

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH----- 213
           N     A ++F  +QK G +P++VTY  L+KGLC+ G ++TA  + K+ L D+G      
Sbjct: 601 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 660

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ I+Y+ I+    ++ +     E+   MK  G   +   Y ++I  F + G+L++A  
Sbjct: 661 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 720

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
              +MV  GVQL+ V+Y+ +I+ +CKEG+++ A  L  +ME
Sbjct: 721 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 759



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 198/402 (49%), Gaps = 18/402 (4%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + +G+ PDV T  +LID +C+         +L  M + G   D+VTY++LI G      +
Sbjct: 2   LHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRI 61

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-------PC 146
           S +  L   M ++G  PD  +Y +LM  L Q GK + A  + Q+M+  D +       P 
Sbjct: 62  SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML-NDTSQYGIKCKPT 120

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
             +++I+++GLCK+R  D A  +F+ ++  G +P++++Y  LI G C++G+   A+ +  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+ D G   +  T + ++    +  K     E+L  M ++G   D   Y T+I       
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM----EKQGFECDK 322
           R+ EAT     M   G + D ++Y TL+   C+ G +  A  L  EM     + G +C  
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 323 --YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
              +++I+IDGLCK      AR   + M   G   ++ +Y  ++      GK + A  +F
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 381 -ESMEV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            E ++V    D  T S ++  LCK  ++  A+KLL   ++ G
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 402



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 192/380 (50%), Gaps = 14/380 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ +A  ++   I+ G +PDVVT   L+   C          +  +M++ G  P+
Sbjct: 382 LCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPN 441

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP------PDVWSYNSLMHCLFQLGKPDE 130
           VVT  +L+ G  ++  +  +L+L   ML    P      P+  SY+ ++  L + G+ DE
Sbjct: 442 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 501

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M    + P   ++  +++G C++    +A  +F  +   G  P++ T+++LI 
Sbjct: 502 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 561

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK G++  A  +L+ +   G  PN +TYTT++K    N +     ++   M++ G   
Sbjct: 562 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 621

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL------DIVSYNTLINLYCKEGKLE 304
           D   Y T++    + G +K A +  ++M++D  Q       D++SY+ +I+  CK G+ +
Sbjct: 622 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 681

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L  EM+  G   +  ++T LI G C++G ++ A+     M   G   N   Y+ ++
Sbjct: 682 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741

Query: 365 DRLGKDGKIDHAINVFESME 384
               K+G+ID A+  F+ ME
Sbjct: 742 HGFCKEGQIDKAL--FQKME 759


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 213/419 (50%), Gaps = 5/419 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           +++ + + ++ +   V P++ TYN +++ YC+  + +     ++++ EAG+ PD  TY S
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI G  +   L  +  + +EM   G   +  +Y  L+H L    + DEA  +F  M   +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   T+ +++  LC +     AL + + +++ G  P + TY +LI  LC   +   AR
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L ++ + G  PN ITY  ++    +    +  ++++  M+ +  + +   Y  +I  +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K   + +A   + +M+   V  D+V+YN+LI+  C+ G  ++AY LL  M  +G   D+
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +T+T +ID LCK+  ++ A    + + + G + N+  Y  ++D   K GK+D A  + E 
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           M  K    +S T+++++H LC   +L  A+ L    +K G++   S    ++  L   G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 195/397 (49%), Gaps = 20/397 (5%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  N  +  +CK+N + KA  ++   +   VLPDVVTYN LID  C+  +FD+ Y +L
Sbjct: 427 NTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M + G+ PD  TY S+I    ++  +  + DL D + + G+ P+V  Y +L+    + 
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK DEA+ + + M+  +  P + TFN +++GLC +     A  +   + K G  P + T 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI  L K G    A    +++  SG  P+A TYTT ++   R  +     ++++ M+ 
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN--LYCKEGK- 302
            G + D F Y ++I  +  +G+   A D +++M   G +    ++ +LI   L  K GK 
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725

Query: 303 ---------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
                           +    LL++M +     +  ++  LI G+C+ GN++ A    ++
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785

Query: 348 MNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           M +  G   +   +N ++    K  K + A  V + M
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN+L+    R  L+     +  EMLE  + P++++YN +++   +LG  +EAN+    ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              L P   T+  ++ G C+ +  D+A ++F  +   G     V Y  LI GLC A R+ 
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  +  ++ D    P   TYT ++K    + +    L ++  M+  G   +   Y  +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
            +     + ++A + + QM+  G+  ++++YN LIN YCK G +E A  +++ ME +   
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +  T+  LI G CK+ N+  A   L  M +     ++  YN ++D   + G  D A  +
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 380 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
              M     V D +TY+SM+ +LCK+KR+  A  L  S  + GV        A++DG   
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544

Query: 436 SGCRREAKKIQSKI 449
           +G   EA  +  K+
Sbjct: 545 AGKVDEAHLMLEKM 558



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 20/402 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK+ R+E+A  +     + GV P+VV Y  LID YC+    D  + +L +M      P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + +T+N+LI G   +  L  +  L ++M+++G+ P V +   L+H L + G  D A   F
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q M+     P   T+   +   C+     +A  M   ++++G  P+L TY+ LIKG    
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMK-----------------CCFRNR-KYKLGL 237
           G+   A  +LK + D+G  P+  T+ +++K                 C   N  ++   +
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINL 296
           E+L  M     T +   Y  +I    ++G L+ A    + M   +G+    + +N L++ 
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK  K   A  ++D+M   G      +  +LI GL K G  +      + + + G+  +
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
             A+  I+D +GK G ++    +F  ME K+   +SS  ++L
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVME-KNGCKFSSQTYSL 906



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 154/341 (45%), Gaps = 19/341 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   +L++A  +    +++G+ P V T  +LI    +   FD  Y+   +M 
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G  PD  TY + I    R   L  + D++ +M E G+ PD+++Y+SL+     LG+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT------------------DNALRMFR 171
            A  V + M      P   TF  ++  L + +Y                   D  + +  
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRN 230
            + +H   P   +Y  LI G+C+ G LR A  +   +  + G +P+ + +  ++ CC + 
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
           +K+    +++  M   G+         +I    K G  +  T   + ++  G   D +++
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             +I+   K+G +EA Y L + MEK G +    T+++LI+G
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 39/275 (14%)

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN L+  L + G +   + +  E+ +    PN  TY  ++                    
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN------------------- 226

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                    GYC       K+G ++EA  Y+ ++V  G+  D  +Y +LI  YC+   L+
Sbjct: 227 ---------GYC-------KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +A+ + +EM  +G   ++  +T LI GLC A  I  A      M        +  Y  ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330

Query: 365 DRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L    +   A+N+ + ME   +K +  TY+ ++ +LC   +   A +LL   L+ G+ 
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                  A+++G    G   +A  +   +   K+S
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 199/399 (49%), Gaps = 8/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+ +A  ++   +  G +P V+TY  L+   C+    D    +L R+ E     +
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----N 310

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV +N++I G      L+ + +L + M   G  PD  +Y+ LMH L +LG+   A R+ +
Sbjct: 311 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLR 370

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+ I+L+  CKN   D+   +   +   G       YN +I  LCK G
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  +++E+   G  P+  +Y TI+     N + +    +   +  +G   +G  Y 
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I A ++ GR ++A    ++M+  G  LD+VSYN LI   CK+G ++ + +LL+EM ++
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++ ILI  LCK   ++ A    + M   G   ++  YN +++ L K G +  A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +N+ E +  +    D  TY+ ++   CK + L  A+ LL
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 211/448 (47%), Gaps = 8/448 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    +     C+  R  +A A++    R G +PD V Y  +I A C         T+L
Sbjct: 174 TTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLL 233

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M   G + DV T++ ++ G      +  +  L+D M+  G  P V +Y  L+  L ++
Sbjct: 234 NEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRV 293

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            + DEA  +   +   +L      FN ++ G         A  ++  +   G  P+  TY
Sbjct: 294 RQADEARAMLGRV--PELN--VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTY 349

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           +IL+ GLCK GR+ +A  +L+E+   G APN +TYT ++    +N  +     +L  M  
Sbjct: 350 SILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG T +  GY  +I A  K GR+ EA   +++M + G   DI SYNT+I   C   ++E 
Sbjct: 410 KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEE 469

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  + + + ++G   +  T+  +I  L + G  + A    + M   G   ++ +YN ++ 
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            + KDG +D ++ + E M  K    ++ +Y+ ++  LCK +R+  A +L    L  G+  
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                  +++GL   G    A  +  K+
Sbjct: 590 DIVTYNTLINGLCKMGWMHAALNLLEKL 617



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 196/386 (50%), Gaps = 2/386 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+  A  ++ +  + G  P+VVTY +++ ++C+   +D    +L  M   G++ +
Sbjct: 356 LCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              YN +I    ++  +  ++ L+ EM   G  PD+ SYN++++ L    + +EA  +F+
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +++   +     T+N +++ L ++    +A+R+ + +  HG   ++V+YN LIK +CK G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  +  +L+E+ + G  PN ++Y  ++    + R+ +  LE+   M  +G   D   Y 
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE-MEK 315
           T+I    K+G +  A + +E++  + V  DI++YN LI+ +CK   L+ A +LL+  M  
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAA 655

Query: 316 QGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
                D+    IL D   K   + K + L+    N+   +  LE     +D   K G + 
Sbjct: 656 VCPVGDRRIMQILPDKNFKLYLHTKDSYLYCSRANECKANILLEQSTSFIDSAPKVGGVS 715

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCK 400
            +I+   ++       +SS + +LC+
Sbjct: 716 LSIDPGPAVGSTSILCFSSGISDLCR 741



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 114/221 (51%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+++  N  +   CK  R+++A  +I +    G  PD+ +YN +I   C     +    +
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              + E G+  + +TYN++I    R+     ++ L  EM+  G   DV SYN L+  + +
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D +  + ++M    + P   ++NI+++ LCK R   +AL + + +   G  P++VT
Sbjct: 534 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVT 593

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           YN LI GLCK G +  A  +L++L +    P+ ITY  ++ 
Sbjct: 594 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 153/357 (42%), Gaps = 37/357 (10%)

Query: 96  SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIM 153
           +L LLD++    G+ P   SYN ++  L +     +A  +++ M+  D + P T TF + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
              LC+    + AL + RG+ +HG VP+ V Y  +I  LC  G +  A  +L E+   G 
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           A +  T+  +++      + +    ++  M  KG       Y  ++    ++ +  EA  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M+    +L++V +NT+I     EGKL  A  L + M  +G + D +T++IL+ GLC
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
           K G I  A   L  M K GF                      A NV          TY+ 
Sbjct: 358 KLGRISSAVRLLREMEKKGF----------------------APNVV---------TYTI 386

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++H+ CK         LL      G+ +       ++  L   G   EA  +  ++R
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 443



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 99/195 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C   ++E+AE +  + +  GV+ + +TYN +I A  +   +     +   M  
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G S DVV+YN LI    ++  +  SL LL+EM E GI P+  SYN L+  L +  +  +
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 574

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M+   L P   T+N ++NGLCK  +   AL +   L      P+++TYNILI 
Sbjct: 575 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634

Query: 191 GLCKAGRLRTARWIL 205
             CK   L  A  +L
Sbjct: 635 WHCKVRLLDDAAMLL 649



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  R+  A  +    +  G+ PD+VTYN LI+  C+     A   +L ++  
Sbjct: 560 NILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHN 619

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
             + PD++TYN LI+   +  LL  +  LL+  +    P
Sbjct: 620 ENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCP 658


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 210/449 (46%), Gaps = 39/449 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-- 68
           N  +  F +ANRLEKA   +     +G++P+VVTYN +I  YC     +    +L+ M  
Sbjct: 284 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPS 343

Query: 69  ----------------------------------REAGISPDVVTYNSLIAGATRNSLLS 94
                                             +E G+  D VTYN+LI   T++    
Sbjct: 344 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHAD 403

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIM 153
            +L  L +  E G   D   Y++++H L + G+  EA  +  +M+  G   P   T+  +
Sbjct: 404 EALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 463

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NG C+    D A ++ + +  HG+ P  V+Y  L+ GLC+ G+   AR ++    +   
Sbjct: 464 VNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWW 523

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +PN+ITY+ +M    +  K     +++  M  KG+         ++ +  + GR  EA  
Sbjct: 524 SPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 583

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           +ME+ +  G  +++V++ T+I+ +C+  +L+AA  +LD+M       D +T+T L+D L 
Sbjct: 584 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALG 643

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS--FTY 391
           K G I  A   ++ M   G D     Y  ++ R  +  K+D  + + E M ++      Y
Sbjct: 644 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIY 703

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + ++  LC   +L  A KLL   L++  R
Sbjct: 704 NQVIEKLCGLGKLEEADKLLGKVLRTASR 732



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 182/387 (47%), Gaps = 6/387 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D + Y  +++   +         +L  M+  GI      +  ++   +R   L  +L +L
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M   G+ P++   N+ +    +  + ++A R  + M    + P   T+N M+ G C  
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAIT 219
              + A+ +   +   G +P+ V+Y  ++  LCK  R+   R ++K++  + G   + +T
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    ++      L  L   + KG+  D  GY  ++ A  K GR+ EA D + +M+
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448

Query: 280 TDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           + G    D+V+Y  ++N +C+ G+++ A  LL  M   G++ +  ++T L++GLC+ G  
Sbjct: 449 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSM 394
             AR  +    +  +  N   Y+ ++  L K+GK+  A +V   M +K  F      + +
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLL 568

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRI 421
           + +LC+  R   A K +  CL  G  I
Sbjct: 569 LQSLCRDGRTHEARKFMEECLNKGCAI 595



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 162/369 (43%), Gaps = 69/369 (18%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++ D VTYN LI    +    D     L    E G   D V Y++++    +   +S +
Sbjct: 381 GLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEA 440

Query: 97  LDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            DL++EML  G  PPDV +Y ++++   +LG+ D+A ++ Q M      P T ++  +LN
Sbjct: 441 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLN 500

Query: 156 GLCK----------------NRYTDNALR---MFRGLQKHG----------------FVP 180
           GLC+                  ++ N++    +  GL+K G                F P
Sbjct: 501 GLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFP 560

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             V  N+L++ LC+ GR   AR  ++E  + G A N + +TT++    +N +    L +L
Sbjct: 561 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 620

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK- 299
             M       D F Y T++ A  K GR+ EAT+ M++M+  G+    V+Y T+I+ YC+ 
Sbjct: 621 DDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 680

Query: 300 --------------------------------EGKLEAAYLLLDEMEKQGFECDKYTHTI 327
                                            GKLE A  LL ++ +     D  T   
Sbjct: 681 EKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYA 740

Query: 328 LIDGLCKAG 336
           L++G  K G
Sbjct: 741 LMEGYLKIG 749



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 6/299 (2%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ML  L K +    A R+   +++ G       +  ++    +AG+LR A  +L  +  +G
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN +   T +    R  + +  L  L  M+  G   +   Y  +I  +  + R++EA 
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDG 331
           + ++ M + G   D VSY T++   CKE ++     L+ +M K+ G   D+ T+  LI  
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHM 395

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----- 386
           L K  +   A   L+   + GF  +   Y+ IV  L K+G++  A ++   M  K     
Sbjct: 396 LTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           D  TY+++V+  C+   +  A KLL      G +    +  A+++GL  +G   EA+++
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREM 514



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 4/168 (2%)

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y  D   Y +++    K    + A   +  M   G+     ++  ++  Y + G+L  A 
Sbjct: 206 YRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDAL 265

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L  M++ G E +       ID   +A  ++ A   LE M  +G   N+  YNC++   
Sbjct: 266 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 325

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
               +++ AI + + M  K    D  +Y +++  LCK KR+     L+
Sbjct: 326 CDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 373


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 218/454 (48%), Gaps = 25/454 (5%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C++ R ++A  ++   ++LG + +  + N L+ A  +   F    T+L  M+E  I
Sbjct: 277 ISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDI 336

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG------------IPPDVWSYNSLMHC 121
            P+VVT+  LI     N L  C    +DE LE+             + PDV +YN+L+  
Sbjct: 337 QPNVVTFGILI-----NHL--CKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDG 389

Query: 122 LFQLGKPDEANRVFQDMICGDL-TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           L ++G+ +E   + + M       P T T+N +++G CK    + A  +F  + K G  P
Sbjct: 390 LCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VT N L+ G+CK GR+  A     E+   G   NA+TYT +++        +  +E+ 
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M   G + D   Y T+I+   + G+L  A+  + +M   G   DIVS+N LIN +C++
Sbjct: 510 DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRK 569

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
            KL+ AY +L EME  G + D  T+  LI    K G+   A   ++ M K G    +  Y
Sbjct: 570 NKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTY 629

Query: 361 NCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
             ++     +G +D A+ +F  M        ++  Y+ ++++LC+  ++  A  L+    
Sbjct: 630 GALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             GV+   +   A+  GL+      +A ++  ++
Sbjct: 690 VKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 199/414 (48%), Gaps = 15/414 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    +A   ++   ++ +   + + P+VVT+ +LI+  C+F   D    +  +M  
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368

Query: 71  AG-----ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP---PDVWSYNSLMHCL 122
                  + PDV+TYN+LI G  +       L L++ M     P   P+  +YN L+   
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQ--PRCMPNTVTYNCLIDGY 426

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +    + A  +F  M    + P   T N +++G+CK+   + A+  F  +Q  G     
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTY  LI+  C    +  A  +  E+ ++G +P+AI Y T++    +  K      +LS 
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK  G++ D   +  +I  F +  +L EA + +++M   G++ D V+YNTLI+ + K G 
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 361
              A+ L+ +M K+G      T+  LI   C  GN+  A ++  +  +      N   YN
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            +++ L +  ++D A+++ + M+VK    ++ T+++M   L +   L  A +L+
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELM 720



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 10/392 (2%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++++  E  + P+ +    LI+   R+     + D+L  ++++G   +  S N+L+  L 
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR---GLQKHGFV- 179
           +  +    N +  +M   D+ P   TF I++N LCK R  D AL +F    G + +GF+ 
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376

Query: 180 -PELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 237
            P+++TYN LI GLCK GR      +++ +       PN +TY  ++    +    +   
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           E+   M + G   +     T++    K GR+  A ++  +M   G++ + V+Y  LI  +
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C    +E A  L DEM + G   D   +  LI GL +AG +  A   L  M + GF  ++
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            ++N +++   +  K+D A  + + ME      D  TY++++ +  K     +A +L+  
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +K G+        A++     +G   EA KI
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 150/327 (45%), Gaps = 1/327 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA+ +E A  +     + GV P+VVT N L+D  C+    +      N M+ 
Sbjct: 420 NCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQG 479

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + VTY +LI      + +  +++L DEMLE G  PD   Y +L+  L Q GK D 
Sbjct: 480 KGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDR 539

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ V   M     +P   +FN+++NG C+    D A  M + ++  G  P+ VTYN LI 
Sbjct: 540 ASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLIS 599

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YT 249
              K G   TA  ++K++   G  P  +TY  ++     N      ++I   M       
Sbjct: 600 HFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP 659

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I +  +  ++  A   M+ M   GV+ +  ++N +     ++  L  A+ L
Sbjct: 660 PNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFEL 719

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAG 336
           +D M +     D  T  IL + L   G
Sbjct: 720 MDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 166/359 (46%), Gaps = 20/359 (5%)

Query: 116 NSLMHCLFQLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALR----- 168
           N L+  LF+ G+ D+A  +  +M+    +  P + T +I+ + L K      A+      
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 169 -MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            +     +H   P  +    LI  LC++GR   A  +L  L   G    A +   ++   
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM---VTDG-- 282
            R R++K    +L+ MK      +   +  +I    K  R+ EA +  E+M    ++G  
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIKG 340
           V+ D+++YNTLI+  CK G+ E    L++ M  Q   C  +  T+  LIDG CKA  I+ 
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQP-RCMPNTVTYNCLIDGYCKASMIEA 434

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           AR   + MNK G   N+   N +VD + K G+I+ A+  F  M+ K    ++ TY++++ 
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             C    +  A +L    L++G          ++ GL  +G    A  + SK++ A  S
Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           +  +C    L++A  I  D      V P+ V YN+LI++ C+    D   ++++ M+  G
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           + P+  T+N++  G    + LS + +L+D M E    PD  +   L   L  +G+
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 204/448 (45%), Gaps = 28/448 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   +  G  P    +N L+  YC    +   Y + NRM   G  P 
Sbjct: 316 FLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPG 375

Query: 77  VVTYNSLIAGA------TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            V YN  I             LL  +  + +EML      +  +  +   CL  +GK ++
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ ++M+     P  +T+  ++  LC+ +  D A  +F+ ++K G  P++ TY ILI 
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CKAG +  A+    E+  +G +PN +TYT ++    ++++     +I   M       
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP 555

Query: 251 DGFGYCTVIAAFVKIGRLKEATD----------------YMEQMVTDGVQLDIVSYNTLI 294
           +   Y  +I    K G +++A +                Y E   TD +  ++V+Y  L+
Sbjct: 556 NAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALV 615

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CK  K+  A+ LLD M   G E ++  +  L+DG CK G I  A+     M K G+ 
Sbjct: 616 NGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYL 675

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASK 409
            ++  Y  ++DR+ KDG++D A+ V   M +KDS      TY++MV  LCK      A  
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCNPNVVTYTAMVDGLCKTGETEKALN 734

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           LL    K G         A++DGL  +G
Sbjct: 735 LLSLMEKKGCSPNVVTYTALIDGLGKAG 762



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 166/365 (45%), Gaps = 16/365 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + EKA  I+ + +R G +PD  TY  +I   CQ    D  + +   M++ G++PD
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  +    DEM   G  P+V +Y +L+H   +  +  +AN +F 
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRM----------------FRGLQKHGFVP 180
            M+     P   T++ +++GLCK      A  +                F G       P
Sbjct: 547 RMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISP 606

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  L+ GLCKA ++  A  +L  +  +G  PN I Y  ++    +  +     E+ 
Sbjct: 607 NVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF 666

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + GY      Y ++I    K GRL  A   + QM+ D    ++V+Y  +++  CK 
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKT 726

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ E A  LL  MEK+G   +  T+T LIDGL KAG +         M   G   N   Y
Sbjct: 727 GETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTY 786

Query: 361 NCIVD 365
             +++
Sbjct: 787 RILIN 791



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 23/418 (5%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C+A R++KA  +  +  ++GV PDV TY +LID++C+    +   +  + MR AG
Sbjct: 458 VITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG 517

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP+VVTY +L+    ++  L  + D+   M+     P+  +Y++L+  L + G+  +A 
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKAC 577

Query: 133 RVFQDMI----------------CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V+  +I                   ++P   T+  ++NGLCK +   +A  +   +   
Sbjct: 578 EVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAA 637

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ L+ G CK G + +A+ +   +   G+ P+  TYT+++   F++ +  L 
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M +     +   Y  ++    K G  ++A + +  M   G   ++V+Y  LI+ 
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDG 757

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K GK++A   L  +M+ +G   +  T+ ILI+  C AG +  A L L+ M +  +   
Sbjct: 758 LGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKY 817

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKL 410
           L+ Y   V    K  +   ++ + E ME  D+      Y  ++ +  KA RL +A +L
Sbjct: 818 LQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALEL 873



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 5/345 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           + P+VVTY  L++  C+       + +L+ M  AG  P+ + Y++L+ G  +   +  + 
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++   M + G  P V +Y SL+  +F+ G+ D A +V   M+     P   T+  M++GL
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK   T+ AL +   ++K G  P +VTY  LI GL KAG++     +  ++   G APN 
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY  ++  C           +L  MK+  +     GY T +  F K  R   +   +E+
Sbjct: 784 VTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEE 841

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD---KYTHTILIDGLCK 334
           M +         Y  LI+ + K G+LE A  L  EM +     +   K  HT LI  LC 
Sbjct: 842 MESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCL 901

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           +  ++ A      M + G   +L A+ C+V  L +  K + A+ +
Sbjct: 902 SSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 169/395 (42%), Gaps = 13/395 (3%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L R+++ G  P  VTYN+L+        +  +  +  EM   G   D  +  S    L +
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCK 251

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+  +A  + +     D    T     M++GL +    + A+     ++ + ++P +VT
Sbjct: 252 EGRWGDALDLLERE---DFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVT 308

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  K  +L   + I+  +   G  P+   + +++        Y    ++ + M 
Sbjct: 309 YRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMN 368

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLDIVSYNTLINLYC 298
             G       Y   I +      L        A    E+M+     L+ ++        C
Sbjct: 369 TCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLC 428

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             GK E A+ ++ EM ++GF  D  T+T +I  LC+A  +  A L  + M K+G + ++ 
Sbjct: 429 GVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVY 488

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D   K G I+ A + F+ M       +  TY++++H   K+K+L  A+ +    
Sbjct: 489 TYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +            A++DGL  +G  ++A ++ +K+
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL 583



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 36/306 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   ++ A+ + +   + G LP V TY  LID   +    D    +L++M +   +P+
Sbjct: 653 FCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPN 712

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +++ G  +      +L+LL  M + G  P+V +Y +L+  L + GK D    +F 
Sbjct: 713 VVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFM 772

Query: 137 DMICGDLTPCTATFNIMLNGLC---------------KNRYTDNALRMFRG--------- 172
            M      P   T+ I++N  C               K  +    L+ +R          
Sbjct: 773 QMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRF 832

Query: 173 ---------LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT---Y 220
                    ++ H   P    Y +LI    KAGRL TA  + KE+ +   + N  +   +
Sbjct: 833 LASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMH 892

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T++++    + + +  + + S M+R+G   D   +  ++   ++  +  EA      +  
Sbjct: 893 TSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQ 952

Query: 281 DGVQLD 286
           +GV  +
Sbjct: 953 EGVNWE 958



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 94/437 (21%), Positives = 166/437 (37%), Gaps = 53/437 (12%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L R RE      VV     + GA R+  L     L  E  ++G       Y++L   L 
Sbjct: 91  FLRRYREFLTDSVVVA----VLGAVRSPELCVRFFLWAER-QVGYKHTGACYDALAEVLG 145

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                  A R+ +++   D        N+++   C       AL     L+  G+ P  V
Sbjct: 146 FEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAV 205

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-- 241
           TYN L++ L  AG++  A  + KE+  SG   +  T  +  +   +  ++   L++L   
Sbjct: 206 TYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLERE 265

Query: 242 ------------------------------AMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
                                          M+   Y  +   Y T++  F+K  +L   
Sbjct: 266 DFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWC 325

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +  M+T+G       +N+L++ YC       AY L + M   G       + I I  
Sbjct: 326 KRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGS 385

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD---------GKIDHAINVFES 382
           +C    +    L L+   K+ ++  L A +C+++++            GK + A  + + 
Sbjct: 386 ICGREELPNPEL-LDLAEKV-YEEMLVA-SCVLNKINTANFARCLCGVGKFEKAFQIVKE 442

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M     V D+ TY+ ++  LC+AKR+  A  L     K GV         ++D    +G 
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502

Query: 439 RREAKKIQSKIRMAKIS 455
             +A+    ++R A  S
Sbjct: 503 IEQAQSWFDEMRSAGCS 519


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 178/367 (48%), Gaps = 8/367 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P   TYN LI A C+          L+ M  +G  PD  T+NSLI G  R   L  + DL
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +M   G   D  SY +L+    + G+ DEA  +F++M   D+     T   ++ GLC 
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMY----THAALVKGLCD 242

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               +  L M + +++ G+ P    Y  L+   C+  +   A  IL E+ DSG  P  +T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            T ++    R  +    + +  +M+ KG   + + Y  ++  F   G++ +A   ++QM 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+YN LI   C +G + +A+ LL  ME  G   D+YT+ +LID LCK G + 
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    + +   G   N   +N +++ L K GK D A    E+M       D++TYS  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 396 HNLCKAK 402
            NLCK K
Sbjct: 483 ENLCKTK 489



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           + +TR     V  +C+  + E+AE I+ +    G++P VVT  ++++AYC+         
Sbjct: 262 RPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVR 321

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   MR  G  P+V TYN+++ G      +  ++ LLD+M E G+ PDV +YN L+    
Sbjct: 322 VFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G    A R+ + M    L     T+N++++ LCK    D A  +F GL+  G  P  V
Sbjct: 382 IDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N +I GLCKAG+   A   L+ +  +G+AP+  TY+  ++   + +  + GL  +  M
Sbjct: 442 TFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM 501

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            +K        Y  VI           AT    QMV+ G   D+V+Y T +  YC EG+L
Sbjct: 502 LQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRL 561

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  ++ EM+K     D   +  LIDG    G    A   L++M  +    N   +  +
Sbjct: 562 DEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFIL 621

Query: 364 VDRLGKDGKIDH----AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           +  L +    +H    A +V++++E+ D F     +  L K   +PS+++  LS L+
Sbjct: 622 LRHLLQRRLAEHVPLKATSVWKTIELADVFE----LFELMKKNSVPSSARTYLSILE 674



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 198/457 (43%), Gaps = 35/457 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   L  A+  +   +R G  PD  T+N LI  YC+    +  + +  +M  
Sbjct: 133 NALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPF 192

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-------------------------- 104
            G S D V+Y +LI G      +  +L+L  EM                           
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCM 252

Query: 105 -----EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
                E+G  P   +Y +L+    +  K +EA ++  +M    L PC  T  I++N  C+
Sbjct: 253 LQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCR 312

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+R+F  ++  G  P + TYN +++G C AG++  A  +L ++ + G  P+ +T
Sbjct: 313 EGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVT 372

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  +++    +        +L  M+  G   D + Y  +I A  K G++ EA    + + 
Sbjct: 373 YNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G++ + V++NT+IN  CK GK + A   L+ M   G+  D YT++  I+ LCK    +
Sbjct: 433 YRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQ 492

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
                ++ M +     +   Y  +++RL  +     A  ++  M  +    D  TY++ V
Sbjct: 493 EGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSV 552

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
              C   RL  A  ++    K    +   A   ++DG
Sbjct: 553 RAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDG 589



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 203/456 (44%), Gaps = 22/456 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            I V  +C+  R+  A   + + +R  G  P+V TYN ++  +C          +L++MR
Sbjct: 304 TIVVNAYCREGRMSGA-VRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G+ PDVVTYN LI G   +  +  +  LL  M   G+  D ++YN L+  L + GK D
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  +    + P + TFN ++NGLCK    D A      +   G+ P+  TY+  I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           + LCK    +   + + E+      P+ + YT ++   F  R Y L   I   M  +G +
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T + A+   GRL EA + + +M      +D ++YNTLI+ +   G+ + A  +
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTI 602

Query: 310 LDEMEKQGFECDKYTHTILI----------------DGLCKAGNIKGARLHLEYMNKIGF 353
           L  M       + +T  IL+                  + K   +       E M K   
Sbjct: 603 LKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSV 662

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
            S+   Y  I++   ++ ++D   ++   M+ +    +   Y+++V+  CK +    A  
Sbjct: 663 PSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWA 722

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           LL S +  G        + ++ GL   G    AK+I
Sbjct: 723 LLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEI 758



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 4/379 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E+   ++     LG  P    Y  L+D +C+    +    ILN M ++G+ P 
Sbjct: 240 LCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPC 299

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT   ++    R   +S ++ + + M   G  P+VW+YN+++      GK  +A  +  
Sbjct: 300 VVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLD 359

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+N+++ G C + +  +A R+ R ++ +G   +  TYN+LI  LCK G
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  +   L   G  PN++T+ T++    +  K+ +    L  M   GY  D + Y 
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYS 479

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
             I    K    +E   ++++M+   V+   V+Y  +IN    E     A  +  +M  Q
Sbjct: 480 PFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQ 539

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+T  +   C  G +  A   +  M K     +  AYN ++D     G+ D A
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRA 599

Query: 377 INVFESM----EVKDSFTY 391
           + + + M     + + FT+
Sbjct: 600 VTILKHMTGVASMPNHFTF 618



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 156/409 (38%), Gaps = 53/409 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N+ +   CK  ++++A   + DG+   G+ P+ VT+N +I+  C+   FD   T L  M 
Sbjct: 409 NVLIDALCKTGKVDEA-CSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMI 467

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            AG +PD  TY+  I    +       L  +DEML+  + P   +Y  +++ LF      
Sbjct: 468 SAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYG 527

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A R++  M+    +P   T+   +   C     D A  +   ++K   + + + YN LI
Sbjct: 528 LATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITY--------------TTIMKCCFRNRKYKL 235
            G    G+   A  ILK +      PN  T+                 +K     +  +L
Sbjct: 588 DGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIEL 647

Query: 236 G--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
               E+   MK+         Y +++  F +  RL E T  +  M  + + L+   YN L
Sbjct: 648 ADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGF----------------------------------- 318
           +N +CK      A+ LL  M   GF                                   
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEY 767

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
             D+    ++IDG  + G+       +  + ++    + E Y  + + L
Sbjct: 768 NTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 8/241 (3%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           AP   TY  +++   R    +     LS M R G+  D F + ++I  + +  +L+ A D
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M   G   D VSY  LI  +C+ G+++ A  L  EM +     D YTH  L+ GLC
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQP----DMYTHAALVKGLC 241

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSF 389
            AG  +     L+ M ++G+     AY  +VD   ++ K + A  +    F+S  +    
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           T + +V+  C+  R+  A ++  S    G         A+V G  ++G   +A  +  ++
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 450 R 450
           R
Sbjct: 362 R 362


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 228/461 (49%), Gaps = 29/461 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   CK  +++ AE I+    R G  PDV++YN LID +C+     +   +L  +R
Sbjct: 59  FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118

Query: 70  EAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEM-LEMGI-----PPDVWSYNSLMH 120
            +      PD+V++NSL  G ++       + +LDE+ + MG+      P+V +Y++ + 
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              + G+   A + F  M    L+P   TF  +++G CK    + A+ +++ +++     
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  LI G CK G ++ A  +   + +    PN++ YTTI+   F+       ++ L
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +G   D   Y  +I+     G+LKEAT+ +E M    +  D+V + T++N Y K 
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LEYMNKIGFDSNLE 358
           G+++AA  +  ++ ++GFE D    + +IDG+ K G +  A ++  +E  N +       
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV------- 404

Query: 359 AYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D L K+G       +F    E+  V D F Y+S +  LCK   L  A KL    
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           ++ G+ +   A   ++ GL   G   EA+++  ++  + IS
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 157/346 (45%), Gaps = 5/346 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  LE A ++  +  R+ +  +VVTY  LID +C+         + +RM E  + P+
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            + Y ++I G  +      ++  L +ML  G+  D+ +Y  ++  L   GK  EA  + +
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM   DL P    F  M+N   K+     A+ M+  L + GF P++V  + +I G+ K G
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A              N + YT ++    +   +     + S +   G   D F Y 
Sbjct: 388 QLHEAIVYF-----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYT 442

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           + IA   K G L +A     +MV +G+ LD+++Y TLI     +G +  A  + DEM   
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           G   D     +LI    K GN+  A   L  M + G  + +   +C
Sbjct: 503 GISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 184/386 (47%), Gaps = 8/386 (2%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L+R+R++   PD  T N  I     ++    SL  L  ++  G  P   S+NS++  + 
Sbjct: 8   FLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVC 67

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFV--P 180
           +LG+   A  +   M      P   ++N +++G C+N    +A  +   L+  HGF+  P
Sbjct: 68  KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++V++N L  G  K   L    ++   +     +PN +TY+T +    ++ + +L L+  
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
            +MKR   + +   +  +I  + K G L+ A    ++M    + L++V+Y  LI+ +CK+
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+++ A  +   M +   E +   +T +IDG  + G+   A   L  M   G   ++ AY
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             I+  L  +GK+  A  + E ME    V D   +++M++   K+ R+ +A  +    ++
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREA 442
            G      A   ++DG+  +G   EA
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEA 392



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 41/293 (13%)

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +R A   L  L  S + P+  T    +     +    L L+ L+ +  +GYT     + +
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQ 316
           V++   K+G++K A D +  M   G + D++SYN+LI+ +C+ G + +A L+L+ +    
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 317 GFEC------------------------------------DKYTHTILIDGLCKAGNIKG 340
           GF C                                    +  T++  ID  CK+G ++ 
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVH 396
           A      M +     N+  + C++D   K G ++ A+++++ M  V+ S    TY++++ 
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             CK   +  A ++    ++  V         ++DG    G    A K  +K+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 5/244 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L      + +   C   +L++A  I+ D  +  ++PD+V +  +++AY +     A   
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + +++ E G  PDVV  +++I G  +N  L  ++      +E     DV  Y  L+  L 
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA--NDVM-YTVLIDALC 414

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   E  R+F  +    L P    +   + GLCK     +A ++   + + G + +L+
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y  LI GL   G +  AR +  E+ +SG +P++  +  +++   +        ++L  M
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534

Query: 244 KRKG 247
           +R+G
Sbjct: 535 QRRG 538


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 188/389 (48%), Gaps = 39/389 (10%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  + P+VV Y+M+ID  C+    D  Y +   M   GISPDVVTY+ L++G      L+
Sbjct: 191 RWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLN 250

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++DLL+EM+   I PD+++Y  L+  L + GK  EA  V   M+   +      ++ ++
Sbjct: 251 RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G C     +NA R+F  + + G  P++  Y+I+I GLCK  R+  A  + +E+      
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +TYT                                   ++I    K GR+    D 
Sbjct: 371 PDTVTYT-----------------------------------SLIDCLCKSGRISYVWDL 395

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M+  G   D+++YN LI+  CK G L+ A  L ++M+ Q    + YT TIL+DGLCK
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
            G +K A    + +   G+  N+  Y  +++ L K+G +D A+ +   ME    + D+ T
Sbjct: 456 VGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVT 515

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  M+           A KL+   +  G+
Sbjct: 516 FEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 203/417 (48%), Gaps = 4/417 (0%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PD  T N++I+ +C F      ++ ++++ + G  P+ +T N+L+ G      +  +L
Sbjct: 89  VEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEAL 148

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
              D++L  G      SY  L++ + ++G+   A R+ + +    + P    ++++++ L
Sbjct: 149 RFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRL 208

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+   D A  ++  +   G  P++VTY+IL+ G C  G+L  A  +L E+      P+ 
Sbjct: 209 CKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDI 268

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TYT ++    +  K K    +L+ M +     D   Y T++  +  +  +  A      
Sbjct: 269 YTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYT 328

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   GV  D+  Y+ +IN  CK  +++ A  L +E+ ++    D  T+T LID LCK+G 
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
           I       + M   G   ++  YN ++D L K+G +D AI +F  M+ +    + +T++ 
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++  LCK  RL +A +     L  G  +       +++GL   G   EA  +QS++ 
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 179/396 (45%), Gaps = 4/396 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   +  N M     +P    +N ++           ++ L  +M    + PD ++ N +
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C    G+   A      ++     P T T N ++ GLC       ALR    +   GF
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
               ++Y ILI G+CK G  R A  +L+ +      PN + Y+ I+    ++       +
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + + M  KG + D   Y  +++ F  +G+L  A D + +MV + +  DI +Y  L++  C
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC 279

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEGK++ A  +L  M K     D   ++ L+DG C    +  A+     M ++G   ++ 
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVH 339

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y+ +++ L K  ++D A+N+FE +     V D+ TY+S++  LCK+ R+     L    
Sbjct: 340 CYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEM 399

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           L  G          ++D L  +G    A  + +K++
Sbjct: 400 LDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 197/394 (50%), Gaps = 15/394 (3%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           +VV Y+ ++D  C+  +      I   M E GI P+V+TYN +I G       S +  LL
Sbjct: 79  NVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLL 138

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M+E  I PDV ++++L++   + GK   A  ++++M+  ++ P T T++ M++G CK+
Sbjct: 139 RDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKH 198

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA-----------GRLRTARWILKELG 209
              ++A  MF  +   G  P+++T N LI G C+A           G +  A+ + +E+ 
Sbjct: 199 SRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMI 258

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            +G +P+ +T  T++     N K +  LE+    ++     D      +I    K  ++ 
Sbjct: 259 SNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVD 318

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA D    +  +GV+ D+V+YN LI ++ KEG    A  +  EM  +G      T+  ++
Sbjct: 319 EAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMV 378

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 385
           DG CK   ++ AR  ++ M   G   ++  ++ ++    K G++D  + +F  M     V
Sbjct: 379 DGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLV 438

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            D+ TY++++H  CK   L  A  +    + SGV
Sbjct: 439 ADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 201/428 (46%), Gaps = 26/428 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK     KA+ I  +    G+ P+V+TYN +ID YC +  +     +L  M E  I PD
Sbjct: 90  LCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPD 149

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+++LI    +   +S + +L  EML   I P   +Y+S++    +  + ++A  +F 
Sbjct: 150 VVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFD 209

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRY-----------TDNALRMFRGLQKHGFVPELVTY 185
            M+    +P   T N +++G C+ +             + A  +F+ +  +G  P++VT 
Sbjct: 210 LMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTC 269

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N L+ GLC+ G+L  A  + K    S    +  T   I+    +  K     ++ +++  
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPV 329

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   Y  +I  FVK G    A D   +M+  G+    V+YN++++ +CK+ +LE 
Sbjct: 330 NGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEE 389

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  ++D M  +G   D  T + LI G CKAG +         M + G  ++   YN ++ 
Sbjct: 390 ARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIH 449

Query: 366 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K G ++ A ++FE M       D+ T+ SM+  LC               L+ G+ +
Sbjct: 450 GFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAE-----------LQKGLTM 498

Query: 422 LKSAQKAV 429
           L+  QK+V
Sbjct: 499 LEDLQKSV 506



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 173/353 (49%), Gaps = 12/353 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  ++  AE +  + +R  + P  +TY+ +ID +C+    +    + + M   G SPD
Sbjct: 160 FVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD 219

Query: 77  VVTYNSLIAGATRNSL-----------LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++T N+LI G  R              ++ + DL  EM+  G+ PD+ + N+L+  L + 
Sbjct: 220 IITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCEN 279

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK ++A  +F+      +   TAT NI++NG+CK    D A  +F  L  +G   ++VTY
Sbjct: 280 GKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTY 339

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NILI    K G    A  I  E+   G  P+ +TY +++    +  + +   +++ +M  
Sbjct: 340 NILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS 399

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G + D   + T+I  + K GR+ +  +   +M   G+  D ++YN LI+ +CK G L  
Sbjct: 400 EGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNG 459

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           A  + +EM   G   D  T   ++ GLC    ++     LE + K   D  LE
Sbjct: 460 AQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK-SVDHELE 511



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 179/393 (45%), Gaps = 15/393 (3%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E G   +VVT+ +L+ G  R   +  +L L+D M+E G  PD  +Y ++++ + +LG 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A  + + M    +      ++ +++ LCK+     A  +F  + + G  P ++TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I G C  G+   A  +L+++ +    P+ +T++ ++    +  K     E+   M R+ 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-----------L 296
                  Y ++I  F K  RL++A    + MV+ G   DI++ NTLI+            
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +C+ G +  A  L  EM   G   D  T   L+ GLC+ G ++ A    +   K   D +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
               N I++ + K  K+D A ++F S+ V     D  TY+ ++    K      A  + L
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             L  G+        ++VDG        EA+++
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQM 393



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 117/235 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+  +LEKA  +     +  +  D  T N++I+  C+    D  + + N +  
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPV 329

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  DVVTYN LI    +      + D+  EML  GI P   +YNS++    +  + +E
Sbjct: 330 NGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEE 389

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M+    +P   TF+ ++ G CK    D+ L +F  + + G V + +TYN LI 
Sbjct: 390 ARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIH 449

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           G CK G L  A+ I +E+  SG  P+ IT+ +++       + + GL +L  +++
Sbjct: 450 GFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 208/448 (46%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+VTYN ++ A C+  + D     L +M  
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 285

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN+LI G +       ++ +  EM    I PDV + + LM  L + GK  E
Sbjct: 286 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 345

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++NIMLNG        +   +F  +   G  P+  T+N+LIK
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  P+ +TY T++    R  K    +E  + M  +G   
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G L +A + + +++ +G+ LDIV ++++IN  CK G++  A  + 
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G   D   + +L+DG C  G ++ A    + M   G + N+  Y  +V+   K 
Sbjct: 526 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 585

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  M  +     +  YS ++  L +A R   A        +SG+ +     
Sbjct: 586 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTY 645

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             V+ GL  + C  EA  +  ++R   +
Sbjct: 646 NIVLRGLFKNRCFDEAIFLFKELRAMNV 673



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 195/425 (45%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  +++  N L++ +C+    D    IL +R  E G 
Sbjct: 124 CT--RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGC 181

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y+ L+           + DLL  M E G    P+V +YN+++   F+ G  ++A
Sbjct: 182 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 241

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T+N +++ LCK R  D A    R +     +P   TYN LI G
Sbjct: 242 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 301

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T + +M    +  K K   ++   M  KG   D
Sbjct: 302 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 361

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  D  ++N LI  Y   G L+ A ++ +
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 421

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G + D  T+  +I  LC+ G +  A      M   G   +  AYNC++      G
Sbjct: 422 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 481

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   +SS+++NLCK  R+  A  +    +  G+        
Sbjct: 482 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 541

Query: 428 AVVDG 432
            ++DG
Sbjct: 542 MLMDG 546



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 211/447 (47%), Gaps = 39/447 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L++ + + CK  ++++A  +       G  PDV +YN++++ Y           + + M 
Sbjct: 330 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 389

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+PD  T+N LI       +L  ++ + +EM + G+ PDV +Y +++  L ++GK D
Sbjct: 390 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 449

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A   F  MI   + P    +N ++ G C +     A  +   +  +G   ++V ++ +I
Sbjct: 450 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 509

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GR+  A+ I     + G  P+A+ Y  +M                         
Sbjct: 510 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD------------------------ 545

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               GYC V       G++++A    + MV+ G++ ++V Y TL+N YCK G+++    L
Sbjct: 546 ----GYCLV-------GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 594

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM ++G +     ++I+IDGL +AG    A++    M + G   ++  YN ++  L K
Sbjct: 595 FREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFK 654

Query: 370 DGKIDHAINVFE---SMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +   D AI +F+   +M VK +  T ++M+  + + +R+  A  L  S  +S +      
Sbjct: 655 NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVT 714

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMA 452
              ++  L   G   EA+ + S ++ A
Sbjct: 715 YSIMITNLIKEGLVEEAEDMFSSMQNA 741



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 165/379 (43%), Gaps = 35/379 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +  +     L+KA  I  +    GV PDVVTY  +I A C+    D      N+M 
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 70  EAGISPDVVTYNSLIAG-ATRNSLLS---------------------------CSL---- 97
           + G++PD   YN LI G  T  SLL                            C L    
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              ++ D  + +G+ PD   YN LM     +GK ++A RVF  M+   + P    +  ++
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D  L +FR + + G  P  + Y+I+I GL +AGR   A+    E+ +SG A
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +  TY  +++  F+NR +   + +   ++      +     T+I    +  R++EA D 
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              +    +   +V+Y+ +I    KEG +E A  +   M+  G E +      ++  L K
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759

Query: 335 AGNIKGARLHLEYMNKIGF 353
              I  A  +L  +++  F
Sbjct: 760 KNEIVRAGAYLSKIDERNF 778



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 155/326 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC    L KA+ +I + +  G+  D+V ++ +I+  C+         I +    
Sbjct: 471 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 530

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD V YN L+ G      +  +L + D M+  GI P+V  Y +L++   ++G+ DE
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 590

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F++M+   + P T  ++I+++GL +   T  A   F  + + G   ++ TYNI+++
Sbjct: 591 GLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 650

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K      A ++ KEL       N IT  T++   F+ R+ +   ++ +++ R     
Sbjct: 651 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 710

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I   +K G ++EA D    M   G + +    N ++    K+ ++  A   L
Sbjct: 711 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYL 770

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAG 336
            +++++ F  +  T  +L+D     G
Sbjct: 771 SKIDERNFSLEHLTAMLLVDLFSSKG 796



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P   +Y  LM C  +  +P+ A   F  ++   L       N +L G C+ + TD AL
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +Y+IL+K LC  G+   A  +L+ + + G   +PN + Y T++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV   V 
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +  +YN LI  Y   G+ + A  +  EM +     D  T ++L+  LCK G IK AR  
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 345 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 370
            + M   G + ++ +YN          C+VD            +  D             
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 371 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK D  TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEI 493



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 5/196 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L +I +    +A R   A+    +    G+  D+ TYN+++    +   FD    
Sbjct: 604 KPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 663

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  +++T N++I G  +   +  + DL   +    + P V +Y+ ++  L 
Sbjct: 664 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 723

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  +EA  +F  M      P +   N ++  L K      A      + +  F  E +
Sbjct: 724 KEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 783

Query: 184 TYNILI-----KGLCK 194
           T  +L+     KG C+
Sbjct: 784 TAMLLVDLFSSKGTCR 799


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 209/449 (46%), Gaps = 30/449 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   +  G  P+   +N L+ +YC    +   Y +LNRM   G  P 
Sbjct: 87  FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 146

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            V YN  I        L  S DLLD       EML      +  +  +   CL  +GK D
Sbjct: 147 YVVYNIFIGSICGQEKLP-SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 205

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++ ++M+     P T+T++ ++  LC     + A  +F+ ++  G  P++ TY ILI
Sbjct: 206 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 265

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
              CKAG +  A+W+ +E+   G +P  +TYT ++    + ++     +I   M   G  
Sbjct: 266 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 325

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLD--------------IVSYNTL 293
            +   Y  ++    K G + +A +   +++  +D    D              +V+Y  L
Sbjct: 326 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 385

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK  K++ A+ LLD M   G E +   +  LIDG CKAG I  A+     M K G+
Sbjct: 386 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 445

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSAS 408
             ++  Y  ++DR+ KDG++D A+ V   M +KDS      TY++M+  LC+      A 
Sbjct: 446 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTAMIDGLCRIGESEKAL 504

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           KLL    + G         A++DGL  +G
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAG 533



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 204/418 (48%), Gaps = 23/418 (5%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C A ++EKA  +  +   +GV PDV TY +LID++C+    +    +   MR  G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP VVTY +LI    +   +  + D+   M++ G  P+  +Y +L+  L + G   +A 
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 133 RVFQDMI-------------CGD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V+  +I             C D   L P   T+  +++GLCK    D+A  +   +   
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI G CKAG++ +A+ +  ++   G+ P+  TYT+++   F++ +  L 
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 468

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M +   T +   Y  +I    +IG  ++A   +  M   G   ++V+Y  LI+ 
Sbjct: 469 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 528

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K GK++ +  L  +M ++G   +  T+ +LI+ LC AG +  ARL L  M +  +   
Sbjct: 529 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 588

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
           L+ Y C +    K      ++ + E ME    V  +  Y  ++    KA RL  A +L
Sbjct: 589 LQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 644



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 16/376 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + +KA  +I + +R G +PD  TY+ +I   C     +  + +   M+  G++PD
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  +  L +EM  +G  P V +Y +L+H   +  +  +AN +F 
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL----------------QKHGFVP 180
            M+     P   T+  +++GLCK      A  ++  L                 +H   P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  L+ GLCKA ++  A  +L  +  SG  PN I Y  ++    +  K     E+ 
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + GY      Y ++I    K GRL  A   + QM+ D    ++V+Y  +I+  C+ 
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ E A  LL  ME++G   +  T+T LIDGL KAG I  +      M++ G   N   Y
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557

Query: 361 NCIVDRLGKDGKIDHA 376
             +++ L   G +D A
Sbjct: 558 RVLINHLCAAGLLDKA 573



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 194/464 (41%), Gaps = 61/464 (13%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC--------------- 53
           L N  V ++C       A  ++      G  P  V YN+ I + C               
Sbjct: 114 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 173

Query: 54  -------------------QFV-------SFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
                               F         FD  + ++  M   G  PD  TY+ +I   
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 233

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
              + +  +  L  EM  +G+ PDV++Y  L+    + G  ++A  +F++M     +P  
Sbjct: 234 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+  +++   K +    A  +F  +   G  P  VTY  L+ GLCKAG +  A  +  +
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 208 L---GDSGH-------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           L    DS               APN +TY  ++    +  K     E+L AM   G   +
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I  F K G++  A +   QM   G    + +Y +LI+   K+G+L+ A  +L 
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M K     +  T+T +IDGLC+ G  + A   L  M + G   N+  Y  ++D LGK G
Sbjct: 474 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           KID ++++F  M  K    +  TY  ++++LC A  L  A  LL
Sbjct: 534 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 577



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 8/349 (2%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  + P+VVTY  L+D  C+    D  + +L+ M  +G  P+ + Y++LI G  +   + 
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++  +M + G  P V +Y SL+  +F+ G+ D A +V   M+    TP   T+  M+
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLC+   ++ AL++   +++ G  P +VTY  LI GL KAG++  +  +  ++   G +
Sbjct: 492 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 551

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           PN +TY  ++   C      K  L +L  MK+  +     GY   I  F K      +  
Sbjct: 552 PNYVTYRVLINHLCAAGLLDKARL-LLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLG 608

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDG 331
            +E+M + G       Y  LI+ + K G+LE A  L  EM +     + D   +  LI  
Sbjct: 609 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 668

Query: 332 LCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           LC A  ++ A RL+ E M + GF   L  + C++  L +  K D A+ +
Sbjct: 669 LCLASQVEEAFRLYSE-MTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 141/346 (40%), Gaps = 48/346 (13%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T     + LCK     +AL M   +++  F  + V    +I GL +A     A   L  +
Sbjct: 12  TVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             +   PN +TY T++    + ++      I++ M  +G   +   + +++ ++      
Sbjct: 69  RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKE---------------------------- 300
             A   + +M T G     V YN  I   C +                            
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188

Query: 301 -------------GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
                        GK + A+ L+ EM ++GF  D  T++ +I  LC A  ++ A L  + 
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           M  +G   ++  Y  ++D   K G I+ A  +FE M          TY++++H   KAK+
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +P A+ +    + +G R       A+VDGL  +G   +A ++ +K+
Sbjct: 309 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA +++ +  +     R G  P+ VTY +LI+  C     D    +L  M++      + 
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y   I G +++ +   SL +L+EM   G  P    Y  L+ C  + G+ + A  + ++M
Sbjct: 591 GYRCAIQGFSKSFI--ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648

Query: 139 ICGDLTPCTATFNIM----LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +  ++     T N M    +  LC     + A R++  + + GFVPEL  +  LIKGL +
Sbjct: 649 M--EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 706

Query: 195 AGRLRTA 201
             +   A
Sbjct: 707 VKKWDEA 713



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 100/274 (36%), Gaps = 53/274 (19%)

Query: 227 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           CF +   K G   + L  ++R+ +  D      +I+  ++     EA  ++ +M  +   
Sbjct: 15  CFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 74

Query: 285 LDIVSYNT-----------------------------------LINLYCKEGKLEAAYLL 309
            ++V+Y T                                   L++ YC E     AY L
Sbjct: 75  PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M   G       + I I  +C    +    L L+   KI     + A NC+++++  
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDL-LDLAEKIY--GEMLAANCVLNKVNV 191

Query: 370 D---------GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
                     GK D A  + + M     V D+ TYS ++  LC A ++  A  L      
Sbjct: 192 ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            GV         ++D    +G   +A+ +  ++R
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 199/416 (47%), Gaps = 6/416 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C   +L+KA  I+    R G +P +V+YN L+   C+   F     +++ M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME 237

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI  DV TYN  I    RNS  +    +L +M    I P+  SYN+L++   + GK  
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A RVF +MI  +L+P   T+NI++NG C N   + ALR+   ++ +   P  VT   L+
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLL 357

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL K+ +   AR IL+    +  + N I++T ++    RN       ++L  M + G  
Sbjct: 358 NGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVY 417

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  +I  F K+G L +A + M ++  +G   + V ++TLI   CK G +      
Sbjct: 418 PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKF 477

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M   G   D +T   L+  LC+ G +  A   L ++++IG   N   ++CI++    
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGV 419
            G    A +VF+ M         FTY S++  LCK +    A KLL  L C+   V
Sbjct: 538 VGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV 593



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 14/354 (3%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           S +   ++ LI    R  ++  +++    ML  G  P V++ N +M  + +  +      
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M+   + P  ++FNI+++ LC       A+ +   ++++G+VP +V+YN L+   C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A  ++  +   G   +  TY   +    RN +   G  +L  M+ K  T +  
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  FVK G++  AT    +M+   +  ++++YN LIN YC  G  E A  LLD M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI-----VDRLG 368
           E      ++ T   L++GL K+     AR  LE      +  N  + NCI     +D L 
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILER-----YSINRTSLNCISHTVMIDGLC 396

Query: 369 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++G +D A  +   M       D  T+S +++  CK   L  A +++    + G
Sbjct: 397 RNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREG 450



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 181/382 (47%), Gaps = 10/382 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P V T NM++ +  +       +    +M  + + P+V ++N LI+       L  +
Sbjct: 135 GFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKA 194

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +++L  M   G  P + SYN+L+    + G+   A  +   M C  +     T+N+ ++ 
Sbjct: 195 VNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDS 254

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+N  +     + + ++     P  V+YN LI G  K G++  A  +  E+ +   +PN
Sbjct: 255 LCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY  ++     N  ++  L +L  M+      +     T++    K  +   A + +E
Sbjct: 315 LITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILE 374

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +   +   L+ +S+  +I+  C+ G L+ A+ LL EM K G   D  T ++LI+G CK G
Sbjct: 375 RYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVG 434

Query: 337 NIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           N+  A+   E M+KI   GF  N   ++ ++    K G +   +  + +M +     D+F
Sbjct: 435 NLNKAK---EVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNF 491

Query: 390 TYSSMVHNLCKAKRLPSASKLL 411
           T +S+V +LC+  +L  A + L
Sbjct: 492 TCNSLVASLCENGKLVEAEEFL 513



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 184/400 (46%), Gaps = 5/400 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +++ ++ID  C+    D  + +L  M + G+ PD++T++ LI G  +   L+ + +++ +
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSK 445

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +   G  P+   +++L++   ++G   E  + +  M          T N ++  LC+N  
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A      + + G VP  VT++ +I G    G    A  +  ++   GH P+  TY +
Sbjct: 506 LVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGS 565

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++K   + + +    ++L  +       D   Y T+I    K G L EA    E+M+ + 
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           +  D  +Y  +++   +EG+L  A++ L   M+K+    +   +T  IDGL KAG  K A
Sbjct: 626 ILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAA 685

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHN 397
               + M + G   +L A N I D   + GK+  A ++      K+      T++ ++H 
Sbjct: 686 LYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG 745

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             + + + S  KL     +SG    +    +++ GL + G
Sbjct: 746 YSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 185/423 (43%), Gaps = 7/423 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   L KA+ ++    R G +P+ V ++ LI   C+  +   G      M   G + D
Sbjct: 430 FCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNAD 489

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T NSL+A    N  L  + + L  +  +G+ P+  +++ +++    +G    A  VF 
Sbjct: 490 NFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFD 549

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI     P   T+  +L  LCK +    A ++ + L       + ++YN LI  + K+G
Sbjct: 550 KMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSG 609

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDGFGY 255
            L  A  + +E+  +   P++ TYT I+    R  +       L   M+++  T +   Y
Sbjct: 610 NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVY 669

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
              I    K G+ K A    ++M   G+ LD+++ N++ + Y + GK+ +A  L+ +   
Sbjct: 670 TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T  IL+ G  +  +I         M + GF  N   Y+ ++  L   G ++ 
Sbjct: 730 KNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLEL 789

Query: 376 AINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            I +      ES  + D  T++ ++   C+   L     L  +     V + K  QKAV 
Sbjct: 790 GIKMLKMFIAESSTI-DDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 431 DGL 433
           D L
Sbjct: 849 DVL 851



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/475 (20%), Positives = 195/475 (41%), Gaps = 75/475 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V + C+  +L +AE  +    R+G++P+ VT++ +I+ Y         +++ ++M  
Sbjct: 494 NSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMIS 553

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P   TY SL+    +      +  LL ++  + +  D  SYN+L+  + + G   E
Sbjct: 554 CGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 131 ANRVFQDMICGDLTPCTATFNIML------------------------------------ 154
           A R+F++MI  ++ P + T+  +L                                    
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 155 NGLCKNRYTDNALRMFRGLQKHGF-----------------------------------V 179
           +GL K   +  AL +F+ +++ G                                    +
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P L T+NIL+ G  +   + +   +   +  SG  PN +TY +++     +   +LG+++
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L     +  T D   +  +I    +I  L +  D    M    V LD  +   + ++  +
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
               +  ++ + EM K+GF      +  ++  +C+ G+I+GA    + M  +G   +  A
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
              +V  L   GKI+ A+ + + M    ++  + T+++++H  CK      A  L
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 71/429 (16%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR-MR 69
            N  +    K+  L +A  +  + I+  +LPD  TY  ++    +       +  L R M+
Sbjct: 599  NTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQ 658

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +  ++ + + Y   I G  +      +L L  EM E G+  D+ + NS+     ++GK  
Sbjct: 659  KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVF 718

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
             A+ +       ++ P   TFNI+L+G  + +   +  +++  +++ GF P  +TY+ LI
Sbjct: 719  SASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLI 778

Query: 190  KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRN------------RKYKLG 236
             GLC  G L     +LK         + +T+  ++ KCC  N              +++ 
Sbjct: 779  LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 237  LE----------------------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            L+                       +  M +KG+      YCT++    ++G ++ A   
Sbjct: 839  LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 275  MEQMVTDGVQLD-----------------------------------IVSYNTLINLYCK 299
             +QMV  G+ LD                                     ++ TL++++CK
Sbjct: 899  KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 300  EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            +   + A+ L   ME    + D   + +LI   C  G++  A    E + + G   N+  
Sbjct: 959  KDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTT 1018

Query: 360  YNCIVDRLG 368
            Y  +V  + 
Sbjct: 1019 YRVLVSAIS 1027



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 150/339 (44%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            + +  ++  A ++I       V+P++ T+N+L+  Y +     + + + N MR +G  P+
Sbjct: 711  YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             +TY+SLI G   + +L   + +L   +      D  ++N L+    ++   D+   +  
Sbjct: 771  RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTH 830

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +M    ++    T   + + L +   + N       + K GF+P    Y  ++K +C+ G
Sbjct: 831  NMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVG 890

Query: 197  RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             ++ A  +  ++   G + +      +++      K +  + IL  M R         + 
Sbjct: 891  DIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFT 950

Query: 257  TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            T++  F K    KEA +    M    V+LDIV+YN LI+  C  G +  A    +E++++
Sbjct: 951  TLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQK 1010

Query: 317  GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            G   +  T+ +L+  +     +    + L+ +N  G  S
Sbjct: 1011 GLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVS 1049


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 209/449 (46%), Gaps = 30/449 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   +  G  P+   +N L+ +YC    +   Y +LNRM   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            V YN  I        L  S DLLD       EML      +  +  +   CL  +GK D
Sbjct: 212 YVVYNIFIGSICGQEKLP-SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++ ++M+     P T+T++ ++  LC     + A  +F+ ++  G  P++ TY ILI
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
              CKAG +  A+W+ +E+   G +P  +TYT ++    + ++     +I   M   G  
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLD--------------IVSYNTL 293
            +   Y  ++    K G + +A +   +++  +D    D              +V+Y  L
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK  K++ A+ LLD M   G E +   +  LIDG CKAG I  A+     M K G+
Sbjct: 451 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSAS 408
             ++  Y  ++DR+ KDG++D A+ V   M +KDS      TY++M+  LC+      A 
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           KLL    + G         A++DGL  +G
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAG 598



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 204/418 (48%), Gaps = 23/418 (5%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C A ++EKA  +  +   +GV PDV TY +LID++C+    +    +   MR  G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP VVTY +LI    +   +  + D+   M++ G  P+  +Y +L+  L + G   +A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 133 RVFQDMI-------------CGD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V+  +I             C D   L P   T+  +++GLCK    D+A  +   +   
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI G CKAG++ +A+ +  ++   G+ P+  TYT+++   F++ +  L 
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M +   T +   Y  +I    +IG  ++A   +  M   G   ++V+Y  LI+ 
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K GK++ +  L  +M ++G   +  T+ +LI+ LC AG +  ARL L  M +  +   
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
           L+ Y C +    K      ++ + E ME    V  +  Y  ++    KA RL  A +L
Sbjct: 654 LQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 709



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 16/376 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + +KA  +I + +R G +PD  TY+ +I   C     +  + +   M+  G++PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  +  L +EM  +G  P V +Y +L+H   +  +  +AN +F 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL----------------QKHGFVP 180
            M+     P   T+  +++GLCK      A  ++  L                 +H   P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  L+ GLCKA ++  A  +L  +  SG  PN I Y  ++    +  K     E+ 
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + GY      Y ++I    K GRL  A   + QM+ D    ++V+Y  +I+  C+ 
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ E A  LL  ME++G   +  T+T LIDGL KAG I  +      M++ G   N   Y
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 361 NCIVDRLGKDGKIDHA 376
             +++ L   G +D A
Sbjct: 623 RVLINHLCAAGLLDKA 638



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 194/464 (41%), Gaps = 61/464 (13%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC--------------- 53
           L N  V ++C       A  ++      G  P  V YN+ I + C               
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 54  -------------------QFV-------SFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
                               F         FD  + ++  M   G  PD  TY+ +I   
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
              + +  +  L  EM  +G+ PDV++Y  L+    + G  ++A  +F++M     +P  
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+  +++   K +    A  +F  +   G  P  VTY  L+ GLCKAG +  A  +  +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 208 L---GDSGH-------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           L    DS               APN +TY  ++    +  K     E+L AM   G   +
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I  F K G++  A +   QM   G    + +Y +LI+   K+G+L+ A  +L 
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M K     +  T+T +IDGLC+ G  + A   L  M + G   N+  Y  ++D LGK G
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           KID ++++F  M  K    +  TY  ++++LC A  L  A  LL
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 8/349 (2%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  + P+VVTY  L+D  C+    D  + +L+ M  +G  P+ + Y++LI G  +   + 
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++  +M + G  P V +Y SL+  +F+ G+ D A +V   M+    TP   T+  M+
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLC+   ++ AL++   +++ G  P +VTY  LI GL KAG++  +  +  ++   G +
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 616

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           PN +TY  ++   C      K  L +L  MK+  +     GY   I  F K      +  
Sbjct: 617 PNYVTYRVLINHLCAAGLLDKARL-LLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLG 673

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDG 331
            +E+M + G       Y  LI+ + K G+LE A  L  EM +     + D   +  LI  
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 332 LCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           LC A  ++ A RL+ E M + GF   L  + C++  L +  K D A+ +
Sbjct: 734 LCLASQVEEAFRLYSE-MTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 175/468 (37%), Gaps = 58/468 (12%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG----------------------- 72
            G  P  VTYN L+         D G+ +   M E+G                       
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 93

Query: 73  ---------ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
                       D V    +I+G    S    ++  L  M      P+V +Y +L+    
Sbjct: 94  ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  +     R+   M+     P  + FN +++  C  +    A ++   +   G  P  V
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 213

Query: 184 TYNILIKGLCKAGRLRT------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            YNI I  +C   +L +      A  I  E+  +    N +      +C     K+    
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +++  M RKG+  D   Y  VI       ++++A    ++M   GV  D+ +Y  LI+ +
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK G +E A  L +EM   G      T+T LI    KA  +  A      M   G   N 
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDS----------------FTYSSMVHN 397
             Y  +VD L K G I  A  V+  +    +  DS                 TY ++V  
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 453

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           LCKA ++  A +LL + L SG         A++DG   +G    A+++
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 15/395 (3%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +++ G  P  VTYN+L+   +    +     +  EM E G   D ++     H L + 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 126 GK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           G+  D  + + ++    D   CT     M++GL +  Y D A+     ++ +  +P +VT
Sbjct: 89  GRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  K  +L   + I+  +   G  PN   + +++      + Y    ++L+ M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLDIVSYNTLINLYC 298
             G       Y   I +     +L        A     +M+     L+ V+        C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             GK + A+ L+ EM ++GF  D  T++ +I  LC A  ++ A L  + M  +G   ++ 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D   K G I+ A  +FE M          TY++++H   KAK++P A+ +    
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +G R       A+VDGL  +G   +A ++ +K+
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA +++ +  +     R G  P+ VTY +LI+  C     D    +L  M++      + 
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y   I G +++ +   SL +L+EM   G  P    Y  L+ C  + G+ + A  + ++M
Sbjct: 656 GYRCAIQGFSKSFI--ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 139 ICGDLTPCTATFNIM----LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +  ++     T N M    +  LC     + A R++  + + GFVPEL  +  LIKGL +
Sbjct: 714 M--EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771

Query: 195 AGRLRTA 201
             +   A
Sbjct: 772 VKKWDEA 778



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 58/328 (17%)

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           L+  G+ P  VTYN L++ L  AG++     + KE+ +SG   +  T       CF +  
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVG-----CFAHAL 85

Query: 233 YKLG--LEILSAMKRKGYTFDG-----------------------------------FGY 255
            K G   + L  ++R+ +  D                                      Y
Sbjct: 86  CKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+++ F+K  +L      +  M+T+G   +   +N+L++ YC E     AY LL+ M  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD----- 370
            G       + I I  +C    +    L L+   KI     + A NC+++++        
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDL-LDLAEKIY--GEMLAANCVLNKVNVANFARC 262

Query: 371 ----GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
               GK D A  + + M     V D+ TYS ++  LC A ++  A  L       GV   
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                 ++D    +G   +A+ +  ++R
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMR 350



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 11/175 (6%)

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A D  + +   G +   V+YN L+ +    G+++  + +  EM + GF  D++T      
Sbjct: 24  AGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAH 83

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            LCK G    A   L+ + +  F  +      ++  L +    D A++    M     + 
Sbjct: 84  ALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           +  TY +++    K K+L    +++   +  G     +   ++ + L HS C  +
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGC----NPNPSLFNSLVHSYCNEK 191


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 173/338 (51%), Gaps = 39/338 (11%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV Y+ +IDA C++      Y + + M   GIS DVVTY++LI G      L  ++ L
Sbjct: 197 PNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGK-----------------PD------------- 129
           L+EM+   I P+V++YN L+  L + GK                 PD             
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 130 -----EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                +A  VF  M    +TP   T+ I++NG CKN+  D AL +F+ + +   VP +VT
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ LI GLCK+GR+     ++ E+ D G   N ITY++++    +N      + + + MK
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   + F +  ++    K GRLK+A +  + ++T G  L++ +YN +I+ +CK+G LE
Sbjct: 437 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLE 496

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCK----AGNI 338
            A  +L +ME  G   D  T  I+I  L K     GN+
Sbjct: 497 EALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNV 534



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 208/419 (49%), Gaps = 6/419 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD++T N+LI+ +C       G+++L ++ + G  PD VT N+LI G      +  +
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
           L   D++L  G   +  SY +L++ + ++G    A ++ Q  I G LT P    ++ +++
Sbjct: 149 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQK-IDGRLTKPNVVMYSTIID 207

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK +    A  +F  +   G   ++VTY+ LI G C  G+L+ A  +L E+      P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TY  ++    +  K K    +L+ M +     D   Y T++  +  +  +K+A    
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M   GV  D+ +Y  LIN +CK   ++ A  L  EM ++       T++ LIDGLCK+
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G I      ++ M+  G  +N+  Y+ ++D L K+G +D AI +F  M+ +    ++FT+
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  LCK  RL  A ++    L  G  +       ++DG    G   EA  + SK+ 
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 191/406 (47%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC   ++    +++   ++ G  PD VT N LI   C            +++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   + V+Y +LI G  +      ++ LL ++      P+V  Y++++  L +     
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +M    ++    T++ ++ G C       A+ +   +      P + TYNIL+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G+++ A+ +L  +  +   P+ ITY+T+M   F   + K    + +AM   G T
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  F K   + EA +  ++M    +   IV+Y++LI+  CK G++   + L
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +DEM  +G   +  T++ LIDGLCK G++  A      M   G   N   +  ++D L K
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            G++  A  VF+ +  K    + +TY+ M+   CK   L  A  +L
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTML 502



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 187/398 (46%), Gaps = 4/398 (1%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           + D   +  NRM     +P ++ +N ++    +    S ++ L   +   GI PD+ + N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            L++C   +G+      V   ++     P T T N ++ GLC       AL     L   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           GF    V+Y  LI G+CK G  R A  +L+++      PN + Y+TI+    + +     
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             + S M  KG + D   Y T+I  F   G+LKEA   + +MV   +  ++ +YN L++ 
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CKEGK++ A  +L  M K   + D  T++ L+DG      +K A+     M+ +G   +
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLL 412
           +  Y  +++   K+  +D A+N+F+ M  K+      TYSS++  LCK+ R+P    L+ 
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                G         +++DGL  +G    A  + +K++
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMK 436



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 3/236 (1%)

Query: 100  LDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L   LE+ GI PD+++ N L++C   +G+      +   ++     P T TF  ++NGLC
Sbjct: 948  LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007

Query: 159  KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                 + AL     L   GF    V+Y  LI G+CK G  R A  +L+++      P+ +
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVV 1067

Query: 219  TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
             Y TI+    +++       +   M  KG + D   Y T+I  F  +G+LKEA   + +M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127

Query: 279  VTDGVQLDIVSYNTLINLYCKEGK--LEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            V   +  ++ +YN L++  CKEGK  L+ +  +L +ME  G + +  T  I+I  L
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 8/266 (3%)

Query: 161  RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            ++   A+ +   L+  G  P+L T NILI   C  G++     IL ++   G+ P+ IT+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 221  TTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            TT++   C + +  K  L     +  +G+  +   Y T+I    KIG  + A   + ++ 
Sbjct: 1000 TTLINGLCLKGQVNK-ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 280  TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                + D+V YNT+I+  CK   +  AY L  EM  +G   D  T+  LI G C  G +K
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 340  GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK--IDHAINVFESME----VKDSFTYSS 393
             A   L  M     + N+  YN +VD L K+GK  +D ++++   ME      ++ T+  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 394  MVHNLCKAKRLPSASKLLLSCLKSGV 419
            ++  L +        KLL   +  G+
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 123/250 (49%), Gaps = 4/250 (1%)

Query: 37   GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            G+ PD+ T N+LI+ +C        ++IL ++ + G  PD +T+ +LI G      ++ +
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 97   LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
            L   D++L  G   +  SY +L++ + ++G    A ++ +  I G LT P    +N +++
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK-IDGRLTKPDVVMYNTIID 1074

Query: 156  GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             LCK++    A  +F  +   G   ++VTYN LI G C  G+L+ A  +L ++      P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 216  NAITYTTIMKCCFRNRKYKL--GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            N  TY  ++    +  K  L   L +LS M+  G   +   +  +I+A  +     +   
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 274  YMEQMVTDGV 283
             + +M+  G+
Sbjct: 1195 LLHEMIARGL 1204



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 2/240 (0%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            LNI +  FC   ++    +I+   ++ G  PD +T+  LI+  C     +      +++ 
Sbjct: 964  LNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLL 1023

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              G   + V+Y +LI G  +      ++ LL ++      PDV  YN+++  L +     
Sbjct: 1024 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVS 1083

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            +A  +F +M    ++    T+N ++ G C       A+ +   +      P + TYNIL+
Sbjct: 1084 KAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILV 1143

Query: 190  KGLCKAGR--LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
              LCK G+  L  +  +L ++ D+G   NA+T+  I+   F   +     ++L  M  +G
Sbjct: 1144 DALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 9    LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            + N  +   CK   + KA  +  +    G+  DVVTYN LI  +C          +LN+M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127

Query: 69   REAGISPDVVTYNSLIAGATRNS--LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
                I+P+V TYN L+    +    LL  SL +L +M + G   +  ++  ++  LF+  
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKD 1187

Query: 127  KPDEANRVFQDMIC 140
            + D+  ++  +MI 
Sbjct: 1188 ENDKVEKLLHEMIA 1201



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T    I +   CK  RL+ A+ +  D +  G   +V TYN++ID +C+    +   T+L
Sbjct: 443 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTML 502

Query: 66  NRMREAGISPDVVTYNSLI 84
           ++M + G  PD VT+  +I
Sbjct: 503 SKMEDNGCIPDAVTFEIII 521


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 214/433 (49%), Gaps = 4/433 (0%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           + + A ++  + ++   +P +V +  ++    +   FD    + ++M   GIS D+ ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI    R S LS +L LL +M+++G  P + +  SL++   Q  +  EA  +   M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
              P    +N ++NGLCKNR  +NAL +F  ++K G   + VTYN LI GL  +GR   A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L+++      PN I +T ++    +         +   M R+    + F Y ++I  
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F   G L +A    + MV+ G   D+V+YNTLI  +CK  ++E    L  EM  QG   D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            +T+  LI G C+AG +  A+     M   G   ++  YN ++D L  +GKI+ A+ + E
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            ++      D  TY+ ++  LC+  +L  A  L  S  + GV+    A   ++ GL   G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 438 CRREAKKIQSKIR 450
            +REA K+  +++
Sbjct: 479 LQREADKLCRRMK 491



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 200/388 (51%), Gaps = 1/388 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC+ +RL  A A++   ++LG  P +VT   L++ +CQ   F    ++++ M 
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+VV YN++I G  +N  L+ +L++   M + GI  D  +YN+L+  L   G+  
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DM+   + P    F  +++   K      A  +++ + +   VP + TYN LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C  G L  A+++   +   G  P+ +TY T++    ++++ + G+++   M  +G  
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T+I  + + G+L  A     +MV  GV  DIV+YN L++  C  GK+E A ++
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +++++K   + D  T+ I+I GLC+   +K A      + + G   +  AY  ++  L +
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHN 397
            G    A  +   M+ +D F  S  +++
Sbjct: 477 KGLQREADKLCRRMK-EDGFMPSERIYD 503



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 4/226 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L  A+ +    +  G  PDVVTYN LI  +C+    + G  +   M   G+  D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G  +   L+ +  + + M++ G+ PD+ +YN L+ CL   GK ++A  + +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D+   ++     T+NI++ GLC+      A  +FR L + G  P+ + Y  +I GLC+ G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             R A  + + + + G  P+   Y   +    R+    L  E++ A
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKA 520



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           IV +  ++ +  K  K +    L  +ME  G   D Y+ TILI   C+   +  A   L 
Sbjct: 79  IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 138

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            M K+GF  ++     +++   +  +   A+++ +SM+    V +   Y+++++ LCK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            L +A ++     K G+R        ++ GL +SG   +A ++   +   KI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 229/483 (47%), Gaps = 49/483 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  + K  R + A  I+ D  + G+  D+ TYN++ID  C+       Y +L RMRE
Sbjct: 268 NTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ++PD  +YN+LI G      ++ ++ + ++ML   + P V +Y +L+    + G+ DE
Sbjct: 328 VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDE 387

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV  +M    + P   T++ +LNG CK+     AL + + L+          Y ILI 
Sbjct: 388 ARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILID 447

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL-----EILSAMKR 245
           G C+ G +  A+ ILK +   G  P+ ITY+ ++     N   K+G+     EILS M++
Sbjct: 448 GFCQLGEVSKAKQILKCMLADGIDPDVITYSALI-----NGMCKMGMIHETKEILSRMQK 502

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYM------------------------EQMVTD 281
            G   +   Y T++  F K G  KEA  Y                         E M+ +
Sbjct: 503 SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAE 562

Query: 282 GVQ-----------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
             Q            D+ S+N +I+ YC+ G +  A+ + D M + G+  D  T+  L+ 
Sbjct: 563 AEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLR 622

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLC+ G++  A+  + Y+ +     + +  N ++  + K G +D A+++ E M  +    
Sbjct: 623 GLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILP 682

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           D++TY+ ++   CK  ++  A  LL   L+ G+     A   +++GL + G  + A  + 
Sbjct: 683 DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 742

Query: 447 SKI 449
            +I
Sbjct: 743 QEI 745



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 208/436 (47%), Gaps = 5/436 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   +L KAE+++   ++   LP+ VTYN +++ Y +     +   IL+ M +
Sbjct: 234 NIVLNSLCTQGKLSKAESML-QKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  D+ TYN +I    +    + +  LL  M E+ + PD  SYN+L+H  F  GK + 
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M+   L P  AT+  +++G C+N  TD A R+   +Q  G  P  +TY+ L+ 
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLN 412

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK  +L  A  ++K L     + N   YT ++    +  +     +IL  M   G   
Sbjct: 413 GYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP 472

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I    K+G + E  + + +M   GV  + V Y TL+  +CK G  + A    
Sbjct: 473 DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 532

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            ++ + G   +   H  L+    + G I  A    +YM+++    ++ ++NCI+D   + 
Sbjct: 533 VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 592

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  A +V+++M       D  TY S++  LC+   L  A + ++  L+    I +   
Sbjct: 593 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 652

Query: 427 KAVVDGLRHSGCRREA 442
             ++ G+   G   EA
Sbjct: 653 NTLLVGICKHGTLDEA 668



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 194/441 (43%), Gaps = 40/441 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F    ++  A  I    +R  + P V TY  LID YC+    D    +L  M+ 
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P  +TY++L+ G  ++S L  +LDL+  +    I  +   Y  L+    QLG+  +
Sbjct: 398 TGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSK 457

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + M+   + P   T++ ++NG+CK         +   +QK G +P  V Y  L+ 
Sbjct: 458 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 517

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CKAG  + A     ++  SG   N++ +  ++   +R        +    M R   +F
Sbjct: 518 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 577

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-------------------- 290
           D   +  +I ++ + G + EA    + MV  G   DI +Y                    
Sbjct: 578 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637

Query: 291 ---------------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                          NTL+   CK G L+ A  L ++M  +    D YT+TIL+DG CK 
Sbjct: 638 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 697

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFT 390
           G +  A + L+ M + G   +  AY C+++ L  +G++  A  +F+ +  K     D   
Sbjct: 698 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 757

Query: 391 YSSMVHNLCKAKRLPSASKLL 411
           Y+SM++   K  ++    +L+
Sbjct: 758 YNSMMNGYLKGGQINEIERLM 778



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 209/452 (46%), Gaps = 27/452 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +C+F +   + +AE       R+ +  DV ++N +ID+YCQ  +    +++ + M  
Sbjct: 548 NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 607

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+ TY SL+ G  +   L  + + +  +LE     D  + N+L+  + + G  DE
Sbjct: 608 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 667

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M+  ++ P T T+ I+L+G CK      AL + + + + G VP+ + Y  L+ 
Sbjct: 668 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLN 727

Query: 191 GLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           GL   G+++ A ++ +E+    G   + I Y ++M    +  +      ++  M      
Sbjct: 728 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 787

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  ++  ++K G+L         MV +G++ D V+Y  LI   C+ G +E A   
Sbjct: 788 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 847

Query: 310 LDEMEKQGFECDKYTHTILIDGLCK----------------AGNIKGARLHLEYMNKIGF 353
           L++M  +G   D     ILI    +                 G+I GA    E M  +G 
Sbjct: 848 LEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGV 907

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA-- 407
             +  A + IV  L K GK++ AI VF S+     V    T+++++H LCK  ++  A  
Sbjct: 908 VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFH 967

Query: 408 -SKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
             +L+ SC   G+++       ++ GL +  C
Sbjct: 968 LKQLMESC---GLKVDVVTYNVLITGLCNKKC 996



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 182/397 (45%), Gaps = 17/397 (4%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            +  + LN  +   CK   L++A  +    +   +LPD  TY +L+D +C+         +
Sbjct: 647  IDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALIL 706

Query: 65   LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLF 123
            L  M E G+ PD + Y  L+ G      +  +  +  E++ + G+  D  +YNS+M+   
Sbjct: 707  LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 766

Query: 124  QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + G+ +E  R+ ++M   ++ P +A++NI+++G  K       L ++R + K G  P+ V
Sbjct: 767  KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826

Query: 184  TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            TY +LI GLC+ G +  A   L+++   G  P+ + +  ++K      K    L++ S M
Sbjct: 827  TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886

Query: 244  KRKGYTFDGF----------------GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            K  G     F                   +++    K G+++EA      ++  G+   I
Sbjct: 887  KWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 946

Query: 288  VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
             ++ TL++  CKE K++ A+ L   ME  G + D  T+ +LI GLC    I  A    E 
Sbjct: 947  ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEE 1006

Query: 348  MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            M   G   N+  Y  +   +   G +     + + +E
Sbjct: 1007 MKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 1043



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 194/420 (46%), Gaps = 7/420 (1%)

Query: 41  DVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           ++ + ++L++AY  +    DA   I   M E G    + + N+++      +        
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIF-FMDECGFKASLFSCNNILNALVGINKSEYVWLF 217

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L E L+   P DV + N +++ L   GK  +A  + Q M    L P   T+N +LN   K
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVK 276

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                +ALR+   ++K+G   +L TYNI+I  LCK  R   A  +LK + +    P+  +
Sbjct: 277 KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++   F   K  L + I + M R+        Y  +I  + + GR  EA   + +M 
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+   ++Y+ L+N YCK  KL  A  L+  +  +    ++  +TILIDG C+ G + 
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVS 456

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A+  L+ M   G D ++  Y+ +++ + K G I     +   M+    + ++  Y+++V
Sbjct: 457 KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLV 516

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              CKA     A K  +   +SG+        A++      G   EA++ +  +   KIS
Sbjct: 517 FYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKIS 576



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 212/503 (42%), Gaps = 93/503 (18%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  I +  FC+   + KA+ I+   +  G+ PDV+TY+ LI+  C+         IL+RM
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 69  REAGISPDVVTYNSLI-----AGATRNSL--------------------LSCSL------ 97
           +++G+ P+ V Y +L+     AG  + +L                    L CS       
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560

Query: 98  ----DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP--CT---- 147
                    M  M I  DV S+N ++    Q G   EA  V+ +M+     P  CT    
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620

Query: 148 -----------------------------ATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
                                         T N +L G+CK+   D AL +   +     
Sbjct: 621 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           +P+  TY IL+ G CK G++  A  +L+ + + G  P+ I YT ++       + K    
Sbjct: 681 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 740

Query: 239 ILSAMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +   +  ++G   D   Y +++  ++K G++ E    M  M  + V     SYN L++ Y
Sbjct: 741 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 800

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSN 356
            K+G+L     L  +M K+G + D  T+ +LI GLC+ G I+ A   LE M   G F  N
Sbjct: 801 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 860

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME--------------------VKDSFTYSSMVH 396
           L A++ ++    +  K+ +A+ +F  M+                    V      SS+V 
Sbjct: 861 L-AFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVR 919

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            LCK  ++  A  +  S +++G+
Sbjct: 920 GLCKCGKVEEAIIVFSSIMRAGM 942



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 6    STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
            S+   NI +  + K  +L +   +  D ++ G+ PD VTY +LI   C++   +     L
Sbjct: 789  SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 848

Query: 66   NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL----------------DEMLEMGIP 109
             +M   G+ PD + ++ LI   +  S +S +L L                 ++M  +G+ 
Sbjct: 849  EKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVV 908

Query: 110  PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
            P   + +S++  L + GK +EA  VF  ++   + P  ATF  +++GLCK    D+A  +
Sbjct: 909  PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL 968

Query: 170  FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
             + ++  G   ++VTYN+LI GLC    +  A  + +E+   G  PN  TY T+    + 
Sbjct: 969  KQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYA 1028

Query: 230  NRKYKLGLEILSAMKRKG 247
                + G ++L  ++ +G
Sbjct: 1029 TGTMQDGEKLLKDIEDRG 1046



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 132/305 (43%), Gaps = 17/305 (5%)

Query: 37   GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            G+  D + YN +++ Y +    +    ++  M E  + P   +YN L+ G  +   LS +
Sbjct: 750  GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 809

Query: 97   LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            L L  +M++ GI PD  +Y  L+  L + G  + A +  + M+   + P    F+I++  
Sbjct: 810  LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKA 869

Query: 157  LCKNRYTDNALRMF----------------RGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
              +     NAL++F                  ++  G VP  V  + +++GLCK G++  
Sbjct: 870  FSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 929

Query: 201  ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
            A  +   +  +G  P   T+TT+M    +  K      +   M+  G   D   Y  +I 
Sbjct: 930  AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 989

Query: 261  AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                   + +A D  E+M + G+  +I +Y TL       G ++    LL ++E +G   
Sbjct: 990  GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI-V 1048

Query: 321  DKYTH 325
              Y H
Sbjct: 1049 PSYKH 1053


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 201/428 (46%), Gaps = 39/428 (9%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           +  +  D ++LGV P+V T+N+LI  YC   + +    ++N+M E G  PD VTYN+++ 
Sbjct: 195 SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLT 254

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
              + S L+   DLL +M   G+ P+  +YN L+H   +L    EA  V + M    + P
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP 314

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              T+N M+ GLC     D A+R+   ++    VP++VTYN LI G              
Sbjct: 315 DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-------------- 360

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
                                CF +R      +++  MK +G   +G  +  +I  F   
Sbjct: 361 ---------------------CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G++ EA++ M +MV  G   D  +YNT+IN YCK GK+  AY ++DEM ++G + D +T 
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
             L+  +C    +  A        K G+  +   Y  ++    KD + D A+ ++E M+ 
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 385 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
              V    TY++++  LC + +   A   L   L+ G+   +S    ++ G    G   +
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 442 AKKIQSKI 449
           A +  +K+
Sbjct: 580 AFQFHNKM 587



 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 222/479 (46%), Gaps = 39/479 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  +C  N  E+A  +I      G  PD VTYN ++ A C+         +L +M+
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK 273

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G+ P+  TYN L+ G  +   L  + ++++ M   G+ PDVW+YN+++  L   GK D
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKID 333

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQKHG------- 177
           EA R+   M    L P   T+N +++G  ++R +D A ++      RG++++G       
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 178 -----------------------FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                                  F P+  TYN +I G CKAG++  A  ++ E+G  G  
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +  T  T++      ++      +    +++GY  D   Y T+I  + K  +   A   
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E+M   G+   I++YNT+I   C  GK + A   L+E+ ++G   D+ T  I+I G C 
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCW 573

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G ++ A      M +     ++   N ++  L ++G ++  + +F +   K    D+ T
Sbjct: 574 EGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVT 633

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+ ++ + CK +RL  A  L+       +   +    A+V GL  +G   EA+K+  K 
Sbjct: 634 YNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKF 692



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 175/362 (48%), Gaps = 36/362 (9%)

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G+ I N+M+     P+++T N+L+    R+                         NS   
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRS-------------------------NSSHS 191

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            +F       +  VFQD +   + P   TFNI+++G C +  T+ ALR+   + ++G  P
Sbjct: 192 LVF-------SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCP 244

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           + VTYN ++  LCK  +L   R +L ++ +SG  PN  TY  ++    + +  K   E++
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVI 304

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  KG   D + Y T++      G++ EA    ++M +  +  D+V+YNTLI+   + 
Sbjct: 305 ELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEH 364

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
              +AA+ L++EM+ +G + +  TH I+I   C  G I  A   +  M + GF  +   Y
Sbjct: 365 RGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTY 424

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++   K GK+  A  + + M  K    D+FT ++++H +C  K+L  A  L +   K
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484

Query: 417 SG 418
            G
Sbjct: 485 RG 486



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 202/438 (46%), Gaps = 15/438 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C   ++++A  +        ++PDVVTYN LID   +    DA + ++  M+ 
Sbjct: 320 NTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKA 379

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + VT+N +I        +  + +++ +M+E G  PD ++YN++++   + GK  E
Sbjct: 380 RGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAE 439

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++  +M    L   T T N +L+ +C  +  D+A  +    +K G++ + VTY  LI 
Sbjct: 440 AYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIM 499

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K  +   A  + +E+ ++G     ITY TI++    + K    ++ L+ +  KG   
Sbjct: 500 GYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D      +I  +   G +++A  +  +MV   ++ DI + N L+   C+EG LE    L 
Sbjct: 560 DESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +    +G   D  T+ I+I   CK   ++ A   +  M     + +   YN IV  L K 
Sbjct: 620 NTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKA 679

Query: 371 GKIDHAINVF-------ESMEVKDS--------FTYSSMVHNLCKAKRLPSASKLLLSCL 415
           G+ + A  +        + ++ +D+          YS  + +LC   +   A KL     
Sbjct: 680 GRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAE 739

Query: 416 KSGVRILKSAQKAVVDGL 433
           + GV + K     ++DGL
Sbjct: 740 QKGVSLNKYTYIKLMDGL 757



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 11/335 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA ++ +A  ++ +  R G+  D  T N L+   C     D  YT+  + R+
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D VTY +LI G  ++     +L L +EM E GI   + +YN+++  L   GK D+
Sbjct: 485 RGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQ 544

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A     +++   L P  +T NI+++G C     + A +    + +H   P++ T NIL++
Sbjct: 545 AVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLR 604

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L     +       G   + +TY  I+    + R+ +   ++++ M+ K    
Sbjct: 605 GLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEP 664

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI-----------VSYNTLINLYCK 299
           D + Y  ++    K GR +EA     +    G Q+             + Y+  I+  C 
Sbjct: 665 DRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCT 724

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +GK + A  L  + E++G   +KYT+  L+DGL K
Sbjct: 725 QGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 133/328 (40%), Gaps = 46/328 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL T  LN  + T C   +L+ A  + +   + G + D VTY  LI  Y +    D    
Sbjct: 453 KLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALK 512

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M+E GI   ++TYN++I G   +     ++D L+E+LE G+ PD  + N ++H   
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  ++A +    M+   L P   T NI+L GLC+    +  L +F      G   + V
Sbjct: 573 WEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTV 632

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR-------------- 229
           TYNI+I   CK  RL  A  ++ E+      P+  TY  I+    +              
Sbjct: 633 TYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKF 692

Query: 230 --------------------------------NRKYKLGLEILSAMKRKGYTFDGFGYCT 257
                                             KYK  +++    ++KG + + + Y  
Sbjct: 693 AEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIK 752

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQL 285
           ++   +K  +    T  +  MV+  +Q 
Sbjct: 753 LMDGLLKRRKSFTTTSLLPFMVSATIQF 780


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 209/449 (46%), Gaps = 30/449 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   +  G  P+   +N L+ +YC    +   Y +LNRM   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            V YN  I        L  S DLLD       EML      +  +  +   CL  +GK D
Sbjct: 212 YVVYNIFIGSICGQEKLP-SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++ ++M+     P T+T++ ++  LC     + A  +F+ ++  G  P++ TY ILI
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
              CKAG +  A+W+ +E+   G +P  +TYT ++    + ++     +I   M   G  
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLD--------------IVSYNTL 293
            +   Y  ++    K G + +A +   +++  +D    D              +V+Y  L
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK  K++ A+ LLD M   G E +   +  LIDG CKAG I  A+     M K G+
Sbjct: 451 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSAS 408
             ++  Y  ++DR+ KDG++D A+ V   M +KDS      TY++M+  LC+      A 
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           KLL    + G         A++DGL  +G
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAG 598



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 204/418 (48%), Gaps = 23/418 (5%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C A ++EKA  +  +   +GV PDV TY +LID++C+    +    +   MR  G
Sbjct: 294 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP VVTY +LI    +   +  + D+   M++ G  P+  +Y +L+  L + G   +A 
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413

Query: 133 RVFQDMI-------------CGD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V+  +I             C D   L P   T+  +++GLCK    D+A  +   +   
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI G CKAG++ +A+ +  ++   G+ P+  TYT+++   F++ +  L 
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M +   T +   Y  +I    +IG  ++A   +  M   G   ++V+Y  LI+ 
Sbjct: 534 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 593

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K GK++ +  L  +M ++G   +  T+ +LI+ LC AG +  ARL L  M +  +   
Sbjct: 594 LGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKY 653

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
           L+ Y C +    K      ++ + E ME    V  +  Y  ++    KA RL  A +L
Sbjct: 654 LQGYRCAIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMEL 709



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 16/376 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + +KA  +I + +R G +PD  TY+ +I   C     +  + +   M+  G++PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  +  L +EM  +G  P V +Y +L+H   +  +  +AN +F 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL----------------QKHGFVP 180
            M+     P   T+  +++GLCK      A  ++  L                 +H   P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  L+ GLCKA ++  A  +L  +  SG  PN I Y  ++    +  K     E+ 
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + GY      Y ++I    K GRL  A   + QM+ D    ++V+Y  +I+  C+ 
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ E A  LL  ME++G   +  T+T LIDGL KAG I  +      M++ G   N   Y
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 361 NCIVDRLGKDGKIDHA 376
             +++ L   G +D A
Sbjct: 623 RVLINHLCAAGLLDKA 638



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 194/464 (41%), Gaps = 61/464 (13%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC--------------- 53
           L N  V ++C       A  ++      G  P  V YN+ I + C               
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 54  -------------------QFV-------SFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
                               F         FD  + ++  M   G  PD  TY+ +I   
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
              + +  +  L  EM  +G+ PDV++Y  L+    + G  ++A  +F++M     +P  
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+  +++   K +    A  +F  +   G  P  VTY  L+ GLCKAG +  A  +  +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 208 L---GDSGH-------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           L    DS               APN +TY  ++    +  K     E+L AM   G   +
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I  F K G++  A +   QM   G    + +Y +LI+   K+G+L+ A  +L 
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M K     +  T+T +IDGLC+ G  + A   L  M + G   N+  Y  ++D LGK G
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           KID ++++F  M  K    +  TY  ++++LC A  L  A  LL
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 8/349 (2%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  + P+VVTY  L+D  C+    D  + +L+ M  +G  P+ + Y++LI G  +   + 
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++  +M + G  P V +Y SL+  +F+ G+ D A +V   M+    TP   T+  M+
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLC+   ++ AL++   +++ G  P +VTY  LI GL KAG++  +  +  ++   G +
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 616

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           PN +TY  ++   C      K  L +L  MK+  +     GY   I  F K      +  
Sbjct: 617 PNYVTYRVLINHLCAAGLLDKARL-LLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLG 673

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKYTHTILIDG 331
            +E+M + G       Y  LI+ + K G+LE A  L  EM +     + D   +  LI  
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 332 LCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           LC A  ++ A RL+ E M + GF   L  + C++  L +  K D A+ +
Sbjct: 734 LCLASQVEEAFRLYSE-MTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 175/468 (37%), Gaps = 58/468 (12%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG----------------------- 72
            G  P  VTYN L+         D G+ +   M E+G                       
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 93

Query: 73  ---------ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
                       D V    +I+G    S    ++  L  M      P+V +Y +L+    
Sbjct: 94  ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 153

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  +     R+   M+     P  + FN +++  C  +    A ++   +   G  P  V
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 213

Query: 184 TYNILIKGLCKAGRLRT------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            YNI I  +C   +L +      A  I  E+  +    N +      +C     K+    
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +++  M RKG+  D   Y  VI       ++++A    ++M   GV  D+ +Y  LI+ +
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK G +E A  L +EM   G      T+T LI    KA  +  A      M   G   N 
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM----EVKDS----------------FTYSSMVHN 397
             Y  +VD L K G I  A  V+  +    +  DS                 TY ++V  
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 453

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           LCKA ++  A +LL + L SG         A++DG   +G    A+++
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 15/395 (3%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +++ G  P  VTYN+L+   +    +     +  EM E G   D ++     H L + 
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 126 GK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           G+  D  + + ++    D   CT     M++GL +  Y D A+     ++ +  +P +VT
Sbjct: 89  GRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  K  +L   + I+  +   G  PN   + +++      + Y    ++L+ M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQMVTDGVQLDIVSYNTLINLYC 298
             G       Y   I +     +L        A     +M+     L+ V+        C
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             GK + A+ L+ EM ++GF  D  T++ +I  LC A  ++ A L  + M  +G   ++ 
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVY 324

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D   K G I+ A  +FE M          TY++++H   KAK++P A+ +    
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +G R       A+VDGL  +G   +A ++ +K+
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA +++ +  +     R G  P+ VTY +LI+  C     D    +L  M++      + 
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y   I G +++ +   SL +L+EM   G  P    Y  L+ C  + G+ + A  + ++M
Sbjct: 656 GYRCAIQGFSKSFI--ASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 139 ICGDLTPCTATFNIM----LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +  ++     T N M    +  LC     + A R++  + + GFVPEL  +  LIKGL +
Sbjct: 714 M--EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771

Query: 195 AGRLRTA 201
             +   A
Sbjct: 772 VKKWDEA 778



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 58/328 (17%)

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           L+  G+ P  VTYN L++ L  AG++     + KE+ +SG   +  T       CF +  
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVG-----CFAHAL 85

Query: 233 YKLG--LEILSAMKRKGYTFDG-----------------------------------FGY 255
            K G   + L  ++R+ +  D                                      Y
Sbjct: 86  CKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+++ F+K  +L      +  M+T+G   +   +N+L++ YC E     AY LL+ M  
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD----- 370
            G       + I I  +C    +    L L+   KI     + A NC+++++        
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDL-LDLAEKIY--GEMLAANCVLNKVNVANFARC 262

Query: 371 ----GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
               GK D A  + + M     V D+ TYS ++  LC A ++  A  L       GV   
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                 ++D    +G   +A+ +  ++R
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMR 350



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 11/175 (6%)

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A D  + +   G +   V+YN L+ +    G+++  + +  EM + GF  D++T      
Sbjct: 24  AGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAH 83

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            LCK G    A   L+ + +  F  +      ++  L +    D A++    M     + 
Sbjct: 84  ALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           +  TY +++    K K+L    +++   +  G     +   ++ + L HS C  +
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGC----NPNPSLFNSLVHSYCNEK 191


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 175/325 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ +RL  A + +   ++LG  P +VT+  L++ +C         ++++++   G  P+
Sbjct: 118 FCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPN 177

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN++I     N  +  +LD+L+ M +MGI PDV +YNSL+  LF  GK   + R+  
Sbjct: 178 VVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILS 237

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   + P   TF+ M++   K      A + +  + +    P +VTYN LI GLC  G
Sbjct: 238 DMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHG 297

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A+ +L  +   G  PNA+TY T++    ++++    ++IL  M   G   D F Y 
Sbjct: 298 LLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYN 357

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+   + + G+   A   + +MV+ GV  DI ++N L++  C+ GK+E A + L++++K 
Sbjct: 358 TLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKS 417

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA 341
                  T+ I+I G+CKA  ++ A
Sbjct: 418 ETVVGIITYNIIIKGMCKANKVEDA 442



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 204/416 (49%), Gaps = 4/416 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V ++ L+ A  +   ++A  ++   +   GIS D+ ++++LI    R S LS +L 
Sbjct: 70  LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +M+++G  P + ++ SL++    + +  EA  +   ++     P    +N +++ LC
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +NR  D AL +   ++K G  P+++TYN LI  L  +G+   +  IL ++   G  P+ I
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T++ ++    +  +     +    M ++    +   Y ++I      G L EA   +  M
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V+ G   + V+YNTL+N YCK  +++ A  +L  M   G + D +T+  L  G C+AG  
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 394
             A   L  M   G   ++  +N ++D L + GKI+ A+   E ++  ++     TY+ +
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  +CKA ++  A  L  S    GV         ++ GLR      EA ++  K++
Sbjct: 430 IKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 31/382 (8%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           + F+   T+   M E+   P +V ++ L+    +       + L   +  +GI  D++S+
Sbjct: 52  IKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSF 111

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           ++L+ C  +  +   A      M+     P   TF  ++NG C       A+ +   +  
Sbjct: 112 STLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVG 171

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G+ P +V YN +I  LC+  ++ TA  +L  +   G  P+ ITY +++   F + K+ +
Sbjct: 172 LGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGV 231

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              ILS M R G   D   +  +I  F K G+L EA    ++M+   V  +IV+YN+LIN
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             C  G L+ A  +L+ M  +GF  +  T+  L++G CK+  +  A   L          
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL---------- 341

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
                 C++   G DG               D+FTY+++    C+A +  +A K+L   +
Sbjct: 342 ------CVMSHDGVDG---------------DTFTYNTLYQGYCQAGQFNAAEKVLARMV 380

Query: 416 KSGVRILKSAQKAVVDGLRHSG 437
             GV         ++DGL   G
Sbjct: 381 SCGVLPDIYTFNMLLDGLCEHG 402



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 124/230 (53%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            F K  +L +A+    + I+  V P++VTYN LI+  C     D    +LN M   G  P
Sbjct: 257 VFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFP 316

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VTYN+L+ G  ++  +  ++ +L  M   G+  D ++YN+L     Q G+ + A +V 
Sbjct: 317 NAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVL 376

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   + P   TFN++L+GLC++   + AL     LQK   V  ++TYNI+IKG+CKA
Sbjct: 377 ARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKA 436

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ++  A ++   L   G +P+ ITYTT+M    R R +    E+   MK+
Sbjct: 437 NKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 152/324 (46%), Gaps = 35/324 (10%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + C+  +++ A  ++    ++G+ PDV+TYN LI        +     IL+ M
Sbjct: 180 IYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDM 239

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              GI PDV+T++++I    +   L  +    DEM++  + P++ +YNSL++ L   G  
Sbjct: 240 MRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLL 299

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA +V   M+     P   T+N ++NG CK++  D+A+++   +   G   +  TYN L
Sbjct: 300 DEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTL 359

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            +G C+AG+   A  +L  +   G  P+  T+  ++                        
Sbjct: 360 YQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLD----------------------- 396

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                G C       + G++++A   +E +      + I++YN +I   CK  K+E A+ 
Sbjct: 397 -----GLC-------EHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWY 444

Query: 309 LLDEMEKQGFECDKYTHTILIDGL 332
           L   +  +G   D  T+T ++ GL
Sbjct: 445 LFCSLALKGVSPDVITYTTMMIGL 468



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 173/397 (43%), Gaps = 47/397 (11%)

Query: 53  CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           C F +F  G     R+R    S   + +N              +L L  +M E    P +
Sbjct: 30  CNFGAFSGGSDYRERLRSGLHS---IKFND-------------ALTLFCDMAESRPLPSI 73

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
             ++ L+  + +L K +    +F+ +    ++    +F+ +++  C+      AL     
Sbjct: 74  VDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGK 133

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           + K GF P +VT+  L+ G C   R++ A  ++ ++   G+ PN + Y TI+     NR+
Sbjct: 134 MMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQ 193

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L++L+ M++ G   D   Y ++I      G+   +   +  M+  G+  D+++++ 
Sbjct: 194 VDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSA 253

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I+++ KEG+L  A    DEM ++  + +  T+  LI+GLC  G +  A+  L +M   G
Sbjct: 254 MIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKG 313

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           F  N                               + TY+++V+  CK+KR+  A K+L 
Sbjct: 314 FFPN-------------------------------AVTYNTLVNGYCKSKRVDDAMKILC 342

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                GV         +  G   +G    A+K+ +++
Sbjct: 343 VMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 1/171 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +CK+ R++ A  I+      GV  D  TYN L   YCQ   F+A   +L RM  
Sbjct: 322 NTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVS 381

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+ T+N L+ G   +  +  +L  L+++ +      + +YN ++  + +  K ++
Sbjct: 382 CGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVED 441

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-HGFVP 180
           A  +F  +    ++P   T+  M+ GL + R    A  ++R ++K  G +P
Sbjct: 442 AWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492


>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g79080, chloroplastic; Flags: Precursor
 gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
 gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 576

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 220/445 (49%), Gaps = 7/445 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANRL+KA  +I   +  G++PD   Y  L++  C+  +      ++ +M + G   +
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+L+ G      L+ SL  ++ +++ G+ P+ ++Y+ L+   ++    DEA ++  
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 235

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L G CK   TD+A+ +FR L   GF   +V+YNIL++ LC  G
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFG 254
           R   A  +L E+     AP+ +TY  ++     + + +  L++L  M +  + F      
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  VIA   K G++      +++M+    + +  +YN + +L     K++ A+ ++  + 
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +   C    +  +I  LC+ GN   A   L  M + GFD +   Y+ ++  L  +G   
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFT 475

Query: 375 HAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
            A+ V   ME  ++       +++M+  LCK +R   A ++    ++      ++    +
Sbjct: 476 GAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAIL 535

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
           V+G+ H      AK++  ++R+ K+
Sbjct: 536 VEGIAHEDELELAKEVLDELRLRKV 560



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 2/293 (0%)

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           LS S   L+ ++  G  P+V     L++ L +  +  +A RV + M+   + P  + +  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++N LCK      A+++   ++ HG+    VTYN L++GLC  G L  +   ++ L   G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            APNA TY+ +++  ++ R     +++L  +  KG   +   Y  ++  F K GR  +A 
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               ++   G + ++VSYN L+   C +G+ E A  LL EM+         T+ ILI+ L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 333 CKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              G  + A   L+ M+K    F     +YN ++ RL K+GK+D  +   + M
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 183/413 (44%), Gaps = 42/413 (10%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++   +   ++ G+ P+  TY+ L++A  +    D    +L
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++ L  E+   G   +V SYN L+ CL   
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--HGFVPELV 183
           G+ +EAN +  +M  GD  P   T+NI++N L  +  T+ AL++ + + K  H F     
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YN +I  LCK G++      L E+      PN  TY  I   C  N K +    I+ ++
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K         CT               D+               Y ++I   C++G  
Sbjct: 415 SNKQKC------CT--------------HDF---------------YKSVITSLCRKGNT 439

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNC 362
            AA+ LL EM + GF+ D +T++ LI GLC  G   GA   L  M +       ++ +N 
Sbjct: 440 FAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNA 499

Query: 363 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           ++  L K  + D A+ VFE M     + +  TY+ +V  +     L  A ++L
Sbjct: 500 MILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 6/212 (2%)

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           L+ L   GH PN    T ++    +  + K  + ++  M   G   D   Y  ++    K
Sbjct: 94  LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G +  A   +E+M   G   + V+YN L+   C  G L  +   ++ + ++G   + +T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213

Query: 325 HTILIDGLCKA-GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           ++ L++   K  G  +  +L  E + K G + NL +YN ++    K+G+ D A+ +F  +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVK-GGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K    +  +Y+ ++  LC   R   A+ LL
Sbjct: 273 PAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 4/148 (2%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L ++  ++E +VT G + ++     L+   CK  +L+ A  +++ M   G   D   +T 
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L++ LCK GN+  A   +E M   G+ SN   YN +V  L   G ++ ++   E +  K 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLL 411
              ++FTYS ++    K +    A KLL
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLL 234



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           E  L  ++  L+ +   G + +    T L+  LCKA  +K A   +E M   G   +  A
Sbjct: 84  EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  +V++L K G + +A+ + E ME      ++ TY+++V  LC    L  + + +   +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203

Query: 416 KSGV 419
           + G+
Sbjct: 204 QKGL 207


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 174/340 (51%), Gaps = 36/340 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVV YN +IDA C++      Y + + M   GIS DVVTYN+LI G      L  ++ L
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGL 256

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGK-----------------PD------------- 129
           L+EM+   I P+V++YN L+  L + GK                 PD             
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 130 -----EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                +A  VF  M    +TP   T+ I++NG CKN+  D AL +F+ + +   VP +VT
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ LI GLCK+GR+     ++ E+ D G   + ITY++++    +N      + + + MK
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +    + F +  ++    K GRLK+A +  + ++T G  L++ +YN +IN +CK+G LE
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 305 AAYLLLDEMEKQGFECDKYT-HTILIDGLCKAGNIKGARL 343
            A  +L +ME  G   + +T  TI+I    K  N K  +L
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 206/419 (49%), Gaps = 6/419 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD++T N+LI+ +C       G+++L ++ + G  PD VT N+LI G      +  +
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
           L   D++L  G   +  SY +L++ + ++G    A + F   I G LT P    +N +++
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIK-FLRKIDGRLTKPDVVMYNTIID 207

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            +CK +    A  +F  +   G   ++VTYN LI G C  G+L+ A  +L E+      P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TY  ++    +  K K    +L+ M +     D   Y T++  +  +  +K+A    
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M   GV  D+ +Y  LIN +CK   ++ A  L  EM ++       T++ LIDGLCK+
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTY 391
           G I      ++ M   G  +++  Y+ ++D L K+G +D AI +F  M   E++ + FT+
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  LCK  RL  A ++    L  G  +       +++G    G   EA  + SK+ 
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 204/449 (45%), Gaps = 39/449 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYN----------------------- 46
           LNI +  FC   ++    +++   ++ G  PD VT N                       
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 47  ------------MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
                        LI+  C+     A    L ++      PDVV YN++I    +  L+S
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L  EM   GI  DV +YN+L++    +GK  EA  +  +M+   + P   T+NI++
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           + LCK      A  +   + K    P+++TY+ L+ G      ++ A+ +   +   G  
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TYT ++    +N+     L +   M +K        Y ++I    K GR+    D 
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M   G   D+++Y++LI+  CK G L+ A  L ++M+ Q    + +T TIL+DGLCK
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
            G +K A+   + +   G+  N+  YN +++   K G ++ A+ +   ME    + ++FT
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + +++  L K      A KLL   +  G+
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 186/400 (46%), Gaps = 4/400 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   +  NRM     +P ++ +N ++    +    S ++ L   +   GI PD+ + N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C   +G+      V   ++     P T T N ++ GLC       AL     L   GF
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
               V+Y  LI G+CK G  R A   L+++      P+ + Y TI+    + +       
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + S M  KG + D   Y T+I  F  +G+LKEA   + +MV   +  ++ +YN L++  C
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEGK++ A  +L  M K   + D  T++ L+DG      +K A+     M+ +G   ++ 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  +++   K+  +D A+N+F+ M  K+      TYSS++  LCK+ R+     L+   
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              G         +++DGL  +G    A  + +K++  +I
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 208/414 (50%), Gaps = 4/414 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +   C   R+ +A   +   +  G  P V T+ M+++  C+     A   
Sbjct: 171 KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIV 230

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            + +M E    P+VV+Y+ +I    +N L++ ++DL   M  +GI P V +YNSL++ + 
Sbjct: 231 WMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMC 290

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+  +A+ +F++M+  ++ P   TF+I+++ LCK      AL +F  + +    P++V
Sbjct: 291 NSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI G+CK+   + +  +L E+      P+ +T++  +    +         I++ M
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   +   Y +++  +    ++ EA    + MV  G   D++SYN LI  YCK  ++
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERI 470

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L DEM  +G   +  THT LI GLC+AG    A+   + M   G   +L  Y+ +
Sbjct: 471 DEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTL 530

Query: 364 VDRLGKDGKIDHAINVFESM---EVKDSFTYSS-MVHNLCKAKRLPSASKLLLS 413
           +    K G +D A+ +FE++   ++K +      ++  +CKA +L  A +L  S
Sbjct: 531 LSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSS 584



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 199/381 (52%), Gaps = 5/381 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            GV   V T  +LI+  C       G+++L ++ + G  P ++T+N+LI G      +  
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVE 192

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +++ LD ++  G  P V+++  +++ L ++GK   A    + M+  D  P   +++I+++
Sbjct: 193 AMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIID 252

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCKNR  + A+ +F  ++  G  P +VTYN LI G+C +G+ + A  + KE+ +    P
Sbjct: 253 SLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKP 312

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T++ ++    +       L +   M +     D   Y ++I    K    KE++  +
Sbjct: 313 DVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLL 372

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M++  ++ D+V+++  ++++CK+G +  A  +++ M ++G   +  T+  L+DG C  
Sbjct: 373 NEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             +  AR   + M   G   ++ +YN ++    K  +ID A  +F+ M  K    +S T+
Sbjct: 433 SQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITH 492

Query: 392 SSMVHNLCKAKRLPSASKLLL 412
           ++++  LC+A R P A+K L 
Sbjct: 493 TTLISGLCQAGR-PYAAKELF 512



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 180/371 (48%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +   A   +   + L   P+VV+Y+++ID+ C+    +    +   MR  GISP 
Sbjct: 219 LCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPT 278

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI G   +     +  L  EMLE  + PDV +++ L+  L + G   EA  VF 
Sbjct: 279 VVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFG 338

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   + P   T++ +++G+CK+     +  +   +      P++VT++I +   CK G
Sbjct: 339 KMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKG 398

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A+ I+  + + G  PN +TY ++M     + +     ++   M  KG   D   Y 
Sbjct: 399 MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYN 458

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  + K  R+ EA    ++M   G+  + +++ TLI+  C+ G+  AA  L  +M   
Sbjct: 459 ILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSH 518

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T++ L+ G CK G++  A    E + K     N      ++  + K GK++ A
Sbjct: 519 GCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578

Query: 377 INVFESMEVKD 387
             +F S+ +++
Sbjct: 579 KELFSSLSIEE 589



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 2/305 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C + + ++A  +  + +   + PDVVT+++L+DA C+        ++  +M +  + PD+
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY+SLI G  ++SL   S  LL+EML   I PDV +++  +    + G   EA  +   
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI   L P   T+N +++G C +   D A ++F  +   G  P++++YNILIKG CK+ R
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +  A+ +  E+   G  PN+IT+TT++   C   R Y    E+   M   G   D   Y 
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYA-AKELFKKMGSHGCPPDLITYS 528

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+++ F K G L EA    E +    ++ + V    L+   CK GKLE A  L   +  +
Sbjct: 529 TLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIE 588

Query: 317 GFECD 321
             + D
Sbjct: 589 ELQPD 593



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 193/420 (45%), Gaps = 4/420 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + +   P +  +N L+ A  +   +D+  +I  +M   G+S  V T   LI       L+
Sbjct: 96  VHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLV 155

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                +L ++ ++G  P + ++N+L++ L   G+  EA      ++     P   T  ++
Sbjct: 156 GLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMI 215

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NGLCK   T  A+   + + +    PE+V+Y+I+I  LCK   +  A  +   +   G 
Sbjct: 216 VNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGI 275

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P  +TY +++     + ++K    +   M       D   +  ++ A  K G + EA  
Sbjct: 276 SPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALS 335

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M+   ++ DIV+Y++LI+  CK    + +  LL+EM  +    D  T +I +D  C
Sbjct: 336 VFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           K G +  A+  +  M + G   N+  YN ++D      ++D A  VF+ M  K    D  
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +Y+ ++   CK++R+  A +L       G+         ++ GL  +G    AK++  K+
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 110/208 (52%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            +I V  FCK   + +A++II   I  G+ P+VVTYN L+D YC     D    + + M 
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G +PDV++YN LI G  ++  +  +  L DEM   G+ P+  ++ +L+  L Q G+P 
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPY 506

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F+ M      P   T++ +L+G CK+ + D AL +F  L+K    P  V   IL+
Sbjct: 507 AAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILL 566

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNA 217
            G+CKAG+L  A+ +   L      P+ 
Sbjct: 567 GGMCKAGKLEDAKELFSSLSIEELQPDV 594


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 214/433 (49%), Gaps = 4/433 (0%)

Query: 22   RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
            + + A ++  + ++   +P +V +  ++    +   FD    + ++M   GIS D+ ++ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 82   SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
             LI    R S LS +L LL +M+++G  P + +  SL++   Q  +  EA  +   M   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 142  DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
               P    +N ++NGLCKNR  +NAL +F  ++K G   + VTYN LI GL  +GR   A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 202  RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
              +L+++      PN I +T ++    +         +   M R+    + F Y ++I  
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 262  FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            F   G L +A    + MV+ G   D+V+YNTLI  +CK  ++E    L  EM  QG   D
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 322  KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             +T+  LI G C+AG +  A+     M   G   ++  YN ++D L  +GKI+ A+ + E
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 382  SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             ++      D  TY+ ++  LC+  +L  A  L  S  + GV+    A   ++ GL   G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 438  CRREAKKIQSKIR 450
             +REA K+  +++
Sbjct: 1004 LQREADKLCRRMK 1016



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 198/384 (51%), Gaps = 18/384 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC+ +RL  A +++   ++LG  P +VT+  L+  +C        ++++  M 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++G  P+VV YN+LI G  +N  L+ +L+LL+EM + G+  DV +YN+L+  L   G+  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DM+   + P   TF  +++   K    D A  +++ + +    P  VTYN +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  GRL  A+     +   G  PN +TY T++    + R    G+++   M  +G+ 
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T+I  + ++G+L+ A D    MV+  V  DI+++  L++  C  G++E+A + 
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 310 LDEMEKQGFECDKY----THTILIDGLCKAGNIKGA-----RLHLEYMNKIGFDSNLEAY 360
            D+M     E +KY     + I+I GLCKA  ++ A     RL +E     G   +   Y
Sbjct: 409 FDDMR----ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE-----GVKPDARTY 459

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             ++  L K+G    A  +   M+
Sbjct: 460 TIMILGLCKNGPRREADELIRRMK 483



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 4/438 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F  + R E A A+  + +    LP +V +  L+ A      ++       +M   GIS D
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++  LI    R S LS +L +L +M+++G  P + ++ SL+H    + +  +A  +  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P    +N +++GLCKN   + AL +   ++K G   ++VTYN L+ GLC +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L+++      P+ +T+T ++    +        E+   M +     +   Y 
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I      GRL +A    + M + G   ++V+YNTLI+ +CK   ++    L   M  +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF  D +T+  LI G C+ G ++ A     +M       ++  +  ++  L  +G+I+ A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405

Query: 377 INVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  F+ M   + +     Y+ M+H LCKA ++  A +L       GV+        ++ G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465

Query: 433 LRHSGCRREAKKIQSKIR 450
           L  +G RREA ++  +++
Sbjct: 466 LCKNGPRREADELIRRMK 483



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 200/388 (51%), Gaps = 1/388 (0%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
              I +  FC+ +RL  A A++   ++LG  P +VT   L++ +CQ   F    ++++ M 
Sbjct: 642  FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              G  P+VV YN++I G  +N  L+ +L++   M + GI  D  +YN+L+  L   G+  
Sbjct: 702  GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            +A R+ +DM+   + P    F  +++   K      A  +++ + +   VP + TYN LI
Sbjct: 762  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821

Query: 190  KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             G C  G L  A+++   +   G  P+ +TY T++    ++++ + G+++   M  +G  
Sbjct: 822  NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881

Query: 250  FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
             D F Y T+I  + + G+L  A     +MV  GV  DIV+YN L++  C  GK+E A ++
Sbjct: 882  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 941

Query: 310  LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +++++K   + D  T+ I+I GLC+   +K A      + + G   +  AY  ++  L +
Sbjct: 942  VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001

Query: 370  DGKIDHAINVFESMEVKDSFTYSSMVHN 397
             G    A  +   M+ +D F  S  +++
Sbjct: 1002 KGLQREADKLCRRMK-EDGFMPSERIYD 1028



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 173/343 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  NR+  A +++I  ++ G  P+VV YN LID  C+    +    +LN M + G+  D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G   +   S +  +L +M++  I PDV ++ +L+    + G  DEA  +++
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   + P   T+N ++NGLC +    +A + F  +   G  P +VTYN LI G CK  
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +     + + +   G   +  TY T++    +  K ++ L+I   M  +  T D   +C
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G ++ A    + M      + IV+YN +I+  CK  K+E A+ L   +  +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           G + D  T+TI+I GLCK G  + A   +  M + G    + A
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 4/226 (1%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            FC    L  A+ +    +  G  PDVVTYN LI  +C+    + G  +   M   G+  D
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              TYN+LI G  +   L+ +  + + M++ G+ PD+ +YN L+ CL   GK ++A  + +
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            D+   ++     T+NI++ GLC+      A  +FR L + G  P+ + Y  +I GLC+ G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 197  RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
              R A  + + + + G  P+   Y   +    R+    L  E++ A
Sbjct: 1004 LQREADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKA 1045



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 35/272 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C + R   A  ++ D ++  + PDVVT+  LID + +  + D    +   M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274

Query: 71  AGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLDLLDE 102
           + + P+ VTYNS+I G                           T N+L+S  C   ++DE
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334

Query: 103 MLEM-------GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            +++       G   D+++YN+L+H   Q+GK   A  +F  M+   +TP   T  I+L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC N   ++AL  F  +++      +V YNI+I GLCKA ++  A  +   L   G  P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +A TYT ++    +N   +   E++  MK +G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/491 (21%), Positives = 203/491 (41%), Gaps = 59/491 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   RL  A+         G  P+VVTYN LI  +C+F   D G  +  RM   G + D
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS---------------------- 114
           + TYN+LI G  +   L  +LD+   M+   + PD+ +                      
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 115 -------------YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                        YN ++H L +  K ++A  +F  +    + P   T+ IM+ GLCKN 
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN----- 216
               A  + R +++ G + ++   +  ++    + +       L+E+ +   +       
Sbjct: 471 PRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK--EISLSLREIWERSKSNPFWMQR 528

Query: 217 --AITYTTIMKCCFRNRKYKL---GLEILSAMKRKGYTFDGFG----YCTVIAAFVKIGR 267
              I +++ +K  F  R Y L   G    +++ R   +F G      Y   +   +   +
Sbjct: 529 LIPIAFSSSVKG-FVRRHYLLLERGNNPETSLSR---SFSGASHHHHYRERLRNELHCIK 584

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             +A     +M+       IV +  ++ +  K  K +    L  +ME  G   D Y+ TI
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           LI   C+   +  A   L  M K+GF  ++     +++   +  +   A+++ +SM+   
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 704

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            V +   Y+++++ LCK + L +A ++     K G+R        ++ GL +SG   +A 
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 764

Query: 444 KIQSKIRMAKI 454
           ++   +   KI
Sbjct: 765 RLLRDMVKRKI 775



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   + R   A  +  E+  S   P+ + +T ++      R+Y+  +     M+  G + 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + +  +I  F +  RL  A   + +M+  G +  IV++ +L++ +C   ++  A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M K G+E +   +  LIDGLCK G +  A   L  M K G  +++  YN ++  L   
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+   A  +   M  +    D  T+++++    K   L  A +L    ++S V       
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 427 KAVVDGLRHSGCRREAKK 444
            ++++GL   G   +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 213/461 (46%), Gaps = 37/461 (8%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +   CK  +LE+   I+ + +  G++P V TYN LID YC+    +A   IL+ M   
Sbjct: 114 VMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSN 173

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
             +P+  TYN LI G  R   +  ++ LL +MLE  + P V +YNSL+H   ++G  D A
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSA 233

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            R+   M    + P   T+++ ++ LCK    + A  +F  L++ G     V Y  LI G
Sbjct: 234 YRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDG 293

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CKAG++  A  +L  +      PN+ TY  ++    + RK +  L ++ +M +KG    
Sbjct: 294 YCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCT 353

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I A +K G    A   ++QMV+ G Q D+  Y   I+ +C  G ++ A  ++ 
Sbjct: 354 VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M ++G   D  T+T++ID     G +  A   L+ M   G D +   Y+C++  L K+ 
Sbjct: 414 MMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE 473

Query: 372 -----------------------------KIDHAINVFESME----VKDSFTYSSMVHNL 398
                                        K + A+ +FE M       +  TY+ ++  L
Sbjct: 474 LTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGL 533

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           CK  RL  A KL     + GV    S  +A+ + L +  C 
Sbjct: 534 CKVGRLGVAQKLFDHMNERGV----SPSEAIYNSLLNCCCE 570



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 191/401 (47%), Gaps = 4/401 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R   + V    ++ R  +A  +  +    G  P++ TY ++I+A C+    + G  IL
Sbjct: 73  TVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRIL 132

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M E G+ P V TYN+LI G  +  ++  + ++LD M      P+  +YN L+    + 
Sbjct: 133 DEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRK 192

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
                A  +   M+   LTP   T+N +++G CK  Y D+A R+   + ++G VP+  TY
Sbjct: 193 KNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTY 252

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++ I  LCK GR+  A  +   L + G   N + YT ++    +  K      +L  M  
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +    +   Y  +I    K  +++EA   ME M+  G++  + +Y  LI    KEG  + 
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+ +LD+M   G++ D Y +T  I   C  GNIK A   +  M + G   +   Y  ++D
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432

Query: 366 RLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAK 402
             G  G ++ A +V    F++       TYS ++ +L K +
Sbjct: 433 AYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE 473



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 12/385 (3%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           V+Y  LI   C+    D G  I  +MRE    P V TY  ++     +     +++L  E
Sbjct: 40  VSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSE 99

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M E G  P++ +Y  +++ + +  K +E  R+  +M+   L P   T+N +++G CK   
Sbjct: 100 MRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGM 159

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A  +   +  +   P   TYN LI G C+   +  A  +L ++ +S   P+ +TY +
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219

Query: 223 IM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           ++    K  + +  Y+L    L+ M   G   D + Y   I    K GR++EA      +
Sbjct: 220 LIHGQCKIGYLDSAYRL----LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G++ + V Y  LI+ YCK GK++ A  LLD M  +    +  T+  LIDGLCK   +
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
           + A L +E M + G    +  Y  ++  + K+G  D+A  + + M       D + Y++ 
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGV 419
           +H  C    +  A  ++    + GV
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGV 420



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 184/383 (48%), Gaps = 4/383 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  R+++   I          P V TY +++ A  +         + + MRE G  P+
Sbjct: 49  LCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPN 108

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY  +I    + + L     +LDEM+E G+ P V +YN+L+    + G  + A  +  
Sbjct: 109 IHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILD 168

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   T+N ++ G C+ +    A+ +   + +    P +VTYN LI G CK G
Sbjct: 169 LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIG 228

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L +A  +L  + ++G  P+  TY+  +    +  + +    + +++K KG   +   Y 
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  + K G++ +A   +++M+T+    +  +YN LI+  CKE K++ A LL++ M ++
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +C   T+TILI  + K G+   A   L+ M   G+  ++  Y   +      G I  A
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408

Query: 377 IN----VFESMEVKDSFTYSSMV 395
            +    +FE   + D+ TY+ ++
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVI 431



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 196/414 (47%), Gaps = 15/414 (3%)

Query: 48  LIDAYCQFVSF---------DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +++ YC+  +          ++ +++ N M + G   + V+Y +LI G      +   ++
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +  +M E    P V +Y  ++H LF+ G+  EA  +F +M      P   T+ +M+N +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    +   R+   + + G VP + TYN LI G CK G +  A+ IL  +  +   PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 219 TYTTIMKCCF-RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           TY  ++ C F R +     + +LS M     T     Y ++I    KIG L  A   +  
Sbjct: 181 TYNELI-CGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M  +GV  D  +Y+  I+  CK+G++E A +L + ++++G + ++  +T LIDG CKAG 
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
           +  A   L+ M       N   YN ++D L K+ K+  A+ + ESM  K       TY+ 
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           ++  + K      A ++L   + SG +       A +      G  +EA+ + S
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 29/389 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  N  +C FC+   + +A A++   +   + P VVTYN LI   C+    D+ Y +L
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLL 237

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M E G+ PD  TY+  I    +   +  +  L + + E GI  +   Y +L+    + 
Sbjct: 238 NLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKA 297

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK D+AN +   M+  D  P ++T+N +++GLCK R    AL +   + + G    + TY
Sbjct: 298 GKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTY 357

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI  + K G    A  IL ++  SG+ P+   YT  +         K   +++S M  
Sbjct: 358 TILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG---- 301
           +G   D   Y  VI A+  +G L  A D +++M   G      +Y+ LI    KE     
Sbjct: 418 RGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK 477

Query: 302 -------------------------KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
                                    K E A  L ++M + G   +  T+  LI GLCK G
Sbjct: 478 YKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVG 537

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
            +  A+   ++MN+ G   +   YN +++
Sbjct: 538 RLGVAQKLFDHMNERGVSPSEAIYNSLLN 566



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 171/400 (42%), Gaps = 29/400 (7%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           T CK  R+E+A  +       G+  + V Y  LID YC+    D   ++L+RM      P
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TYN+LI G  +   +  +L L++ M++ G+   V +Y  L+  + + G  D A+R+ 
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+     P    +   ++  C       A  M   + + G +P+ +TY ++I      
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGL 437

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR------------------------ 231
           G L  A  +LK + D+G  P+  TY+ ++K   +                          
Sbjct: 438 GLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVAD 497

Query: 232 -----KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
                K++  LE+   M   G + +   Y  +I    K+GRL  A    + M   GV   
Sbjct: 498 VWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPS 557

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
              YN+L+N  C+ G    A  L+  M + G      +  +L  GL + G+ + A++   
Sbjct: 558 EAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFS 617

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            + + G++ +  A+  ++D L K+G  D    +   ME +
Sbjct: 618 NLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEAR 657



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 144/329 (43%), Gaps = 6/329 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +     I +    K    + A  I+   +  G  PDV  Y   I A+C   +      
Sbjct: 351 KCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAED 410

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +++ M E G+ PD +TY  +I       LL+ + D+L  M + G  P   +Y+ L+  L 
Sbjct: 411 MMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLL 470

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    +E  + ++++   D  P    F   +  + K    + AL +F  + +HG  P + 
Sbjct: 471 K----EELTKKYKNVALCDSIP--NVFFADVADVWKMMKFETALELFEKMLEHGCSPNIN 524

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  LI GLCK GRL  A+ +   + + G +P+   Y +++ CC     Y   + ++ AM
Sbjct: 525 TYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G+         +     + G  ++A      ++  G   D V++  LI+   K G  
Sbjct: 585 MEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLS 644

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +    LL  ME +G +    T+ +LI+GL
Sbjct: 645 DGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 130/311 (41%), Gaps = 48/311 (15%)

Query: 153 MLNGLCK---------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           M+NG CK         N   ++A  +F  + K G     V+Y  LI GLC+ GR+     
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           I K++ +    P   TYT I+   F +                                 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFES--------------------------------- 87

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
             GR  EA +   +M   G + +I +Y  +IN  CKE KLE    +LDEM ++G      
Sbjct: 88  --GRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP 145

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NV 379
           T+  LIDG CK G ++ A+  L+ M+    + N   YN ++    +   +  A+     +
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
            ES       TY+S++H  CK   L SA +LL    ++GV   +      +D L   G  
Sbjct: 206 LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265

Query: 440 REAKKIQSKIR 450
            EA  + + ++
Sbjct: 266 EEANVLFNSLK 276


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 196/391 (50%), Gaps = 7/391 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           RL   P+ ++Y  L+ A C          +L  M++ G+ PDVVTY +LI G    + + 
Sbjct: 87  RLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVD 146

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +++LL+EM E GI P+V  Y+ L+H   + G+ +   +VF++M    + P    +  ++
Sbjct: 147 TAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALI 206

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           + LC++     A R+   + + G  P +VTYN+LI  +CK G +R A  + K + + G  
Sbjct: 207 DSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQ 266

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT---FDGFGYCTVIAAFVKIGRLKEA 271
           P+ +TY T++       +    + +L  M  +G T    D   + +VI    KIG +++A
Sbjct: 267 PDVVTYNTLITGLSSVLEMDEAMALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQA 325

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                 M  +G + ++V++N LI    +  K++ A  L+DEM   G + D +T++ILI+G
Sbjct: 326 LQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILING 385

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DS 388
            CK   ++ A  +L  M   G +     Y  ++  +   G +  A ++F  M+     D+
Sbjct: 386 FCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDA 445

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             YS+M+H   K+     A + L   +  G+
Sbjct: 446 AAYSTMIHGAFKSGEKKIAEEFLKDMIDEGL 476



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 11/411 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   R  +A  ++      GV PDVVTY  LI   C     D    +LN M E+GI P
Sbjct: 103 ALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEP 162

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+ L+ G  +         + +EM   GI PDV  Y +L+  L + GK  +A RV 
Sbjct: 163 NVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVM 222

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M    L P   T+N+++N +CK      AL + + + + G  P++VTYN LI GL   
Sbjct: 223 DMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSV 282

Query: 196 GRLRTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             +  A  +L+E+  G++   P+ +T+ +++    +    +  L++ + M   G   +  
Sbjct: 283 LEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLV 342

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +  +I   +++ ++K+A + M++M + G+Q D  +Y+ LIN +CK  ++E A   L EM
Sbjct: 343 AFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEM 402

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRLGKDG 371
             QG E +   +  L+  +C  G +  AR   +  N++  +  L+  AY+ ++    K G
Sbjct: 403 RHQGMEPEPVHYIPLLKAMCDQGMMGQAR---DLFNEMDRNCKLDAAAYSTMIHGAFKSG 459

Query: 372 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +   A    + M     + D+ TYS  ++   K+  L +A ++L     SG
Sbjct: 460 EKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 192/373 (51%), Gaps = 3/373 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  R E    +  +    G+ PDVV Y  LID+ C+         +++ M E G+ P+
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    +   +  +LDL   M E G+ PDV +YN+L+  L  + + DEA  + +
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE 293

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+ G+  + P   TFN +++GLCK  +   AL++   + ++G    LV +N+LI GL +
Sbjct: 294 EMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             +++ A  ++ E+  SG  P++ TY+ ++    + R+ +     LS M+ +G   +   
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVH 413

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++ A    G + +A D   +M  +  +LD  +Y+T+I+   K G+ + A   L +M 
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI 472

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   D  T++I I+   K+G++  A   L+ M   GF  ++  ++ ++   G  G  +
Sbjct: 473 DEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTE 532

Query: 375 HAINVFESMEVKD 387
             + +   M  KD
Sbjct: 533 KILELTREMTAKD 545



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 165/327 (50%), Gaps = 5/327 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C+  +++KA  ++      G+ P+VVTYN+LI++ C+  S      +   M E G+ P
Sbjct: 208 SLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQP 267

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEML--EMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           DVVTYN+LI G +    +  ++ LL+EM+  E  + PD+ ++NS++H L ++G   +A +
Sbjct: 268 DVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQ 327

Query: 134 VFQDMICGDLTPCT-ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           V + M+  +   C    FN+++ GL +      A+ +   +   G  P+  TY+ILI G 
Sbjct: 328 V-RAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGF 386

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK  ++  A   L E+   G  P  + Y  ++K            ++ + M R     D 
Sbjct: 387 CKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDA 445

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I    K G  K A ++++ M+ +G+  D V+Y+  IN++ K G L AA  +L +
Sbjct: 446 AAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQ 505

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIK 339
           M   GF  D      LI G    G+ +
Sbjct: 506 MTASGFVPDVAVFDSLIQGYGAKGDTE 532



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 11/346 (3%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEM---LEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           D V+YN+++A   R   L  +L LL  M     +   P+  SY +LM  L    +  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            + + M    + P   T+  ++ GLC     D A+ +   + + G  P +V Y+ L+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK GR  +   + +E+   G  P+ + YT ++    R+ K K    ++  M  +G   + 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I +  K G ++EA D  + M   GVQ D+V+YNTLI       +++ A  LL+E
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 313 MEKQG---FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           M  QG      D  T   +I GLCK G ++ A      M + G   NL A+N ++  L +
Sbjct: 295 M-MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
             K+  A+ + + M       DSFTYS +++  CK +++  A   L
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYL 399



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 1/187 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +    + ++++KA  ++ +    G+ PD  TY++LI+ +C+    +   + L+ MR
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+ V Y  L+       ++  + DL +EM +     D  +Y++++H  F+ G+  
Sbjct: 404 HQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKK 462

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A    +DMI   L P   T++I +N   K+     A R+ + +   GFVP++  ++ LI
Sbjct: 463 IAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLI 522

Query: 190 KGLCKAG 196
           +G    G
Sbjct: 523 QGYGAKG 529



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 8/166 (4%)

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILIDGLCKAGNIKGAR 342
           D VSYNT++   C++G L+AA  LL  M  +       +  ++T L+  LC       A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNL 398
             L  M   G   ++  Y  ++  L     +D A+ +     ES    +   YS ++H  
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL-RHSGCRREAK 443
           CK  R  S  K+       G+        A++D L RH   ++ A+
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAAR 220


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 217/440 (49%), Gaps = 9/440 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+E+A  ++ +  R G+  DVV Y+ LI  +C     D G  + + M E GISP+
Sbjct: 55  LCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPN 114

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y+ LI G  +  L   +  +L  M E GI PDV++Y  ++  L + G+  +A  +F 
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P T T+N+++NGLCK     +A ++F  + + G   E+V+YN LI GLC  G
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234

Query: 197 RLRTARWILKELGDSGH--APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           +L  A  +   L + G+   P+ IT+ T+++   +  +    +EI   M  +G   + F 
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
              +I  ++K G + +A +  +++   G+     +Y+ +I+ +CK   L  A  L   M+
Sbjct: 295 CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G     + +  L+  LCK  +++ AR   + M +   + +  ++N ++D   K G I 
Sbjct: 355 ISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIH 414

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  +   M+      D++TYSS ++ L K  ++  A     S + SG+        +++
Sbjct: 415 SAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474

Query: 431 DGLRHSGCRREAKKIQSKIR 450
            G    G   E +++ + +R
Sbjct: 475 KGF---GLNDEIEEVINLLR 491



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 205/439 (46%), Gaps = 6/439 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  RLEKA  ++++       P+  TY +L+D  C+    +    +L  M+ 
Sbjct: 14  NTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKR 73

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  DVV Y++LI+G      L     L DEMLE GI P+V  Y+ L++   + G   E
Sbjct: 74  KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWRE 133

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V   M    + P   T+  M+ GLCK+     AL +F  + + G  P  VTYN+LI 
Sbjct: 134 ATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLIN 193

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--Y 248
           GLCK G +  A  I + + + G     ++Y T++     N K    +++ S++   G   
Sbjct: 194 GLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYV 253

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   + TVI    K GRL +A +  + M+  G   ++ + + LI  Y K G ++ A  
Sbjct: 254 EPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAME 313

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   + K G      T++++IDG CK   +  A+     M   G    L  YN ++  L 
Sbjct: 314 LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLC 373

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K+  ++ A  +F+ M+      D+ +++ M+    KA  + SA +LL    + G+     
Sbjct: 374 KESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAY 433

Query: 425 AQKAVVDGLRHSGCRREAK 443
              + ++ L   G   EAK
Sbjct: 434 TYSSFINRLSKLGQMEEAK 452



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 201/422 (47%), Gaps = 6/422 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R+ +LPD+V+YN +I+  C+    +    +L  M  +   P+  TY  L+ G  +   + 
Sbjct: 3   RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVE 62

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++ LL EM   G+  DV  Y++L+      G  D    +F +M+   ++P    ++ ++
Sbjct: 63  EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK      A  +   + + G  P++ TY  +I GLCK GR R A  +   + + G  
Sbjct: 123 NGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE 182

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +TY  ++    +        +I   M  KG   +   Y T+I      G+L EA   
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242

Query: 275 MEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              ++ DG  V+ D++++NT+I   CKEG+L+ A  + D M ++G   + +T  ILI   
Sbjct: 243 FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEY 302

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
            K+G I  A    + ++K+G   +   Y+ ++D   K   ++ A  +F  M++       
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTL 362

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           F Y++++ +LCK   L  A +L     +S       +   ++DG   +G    AK++ + 
Sbjct: 363 FDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLND 422

Query: 449 IR 450
           ++
Sbjct: 423 MQ 424



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 2/369 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK     +A A++      G+ PDV TY  +I   C+         + + M E G  P 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN LI G  +   +  +  + + MLE G   +V SYN+L+  L   GK DEA ++F 
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            ++     + P   TFN ++ GLCK    D A+ ++  + + G    L T +ILI    K
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           +G +  A  + K +   G  P++ TY+ ++    +         + S MK  G +   F 
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++A+  K   L++A    ++M     + D +S+N +I+   K G + +A  LL++M+
Sbjct: 365 YNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ 424

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G   D YT++  I+ L K G ++ A+   + M   G   +   Y+ ++   G + +I+
Sbjct: 425 QMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIE 484

Query: 375 HAINVFESM 383
             IN+   M
Sbjct: 485 EVINLLRQM 493



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 6/350 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+   I PD+V+YN++I G  +   L  ++DLL EM      P+ ++Y  LM  L + G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA R+  +M    L      ++ +++G C     D    +F  + + G  P +V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CK G  R A  +L  + + G  P+  TYT ++    ++ + +  L++   M  KG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  +I    K G + +A    E M+  G +L++VSYNTLI   C  GKL+ A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 308 LLLDEMEKQG--FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
            L   + + G   E D  T   +I GLCK G +  A    + M + G   NL   + ++ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              K G ID A+ +++ +     V  S TYS M+   CK   L  A  L 
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 134/250 (53%), Gaps = 4/250 (1%)

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +++   +P++V+YN +I GLCK  RL  A  +L E+  S   PN+ TY  +M    +  +
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            +  + +L  MKRKG   D   Y T+I+ F   G L       ++M+  G+  ++V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           LIN +CK+G    A  +L  M ++G + D YT+T +I GLCK G  + A    + M + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
            + +   YN +++ L K+G I  A  +FE+M  K    +  +Y++++  LC   +L  A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 409 KLLLSCLKSG 418
           KL  S L+ G
Sbjct: 241 KLFSSLLEDG 250



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 161/326 (49%), Gaps = 3/326 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N+ +   CK   +  A  I    +  G   +VV+YN LI   C     D    + 
Sbjct: 184 STVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLF 243

Query: 66  NRMREAG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + E G  + PDV+T+N++I G  +   L  ++++ D M+E G   ++++ + L+    
Sbjct: 244 SSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYI 303

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  D+A  +++ +    L P + T+++M++G CK    + A  +F  ++  G  P L 
Sbjct: 304 KSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN L+  LCK   L  AR + +E+ +S   P+ I++  ++    +        E+L+ M
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++ G T D + Y + I    K+G+++EA    + M+  G+  D   Y++LI  +    ++
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483

Query: 304 EAAYLLLDEMEKQGFECD-KYTHTIL 328
           E    LL +M   G   D + T++IL
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSIL 509


>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
           Acinetobacter calcoaceticus [Arabidopsis thaliana]
          Length = 566

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 220/445 (49%), Gaps = 7/445 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANRL+KA  +I   +  G++PD   Y  L++  C+  +      ++ +M + G   +
Sbjct: 106 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 165

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+L+ G      L+ SL  ++ +++ G+ P+ ++Y+ L+   ++    DEA ++  
Sbjct: 166 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 225

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L G CK   TD+A+ +FR L   GF   +V+YNIL++ LC  G
Sbjct: 226 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 285

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFG 254
           R   A  +L E+     AP+ +TY  ++     + + +  L++L  M +  + F      
Sbjct: 286 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 345

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  VIA   K G++      +++M+    + +  +YN + +L     K++ A+ ++  + 
Sbjct: 346 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 405

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +   C    +  +I  LC+ GN   A   L  M + GFD +   Y+ ++  L  +G   
Sbjct: 406 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFT 465

Query: 375 HAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
            A+ V   ME  ++       +++M+  LCK +R   A ++    ++      ++    +
Sbjct: 466 GAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAIL 525

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
           V+G+ H      AK++  ++R+ K+
Sbjct: 526 VEGIAHEDELELAKEVLDELRLRKV 550



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 2/293 (0%)

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           LS S   L+ ++  G  P+V     L++ L +  +  +A RV + M+   + P  + +  
Sbjct: 77  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 136

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++N LCK      A+++   ++ HG+    VTYN L++GLC  G L  +   ++ L   G
Sbjct: 137 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 196

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            APNA TY+ +++  ++ R     +++L  +  KG   +   Y  ++  F K GR  +A 
Sbjct: 197 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 256

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               ++   G + ++VSYN L+   C +G+ E A  LL EM+         T+ ILI+ L
Sbjct: 257 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 316

Query: 333 CKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              G  + A   L+ M+K    F     +YN ++ RL K+GK+D  +   + M
Sbjct: 317 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 369



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 183/413 (44%), Gaps = 42/413 (10%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++   +   ++ G+ P+  TY+ L++A  +    D    +L
Sbjct: 165 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 224

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++ L  E+   G   +V SYN L+ CL   
Sbjct: 225 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 284

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--HGFVPELV 183
           G+ +EAN +  +M  GD  P   T+NI++N L  +  T+ AL++ + + K  H F     
Sbjct: 285 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 344

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YN +I  LCK G++      L E+      PN  TY  I   C  N K +    I+ ++
Sbjct: 345 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 404

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K         CT               D+               Y ++I   C++G  
Sbjct: 405 SNKQKC------CT--------------HDF---------------YKSVITSLCRKGNT 429

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNC 362
            AA+ LL EM + GF+ D +T++ LI GLC  G   GA   L  M +       ++ +N 
Sbjct: 430 FAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNA 489

Query: 363 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           ++  L K  + D A+ VFE M     + +  TY+ +V  +     L  A ++L
Sbjct: 490 MILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 542



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 6/212 (2%)

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           L+ L   GH PN    T ++    +  + K  + ++  M   G   D   Y  ++    K
Sbjct: 84  LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 143

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G +  A   +E+M   G   + V+YN L+   C  G L  +   ++ + ++G   + +T
Sbjct: 144 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 203

Query: 325 HTILIDGLCKA-GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           ++ L++   K  G  +  +L  E + K G + NL +YN ++    K+G+ D A+ +F  +
Sbjct: 204 YSFLLEAAYKERGTDEAVKLLDEIIVK-GGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 262

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
             K    +  +Y+ ++  LC   R   A+ LL
Sbjct: 263 PAKGFKANVVSYNILLRCLCCDGRWEEANSLL 294



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 4/148 (2%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L ++  ++E +VT G + ++     L+   CK  +L+ A  +++ M   G   D   +T 
Sbjct: 77  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 136

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L++ LCK GN+  A   +E M   G+ SN   YN +V  L   G ++ ++   E +  K 
Sbjct: 137 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 196

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLL 411
              ++FTYS ++    K +    A KLL
Sbjct: 197 LAPNAFTYSFLLEAAYKERGTDEAVKLL 224



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           E  L  ++  L+ +   G + +    T L+  LCKA  +K A   +E M   G   +  A
Sbjct: 74  EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 133

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  +V++L K G + +A+ + E ME      ++ TY+++V  LC    L  + + +   +
Sbjct: 134 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 193

Query: 416 KSGV 419
           + G+
Sbjct: 194 QKGL 197


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 209/448 (46%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+VTYN ++ A C+  + D     L +M  
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 282

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN+LI G +       ++ +  EM    I PDV + + LM  L + GK  E
Sbjct: 283 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++NIMLNG        +   +F  +   G  P+  T+N+LIK
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  P+ +TY T++    R  K    +E  + M  +G   
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G L +A + + +++ +G+ LDIV ++++IN  CK G++  A  + 
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G   D   +++L+DG C  G ++ A    + M   G + N+  Y  +V+   K 
Sbjct: 523 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI 582

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  M  +     +  YS ++  L +A R   A        +SG+ +     
Sbjct: 583 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTY 642

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             V+ GL  + C  EA  +  ++R   +
Sbjct: 643 NIVLRGLFKNRCFDEAIFLFKELRAMNV 670



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 195/425 (45%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  +++  N L++ +C+    D    IL +R  E G 
Sbjct: 121 CT--RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGC 178

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y+ L+           + DLL  M E G    P+V +YN+++   F+ G  ++A
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 238

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T+N +++ LCK R  D A    R +     +P   TYN LI G
Sbjct: 239 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 298

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T + +M    +  K K   ++   M  KG   D
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  D  ++N LI  Y   G L+ A ++ +
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G + D  T+  +I  LC+ G +  A      M   G   +  AYNC++      G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 478

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   +SS+++NLCK  R+  A  +    +  G+        
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 538

Query: 428 AVVDG 432
            ++DG
Sbjct: 539 MLMDG 543



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 194/413 (46%), Gaps = 4/413 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L++ + + CK  ++++A  +       G  PDV +YN++++ Y           + + M 
Sbjct: 327 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 386

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+PD  T+N LI       +L  ++ + +EM + G+ PDV +Y +++  L ++GK D
Sbjct: 387 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A   F  MI   + P    +N ++ G C +     A  +   +  +G   ++V ++ +I
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GR+  A+ I     + G  P+A+ Y+ +M       K +  L +  AM   G  
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   YCT++  + KIGR+ E      +M+  G++   + Y+ +I+   + G+   A + 
Sbjct: 567 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVK 626

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM + G   D  T+ I++ GL K      A    + +  +    N+   N ++D + +
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 686

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +++ A ++F S+     V    TYS M+ NL K   +  A  +  S   +G
Sbjct: 687 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 169/397 (42%), Gaps = 35/397 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +  +     L+KA  I  +    GV PDVVTY  +I A C+    D      N+M 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 70  EAGISPDVVTYNSLIAG-ATRNSLLS---------------------------CSL---- 97
           + G++PD   YN LI G  T  SLL                            C L    
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              ++ D  + +G+ PD   Y+ LM     +GK ++A RVF  M+   + P    +  ++
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D  L +FR + + G  P  + Y+I+I GL +AGR   A+    E+ +SG A
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +  TY  +++  F+NR +   + +   ++      +     T+I    +  R++EA D 
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              +    +   +V+Y+ +I    KEG +E A  +   M+  G E +      ++  L K
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
              I  A  +L  +++  F         +VD     G
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 160/338 (47%), Gaps = 3/338 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC    L KA+ +I + +  G+  D+V ++ +I+  C+         I +    
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD V Y+ L+ G      +  +L + D M+  GI P+V  Y +L++   ++G+ DE
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F++M+   + P T  ++I+++GL +   T  A   F  + + G   ++ TYNI+++
Sbjct: 588 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLR 647

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K      A ++ KEL       N IT  T++   F+ R+ +   ++ +++ R     
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 707

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I   +K G ++EA D    M   G + +    N ++    K+ ++  A   L
Sbjct: 708 SVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYL 767

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            +++++ F  +  T  +L+D     G     R H+ ++
Sbjct: 768 SKIDERNFSLEHLTTMLLVDLFSSKGT---CREHIRFL 802



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P   +Y  LM C  +  +P+ A   F  ++   L       N +L G C+ + TD AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +Y+IL+K LC  G+   A  +L+ + + G   +PN + Y T++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV   V 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +  +YN LI  Y   G+ + A  +  EM +     D  T ++L+  LCK G IK AR  
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 345 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 370
            + M   G + ++ +YN          C+VD            +  D             
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 371 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK D  TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEI 490



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 5/196 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L +I +    +A R   A+    +    G+  D+ TYN+++    +   FD    
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 660

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  +++T N++I G  +   +  + DL   +    + P V +Y+ ++  L 
Sbjct: 661 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 720

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  +EA  +F  M      P +   N ++  L K      A      + +  F  E +
Sbjct: 721 KEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 780

Query: 184 TYNILI-----KGLCK 194
           T  +L+     KG C+
Sbjct: 781 TTMLLVDLFSSKGTCR 796


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 216/439 (49%), Gaps = 7/439 (1%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG K   R  N  +  F +AN LEKAE+ +     +G+LP++ TYN+LI    +   F 
Sbjct: 107 IFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFV 166

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +L+ M    + PDV +Y ++I G  ++  L  +L++ DEM E G+ PDV  YN ++
Sbjct: 167 EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226

Query: 120 HCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
              F+ G   +   +++ ++ G  + P   T+N+M+NGLCK    D +L M+  ++K+  
Sbjct: 227 DGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             +L TY+ LI GLC  G +  A  + KE+       + +TY  ++    R  K K   E
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFE 346

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M ++    +   Y   I    +  +++EA    E +   G   D  +Y  LI+  C
Sbjct: 347 LWVMMGKEN-CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC 405

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G L  A  +L E +  G + D + ++ ++DGL K G +  A   +  M+K G + +  
Sbjct: 406 KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
             N +++   +  K++ AI  F  ME K       +Y+++++ LCKA+R   A   +   
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525

Query: 415 LKSGVRILKSAQKAVVDGL 433
           L+   +        ++DGL
Sbjct: 526 LEKDWKPDMITYSLLMDGL 544



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 194/394 (49%), Gaps = 6/394 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISPDV 77
           K+  L  A  +  +    G++PDV+ YN++ID + +   +  G  I  R+ +   + P+V
Sbjct: 196 KSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNV 255

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTYN +I G  +      SL++ + M +     D+++Y+SL+  L  +G  D A  V+++
Sbjct: 256 VTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKE 315

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   +     T+N +LNG C+      +  ++  + K      +V+YNI I+GL +  +
Sbjct: 316 MVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFIRGLFENRK 374

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  + + L   G   ++ TY  ++    +N      L+IL   K  G   D F Y +
Sbjct: 375 VEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSS 434

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++    K GR+ EA   + QM   G +L     N LIN + +  KLE A     EME +G
Sbjct: 435 IVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKG 494

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
                 ++  LI+GLCKA     A   ++ M +  +  ++  Y+ ++D L +  KID A+
Sbjct: 495 CSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMAL 554

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
           N++  + VK    D   ++ ++H LC A ++  A
Sbjct: 555 NLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDA 588



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 197/422 (46%), Gaps = 42/422 (9%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P+VVTYN++I+  C+   FD    +  RM++     D+ TY+SLI G      +  ++
Sbjct: 251 VYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAV 310

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++  EM++  +  DV +YN+L++   + GK  E+  ++  M+  +      ++NI + GL
Sbjct: 311 EVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWV-MMGKENCHNVVSYNIFIRGL 369

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            +NR  + A+ ++  L++ G   +  TY +LI GLCK G L  A  ILKE  D G   +A
Sbjct: 370 FENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDA 429

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
             Y++I+    +  +    L I+  M + G          +I  FV+  +L+EA  +  +
Sbjct: 430 FAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFRE 489

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EK--------------------- 315
           M T G    +VSYNTLIN  CK  +   AY  + EM EK                     
Sbjct: 490 METKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549

Query: 316 -------------QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
                        +G E D   H IL+ GLC AG I+ A L    M +     NL  +N 
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           ++D L K  + + A  ++  M  K+ F     +Y+  +  LC   R+     L    LK+
Sbjct: 610 LMDGLYKARECEMASVIWACM-FKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKN 668

Query: 418 GV 419
           G+
Sbjct: 669 GI 670



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 181/377 (48%), Gaps = 13/377 (3%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + DVV   +++    ++ + + +LD   +M E+ G  P + SYN+L++   +    ++A 
Sbjct: 77  TEDVVL--TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAE 134

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
                     + P   T+NI++    K R    A  +   +      P++ +Y  +I G+
Sbjct: 135 SFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGM 194

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            K+G L +A  +  E+ + G  P+ + Y  ++   F+   Y  G EI   + +    +  
Sbjct: 195 VKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPN 254

Query: 253 F-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I    K+GR  E+ +  E+M  +  ++D+ +Y++LI   C  G ++ A  +  
Sbjct: 255 VVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYK 314

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS--NLEAYNCIVDRLGK 369
           EM K+    D  T+  L++G C+AG IK +    E    +G ++  N+ +YN  +  L +
Sbjct: 315 EMVKRSVVVDVVTYNALLNGFCRAGKIKES---FELWVMMGKENCHNVVSYNIFIRGLFE 371

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           + K++ AI+V+E +  +    DS TY  ++H LCK   L  A K+L      G ++   A
Sbjct: 372 NRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFA 431

Query: 426 QKAVVDGLRHSGCRREA 442
             ++VDGL   G   EA
Sbjct: 432 YSSIVDGLSKQGRVDEA 448



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 178/399 (44%), Gaps = 46/399 (11%)

Query: 17  FCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC+A ++ E  E  ++ G       +VV+YN+ I    +    +   ++   +R  G   
Sbjct: 335 FCRAGKIKESFELWVMMGKE--NCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGA 392

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D  TY  LI G  +N  L+ +L +L E  + G   D ++Y+S++  L + G+ DEA  + 
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIV 452

Query: 136 QDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             M     +L+P     N ++NG  +    + A+  FR ++  G  P +V+YN LI GLC
Sbjct: 453 HQMDKYGCELSPHVC--NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLC 510

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KA R   A   +KE+ +    P+ ITY+ +M    + +K  + L +              
Sbjct: 511 KAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNL-------------- 556

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
                                  Q++  G++ D+  +N L++  C  GK+E A LL   M
Sbjct: 557 ---------------------WRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM 595

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           ++     +  TH  L+DGL KA   + A +    M K GF  ++ +YN  +  L   G+I
Sbjct: 596 KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRI 655

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
              I +F+       +  S T+  +V  + K   L S S
Sbjct: 656 SDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 122/226 (53%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS  + N  +  F +A++LE+A     +    G  P VV+YN LI+  C+   F   Y+
Sbjct: 461 ELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS 520

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +  M E    PD++TY+ L+ G  +   +  +L+L  ++L  G+ PDV  +N LMH L 
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLC 580

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             GK ++A  ++ +M   +  P   T N +++GL K R  + A  ++  + K+GF P+++
Sbjct: 581 SAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDII 640

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           +YNI +KGLC  GR+     +  +   +G  P +IT+  +++   +
Sbjct: 641 SYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLK 686



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 93/190 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA R   A + + + +     PD++TY++L+D  CQ    D    +  ++  
Sbjct: 503 NTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLV 562

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDV  +N L+ G      +  +L L   M +    P++ ++N+LM  L++  + + 
Sbjct: 563 KGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEM 622

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ ++  M      P   ++NI L GLC      + + +F    K+G +P  +T+ IL++
Sbjct: 623 ASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVR 682

Query: 191 GLCKAGRLRT 200
            + K G L +
Sbjct: 683 AVLKLGPLDS 692


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 208/442 (47%), Gaps = 4/442 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K   + KA  +  + ++ G+ PD+VTY+ ++ A C+  +       L +M   G+ PD
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G +       ++ +  EM    I PDV + N LM  L + GK  EA  VF 
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   ++ IMLNG        +   +F  +   G  P++ T+++LIK     G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  I  E+ D G  P+ +TYTT++    R  K    +E  + M  +G   D + Y 
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F   G L +A + + +++ +G++LDIV ++++IN  CK G++  A  + D     
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNV 532

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D   +++L+DG C  G ++ A    + M   G + N+  Y  +V+   K G+ID  
Sbjct: 533 GQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEG 592

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++F  M  K     +  Y+ ++  L  A R   A        +SG+ I K     V+ G
Sbjct: 593 LSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRG 652

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
              + C  EA  +  ++R   +
Sbjct: 653 FFKNRCFDEAIFLFKELRAMNV 674



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 192/389 (49%), Gaps = 4/389 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  +LPDVVT NML+ + C++        + + M   G +PDV +Y  ++ G      L 
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV 380

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              DL D ML  GI PD+++++ L+      G  D+A  +F +M    + P   T+  ++
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             LC+    D+A+  F  +   G  P+   Y+ LI+G C  G L  A+ ++ E+ ++G  
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + + +++I+    +  +      I       G   D   Y  ++  +  +G++++A   
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + MV+ G++ ++V Y TL+N YCK G+++    L  EM ++G +     + I+IDGL  
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFV 620

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFT 390
           AG    A++    M + G   N   YN ++    K+   D AI +F+   +M VK D  T
Sbjct: 621 AGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIIT 680

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            ++M+  + + +R+  A  L  S  +SG+
Sbjct: 681 LNTMIAGMFQTRRVEEAKDLFASISRSGL 709



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 190/404 (47%), Gaps = 9/404 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  D++  N L+  +C+    D    IL +R  E G 
Sbjct: 125 CT--RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGC 182

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y+ L+           + DLL  M E G    PDV +Y +++ C F+ G  ++A
Sbjct: 183 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKA 242

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T++ +++ LCK R    A    R +   G +P+  TYN LI G
Sbjct: 243 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYG 302

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T   +M    +  K K   ++   M  KG   D
Sbjct: 303 YSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 362

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  DI +++ LI  Y   G L+ A ++ +
Sbjct: 363 VFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFN 422

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G + D  T+T +I  LC+ G +  A      M   G   +  AY+C++      G
Sbjct: 423 EMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 482

Query: 372 KIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
            +  A    + +  +    D   +SS+++NLCK  R+  A  + 
Sbjct: 483 SLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 173/389 (44%), Gaps = 7/389 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD- 98
           P   TY +L+D   +    +       ++   G+  D++  N L+ G         +LD 
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIMLNG 156
           LL    E+G  PDV+SY+ L+  L   GK  +A+ + + M  G    +P    +  +++ 
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    + A  +F+ + + G  P+LVTY+ ++  LCKA  +  A   L+++ + G  P+
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++       ++K  + +   M+R     D      ++ +  K G++KEA D  +
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   D+ SY  ++N Y  +G L     L D M   G   D YT ++LI      G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A +    M   G   ++  Y  ++  L + GK+D A+  F  M       D + Y 
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            ++   C    L  A +L+L  + +G+R+
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNGMRL 501



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 35/309 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +  +     L+KA  I  +    GV PDVVTY  +I A C+    D      N+M 
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460

Query: 70  EAGISPDVVTYNSLIAG-ATRNSLLS---------------------------CSL---- 97
           + G++PD   Y+ LI G  T  SLL                            C L    
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              ++ D  + +G  PD   Y+ LM     +GK ++A RVF  M+   + P    +  ++
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D  L +FR + + G  P  + YNI+I GL  AGR   A+    E+ +SG A
Sbjct: 581 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIA 640

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N  TY  +++  F+NR +   + +   ++      D     T+IA   +  R++EA D 
Sbjct: 641 INKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 700

Query: 275 MEQMVTDGV 283
              +   G+
Sbjct: 701 FASISRSGL 709



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 167/380 (43%), Gaps = 42/380 (11%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P   +Y  LM C  +  +P+ A   F  ++   L       N +L G C+ + TD AL
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +Y+IL+K LC  G+   A  +L+ + + G   +P+ + YTT++
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            C F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV  GV 
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D  +YN LI  Y   G+ + A  +  EM +     D  T  +L+  LCK G IK AR  
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 345 LEYMNKIGFDSNLEAY----------NCIVD-------RLGKD----------------- 370
            + M   G + ++ +Y           C+VD        LG                   
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 371 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK D  TY++++  LC+  ++  A +     +  GV   K A
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              ++ G    G   +AK++
Sbjct: 471 YHCLIQGFCTHGSLLKAKEL 490



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 104/216 (48%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L     +  +   CK  R+  A+ I    + +G  PD V Y+ML+D YC     +    
Sbjct: 500 RLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALR 559

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M  AGI P+VV Y +L+ G  +   +   L L  EML+ GI P    YN ++  LF
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+   A   F +M    +     T+NI+L G  KNR  D A+ +F+ L+      +++
Sbjct: 620 VAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDII 679

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           T N +I G+ +  R+  A+ +   +  SG  P  +T
Sbjct: 680 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 6/385 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T N+LI+++C        +++L ++ + G  PD  T+N+LI G      +  
Sbjct: 141 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 200

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+ +  G  PDV +Y +LM+ L ++G    A R+ + M+  +  P    +N +++
Sbjct: 201 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 260

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TYN LI  LC     +    +L E+ +S   P
Sbjct: 261 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 320

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + ++T++    +     +  +++  M ++G   D   Y  ++        + EA    
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   ++ SYN LIN YC+  +++ A  LL++M  QG   D  T+  LI GLC  
Sbjct: 381 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 440

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++ A      M   G   +L  Y  ++D L K+  +  A+ + +++E      D   Y
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 500

Query: 392 SSMVHNLCKAKRLPSASKLL--LSC 414
           +  +  +C+A  L +A  L   LSC
Sbjct: 501 NIAIDGMCRAGELEAARDLFSNLSC 525



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 176/369 (47%), Gaps = 4/369 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F + D   +  NRM      P  V +  L+    +    S  L L  +M   GIPPDV+
Sbjct: 89  HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 148

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + N L++    L +   A  V   ++     P   TFN ++ GLC       AL +F   
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              GF P++VTY  L+ GLCK G    A  +L+ +      PN I Y TI+    ++R+ 
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                + S M  KG + D F Y ++I A   +   K  T  + +MV   +  ++V ++T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CKEG +  A+ ++D M K+G E D  T+T L+DG C    +  A    + M   G 
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             N+ +YN +++   +  ++D A+ + E M ++    D+ TY++++H LC   RL  A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 410 LLLSCLKSG 418
           L    + SG
Sbjct: 449 LFHEMVASG 457



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 191/378 (50%), Gaps = 2/378 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + +FC   RL  A +++   ++LG  PD  T+N LI   C          + ++  
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDVVTY +L+ G  +    S ++ LL  M++    P+V +YN+++  L +  +  
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +MI   ++P   T+N +++ LC      +   +   +     +P +V ++ ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGY 248
             LCK G +  A  ++  +   G  P+ +TYT +M   C R+   +  +++   M  KG 
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDE-AVKVFDTMVHKGC 388

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  + +I R+ +A   +EQM   G+  D V+YNTLI+  C  G+L+ A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM   G   D  T+ IL+D LCK  ++  A + L+ +     D+++  YN  +D + 
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 508

Query: 369 KDGKIDHAINVFESMEVK 386
           + G+++ A ++F ++  +
Sbjct: 509 RAGELEAARDLFSNLSCQ 526



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 195/414 (47%), Gaps = 4/414 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  V +  L+ +  +   +    ++  +M   GI PDV T N LI        L  +  +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  ++N+L+  L   GK  EA  +F   I     P   T+  ++NGLCK
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+R+ R + +    P ++ YN +I  LCK  ++  A  +  E+   G +P+  T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++       ++K    +L+ M       +   + TV+ A  K G +  A D ++ M+
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ D+V+Y  L++ +C   +++ A  + D M  +G   +  ++ ILI+G C+   + 
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A   LE M+  G  ++   YN ++  L   G++ HAI +F  M    ++ D  TY  ++
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             LCK   L  A  LL +   S +          +DG+  +G    A+ + S +
Sbjct: 470 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 4/274 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  ++ +A  +  + I  G+ PD+ TYN LI A C    +    T+LN M  
Sbjct: 256 NTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 315

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
           + I P+VV +++++    +  +++ + D++D M++ G+ PDV +Y +LM  HCL    + 
Sbjct: 316 SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL--RSEM 373

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA +VF  M+     P   ++NI++NG C+ +  D A+ +   +   G + + VTYN L
Sbjct: 374 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 433

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC  GRL+ A  +  E+  SG  P+ +TY  ++    +N      + +L A++    
Sbjct: 434 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
             D   Y   I    + G L+ A D    +   G
Sbjct: 494 DADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 102/198 (51%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   +  A  ++   I+ GV PDVVTY  L+D +C     D    + + M   G  P+
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V +YN LI G  +   +  ++ LL++M   G+  D  +YN+L+H L  +G+   A  +F 
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P   T+ I+L+ LCKN +   A+ + + ++      +++ YNI I G+C+AG
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511

Query: 197 RLRTARWILKELGDSGHA 214
            L  AR +   L   G A
Sbjct: 512 ELEAARDLFSNLSCQGFA 529



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 111/211 (52%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV ++ ++DA C+       + +++ M + G+ PDVVTY +L+ G    S +  ++
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            + D M+  G  P+V SYN L++   Q+ + D+A  + + M    L   T T+N +++GL
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           C      +A+ +F  +   G +P+LVTY IL+  LCK   L  A  +LK +  S    + 
Sbjct: 438 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 497

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + Y   +    R  + +   ++ S +  +G+
Sbjct: 498 LVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  NI +  +C+  R++KA  ++      G++ D VTYN LI   C          + 
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M  +G  PD+VTY  L+    +N  L+ ++ LL  +    +  D+  YN  +  + + 
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 510

Query: 126 GKPDEANRVFQDMIC 140
           G+ + A  +F ++ C
Sbjct: 511 GELEAARDLFSNLSC 525


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 207/414 (50%), Gaps = 9/414 (2%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG K   R  N  +  F + N  ++AE+       + V P++ TYN+LI   C+    +
Sbjct: 109 IFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIE 168

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
              ++L+ M    + PDV +Y +LI G  +   L  +L + DEM   G+  DV  YN L+
Sbjct: 169 KAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLI 228

Query: 120 HCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
              F+ G  D+   +++ ++  C  + P   T+NIM+NGLCK    D +L ++  + K+ 
Sbjct: 229 DGFFKHGDYDKGKEIWERLVKDCS-VYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNE 287

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
              ++ TY+ LI GLC+AG +  A  + KE+ +S    +A+T+  ++    R  K K   
Sbjct: 288 REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESF 347

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           E+   M ++        Y  +I    + G+++EA    E +   G + +  +Y  LI+  
Sbjct: 348 ELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGL 406

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK G+L  A  +  E E    + D Y ++ ++DGLCK G +  A   +  M+K G+  + 
Sbjct: 407 CKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDP 466

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSA 407
              N +++   +  K++ AIN F  ME K       +Y++++  LCKA+R   A
Sbjct: 467 HVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEA 520



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 208/424 (49%), Gaps = 41/424 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC 95
           GV+ DV  YNMLID + +   +D G  I  R+ ++  + P+VVTYN +I G  +      
Sbjct: 216 GVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDE 275

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           SL++ + M +     D+++Y+SL+H L + G  D A RV+++++   L     T N MLN
Sbjct: 276 SLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLN 335

Query: 156 GLCK----------------------------------NRYTDNALRMFRGLQKHGFVPE 181
           G C+                                  N   + A+ ++  L K G  PE
Sbjct: 336 GFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPE 395

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
             TY +LI GLCK GRL  A  I KE  D     +A  Y++++    +  +    + I++
Sbjct: 396 STTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVN 455

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M ++GY  D      +I  FV+  +L++A ++  +M   G    IVSYNTLI   CK  
Sbjct: 456 QMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAE 515

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAY 360
           +   AY  + EM ++ ++ D  T ++L+DGLC+   I+ A  L  + ++K GF  ++  Y
Sbjct: 516 RFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK-GFKPDITMY 574

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++  L    K++ A+ ++  M+    V +  T ++++  L K +    AS++    LK
Sbjct: 575 NILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILK 634

Query: 417 SGVR 420
            G+ 
Sbjct: 635 DGLH 638



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 184/377 (48%), Gaps = 13/377 (3%)

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEA---NRVFQD 137
           ++I    +N + + +LD    M ++ G  P V SYN+L++   +L + D A   +R F+ 
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M   D++P   T+NI++   CK +  + A+ +   +      P++ +Y  LI G+ K G 
Sbjct: 145 M---DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGD 201

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF-GYC 256
           L  A  +  E+   G   +   Y  ++   F++  Y  G EI   + +    +     Y 
Sbjct: 202 LLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYN 261

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K GR  E+ +  E+M  +  + D+ +Y++LI+  C+ G ++ A  +  E+ + 
Sbjct: 262 IMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVES 321

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  TH  +++G C+AG IK +      M K    + + +YN ++  L ++GK++ A
Sbjct: 322 SLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEA 380

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I+++E +  K    +S TY  ++H LCK  RL  A K+         ++   A  ++VDG
Sbjct: 381 ISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDG 440

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G   EA  I +++
Sbjct: 441 LCKEGRMDEAISIVNQM 457



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 131/278 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RL KA  I  +        D   Y+ ++D  C+    D   +I+N+M + G   D
Sbjct: 406 LCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLD 465

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N LI G  R S L  +++   EM   G  P + SYN+L+  L +  +  EA    +
Sbjct: 466 PHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVK 525

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   T +++++GLC+ +  + AL +++     GF P++  YNIL+ GLC   
Sbjct: 526 EMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVC 585

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +   +  S   PN +T  T+M+  ++ R Y+   EI   + + G   D   Y 
Sbjct: 586 KLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYN 645

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             I       R+ +A +++   +  G+    V++N L+
Sbjct: 646 ITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 154/334 (46%), Gaps = 6/334 (1%)

Query: 17  FCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC+A ++ E  E  ++ G        VV+YN+LI    +    +   +I   + + G  P
Sbjct: 337 FCRAGKIKESFELWMVMGKE--NCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRP 394

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TY  LI G  +N  L+ +L +  E  +     D ++Y+S++  L + G+ DEA  + 
Sbjct: 395 ESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIV 454

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M            N ++NG  +    ++A+  FR ++  G  P +V+YN LIKGLCKA
Sbjct: 455 NQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKA 514

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A   +KE+ +    P+ IT + +M    + +K ++ L +      KG+  D   Y
Sbjct: 515 ERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMY 574

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++     + +L++A      M       ++V+ NTL+    K    E A  + D + K
Sbjct: 575 NILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILK 634

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            G   D  ++ I I GLC    I  A   +E++N
Sbjct: 635 DGLHPDIISYNITIKGLCSCSRISDA---IEFLN 665



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 113/228 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL   + N  +  F +A++LE A     +    G  P +V+YN LI   C+   F   Y+
Sbjct: 463 KLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYS 522

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +  M E    PD++T + L+ G  +   +  +L+L  + L+ G  PD+  YN LMH L 
Sbjct: 523 FVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLC 582

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + K ++A +++  M      P   T N ++ GL K R  + A  ++  + K G  P+++
Sbjct: 583 SVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDII 642

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
           +YNI IKGLC   R+  A   L +  + G  P A+T+  +++     R
Sbjct: 643 SYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFR 690



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 182/408 (44%), Gaps = 42/408 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A  ++ A  +  + +   ++ D VT+N +++ +C+       + +   M +      
Sbjct: 302 LCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT- 360

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN LI G   N  +  ++ + + + + G  P+  +Y  L+H L + G+ ++A ++F+
Sbjct: 361 VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK 420

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +   G        ++ M++GLCK    D A+ +   + K G+  +    N LI G  +A 
Sbjct: 421 EAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRAS 480

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A    +E+   G +P  ++Y T++K                            G C
Sbjct: 481 KLEDAINFFREMECKGCSPTIVSYNTLIK----------------------------GLC 512

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                  K  R  EA  ++++M+    + D+++ + L++  C+E K+E A  L  +   +
Sbjct: 513 -------KAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDK 565

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF+ D   + IL+ GLC    ++ A     +M +     NL   N +++ L K    + A
Sbjct: 566 GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKA 625

Query: 377 INVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             +++ + +KD       +Y+  +  LC   R+  A + L   L  G+
Sbjct: 626 SEIWDCI-LKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGI 672


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 199/412 (48%), Gaps = 34/412 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V  +C+   + KA   I      G+ P+ +T+N LID +C     D     + +M
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G++P V TYN+LI G  +         +L++M E+G+ P+V SY SL++CL + GK 
Sbjct: 448 AEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  V +DMIC  + P    +N++++G C      +ALR F  + +    P LVTYN+L
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVL 567

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----------KC-----CFRN--- 230
           I GLCK G+L  A   L ++  SGH+P+ ITY +++          KC       +N   
Sbjct: 568 IDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627

Query: 231 ----RKY--------KLGLEIL----SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
               R Y        K G+E++    + M +     D   Y  +I  + +IG  ++A   
Sbjct: 628 KPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSL 687

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + M+  G+  D ++YN+LI  + +EGKL     L++ M+ +       T+ IL+ G C 
Sbjct: 688 HQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCD 747

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
             +  GA +    M +  F  N    N +   L ++G++     +   M VK
Sbjct: 748 LKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVK 799



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 4/393 (1%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +  +G   D   Y   I  A +   L   ++ LD M + G+ P+V+ YN L+  L +  
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A ++F +M   +L     T+N +++G CK    D A +M   +++    P ++T+N
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ GLCK  +++ AR +LKE+  +G  P+  TY+ +     R       +E+      K
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + +    ++    K G++++A + +++   +G+  D V YNT +N YC+ G +  A
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            L ++ ME  G   +  T   LID  C    +  A   ++ M + G   ++E YN ++D 
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465

Query: 367 LGKDGKIDHAINVFESME---VKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            GK    D    + E ME   VK +  +Y S+++ LCK  ++  A  +L   +  GV   
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                 ++DG    G  ++A +   ++  ++IS
Sbjct: 526 AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 193/432 (44%), Gaps = 5/432 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  ++++A +++ +    G +PD  TY++L D   +    +    +  +  
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E GI  +  T + L+ G  +   +  + ++L +  E G+  D   YN+ ++   ++G  +
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A    + M    L P + TFN +++  C  +  D A    + + + G  P + TYN LI
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K         IL+++ + G  PN ++Y +++ C  ++ K      +L  M  +G  
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL 523

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I     +G++K+A  + ++M+   +   +V+YN LI+  CK+GKL  A   
Sbjct: 524 PNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDF 583

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L ++   G   D  T+  LI G   AGN+       E M  +G    +  Y+ ++    K
Sbjct: 584 LTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK 643

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G I+    ++  M     + D   Y++M+H   +      A  L    L  G+   K  
Sbjct: 644 EG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMT 702

Query: 426 QKAVVDGLRHSG 437
             +++ G    G
Sbjct: 703 YNSLILGHFREG 714



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 1/220 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + ++ N+ +   C   +++ A     + +R  + P +VTYN+LID  C+          L
Sbjct: 525 NAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFL 584

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            ++  +G SPDV+TYNSLI+G      +S  L L + M  +GI P V +Y+ L+    + 
Sbjct: 585 TQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKE 644

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  +   +++ +M+  +L P    +N M++   +   T  A  + +G+   G  P+ +TY
Sbjct: 645 G-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTY 703

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           N LI G  + G+L   + ++  +     AP A TY  ++K
Sbjct: 704 NSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 229/487 (47%), Gaps = 44/487 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +LN C    CK  R + A  +I      G+  DV TYNMLID  C+      GY +L +M
Sbjct: 16  ILNWC----CKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKM 71

Query: 69  REAGISPDVVTYNSL---------IAGATR--NSLLSCSLD------------------- 98
           R+  I+P+  TYN+L         I GATR  N +L  +L                    
Sbjct: 72  RKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNF 131

Query: 99  -----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                LLD M   G+ PD  +Y +L+  L +L K D A  + + +    +      +  M
Sbjct: 132 EQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAM 191

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++GLCK+   D +L++   + K G  P+++T+++LI G CKAG+++ A+ ++ ++  +G 
Sbjct: 192 IDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGL 251

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           APN + Y T++    +           + M R G+  D F    +I++  + GR+ EA D
Sbjct: 252 APNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAED 311

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           +M  M T  +  + ++++ +IN Y   G    A+ + DEM K G     +T+  L+ GLC
Sbjct: 312 FMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLC 371

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
           K GN++ A+  L  ++ I    +   YN I+    K GK+  A+ +F  M     + DS 
Sbjct: 372 KGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSH 431

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSG-VRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           TY+ ++  L +  ++  A       L  G +   K    ++ DGL   G    A  I  +
Sbjct: 432 TYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEE 491

Query: 449 IRMAKIS 455
           +    I+
Sbjct: 492 MEHKGIN 498



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 192/379 (50%), Gaps = 4/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P +VTYN +++  C+   + A   +++RM   GI  DV TYN LI    +N+  +  
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             LL +M +  I P+ ++YN+L++ L +  K   A RVF +M+  +L+P   T+NI+++G
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C     + ALR+   ++  G  P+ V Y  L+ GL K  +   A+ +++ +  SG    
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              YT ++    ++      L++L  M + G + D   +  +I  F K G++K A + + 
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+  + V Y TLI   CK+G +  A+     M + G + D +   +LI  LC+AG
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A   + +M+ I    N   ++CI++  G  G    A ++F+ M         FTY 
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYG 364

Query: 393 SMVHNLCKAKRLPSASKLL 411
           S++  LCK   L  A KLL
Sbjct: 365 SLLKGLCKGGNLREAKKLL 383



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 198/486 (40%), Gaps = 50/486 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C     E+A  ++      G+ PD V Y  L+    +   FD   +++ R+R 
Sbjct: 119 NILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRM 178

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+      Y ++I G  ++ LL  SL LLD M + G  PD+ +++ L++   + GK   
Sbjct: 179 SGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKN 238

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V   M    L P    +  ++   CK      A R +  + + G   +    N+LI 
Sbjct: 239 AKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLIS 298

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG-----LEILSAMKR 245
            LC+AGR+  A   ++ +     APN+IT+      C  N    LG       +   M +
Sbjct: 299 SLCRAGRVAEAEDFMRHMSTIDLAPNSITFD-----CIINGYGILGDALKAFSMFDEMIK 353

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G+    F Y +++    K G L+EA   + ++      +D   YNT+++  CK GKL  
Sbjct: 354 LGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSD 413

Query: 306 AYLLLDEMEKQGFECDKYTHTI------------------------------------LI 329
           A  L  EM +     D +T+ I                                    L 
Sbjct: 414 AVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLF 473

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD---RLGKDGKIDHAINVFESMEVK 386
           DGL K G    A    E M   G + +  A N ++D   R+GK  K++      +S  + 
Sbjct: 474 DGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLT 533

Query: 387 DSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            S  TY+ ++H   K K L   SK      + G+   K    +++ GL  SG      K+
Sbjct: 534 PSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKM 593

Query: 446 QSKIRM 451
             K+ M
Sbjct: 594 LKKMIM 599



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 191/422 (45%), Gaps = 5/422 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   L +A+ ++     +    D   YN ++   C+         +   M +  + PD
Sbjct: 370 LCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPD 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             TY  ++AG +R   +  +L   ++ L  G + P+   Y SL   LF++G+ + A+ ++
Sbjct: 430 SHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIY 489

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M    + P T   N +L+G  +    +   ++F  +Q     P L TYNIL+ G  K 
Sbjct: 490 EEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKK 549

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             L         +   G +P+ +T  +I+    ++    +G ++L  M  +    D    
Sbjct: 550 KDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTL 609

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    +  ++ +A D +      G+  D+ +YN +     +   L  ++LLL +M +
Sbjct: 610 NMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLE 669

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G       +  LI+G+C+ G+I+GA    + M  IG  S   A + +V  L + GK++ 
Sbjct: 670 RGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEE 729

Query: 376 AINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+ V + M  K       T+++++H LCK  +L  A KL       GV++   A   ++ 
Sbjct: 730 AMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLIS 789

Query: 432 GL 433
           GL
Sbjct: 790 GL 791



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 178/400 (44%), Gaps = 5/400 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           + T + N  +   CK  +L  A A+  + ++  VLPD  TY +++    +          
Sbjct: 393 VDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLF 452

Query: 65  LNRMREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             +    G +SP+ V Y SL  G  +    + +  + +EM   GI PD  + N+++    
Sbjct: 453 FEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYS 512

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++GK ++  ++F  M  G LTP  AT+NI+L+G  K +      + +  + + G  P+ +
Sbjct: 513 RMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKL 572

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T + +I GLCK+G L     +LK++       + +T   ++       K     ++L+  
Sbjct: 573 TCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIK 632

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   D   Y  +     +   L+E+   +  M+  G+      Y +LIN  C+ G +
Sbjct: 633 NLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDI 692

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A+ L DEME  G        + ++ GL + G ++ A L L+ M +      +  +  +
Sbjct: 693 QGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTL 752

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
           +  L K  K+  A+ +   M +     D   Y+ ++  LC
Sbjct: 753 MHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLC 792



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 160/346 (46%), Gaps = 3/346 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSC 95
           G+ PD +  N ++D Y +    +    +  +M+   ++P + TYN L+ G + +  LL C
Sbjct: 496 GINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKC 555

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           S    + M  MGI PD  + +S++  L + G  D   ++ + MI  D      T N+++ 
Sbjct: 556 S-KFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLIT 614

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C+      A  +       G +P++ TYN +  GL +A  LR +  +L ++ + G  P
Sbjct: 615 NSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITP 674

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
            +  Y +++    R    +    +   M+  G +        ++    + G+++EA   +
Sbjct: 675 TSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVL 734

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M+   +   + ++ TL+++ CK+ KL  A  L  +M   G + D   + +LI GLC  
Sbjct: 735 DCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCAD 794

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG-KDGKIDHAINVF 380
           G+   A    E M + G   N   Y  ++D +   +G+++  + V+
Sbjct: 795 GDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVY 840



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ +   C+ +++ KA  ++     LG++PDV TYN +     +  +    + +L+ M 
Sbjct: 609 LNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDML 668

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E GI+P    Y SLI G  R   +  +  L DEM  +G+     + ++++  L Q GK +
Sbjct: 669 ERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVE 728

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  V   M+   L P  ATF  +++ LCK      AL++   +  +G   ++V YN+LI
Sbjct: 729 EAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLI 788

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            GLC  G    A  + +E+ + G  PN  TY T++     N 
Sbjct: 789 SGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNE 830



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 141/322 (43%), Gaps = 35/322 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  + K   L K         R+G+ PD +T + +I   C+    D G+ +L +M  
Sbjct: 540 NILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIM 599

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
                D +T N LI  +     +  + DLL+    +GI PDV +YN++   L +     E
Sbjct: 600 EDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRE 659

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           ++ +  DM+   +TP +  +  ++NG+C+      A R+   ++  G     V  + +++
Sbjct: 660 SHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVR 719

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G++  A  +L  +      P   T+TT+M                          
Sbjct: 720 GLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMH------------------------- 754

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                        K  +L EA     +M   GV+LD+V+YN LI+  C +G   AA+ L 
Sbjct: 755 ----------MLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLY 804

Query: 311 DEMEKQGFECDKYTHTILIDGL 332
           +EM+++G   +  T+  LID +
Sbjct: 805 EEMKERGLWPNTTTYCTLIDAI 826


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 202/448 (45%), Gaps = 40/448 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN---- 66
           N  V  +CK   +E+A   +   +  G+ PD  TY  LI  YCQ    D+ + +      
Sbjct: 222 NKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL 281

Query: 67  -------------------------------RMREAGISPDVVTYNSLIAGATRNSLLSC 95
                                          +M++    P V TY  LI     +   S 
Sbjct: 282 KGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSE 341

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L+L+ EM E GI P++ +Y  L+  L    K ++A  +   M+   L P   T+N ++N
Sbjct: 342 ALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALIN 401

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK    ++AL +   ++     P   TYN LIKG CK   +  A  +L ++ +    P
Sbjct: 402 GYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLP 460

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY +++    R+  +     +LS M  +G   D + Y ++I +  K  R++EA D  
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + +    V  ++V Y  LI+ YCK GK+  A+L+L++M  +    +  T   LI GLC  
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
           G +K A L  E M KI     +     ++ RL KDG  DHA   F+ M       D+ TY
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ +   C+  RL  A  ++    ++GV
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKENGV 668



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 198/392 (50%), Gaps = 5/392 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           +++ + + ++ +   V P++ TYN +++ YC+  + +     ++ + EAG+ PD  TY S
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTS 258

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI G  +   L  +  +  EM   G   +  +Y  L+H L    + DEA  +F  M   D
Sbjct: 259 LIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD 318

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   T+ +++  LC +     AL + + +++ G  P + TY +LI  LC   +L  AR
Sbjct: 319 CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAR 378

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L ++ + G  PN ITY  ++    +    +  L+++  M+ +    +   Y  +I  +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY 438

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K   + +A   + +M+   V  D+V+YN+LI+  C+ G  ++AY LL  M  +G   D 
Sbjct: 439 CK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDP 497

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +T+T +ID LCK+  ++ A    + + +     N+  Y  ++D   K GK++ A  + E 
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEK 557

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           M  K    +S T+++++H LC   +L  A+ L
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 206/457 (45%), Gaps = 57/457 (12%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ----------------- 54
           + + + C   +LEKA  ++   +  G++P+V+TYN LI+ YC+                 
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422

Query: 55  --------FVSFDAGYT---------ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
                   +     GY          +LN+M E  + PDVVTYNSLI G  R+     + 
Sbjct: 423 NLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL  M + G+ PD W+Y S++  L +  + +EA  +F  +   D+ P    +  +++G 
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    + A  M   +     +P  +T+N LI GLC  G+L+ A  + +++      P  
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            T T ++    ++  +         M   G   D   Y T I  + + GRL++A D + +
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC--KA 335
           M  +GV  D+ +Y++LI  Y   G+  +A+++L  M   G E  ++T   LI  L   K 
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 336 GNIKGARLH----------------LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           G +KG                    LE M + G   N ++Y  ++  + + G +  A  V
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782

Query: 380 FESMEVKDSFTYSSMVHNL-----CKAKRLPSASKLL 411
           F+ M+ K+  + S +V N      CK ++   A+K++
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVV 819



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN+L+    R  L+     +  EMLE  + P++++YN +++   ++G  +EAN+    ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              L P   T+  ++ G C+ +  D+A ++F+ +   G     V Y  LI GLC   R+ 
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  +  ++ D    P   TYT ++K    + +    L ++  M+ KG   +   Y  +I
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
            +     +L++A + + QM+  G+  ++++YN LIN YCK G +E A  +++ ME +   
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +  T+  LI G CK  N+  A   L  M +     ++  YN ++D   + G  D A  +
Sbjct: 426 PNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 380 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
              M     V D +TY+SM+ +LCK+KR+  A  L  S  +  V        A++DG   
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544

Query: 436 SGCRREAKKIQSKI 449
           +G   EA  +  K+
Sbjct: 545 AGKVNEAHLMLEKM 558



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 192/432 (44%), Gaps = 55/432 (12%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  N  +  +CK N + KA  ++   +   VLPDVVTYN LID  C+  +FD+ Y +L
Sbjct: 427 NTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M + G+ PD  TY S+I    ++  +  + DL D + +  + P+V  Y +L+    + 
Sbjct: 486 SLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK +EA+ + + M+  +  P + TFN +++GLC +     A  +   + K    P + T 
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI  L K G    A    +++  SG  P+A TYTT ++   R  + +   ++++ MK 
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEA---------------------------------- 271
            G + D F Y ++I  +  +GR   A                                  
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKV 725

Query: 272 -------------------TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
                               + +E+MV  GV  +  SY  L+   C+ G L  A  + D 
Sbjct: 726 KGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDH 785

Query: 313 ME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M+ K+G    +     L+   CK      A   ++ M  +G    LE+   ++ RL K G
Sbjct: 786 MQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKG 845

Query: 372 KIDHAINVFESM 383
           + +   +VF+++
Sbjct: 846 EKERGTSVFQNL 857



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 194/404 (48%), Gaps = 24/404 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK+ R+E+A  +     +  V+P+VV Y  LID YC+    +  + +L +M      P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLP 565

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + +T+N+LI G   +  L  +  L ++M+++ + P V +   L+H L + G  D A R F
Sbjct: 566 NSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRF 625

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q M+     P   T+   +   C+     +A  M   ++++G  P+L TY+ LIKG    
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDL 685

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMK-----------------CCFRNR-KYKLGL 237
           GR  +A  +LK + D+G  P+  T+ +++K                 C   N  ++ + +
Sbjct: 686 GRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVV 745

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT---DYMEQMVTDGVQLDIVSYNTLI 294
           E+L  M   G T +   Y  ++    +IG L+ A    D+M+Q   +G+    + +N L+
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQ--KEGISPSELVFNALL 803

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK  K   A  ++D+M   G      +  ILI  L K G  +      + + + G+ 
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
            +  A+  I+D +GK G ++    +F  ME K+  T+SS  ++L
Sbjct: 864 DDELAWKIIIDGVGKQGLVEAFYELFNVME-KNGCTFSSQTYSL 906



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 150/341 (43%), Gaps = 19/341 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   +L++A  +    +++ + P V T  +LI    +   FD  Y    +M 
Sbjct: 570 FNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQML 629

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G  PD  TY + I    R   L  + D++ +M E G+ PD+++Y+SL+     LG+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTN 689

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT------------------DNALRMFR 171
            A  V + M      P   TF  ++  L + +Y                   D  + +  
Sbjct: 690 SAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLE 749

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAITYTTIMKCCFRN 230
            + +HG  P   +Y  L+ G+C+ G LR A  +   +    G +P+ + +  ++ CC + 
Sbjct: 750 KMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKL 809

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
            K+    +++  M   G+         +I    K G  +  T   + ++  G   D +++
Sbjct: 810 EKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAW 869

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             +I+   K+G +EA Y L + MEK G      T+++LI+G
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 199/399 (49%), Gaps = 8/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+ +A  ++   +  G +P V+TY  L+   C+    D    +L R+ E     +
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----N 310

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV +N++I G      L+ + +L + M   G  PD  +Y+ LMH L +LG+   A R+ +
Sbjct: 311 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 370

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+ I+L+  CKN   D+   +   +   G       YN +I  LCK G
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  +++E+   G  P+  +Y TI+     N + +    +   +  +G   +G  Y 
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I A ++ GR ++A    ++M+  G  LD+VSYN LI   CK+G ++ + +LL+EM ++
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++ ILI  LCK   ++ A    + M   G   ++  YN +++ L K G +  A
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +N+ E +  +    D  TY+ ++   CK + L  A+ LL
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 35/447 (7%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P   T+ +   A C+    D    +L  M   G  PD V Y ++I        ++ + 
Sbjct: 171 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL+EML MG   DV +++ ++  +  LG+  EA R+   M+     P   T+  +L GL
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290

Query: 158 CKNRYTDNALRM-------------------------------FRGLQKHGFVPELVTYN 186
           C+ R  D A  M                               +  +   G  P+  TY+
Sbjct: 291 CRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 350

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           IL+ GLCK GR+ +A  +L+E+   G APN +TYT ++    +N  +     +L  M  K
Sbjct: 351 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 410

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T +  GY  +I A  K GR+ EA   +++M + G   DI SYNT+I   C   ++E A
Sbjct: 411 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 470

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + + + ++G   +  T+  +I  L + G  + A    + M   G   ++ +YN ++  
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 530

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           + KDG +D ++ + E M  K    ++ +Y+ ++  LCK +R+  A +L    L  G+   
Sbjct: 531 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 590

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 +++GL   G    A  +  K+
Sbjct: 591 IVTYNTLINGLCKMGWMHAALNLLEKL 617



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 164/301 (54%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  R+  A  ++ +  + G  P+VVTY +++ ++C+   +D    +L  M  
Sbjct: 350 SILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ +   YN +I    ++  +  ++ L+ EM   G  PD+ SYN++++ L    + +E
Sbjct: 410 KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEE 469

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++++   +     T+N +++ L ++    +A+R+ + +  HG   ++V+YN LIK
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            +CK G +  +  +L+E+ + G  PN ++Y  ++    + R+ +  LE+   M  +G   
Sbjct: 530 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 589

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K+G +  A + +E++  + V  DI++YN LI+ +CK   L+ A +LL
Sbjct: 590 DIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649

Query: 311 D 311
           +
Sbjct: 650 N 650



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 114/220 (51%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+++  N  +   CK  R+++A  +I +    G  PD+ +YN +I   C     +    +
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              + E G+  + +TYN++I    R+     ++ L  EM+  G   DV SYN L+  + +
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D +  + ++M    + P   ++NI+++ LCK R   +AL + + +   G  P++VT
Sbjct: 534 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVT 593

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           YN LI GLCK G +  A  +L++L +    P+ ITY  ++
Sbjct: 594 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 37/307 (12%)

Query: 96  SLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIM 153
           +L LLD++    G+ P   SYN ++  L +     +A  +++ M+  D + P T TF + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
              LC+    D AL + RG+ +HG VP+ V Y  +I  LC  G +  A  +L E+   G 
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           A +  T+  +++      + +    ++  M  KG       Y  ++    ++ +  EA  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M+    +L++V +NT+I     EGKL  A  L + M  +G + D +T++IL+ GLC
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
           K G I  A   L  M K GF                      A NV          TY+ 
Sbjct: 358 KLGRIGSAVRLLREMEKKGF----------------------APNVV---------TYTI 386

Query: 394 MVHNLCK 400
           ++H+ CK
Sbjct: 387 VLHSFCK 393


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 209/448 (46%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+VTYN ++ A C+  + D     L +M  
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 295

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN+LI G +       ++ +  EM    I PDV + + LM  L + GK  E
Sbjct: 296 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 355

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++NIMLNG        +   +F  +   G  P+  T+N+LIK
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  P+ +TY T++    R  K    +E  + M  +G   
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G L +A + + +++ +G+ LDIV ++++IN  CK G++  A  + 
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G   D   +++L+DG C  G ++ A    + M   G + N+  Y  +V+   K 
Sbjct: 536 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI 595

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  M  +     +  YS ++  L +A R   A        +SG+ +     
Sbjct: 596 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTY 655

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             V+ GL  + C  EA  +  ++R   +
Sbjct: 656 NIVLRGLFKNRCFDEAIFLFKELRAMNV 683



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 195/425 (45%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  +++  N L++ +C+    D    IL +R  E G 
Sbjct: 134 CT--RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGC 191

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y+ L+           + DLL  M E G    P+V +YN+++   F+ G  ++A
Sbjct: 192 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKA 251

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T+N +++ LCK R  D A    R +     +P   TYN LI G
Sbjct: 252 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 311

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T + +M    +  K K   ++   M  KG   D
Sbjct: 312 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  D  ++N LI  Y   G L+ A ++ +
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 431

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G + D  T+  +I  LC+ G +  A      M   G   +  AYNC++      G
Sbjct: 432 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 491

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   +SS+++NLCK  R+  A  +    +  G+        
Sbjct: 492 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 551

Query: 428 AVVDG 432
            ++DG
Sbjct: 552 MLMDG 556



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 195/413 (47%), Gaps = 4/413 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L++ + + CK  ++++A  +       G  PDV +YN++++ Y           + + M 
Sbjct: 340 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 399

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+PD  T+N LI       +L  ++ + +EM + G+ PDV +Y +++  L ++GK D
Sbjct: 400 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 459

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A   F  MI   + P    +N ++ G C +     A  +   +  +G   ++V ++ +I
Sbjct: 460 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 519

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK GR+  A+ I     + G  P+A+ Y+ +M       K +  L +  AM   G  
Sbjct: 520 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 579

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   YCT++  + KIGR+ E      +M+  G++   + Y+ +I+   + G+   A + 
Sbjct: 580 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMK 639

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM + G   D  T+ I++ GL K      A    + +  +    N+   N ++D + +
Sbjct: 640 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 699

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +++ A ++F S+     V +  TYS M+ NL K   +  A  +  S   +G
Sbjct: 700 TRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 166/379 (43%), Gaps = 35/379 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +  +     L+KA  I  +    GV PDVVTY  +I A C+    D      N+M 
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 70  EAGISPDVVTYNSLIAG-ATRNSLLS---------------------------CSL---- 97
           + G++PD   YN LI G  T  SLL                            C L    
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              ++ D  + +G+ PD   Y+ LM     +GK ++A RVF  M+   + P    +  ++
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D  L +FR + + G  P  + Y+I+I GL +AGR   A+    E+ +SG A
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +  TY  +++  F+NR +   + +   ++      +     T+I    +  R++EA D 
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              +    +  ++V+Y+ +I    KEG +E A  +   M+  G E +      ++  L K
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769

Query: 335 AGNIKGARLHLEYMNKIGF 353
              I  A  +L  +++  F
Sbjct: 770 KNEIVRAGAYLSKIDERNF 788



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 157/329 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC    L KA+ +I + +  G+  D+V ++ +I+  C+         I +    
Sbjct: 481 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 540

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD V Y+ L+ G      +  +L + D M+  GI P+V  Y +L++   ++G+ DE
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F++M+   + P T  ++I+++GL +   T  A   F  + + G   ++ TYNI+++
Sbjct: 601 GLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLR 660

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K      A ++ KEL       N IT  T++   F+ R+ +   ++ +++ R     
Sbjct: 661 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 720

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I   +K G ++EA D    M   G + +    N ++    K+ ++  A   L
Sbjct: 721 NVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYL 780

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +++++ F  +  T  +L+D     G  +
Sbjct: 781 SKIDERNFSLEHLTAMLLVDLFSSKGTCR 809



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P   +Y  LM C  +  +P+ A   F  ++   L       N +L G C+ + TD AL
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +Y+IL+K LC  G+   A  +L+ + + G   +PN + Y T++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV   V 
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +  +YN LI  Y   G+ + A  +  EM +     D  T ++L+  LCK G IK AR  
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 345 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 370
            + M   G + ++ +YN          C+VD            +  D             
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 371 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK D  TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEI 503



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 5/196 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L +I +    +A R   A+    +    G+  D+ TYN+++    +   FD    
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 673

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  +++T N++I G  +   +  + DL   +    + P+V +Y+ ++  L 
Sbjct: 674 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLI 733

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  +EA  +F  M      P +   N ++  L K      A      + +  F  E +
Sbjct: 734 KEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 793

Query: 184 TYNILI-----KGLCK 194
           T  +L+     KG C+
Sbjct: 794 TAMLLVDLFSSKGTCR 809


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 208/420 (49%), Gaps = 6/420 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+ PD    N++I++ C       G+++L  M + G+ P VVT+  LI G      +  
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +++L+D + + G   DV +Y  L++ L ++GK  EA    + M   +  P    ++ +++
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK+     AL +   +   G  P LVTY  LI+GLC  GR + A  +L E+   G  P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  +   ++    +  K      ++  M   G   D F Y ++I  +    ++ EAT   
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E MV+ G   DIV+Y +LI+ +CK   +  A  LLDEM K GF  D  T T LI G C+ 
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQV 404

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G    A+     M+K G   NL+    I+D L K   +  A+++F +ME      +   Y
Sbjct: 405 GRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           S ++  +C A +L +A + L SCL + G++I   A   +++G    G   +A+ + S + 
Sbjct: 465 SIILDGMCSAGKLNTALE-LFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNME 523



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 209/437 (47%), Gaps = 10/437 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  T +LN+ + + C    +    +++   ++LG+ P VVT+ +LI+  C  V  D G  
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLC--VKGDVGRA 165

Query: 64  I--LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           +  ++ + + G   DV TY  LI G  +    S ++  L +M E    P+V  Y+++M  
Sbjct: 166 VELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDG 225

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L + G   EA  +  +M    + P   T+  ++ GLC       A  +   + K G +P+
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEIL 240
           L + NIL+  LCK G++  A+ ++  +   G  P+  TY +++ + C +N+  +    + 
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE-ATRVF 344

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G   D   Y ++I  + KI  + +A   +++M+  G   D+V++ TLI  +C+ 
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQV 404

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+  AA  L   M K G   +  T  I++DGLCK+  +  A      M K   D N+  Y
Sbjct: 405 GRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           + I+D +   GK++ A+ +F  +  K    + + Y+ M++   K   L  A  LL +  +
Sbjct: 465 SIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEE 524

Query: 417 SGVRILKSAQKAVVDGL 433
           +G           V GL
Sbjct: 525 NGCMPDSCTYNVFVQGL 541



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 153/323 (47%), Gaps = 35/323 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI V   CK  ++ +A+++I   I +G +PDV TYN LID YC     D    +   M 
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD+V Y SLI G  +   ++ ++ LLDEM+++G  PDV ++ +L+    Q+G+P 
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F +M      P   T  I+L+GLCK++    AL +F  ++K      +V Y+I++
Sbjct: 409 AAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIIL 468

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+C AG+L TA                                   LE+ S +  KG  
Sbjct: 469 DGMCSAGKLNTA-----------------------------------LELFSCLPAKGLQ 493

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + + Y  +I  F K G L +A D +  M  +G   D  +YN  +     E ++  +   
Sbjct: 494 INVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKY 553

Query: 310 LDEMEKQGFECDKYTHTILIDGL 332
           L  M  +GF  D  T  ++I+ L
Sbjct: 554 LTMMRDKGFSVDATTTEMIINYL 576



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 168/354 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   + +A  + ++    G+ P++VTY  LI   C F  +    ++L+ M + G+ PD
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + + N L+    +   +  +  ++  M+ +G  PDV++YNSL+       + DEA RVF+
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFE 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P    +  +++G CK +  + A+ +   + K GF P++VT+  LI G C+ G
Sbjct: 346 LMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVG 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A+ +   +   G  PN  T   I+    +++     L +  AM++     +   Y 
Sbjct: 406 RPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYS 465

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G+L  A +    +   G+Q+++ +Y  +IN + K+G L+ A  LL  ME+ 
Sbjct: 466 IILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEEN 525

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           G   D  T+ + + GL     I  +  +L  M   GF  +      I++ L  +
Sbjct: 526 GCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTN 579



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 157/347 (45%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV Y+ ++D  C+         +   M   GI P++VTY  LI G         +  L
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM++MG+ PD+ S N L+  L + GK  +A  V   MI     P   T+N +++  C 
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A R+F  +   G +P++V Y  LI G CK   +  A  +L E+   G  P+ +T
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +TT++    +  +     E+   M + G   +      ++    K   L EA      M 
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              + L+IV Y+ +++  C  GKL  A  L   +  +G + + Y +TI+I+G  K G + 
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            A   L  M + G   +   YN  V  L  + +I  +I     M  K
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDK 560



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 102/215 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   + KA  ++ + I++G  PDVVT+  LI  +CQ     A   +   M + G  P+
Sbjct: 366 WCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + T   ++ G  ++ LLS +L L   M +  +  ++  Y+ ++  +   GK + A  +F 
Sbjct: 426 LQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS 485

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +    L      + IM+NG  K    D A  +   ++++G +P+  TYN+ ++GL    
Sbjct: 486 CLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAER 545

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            +  +   L  + D G + +A T   I+     N+
Sbjct: 546 EIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQ 580


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 214/429 (49%), Gaps = 7/429 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +LN  +  F K N LE A  +++DG     +  VVTYN+++   C+    +    + ++M
Sbjct: 399 ILNFLLKGFRKQNLLENA-YLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKM 457

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              GI+P +V+YN +I G  +   +  + ++++ ++E G+ P+  +Y  LM   F+ G  
Sbjct: 458 IGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDC 517

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  +F  M+   + P   TFN ++NGLCK      A        K  F+P  +TYN +
Sbjct: 518 EHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCI 577

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K G + +A  + +E+  S  +PN ITYT+++    ++ K  L L++   MKRKG 
Sbjct: 578 IDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGL 637

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T+IA F K+  ++ A  +  +++  G+  + + YN +I+ Y     +EAA  
Sbjct: 638 ELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALN 697

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L  EM      CD   +T LIDGL K G +  A  L+ E + + G   ++  YN +++ L
Sbjct: 698 LHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCR-GIVPDIFMYNVLINGL 756

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              G++++A  + + M+          Y++++    K   L  A +L    L  G+    
Sbjct: 757 CNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDD 816

Query: 424 SAQKAVVDG 432
           +    +V+G
Sbjct: 817 TTYDILVNG 825



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 195/398 (48%), Gaps = 4/398 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G  S    NI +   C+  ++ +A  +    I  G+ P +V+YN +I  +C+    D  +
Sbjct: 427 GIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAH 486

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            ++N + E+G+ P+ +TY  L+ G+ +      + ++ D+M+  GI P  +++NS+++ L
Sbjct: 487 EVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGL 546

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            ++G+  EA       I     P + T+N +++G  K    D+A  ++R + +    P +
Sbjct: 547 CKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNV 606

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           +TY  LI G CK+ ++  A  +  ++   G   +   Y T++    + +  +   +  S 
Sbjct: 607 ITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSK 666

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   G T +   Y  +I+A+  +  ++ A +  ++M+ + +  D+  Y +LI+   KEGK
Sbjct: 667 LLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGK 726

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L  A  L  EM  +G   D + + +LI+GLC  G ++ A   L+ M+       +  YN 
Sbjct: 727 LSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNT 786

Query: 363 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
           ++    K+G +  A  + + M     V D  TY  +V+
Sbjct: 787 LIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/518 (23%), Positives = 216/518 (41%), Gaps = 112/518 (21%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     +I +   C+ + L+ A  ++     LG +P   TY  +I A  +  +F     
Sbjct: 254 KLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALR 313

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M ++ +  +V    SLI G      ++ +L L DE++E+G+ P+V  ++ L+    
Sbjct: 314 LKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCS 373

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH------- 176
           ++G  ++AN ++  M C  L P     N +L G  K    +NA  +  G  ++       
Sbjct: 374 KIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVT 433

Query: 177 ---------------------------GFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
                                      G  P LV+YN +I G CK G +  A  ++  + 
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           +SG  PNAITYT +M+  F+    +    +   M   G     + + ++I    K+GR+ 
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVS 553

Query: 270 EATDYMEQM--------------VTDG---------------------VQLDIVSYNTLI 294
           EA D +                 + DG                     +  ++++Y +LI
Sbjct: 554 EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLI 613

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA------------- 341
           N +CK  K++ A  + D+M+++G E D   +  LI G CK  +++ A             
Sbjct: 614 NGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLT 673

Query: 342 -----------------------RLHLEYM-NKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
                                   LH E + NKI  D  L+ Y  ++D L K+GK+  A+
Sbjct: 674 PNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCD--LKIYTSLIDGLLKEGKLSFAL 731

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +++  M     V D F Y+ +++ LC   +L +A K+L
Sbjct: 732 DLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKIL 769



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 193/459 (42%), Gaps = 46/459 (10%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           L D   +N L+ +Y +             M E G+ P V   N L+    R +++  +  
Sbjct: 149 LSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHR 208

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L DEM E  I  D ++   LM    + GK  EA R F       L    A+++I++  +C
Sbjct: 209 LFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC 268

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTY------------------------------NI- 187
           +    D A ++  G ++ G+VP   TY                              N+ 
Sbjct: 269 RGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVA 328

Query: 188 ----LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
               LIKG C  G + +A  +  E+ + G  PN   ++ +++ C +    +   E+ + M
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM 388

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  G     F    ++  F K   L+ A   ++  V +G+   +V+YN ++   C+ GK+
Sbjct: 389 KCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKV 447

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAY 360
             A  L D+M  +G      ++  +I G CK G +  A    E MN I   G   N   Y
Sbjct: 448 NEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAH---EVMNGIIESGLKPNAITY 504

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             +++   K G  +HA N+F+ M     V   +T++S+++ LCK  R+  A   L + +K
Sbjct: 505 TILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIK 564

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                       ++DG    G    A+ +  ++  ++IS
Sbjct: 565 QSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEIS 603



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/441 (22%), Positives = 183/441 (41%), Gaps = 40/441 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            +N+ +    + N +E A  +  +     +  D  T  +L+ A  +   F        + 
Sbjct: 189 FVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQA 248

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+  D  +Y+ +I    R S L  +  L++   E+G  P   +Y +++    +LG  
Sbjct: 249 AGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNF 308

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA R+  +M+   +    A    ++ G C     ++ALR+F  + + G  P +  +++L
Sbjct: 309 GEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVL 368

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+   K G +  A  +   +   G  P       ++K   +    +    +L      G 
Sbjct: 369 IEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI 428

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL----- 303
                 Y  V+    ++G++ EA +  ++M+  G+   +VSYN +I  +CK+G +     
Sbjct: 429 A-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHE 487

Query: 304 ------------------------------EAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
                                         E A+ + D+M   G     YT   +I+GLC
Sbjct: 488 VMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLC 547

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-F 389
           K G +  AR  L    K  F      YNCI+D   K+G ID A +V+  M   E+  +  
Sbjct: 548 KVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVI 607

Query: 390 TYSSMVHNLCKAKRLPSASKL 410
           TY+S+++  CK+ ++  A K+
Sbjct: 608 TYTSLINGFCKSNKMDLALKM 628


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 203/468 (43%), Gaps = 77/468 (16%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             + +   C+  RL++A +++   +R G  PD VTYN+ ID  C+    D  + +L +M 
Sbjct: 44  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG---------------------- 107
           E    P  VTY +L+ G  +   L  ++ +L++M+E G                      
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 163

Query: 108 -------------IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------------- 139
                          PD + Y +L+  L ++GK DEA      M+               
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIH 223

Query: 140 ---------CGDLTPCTA--------------TFNIMLNGLCKNRYTDNALRMFRGLQKH 176
                     G+L    A              TFN ++  LCK   T+ A+   + + + 
Sbjct: 224 NLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER 283

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
              P L TY  L+ G  K GRL  A   LKE  + G  P+A+TYT+I+    +  + + G
Sbjct: 284 RCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 343

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            E    M+ +GY  D   Y  +I  F+K   + +A     QM+  G  +  V+YN +++ 
Sbjct: 344 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 403

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK G++  AY     ME++G      T++ L+DG C  GN+  A      M   G + N
Sbjct: 404 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 463

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L +YN I+  L + GK+  A   FE +  +    D +T++S +H LC+
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ 511



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 217/450 (48%), Gaps = 25/450 (5%)

Query: 5   LSTRLLNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +  +L++  VCT      CK  +L++A  +++D   +   PD+V + ++I+  C+    D
Sbjct: 2   IDRKLVDTRVCTALLNGLCKTGQLDRA-MLLLD--EMPCSPDMVAFTVVINGLCREKRLD 58

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
             +++L R   AG  PD VTYN  I G  +   +  +  LL +M E    P   +Y +L+
Sbjct: 59  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALV 118

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
             L + G+ DEA  + + M+    +P   T+ ++++GL K    + A R+F  +  +G  
Sbjct: 119 DGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR 178

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA----PNAITYTTIMK--CCFRNRKY 233
           P+   Y  LI GL K G+L  A   L ++ ++G A    P+ + +  +++  C   N + 
Sbjct: 179 PDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLED 238

Query: 234 KLGL--EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
            L    E+  ++    +TF+      ++AA  K  R +EA  ++++M        + +Y 
Sbjct: 239 ALAYFDELDDSLDLTHFTFN-----PLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYT 293

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           +L++ + K G+L+ A L L E  ++GF  D  T+T +IDGLCK G ++        M   
Sbjct: 294 SLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 353

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
           G++ +   Y  ++D   K   I  A  V+  M     V  + TY+ ++  LCKA R+  A
Sbjct: 354 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
               L+  + G         A++DG    G
Sbjct: 414 YATFLAMEERGCVATVVTYSALMDGFCSEG 443



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 189/410 (46%), Gaps = 47/410 (11%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D     +L+ G  +   L  ++ LLDEM      PD+ ++  +++ L +  + DEA  V 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           +  +     P   T+N+ ++GLCK    D+A ++ + + +   +P  VTY  L+ GL KA
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GRL  A  IL+++ + G++P   TYT ++    +  + +    I   M   G   D F Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDG----VQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
             +I+   KIG+L EA  Y+ QMV +G    V+ D+V +N +I   C  G LE A    D
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 312 EM-----------------------------------EKQGFECDKYTHTILIDGLCKAG 336
           E+                                   E++ F    +T+T L+DG  K G
Sbjct: 245 ELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPT-LFTYTSLVDGFLKLG 303

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A L L+   + GF  +   Y  I+D L K G+++     F  M  +    D+ TY+
Sbjct: 304 RLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 363

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           +++    KAK +P A ++    L+SG  +       ++DGL  +G   EA
Sbjct: 364 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 164/328 (50%), Gaps = 2/328 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  RL++A   + + +  G +PD VTY  +ID  C+    + G    + MR  G  PD
Sbjct: 299 FLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD 358

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY +LI G  +  ++  +  +  +ML+ G      +YN ++  L + G+  EA   F 
Sbjct: 359 AVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFL 418

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M          T++ +++G C       A+ +FR +   G  P LV+YNI+I+GLC+AG
Sbjct: 419 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAG 478

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           +L  A +  ++L      P+  T+ + +   C R      G+E+  +M  +G + +   Y
Sbjct: 479 KLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSY 538

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++    + G L+   +   +MV+ GV  D+V +NTLI   C  G+++ A  +  E+E+
Sbjct: 539 SILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER 598

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARL 343
           +    D +++  L+D L +   ++ ARL
Sbjct: 599 RSAP-DAWSYWSLLDALSRCERMEEARL 625



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 191/404 (47%), Gaps = 5/404 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C +  LE A A   D +   +     T+N L+ A C+    +     + +M E
Sbjct: 224 NLVIRQLCASGNLEDALAYF-DELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSE 282

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P + TY SL+ G  +   L  +L  L E +E G  PD  +Y S++  L +LG+ +E
Sbjct: 283 RRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEE 342

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               F +M      P   T+  +++G  K +    A R++R + + G V   VTYNI++ 
Sbjct: 343 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 402

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAGR+  A      + + G     +TY+ +M            +E+   M  +G   
Sbjct: 403 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 462

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE-GKLEAAYLL 309
           +   Y  +I    + G+L +A  Y E+++   +  D+ ++N+ ++  C+    +     L
Sbjct: 463 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVEL 522

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + M  QG   + ++++IL+DG+C+AG ++        M   G   ++  +N ++  L  
Sbjct: 523 FESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCI 582

Query: 370 DGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKL 410
            G++D A+ VF  +E     D+++Y S++  L + +R+  A  L
Sbjct: 583 AGRVDEALEVFRELERRSAPDAWSYWSLLDALSRCERMEEARLL 626



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 130/244 (53%), Gaps = 2/244 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +ST   NI +   CKA R+ +A A  +     G +  VVTY+ L+D +C   +  A   +
Sbjct: 392 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 451

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             RM + G  P++V+YN +I G  R   L+ +    +++L+  + PDV+++NS +H L Q
Sbjct: 452 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ 511

Query: 125 -LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            L    +   +F+ M+    +P   +++I+++G+C+    +  L +F  +   G  P++V
Sbjct: 512 RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVV 571

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            +N LI+ LC AGR+  A  + +EL +   AP+A +Y +++    R  + +    +   M
Sbjct: 572 VFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDALSRCERMEEARLLSFHM 630

Query: 244 KRKG 247
           K +G
Sbjct: 631 KLQG 634



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 7/159 (4%)

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
             L+N  CK G+L+ A LLLDEM       D    T++I+GLC+   +  A   LE   +
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCSP---DMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPS 406
            G + +   YN  +D L K  ++D A  + + M+ K     + TY+++V  L KA RL  
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           A  +L   ++ G          V+DGL  +G   EA++I
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 198/429 (46%), Gaps = 51/429 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C  NRL +  A     +R G  P++VTYN LI   C          +  RM+
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML------EMGIPPDVWSYNSLMHCLF 123
           + G +PDVVTY +LI G      ++ +L L  EML      E+   P+V +YN ++  L 
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226

Query: 124 QLGKPDEANRVFQ----------DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           ++G+ DEA ++F+          +M+   L P   TFN++++ LCK      A ++   +
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 286

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWIL---------------------------- 205
            + G VP+LVTYN LI+G C  G L +AR +                             
Sbjct: 287 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 346

Query: 206 -------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
                   E+   G  PN ITY +++K  F   K     ++ S MK  G   + + Y   
Sbjct: 347 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    K   L EA     ++ +   +L+I + N LI+  CK GKLE A+ L +++  +G 
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 466

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E +  T+TI+I G C+ G +  A + ++ M   G   ++  YN ++    +  K++  + 
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ 526

Query: 379 VFESMEVKD 387
           +   M  KD
Sbjct: 527 LLHRMAQKD 535



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 167/325 (51%), Gaps = 35/325 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ + T CK  ++ +A+ ++   I  G++PD+VTYN LI+ +C     ++   +   M 
Sbjct: 263 FNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMP 322

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV++YN LI G ++   +  ++ L +EML +G  P+V +Y+SL+  +F  GK D
Sbjct: 323 SKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD 382

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++F  M    +   + T+ I L+GLCKN     A+++F  L+   F  E+   N LI
Sbjct: 383 DAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLI 442

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCKAG+L TA  + ++L + GH PN +TYT +                          
Sbjct: 443 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM-------------------------- 476

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                    I  F + G++ +A   +++M  +G   DI++YNTL+  + +  KLE    L
Sbjct: 477 ---------IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 527

Query: 310 LDEMEKQGFECDKYTHTILIDGLCK 334
           L  M ++    D  T +I++D L K
Sbjct: 528 LHRMAQKDVSPDAITCSIVVDMLSK 552



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 198/396 (50%), Gaps = 22/396 (5%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D  T N+L++  C       G+     +   G SP++VTYN+LI G      +S +
Sbjct: 99  GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-------PCTAT 149
             L   M ++G  PDV +Y +L+  L   G  + A ++ Q+M+  D++       P   T
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML-NDISRYEINCKPNVIT 217

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFV----------PELVTYNILIKGLCKAGRLR 199
           +NI+++GLCK    D A ++F  ++  G +          P++VT+N+LI  LCK G++ 
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVI 277

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A+ +L  + +SG  P+ +TY ++++            E+  +M  KG   D   Y  +I
Sbjct: 278 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
             + K  +++EA     +M+  G + ++++Y++L+      GK++ A  L   M+  G  
Sbjct: 338 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 397

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            + YT+ I +DGLCK   +  A      +    F   +E  NC++D L K GK++ A  +
Sbjct: 398 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 457

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           FE +  +    +  TY+ M+H  C+  ++  A+ L+
Sbjct: 458 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 493



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 185/404 (45%), Gaps = 24/404 (5%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M  +  +P + ++N L++G  +    S    L ++M   G+  D  + N L++CL  + +
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E    F  ++    +P   T+N ++ GLC       A R+F  +QK G  P++VTY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 188 LIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIM------------KCCFR 229
           LIKGLC  G +  A  + +E L D         PN ITY  I+            K  F 
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
             K + G+ I + M  +G   D   +  +I    K G++ EA   +  M+  G+  D+V+
Sbjct: 240 EMKTQ-GM-IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 297

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           YN+LI  +C  G L +A  L   M  +G E D  ++ +LI+G  K   ++ A      M 
Sbjct: 298 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 357

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
            +G   N+  Y+ ++  +   GK+D A  +F  M+     ++S+TY   +  LCK   L 
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            A KL      S  ++       ++DGL  +G    A ++  K+
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 461



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 20/383 (5%)

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           T N   + +L     M+     P + S+N L+  L ++    +   ++  M    L+   
Sbjct: 45  TGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T NI+LN LC           F G+ + G+ P +VTYN LIKGLC   R+  A  +   
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164

Query: 208 LGDSGHAPNAITYTTIMK-CCFR---NRKYKLGLEILSAMKRKGYT--FDGFGYCTVIAA 261
           +   G  P+ +TY T++K  C     N   KL  E+L+ + R       +   Y  ++  
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224

Query: 262 FVKIGRLKEATDYMEQMVT----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
             K+GR  EA    E+M T           G+Q D+V++N LI+  CKEGK+  A  LL 
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG 284

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M + G   D  T+  LI+G C  G++  AR     M   G + ++ +YN +++   K  
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344

Query: 372 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K++ A+ ++  M    +  +  TY S++  +  A ++  A KL       G+        
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404

Query: 428 AVVDGLRHSGCRREAKKIQSKIR 450
             +DGL  + C  EA K+ ++++
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELK 427



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL    LN  +   CKA +LE A  +       G  P+VVTY ++I  +C+    D    
Sbjct: 432 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 491

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           ++ +M   G +PD++TYN+L+ G   ++ L   + LL  M +  + PD  +
Sbjct: 492 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 542


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 48/474 (10%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           FC  NR E+A  ++    DG      P++V+YN +I+ +      D  Y +   M + GI
Sbjct: 176 FCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGI 235

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY  +I G  +  ++  +  +  +M++ G+ P++ +Y  L+H    +G+  E  R
Sbjct: 236 PPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVR 295

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M    L P   T+ ++L+ LCK      A ++F  + + G  P++  Y I++ G  
Sbjct: 296 MLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYA 355

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFD 251
             G L      L  +  +G +PN   +  +  C F  +K  +G  ++I + M+++G + +
Sbjct: 356 TKGALSEMHSFLDLMVGNGISPNHYIFNIVF-CAFA-KKAMIGEAMDIFNKMRQQGLSPN 413

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI----------------- 294
              Y T+I A  K+GR+ +A     QM+ +GV  +IV + +L+                 
Sbjct: 414 VVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFF 473

Query: 295 -------------------NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                              NL C EG++  A  L+D ME+ G   D  ++  LI G C  
Sbjct: 474 EMVNQGIHPNVVFFNTIMCNL-CTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLV 532

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
           G    A   L+ M  +G   N   YN ++    +DG+ID A +VF+ M          TY
Sbjct: 533 GKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTY 592

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++++H L K +R   A +L L+ + SG +        +++GL  + C  EA K+
Sbjct: 593 NTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKM 646



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 203/452 (44%), Gaps = 44/452 (9%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGY----------------------------------- 62
           V PDV TY++L+  +C+    + G+                                   
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 63  --TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI---PPDVWSYNS 117
              +L RM E G +P+VV+YN+L+ G    +    +L+LL  M +  +   PP++ SYN+
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           +++  F  G+ D+A  +F DM    + P   T+ I+++GLCK +  D A  +F+ +   G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P +VTY  LI G    G+ +    +LKE+   G  P+  TY  ++    +  K     
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++  +M RKG   D   Y  ++  +   G L E   +++ MV +G+  +   +N +   +
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
            K+  +  A  + ++M +QG   +   +  LID LCK G +  A L    M   G   N+
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLS 413
             +  +V  L    K + A  +F  M  +    +   +++++ NLC   R+  A +L+  
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             + G R    +  A++ G    G   EA K+
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKL 541



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 187/411 (45%), Gaps = 8/411 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI  C F K   + +A  I     + G+ P+VV Y  LIDA C+    D      N+M
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++P++V + SL+ G         + +L  EM+  GI P+V  +N++M  L   G+ 
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRV 500

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A R+   M      P   ++N ++ G C    TD A ++   +   G  P   TYN L
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTL 560

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G C+ GR+  A  + +E+  +G  P  +TY TI+   F+ R++    E+   M   G 
Sbjct: 561 LHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            +  + Y  ++    K   + EA    + + +  +Q+DI+++N +I    K+G+ E A  
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D  T+ ++ + L + G+++        M K G   N    N +V RL 
Sbjct: 681 LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740

Query: 369 KDGKIDHAINVFESMEVKD---SFTYSSMVHNLC-----KAKRLPSASKLL 411
             G I  A      ++ K+     + +SM+ +L      +AK LP     L
Sbjct: 741 LRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFL 791



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 161/348 (46%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+   +N++  A+ +         I N+MR+ G+SP+VV Y +LI    +   +  +
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
               ++M+  G+ P++  + SL++ L  + K ++A  +F +M+   + P    FN ++  
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC       A R+   +++ G  P++++YN LI+G C  G+   A  +L  +   G  PN
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY T++    R+ +      +   M   G T     Y T++    K  R  EA +   
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+T G Q  I +YN ++N   K   ++ A  +   +  +  + D  T  I+I  L K G
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDG 673

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
             + A      ++  G   ++  Y  I + L ++G ++    +F  ME
Sbjct: 674 RKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 208/448 (46%), Gaps = 30/448 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   +  G  P+   +N L+ +YC    +   Y +LNRM   G  P 
Sbjct: 321 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 380

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            V YN  I        L  S DLLD       EML      +  +  +   CL  +GK D
Sbjct: 381 YVVYNIFIGSICGQEKLP-SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 439

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++ ++M+     P T+T++ ++  LC     + A  +F+ ++  G  P++ TY ILI
Sbjct: 440 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 499

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
              CKAG +  A+W+ +E+   G +P  +TYT ++    + ++     +I   M   G  
Sbjct: 500 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 559

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLD--------------IVSYNTL 293
            +   Y  ++    K G + +A +   +++  +D    D              +V+Y  L
Sbjct: 560 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 619

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++  CK  K++ A+ LLD M   G E +   +  LIDG CKAG I  A+     M K G+
Sbjct: 620 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 679

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSAS 408
             ++  Y  ++DR+ KDG++D A+ V   M +KDS      TY++M+  LC+      A 
Sbjct: 680 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTAMIDGLCRIGESEKAL 738

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           KLL    + G         A++DGL  S
Sbjct: 739 KLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 183/415 (44%), Gaps = 15/415 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+L+   C+   ++     L R+++ G  P  VTYN+L+   +    +     +  EM E
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE 237

Query: 106 MGIPPDVWSYNSLMHCLFQLGK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
            G   D ++     H L + G+  D  + + ++    D   CT     M++GL +  Y D
Sbjct: 238 SGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTH----MISGLMEASYFD 293

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+     ++ +  +P +VTY  L+ G  K  +L   + I+  +   G  PN   + +++
Sbjct: 294 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 353

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE------ATDYMEQM 278
                 + Y    ++L+ M   G       Y   I +     +L        A     +M
Sbjct: 354 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 413

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +     L+ V+        C  GK + A+ L+ EM ++GF  D  T++ +I  LC A  +
Sbjct: 414 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 473

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           + A L  + M  +G   ++  Y  ++D   K G I+ A  +FE M          TY+++
Sbjct: 474 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 533

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +H   KAK++P A+ +    + +G R       A+VDGL  +G   +A ++ +K+
Sbjct: 534 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 186/496 (37%), Gaps = 58/496 (11%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           RLLN+ V   C+     +A   +      G  P  VTYN L+         D G+ +   
Sbjct: 175 RLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKE 234

Query: 68  MREAG--------------------------------ISPDVVTYNSLIAGATRNSLLSC 95
           M E+G                                   D V    +I+G    S    
Sbjct: 235 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDE 294

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++  L  M      P+V +Y +L+    +  +     R+   M+     P  + FN +++
Sbjct: 295 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 354

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT------ARWILKELG 209
             C  +    A ++   +   G  P  V YNI I  +C   +L +      A  I  E+ 
Sbjct: 355 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 414

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            +    N +      +C     K+    +++  M RKG+  D   Y  VI       +++
Sbjct: 415 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 474

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A    ++M   GV  D+ +Y  LI+ +CK G +E A  L +EM   G      T+T LI
Sbjct: 475 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 534

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 385
               KA  +  A      M   G   N   Y  +VD L K G I  A  V+  +    + 
Sbjct: 535 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 594

Query: 386 KDS----------------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
            DS                 TY ++V  LCKA ++  A +LL + L SG         A+
Sbjct: 595 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 654

Query: 430 VDGLRHSGCRREAKKI 445
           +DG   +G    A+++
Sbjct: 655 IDGFCKAGKIDSAQEV 670



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 25/288 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I + +FCKA  +E+A+ +  +   +G  P VVTY  LI AY +         I +RM +
Sbjct: 496 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 555

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  P+ VTY +L+ G  +   +S + ++  ++                     +G  D 
Sbjct: 556 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL---------------------IGTSDS 594

Query: 131 ANRVFQDMICGD---LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
           A+  F    C D   L P   T+  +++GLCK    D+A  +   +   G  P  + Y+ 
Sbjct: 595 ADSDFY-FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDA 653

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CKAG++ +A+ +  ++   G+ P+  TYT+++   F++ +  L +++LS M +  
Sbjct: 654 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 713

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            T +   Y  +I    +IG  ++A   +  M   G   ++V+Y  LI+
Sbjct: 714 CTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 761



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/412 (20%), Positives = 162/412 (39%), Gaps = 48/412 (11%)

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           + GA R++   C+   L    ++G       Y++L   L   G+  +A R+ +++   D 
Sbjct: 111 VLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDR 170

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
                  N+++   C+    + AL     L+  G+ P  VTYN L++ L  AG++     
Sbjct: 171 EVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFR 230

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE----------------ILSAMKRKG 247
           + KE+ +SG   +  T         +  ++   L+                ++S +    
Sbjct: 231 VQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEAS 290

Query: 248 YTFDGFG----------------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
           Y  +                   Y T+++ F+K  +L      +  M+T+G   +   +N
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 350

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           +L++ YC E     AY LL+ M   G       + I I  +C    +    L L+   KI
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDL-LDLAEKI 409

Query: 352 GFDSNLEAYNCIVDRLGKD---------GKIDHAINVFESME----VKDSFTYSSMVHNL 398
                + A NC+++++            GK D A  + + M     V D+ TYS ++  L
Sbjct: 410 Y--GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 467

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           C A ++  A  L       GV         ++D    +G   +A+ +  ++R
Sbjct: 468 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 519


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 201/394 (51%), Gaps = 6/394 (1%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           ANRLE+A     +    GV PD+ +Y++L+ A          + + + M     SPD++T
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMT 210

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN L+ G  +      +  L+ E+L+ G  P+V++Y+ +++C  +L K +EA  VF  MI
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA-GRL 198
             +  P   TFN ++ G CK    ++A+++F  ++K G    +VTYN LI  LCK  G +
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
            TA  +  +L  +G  P  +TY ++++     R+    ++    M+ K    +   Y  +
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP-NVITYSIL 389

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K+ R+KEA   +E M   G    +V+Y  LIN +CK G+L++A L  ++M+  G 
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC 449

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +      LIDGLCKA         L +M+  G   ++  YNC++  L    +++ A  
Sbjct: 450 APNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 509

Query: 379 VFESME-VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +F+ M    +  T++ ++  LC  K++  A  +L
Sbjct: 510 LFDGMACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 198/422 (46%), Gaps = 13/422 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+  TYN+LI  +C+        ++ + M+ +G+ P+  T N+L+ G      +S +L L
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM      P   S+N L+   F  G+  +A    QDM     +  T T+N++L GLC 
Sbjct: 90  FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149

Query: 160 NRYTDN----ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              + N    A+  F+ ++  G  P+L +Y+IL+  L  +GR+  A  +   +  S   P
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---P 206

Query: 216 NAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           + +TY  +M   C   + Y+    ++  + + GY  + F Y  +I  + K+ +++EA + 
Sbjct: 207 DIMTYNVLMDGYCKIGQTYE-AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M+      + V++NTLI  +CK G LE A  L  EMEK G +    T+  LID LCK
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 335 A-GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFT 390
             G +  A      +   G    +  YN ++       ++  A+  F+ ME K   +  T
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVIT 385

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           YS ++  LCK +R+  A+K L      G          +++G    G  + A     K++
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMK 445

Query: 451 MA 452
           +A
Sbjct: 446 LA 447



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 48/445 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK  ++ +A ++  D    G+LP+  T N L+   C+     +   +   M+ 
Sbjct: 36  NVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQA 95

Query: 71  AGISPDVVTYNSLI-----AGATRNSL--------------------------------- 92
               P   ++N L+     AG  R++L                                 
Sbjct: 96  GPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSAN 155

Query: 93  -LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  +++   EM   G+ PD+ SY+ L+  L   G+  EA+ +F  M C   +P   T+N
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYN 212

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           ++++G CK   T  A  + + + K G+ P + TY+I+I   CK  ++  A  +  ++ +S
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI-GRLKE 270
              PNA+T+ T++    +    +  +++ + M++ G       Y T+I +  K  G +  
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A D   ++   G+   IV+YN+LI  +C   +L  A    DEME +    +  T++ILID
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP-NVITYSILID 391

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----K 386
           GLCK   +K A   LE M   G+   +  Y  +++   K G++  A+  FE M++     
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP 451

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++  +++++  LCKA+R     +LL
Sbjct: 452 NTVIFNTLIDGLCKAERANDGLRLL 476



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 176/372 (47%), Gaps = 40/372 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  +CK  +  +A++++ + ++ G  P+V TY+++I+ YC+    +  + +  +M E
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF-QLGKPD 129
           +   P+ VT+N+LIAG  +  +L  ++ L  EM ++G    + +YN+L+  L  + G   
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F  +    LTP   T+N ++ G C  R    A++ F  ++     P ++TY+ILI
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILI 390

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  R++ A   L+++   G+ P  +TY  +                          
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGL-------------------------- 424

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                    I  F K G LK A  + E+M   G   + V +NTLI+  CK  +      L
Sbjct: 425 ---------INGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRL 475

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L  M  +G + D  T+  LI GLC A  ++ A+      + +    N+  +N ++  L  
Sbjct: 476 LCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ---RLFDGMACAPNVTTFNFLIRGLCA 532

Query: 370 DGKIDHAINVFE 381
             K++ A N+ +
Sbjct: 533 QKKVEEARNILD 544



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 176/371 (47%), Gaps = 12/371 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N L+         D    +   +     +P+  TYN LI G  +   +  ++ +  +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G+ P+  + N+L+  L ++G+   A ++F++M  G   P +A+ NI+L G        +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLC----KAGRLRTARWILKELGDSGHAPNAITYT 221
           AL   + ++K        TYN+++KGLC     A RL  A    KE+  SG  P+  +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++     + +      + SAM     + D   Y  ++  + KIG+  EA   M++++  
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + ++ +Y+ +IN YCK  K+E A+ +  +M +     +  T   LI G CKAG ++ A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRL-GKDGKIDHAINVFESME----VKDSFTYSSMVH 396
                 M KIG  + +  YN ++D L  K G +  A+++F  +E         TY+S++ 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 397 NLCKAKRLPSA 407
             C A+RL  A
Sbjct: 358 GFCDARRLSEA 368



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 5/168 (2%)

Query: 1   MFGKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF 58
           M GK +  ++  +I +   CK  R+++A   + D    G  P VVTY  LI+ +C+    
Sbjct: 375 MEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGEL 434

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
            +      +M+ AG +P+ V +N+LI G  +    +  L LL  M   G  PDV +YN L
Sbjct: 435 KSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCL 494

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           +  L    + ++A R+F  M C    P   TFN ++ GLC  +  + A
Sbjct: 495 ISGLCSANRVEDAQRLFDGMACA---PNVTTFNFLIRGLCAQKKVEEA 539


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 213/442 (48%), Gaps = 7/442 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           N  + + C  +R ++A  ++    + G    PDVV++N +I  + +         ++N M
Sbjct: 231 NTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEM 290

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+ PDVVTYNS++    +   +  +  +L +M++ G+ PD  +Y +++H     G  
Sbjct: 291 VQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHW 350

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F+ M    L P   TFN  ++ LCK+  + +A  +F+ +   G +P+LV+Y+IL
Sbjct: 351 KESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSIL 410

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G    GR      +   + D G   N   +  ++    +       + + + M+ +G 
Sbjct: 411 LHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T+I+AF ++GRL +A +   QM++ G++ + V Y++LI+ +C  G L  A  
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530

Query: 309 LLDEMEKQGFECDKYT-HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L+ EM  +G         + +I  LC  G +  A      +  IG    +  +N ++D  
Sbjct: 531 LVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590

Query: 368 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              GK++ A  V ++M       D  TY+++V   CK+ ++     L    L   V+   
Sbjct: 591 CLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                V+DGL H+G    AKK+
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKM 672



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 11/438 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  F K   + KA  +I + ++ GV PDVVTYN ++DA C+  + D    +L +M 
Sbjct: 267 FNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMV 326

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD +TY ++I G + +     S  +  +M   G+ P + ++NS M  L + G+  
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +A  +FQ M      P   +++I+L+G   + R+ D    +F  +   G V     +NIL
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN-NLFHSMADKGIVANCHCFNIL 445

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I    K G +  A  +  E+   G  P+ +TY+T++    R  +    +E  S M   G 
Sbjct: 446 ISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAY 307
             +   Y ++I  F   G L +A + + +M++ G+ + +IV ++++I+  C EG++  A+
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAH 565

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            + + +   G      T   LIDG C  G ++ A   L+ M  +G + ++  YN +V   
Sbjct: 566 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGY 625

Query: 368 GKDGKIDHAINVFESM---EVKD-SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K GKID  + +F  M   +VK  + TYS ++  L  A R  +A K+    + SG  +  
Sbjct: 626 CKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDI 685

Query: 424 SAQKAVVDGLRHSGCRRE 441
              K ++ GL    CR +
Sbjct: 686 DTYKILLKGL----CRND 699



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 194/455 (42%), Gaps = 48/455 (10%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           NR+ + EA    G R+  L  V TY +L+D  C+    D G     R+  AG+    +  
Sbjct: 140 NRICREEA----GPRVAPL-SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEA 194

Query: 81  NSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           N+ +           ++D LL  M ++G  P+  SYN+++  L    +  EA  + Q M 
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254

Query: 140 --CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
              G  +P   +FN +++G  K      A  +   + + G  P++VTYN ++  LCKA  
Sbjct: 255 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARA 314

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +L+++ D G  P+ +TYT I+     +  +K   ++   M  KG       + +
Sbjct: 315 MDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNS 374

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY--------------------------- 290
            +++  K GR K+A +  + M T G   D+VSY                           
Sbjct: 375 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG 434

Query: 291 --------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
                   N LI+ + K G ++ A L+  EM+ QG   D  T++ LI   C+ G +  A 
Sbjct: 435 IVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAM 494

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHN 397
                M  IG + N   Y+ ++      G +  A  +   M  K     +   +SS++H+
Sbjct: 495 EKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHS 554

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           LC   R+  A  +    +  G R       +++DG
Sbjct: 555 LCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDG 589



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 1/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +    K   +++A  +  +    GV PDVVTY+ LI A+C+           ++M 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKP 128
             G+ P+ V Y+SLI G   +  L  + +L+ EM+  GIP P++  ++S++H L   G+ 
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A+ VF  +I     P   TFN +++G C     + A  +   +   G  P++VTYN L
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G CK+G++     + +E+      P  +TY+ ++   F   +     ++   M   G 
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  ++    +     EA     ++     + DI   NT+IN   K  + E A  
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   +  T+ ++I  L K G+++ A      M K G   +    N I+  L 
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801

Query: 369 KDGKI 373
           + G I
Sbjct: 802 QKGDI 806



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 179/427 (41%), Gaps = 43/427 (10%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTY-------- 45
           MF K++++ L   + TF       CK  R + AE I       G +PD+V+Y        
Sbjct: 356 MFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYA 415

Query: 46  ---------------------------NMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
                                      N+LI A+ +    D    +   M+  G+ PDVV
Sbjct: 416 TEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVV 475

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY++LI+   R   L+ +++   +M+ +G+ P+   Y+SL+H     G   +A  +  +M
Sbjct: 476 TYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535

Query: 139 IC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +  G   P    F+ +++ LC      +A  +F  +   G  P +VT+N LI G C  G+
Sbjct: 536 MSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 595

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +L  +   G  P+ +TY T++    ++ K   GL +   M  K        Y  
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           V+      GR   A     +M+  G  +DI +Y  L+   C+    + A  L  ++    
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + D      +I+ L K    + A      ++  G   N+  Y  ++  L K+G ++ A 
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775

Query: 378 NVFESME 384
            +F SME
Sbjct: 776 TMFSSME 782



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 136/287 (47%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C   R+  A  +    I +G  P +VT+N LID YC     +  + +L+ M   GI P
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 613

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+L++G  ++  +   L L  EML   + P   +Y+ ++  LF  G+   A ++F
Sbjct: 614 DVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMF 673

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI         T+ I+L GLC+N  TD A+ +F  L       ++   N +I  L K 
Sbjct: 674 HEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKV 733

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A  +   +  SG  PN  TY  ++    +    +    + S+M++ G        
Sbjct: 734 RRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
             +I   ++ G + +A  YM ++    + L+  + + L++L+  +GK
Sbjct: 794 NDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 40/345 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC    L KA+ ++ + +  G+  P++V ++ +I + C        + + N +   G  P
Sbjct: 519 FCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRP 578

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            +VT+NSLI G      +  +  +LD M+ +GI PDV +YN+L+    + GK D+   +F
Sbjct: 579 TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILF 638

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M+   + P T T++I+L+GL     T  A +MF  +   G   ++ TY IL+KGLC+ 
Sbjct: 639 REMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRN 698

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A  +  +LG              M C       K  + IL+              
Sbjct: 699 DLTDEAITLFHKLG-------------AMDC-------KFDITILN-------------- 724

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            TVI A  K+ R +EA D    + T G+  ++ +Y  +I+   KEG +E A  +   MEK
Sbjct: 725 -TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEK 783

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEA 359
            G          +I  L + G+I  A     YM+K+ G   +LEA
Sbjct: 784 SGCAPSSRLLNDIIRMLLQKGDIVKAGY---YMSKVDGTIISLEA 825



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 112/232 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +CK+ +++    +  + +   V P  VTY++++D         A   + + M +
Sbjct: 619 NTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMID 678

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G + D+ TY  L+ G  RN L   ++ L  ++  M    D+   N++++ L+++ + +E
Sbjct: 679 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREE 738

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +F  +    L P  +T+ +M++ L K    + A  MF  ++K G  P     N +I+
Sbjct: 739 ANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIR 798

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            L + G +  A + + ++  +  +  A T + +M       K++  ++ L A
Sbjct: 799 MLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFLPA 850


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  181 bits (459), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 202/425 (47%), Gaps = 22/425 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA +++    ++ +  R G+ P VVTYN+L+DA C+    +  + +  RM + G++P 
Sbjct: 21  LCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS 80

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+  LI G  R         +L EM ++G+ P+   YN L+    + G   +A R+F 
Sbjct: 81  VVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFD 140

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC-KA 195
           +M+   + P   T+N++   LCK    + A R+   +   G       +N ++  L  + 
Sbjct: 141 EMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRT 200

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY-----------------KLGLE 238
            RL +   I  E+   G  PN    T  M+   +  K+                 K   +
Sbjct: 201 RRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATK 260

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           ++  M  KG   D   Y  +I    K  +++EA      M   G + D+ ++NTL++ YC
Sbjct: 261 VIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC 320

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             GK+E  + LLD+M+ +G + D  ++  +IDG CKA +I+ A+ +L  +   G   N+ 
Sbjct: 321 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF 380

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++   G++G I  AI+  E+M+       + TY S+++ +C A  +  A  +    
Sbjct: 381 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQA 440

Query: 415 LKSGV 419
            ++ V
Sbjct: 441 RENNV 445



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 210/457 (45%), Gaps = 22/457 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK+ R+E+A  +     + G+ P VVT+ +LI+   +   F     +L  M +
Sbjct: 50  NVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQ 109

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+ V YN LI    R    S +L L DEM+   + P   +YN +   L + G+ + 
Sbjct: 110 LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMER 169

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A R+ +DM+   +T     FN ++  L  + R  ++ + +   +   G  P        +
Sbjct: 170 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 229

Query: 190 KGLCKAGR-----------------LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           + LCK G+                 ++ A  +++ + + G   ++ITY  +++ C ++ K
Sbjct: 230 RELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSK 289

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            +  +++   M R+G+  D F + T++ A+  +G+++E    ++QM T+G+Q DIVSY T
Sbjct: 290 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGT 349

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I+ +CK   +  A   L E+  +G + + + +  LI G  + G+I GA   +E M   G
Sbjct: 350 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 409

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSAS 408
                  Y  ++  +   G ++ A  +F      +       Y+ M+   CK  ++  A 
Sbjct: 410 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 469

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
                    G+   K     ++     SG   EA K+
Sbjct: 470 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKL 506



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 172/378 (45%), Gaps = 22/378 (5%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA-TRNSLLSCSLD 98
           P  VTYN++  A C+    +    IL  M   G++     +N+++A    R   L   + 
Sbjct: 149 PTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVS 208

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-----------------NRVFQDMICG 141
           + +EM+  G+ P+     + M  L + GK  EA                  +V Q M+  
Sbjct: 209 ITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNK 268

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
            +   + T+NIM+ G CK+   + A+++   + + GF P+L T+N L+   C  G++   
Sbjct: 269 GIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEET 328

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L ++   G  P+ ++Y TI+    + +  +   E L+ +  +G   + F Y  +I  
Sbjct: 329 FHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGG 388

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           + + G +  A D +E M ++G+Q   V+Y +L+   C  G +E A  +  +  +   +  
Sbjct: 389 YGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLG 448

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
              +TI+I G CK G +  A  + E M   G   N   Y  ++    K G  + A  +F+
Sbjct: 449 VIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFD 508

Query: 382 SM----EVKDSFTYSSMV 395
            M     + D+ TY +++
Sbjct: 509 EMVGSGVIPDNITYGTLI 526



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 156/379 (41%), Gaps = 18/379 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS-FDAGYTILNRMR 69
           N+     CK   +E+AE I+ D + +G+      +N ++    Q     ++  +I N M 
Sbjct: 155 NLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMV 214

Query: 70  EAGISPD----VVTYNSLIAGATRNSLLSCSLDLLDE-------------MLEMGIPPDV 112
             G+ P+          L  G      +      L++             ML  GI  D 
Sbjct: 215 TRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDS 274

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
            +YN ++    +  K +EA ++  DM      P   TFN +L+  C     +    +   
Sbjct: 275 ITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQ 334

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           ++  G  P++V+Y  +I G CKA  +R A+  L EL D G  PN   Y  ++    RN  
Sbjct: 335 MKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGD 394

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               ++ +  MK  G       Y +++      G ++EA     Q   + V L ++ Y  
Sbjct: 395 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 454

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I  YCK GK+  A    +EM  +G   +K T+T L+    K+GN + A    + M   G
Sbjct: 455 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 514

Query: 353 FDSNLEAYNCIVDRLGKDG 371
              +   Y  ++ R  + G
Sbjct: 515 VIPDNITYGTLIARCSEKG 533



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 142/304 (46%), Gaps = 35/304 (11%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L +   NI +   CK +++E+A  +  D  R G  PD+ T+N L+ AYC     +  + 
Sbjct: 271 ELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFH 330

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L++M+  G+ PD+V+Y ++I G  +   +  + + L E+++ G+ P+V+ YN+L+    
Sbjct: 331 LLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYG 390

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G    A    + M    + P   T+  ++  +C     + A  +F   +++     ++
Sbjct: 391 RNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVI 450

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y I+I+G CK G++  A    +E+   G +PN +TYTT+M                   
Sbjct: 451 GYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM------------------- 491

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                            A+ K G  +EA+   ++MV  GV  D ++Y TLI    ++G  
Sbjct: 492 ----------------YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGK 535

Query: 304 EAAY 307
              Y
Sbjct: 536 TTQY 539



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 159/359 (44%), Gaps = 22/359 (6%)

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           +SY +++  L + GK D    +  ++    L P   T+N++++ LCK+   + A R+   
Sbjct: 12  YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 71

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +++ G  P +VT+ ILI GL +  R      +L+E+   G +PN + Y  ++    R   
Sbjct: 72  MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 131

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L +   M  K        Y  +  A  K G ++ A   +E M++ G+ +    +NT
Sbjct: 132 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191

Query: 293 LIN-LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-------------- 337
           ++  L  +  +LE+   + +EM  +G   +    T  +  LCK G               
Sbjct: 192 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 251

Query: 338 ---IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
              +K A   ++ M   G + +   YN ++    KD K++ AI +   M  +    D FT
Sbjct: 252 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 311

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +++++H  C   ++     LL      G++    +   ++DG   +   R+AK+  +++
Sbjct: 312 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 370



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 76/170 (44%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           A N  +YT ++K   +  K   G E+L+ + R G       Y  ++ A  K GR++EA  
Sbjct: 8   ALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFR 67

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              +M   G+   +V++  LIN   +  +     ++L EME+ G   ++  +  LI   C
Sbjct: 68  LKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHC 127

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           + G+   A    + M           YN I   L K+G+++ A  + E M
Sbjct: 128 RKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDM 177



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 39/178 (21%)

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 341
           V L+  SY  +I   CK GK++A + +L E+ + G +    T+ +L+D LCK+G ++ A 
Sbjct: 7   VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 342 RLH----------------------------------LEYMNKIGFDSNLEAYNCIVDRL 367
           RL                                   L+ M ++G   N   YN ++   
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 368 GKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            + G    A+ +F+ M +K     + TY+ +   LCK   +  A ++L   L  G+ +
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 8/131 (6%)

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E +    ++Y++T +I  LCKAG +      L  + + G    +  YN ++D L K G++
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A  +   ME         T+  +++ L + +R      +L    + GV    S  + +
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGV----SPNEVI 118

Query: 430 VDGLRHSGCRR 440
            + L    CR+
Sbjct: 119 YNELIGWHCRK 129


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 204/394 (51%), Gaps = 4/394 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           ++N  +  F + N LE A  +  + +  G+  +VVTYN+L+    +    +    +  +M
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKM 455

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              GI+P +V+YN+LI G  +   +  +  +L  +LE G+ P+  +Y  L+   F+ G  
Sbjct: 456 VSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDS 515

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  VF+ M+  ++ P   TFN ++NGL K               K GFV   +TYN +
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI 575

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K G + +A    +E+ +SG +P+ ITYT+++    ++ K  L LE+ S MK KG 
Sbjct: 576 IDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGM 635

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  F K+  ++ A+ +  +++  G+  + V YN++I+ +     +EAA  
Sbjct: 636 KLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALN 695

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L  EM K    CD   +T +I GL K G +  A  L+ E ++K     ++  Y  +++ L
Sbjct: 696 LHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSK-DIVPDIVMYTVLINGL 754

Query: 368 GKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
             +G++++A  + + M+  ++ T S +V+N+  A
Sbjct: 755 SNNGQLENASKILKEMD-GNNITPSVLVYNILIA 787



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 173/356 (48%), Gaps = 2/356 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   ++KA +++   +  G+ P+ VTY +LID + +    +  + +  +M  
Sbjct: 468 NNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMA 527

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           A I+P   T+N++I G  +   +S + D L+  ++ G      +YNS++   F+ G  D 
Sbjct: 528 ANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDS 587

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   +++M    ++P   T+  +++GLCK+     AL M   ++  G   ++V Y+ LI 
Sbjct: 588 ALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALID 647

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK   + +A     EL D G  PN + Y +++         +  L +   M +     
Sbjct: 648 GFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPC 707

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I   +K G+L  A D   +M++  +  DIV Y  LIN     G+LE A  +L
Sbjct: 708 DLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKIL 767

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVD 365
            EM+          + ILI G  + GN++ A RLH E ++K G   +   Y+ +V+
Sbjct: 768 KEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDK-GLVPDDTTYDILVN 822



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 194/419 (46%), Gaps = 5/419 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  + E+ E    +    G+  D   Y++L+ A C+ +  +    +L  MRE G  P   
Sbjct: 232 KEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKG 291

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY ++I    +      +L L DEM+ +G+P +V    SLM     LG  + A ++F ++
Sbjct: 292 TYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEV 351

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           + G + P    F++++NG  K    + A  ++  ++  G  P +   N L++G  +   L
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E  + G   N +TY  ++K      K      +   M  KG T     Y  +
Sbjct: 412 EHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K G + +A   ++ ++  G++ + V+Y  LI+ + K+G  E A+++ ++M     
Sbjct: 471 ILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANI 530

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T   +I+GL K G +   +  L    K GF S    YN I+D   K+G +D A+ 
Sbjct: 531 APTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALL 590

Query: 379 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +    ES    D  TY+S++  LCK+ ++  A ++       G+++   A  A++DG 
Sbjct: 591 AYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGF 649



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 149/300 (49%), Gaps = 5/300 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +    K  R+ + +  + + I+ G +   +TYN +ID + +  + D+       M 
Sbjct: 537 FNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMC 596

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E+GISPDV+TY SLI G  +++ +  +L++  +M   G+  DV +Y++L+    ++   +
Sbjct: 597 ESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDME 656

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A++ F +++   LTP T  +N M++G       + AL + + + K+    +L  Y  +I
Sbjct: 657 SASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSII 716

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL K G+L  A  +  E+      P+ + YT ++     N + +   +IL  M     T
Sbjct: 717 GGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNIT 776

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  +IA   + G L+EA    ++M+  G+  D  +Y+ L+N     GKL+ ++ L
Sbjct: 777 PSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN-----GKLKVSHTL 831



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 38/387 (9%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G   D   +N L+    ++ K  +A   F+ M+  DL P     N +L  + +     +A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            +++  + + G   +  T +++++   K G+        KE    G   +A  Y+ +++ 
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             R     L  E+L  M+  G+      Y  VI A VK G   EA    ++MV+ G+ ++
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           ++   +L+  YC  G +  A  L DE+ + G   D    ++LI+G  K G+++ A     
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384

Query: 347 YMNKIG---------------------------FD-------SNLEAYNCIVDRLGKDGK 372
            M  +G                           FD       +N+  YN ++  LG+ GK
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGK 444

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           ++ A N++E M  K       +Y++++   CK   +  A  +L S L+ G++        
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 429 VVDGLRHSGCRREAKKIQSKIRMAKIS 455
           ++DG    G    A  +  ++  A I+
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIA 531


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 199/399 (49%), Gaps = 8/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R+ +A  ++   +  G +P V+TY  L+   C+    D    +L R+ E     +
Sbjct: 239 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----N 294

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV +N++I G      L+ + +L + M   G  PD  +Y+ LMH L +LG+   A R+ +
Sbjct: 295 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 354

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+ I+L+  CKN   D+   +   +   G       YN +I  LCK G
Sbjct: 355 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 414

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  +++E+   G  P+  +Y TI+     N + +    +   +  +G   +G  Y 
Sbjct: 415 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 474

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I A ++ GR ++A    ++M+  G  LD+VSYN LI   CK+G ++ + +LL+EM ++
Sbjct: 475 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  ++ ILI  LCK   ++ A    + M   G   ++  YN +++ L K G +  A
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 594

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +N+ E +  +    D  TY+ ++   CK + L  A+ LL
Sbjct: 595 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 198/431 (45%), Gaps = 35/431 (8%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P   T+ +   A C+    D    +L  M   G  PD V Y ++I        ++ + 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL+EML MG   DV +++ ++  +  LG+  EA R+   M+     P   T+  +L GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 158 CKNRYTDNALRM-------------------------------FRGLQKHGFVPELVTYN 186
           C+ R  D A  M                               +  +   G  P+  TY+
Sbjct: 275 CRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 334

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           IL+ GLCK GR+ +A  +L+E+   G APN +TYT ++    +N  +     +L  M  K
Sbjct: 335 ILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 394

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T +  GY  +I A  K GR+ EA   +++M + G   DI SYNT+I   C   ++E A
Sbjct: 395 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 454

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + + + ++G   +  T+  +I  L + G  + A    + M   G   ++ +YN ++  
Sbjct: 455 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 514

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           + KDG +D ++ + E M  K    ++ +Y+ ++  LCK +R+  A +L    L  G+   
Sbjct: 515 MCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 574

Query: 423 KSAQKAVVDGL 433
                 +++GL
Sbjct: 575 IVTYNTLINGL 585



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 164/301 (54%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  R+  A  ++ +  + G  P+VVTY +++ ++C+   +D    +L  M  
Sbjct: 334 SILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 393

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ +   YN +I    ++  +  ++ L+ EM   G  PD+ SYN++++ L    + +E
Sbjct: 394 KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEE 453

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++++   +     T+N +++ L ++    +A+R+ + +  HG   ++V+YN LIK
Sbjct: 454 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 513

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            +CK G +  +  +L+E+ + G  PN ++Y  ++    + R+ +  LE+   M  +G   
Sbjct: 514 AMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAP 573

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K+G +  A + +E++  + V  DI++YN LI+ +CK   L+ A +LL
Sbjct: 574 DIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633

Query: 311 D 311
           +
Sbjct: 634 N 634



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 114/220 (51%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+++  N  +   CK  R+++A  +I +    G  PD+ +YN +I   C     +    +
Sbjct: 398 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 457

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              + E G+  + +TYN++I    R+     ++ L  EM+  G   DV SYN L+  + +
Sbjct: 458 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 517

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D +  + ++M    + P   ++NI+++ LCK R   +AL + + +   G  P++VT
Sbjct: 518 DGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVT 577

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           YN LI GLCK G +  A  +L++L +    P+ ITY  ++
Sbjct: 578 YNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 36/268 (13%)

Query: 134 VFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           +++ M+  D + P T TF +    LC+    D AL + RG+ +HG VP+ V Y  +I  L
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C  G +  A  +L E+   G A +  T+  +++      + +    ++  M  KG     
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  ++    ++ +  EA      M+    +L++V +NT+I     EGKL  A  L + 
Sbjct: 265 MTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYET 320

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M  +G + D +T++IL+ GLCK G I  A   L  M K GF                   
Sbjct: 321 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF------------------- 361

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNLCK 400
              A NV          TY+ ++H+ CK
Sbjct: 362 ---APNVV---------TYTIVLHSFCK 377


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 200/416 (48%), Gaps = 6/416 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C   +L+KA  I+    R G +P +V+YN L+   C+   F     +++ M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME 237

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI  DV TYN  I    RNS  +    +L +M    I P+  SYN+L++   + GK  
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A RVF +MI  +L+P   T+NI++NG C N   + ALR+   ++ +   P  VT   L+
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL 357

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL K+ +   AR IL+    +  + N I++T ++    RN       ++L  M + G  
Sbjct: 358 NGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVH 417

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  +I  F K+G + +A + M ++  +G   + V ++TLI   CK G +  A   
Sbjct: 418 PDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKF 477

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M   G   D +T   L+  LC+ G +  A   L ++++IG   N   ++CI++    
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGV 419
            G    A +VF+ M         FTY S++  LCK +    A KLL  L C+   V
Sbjct: 538 VGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAV 593



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 183/382 (47%), Gaps = 10/382 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P V T NM++ +  +       ++   +M  + + P+V ++N LI+       L  +
Sbjct: 135 GFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKA 194

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +++L  M   G  P + SYN+L+    + G+   A  +   M C  +     T+N+ ++ 
Sbjct: 195 VNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDS 254

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+N  +     + + ++     P  V+YN LI G  K G++  A  +  E+ +   +PN
Sbjct: 255 LCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY  ++     N  ++  L +L  M+      +     T++    K  +   A + +E
Sbjct: 315 LITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILE 374

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +   +   L+ +S+  +I+  C+ G L+ A+ LL EM K G   D  T ++LI+G CK G
Sbjct: 375 RYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVG 434

Query: 337 NIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           NI  A+   E M+KI   GF  N   ++ ++    K G +  A+  + +M +     D+F
Sbjct: 435 NINKAK---EVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNF 491

Query: 390 TYSSMVHNLCKAKRLPSASKLL 411
           T +S+V +LC+  +L  A + L
Sbjct: 492 TCNSLVASLCENGKLVEAEEFL 513



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 167/351 (47%), Gaps = 8/351 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           S +   ++ LI    R  ++  +++    ML  G  P V++ N +M  + +  +      
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M+   + P  ++FNI+++ LC       A+ +   ++++G+VP +V+YN L+   C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR + A  ++  +   G   +  TY   +    RN +   G  +L  M+ K  T +  
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  FVK G++  AT    +M+   +  ++++YN LIN YC  G  E A  +LD M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY--MNKIGFDSNLEAYNCIVDRLGKDG 371
           E      ++ T   L++GL K+     AR  LE   +N+     N  ++  ++D L ++G
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL--NCISHTVMIDGLCRNG 399

Query: 372 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +D A  +   M       D  T+S +++  CK   +  A +++    + G
Sbjct: 400 LLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 184/400 (46%), Gaps = 5/400 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +++ ++ID  C+    D  + +L  M + G+ PD++T++ LI G  +   ++ + +++ +
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSK 445

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +   G  P+   +++L++   ++G   EA + +  M          T N ++  LC+N  
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A      + + G VP  VT++ +I G    G    A  +   +   GH P+  TY +
Sbjct: 506 LVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGS 565

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++K   + + +    ++L  +       D   Y T+I    K G L EA    E+M+ + 
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDE-MEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           +  D  +Y  +++   +EG+L  A++ L   M+K+    +   +T  IDGL KAG  K A
Sbjct: 626 ILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAA 685

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHN 397
               + M + G   +L A N I D   + GK+  A ++      K+      T++ ++H 
Sbjct: 686 LYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG 745

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             + + + S  KL     +SG    +    +++ GL + G
Sbjct: 746 YSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHG 785



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 184/423 (43%), Gaps = 7/423 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK   + KA+ ++    R G +P+ V ++ LI   C+  +          M   G + D
Sbjct: 430 FCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNAD 489

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T NSL+A    N  L  + + L  +  +G+ P+  +++ +++    +G    A  VF 
Sbjct: 490 NFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFD 549

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI     P   T+  +L  LCK +    A ++ + L       + ++YN LI  + K+G
Sbjct: 550 RMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSG 609

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-AMKRKGYTFDGFGY 255
            L  A  + +E+  +   P++ TYT I+    R  +       L   M+++  T +   Y
Sbjct: 610 NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVY 669

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
              I    K G+ K A    ++M   G+ LD+++ N++ + Y + GK+ +A  L+ +   
Sbjct: 670 TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T  IL+ G  +  +I         M + GF  N   Y+ ++  L   G ++ 
Sbjct: 730 KNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLEL 789

Query: 376 AINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            I +      ES  + D  T++ ++   C+   L     L  +     V + K  QKAV 
Sbjct: 790 GIKMLKMFIAESSTI-DDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 431 DGL 433
           D L
Sbjct: 849 DVL 851



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/475 (20%), Positives = 195/475 (41%), Gaps = 75/475 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V + C+  +L +AE  +    R+G++P+ VT++ +I+ Y         +++ +RM  
Sbjct: 494 NSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMIS 553

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P   TY SL+    +      +  LL ++  + +  D  SYN+L+  + + G   E
Sbjct: 554 CGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 131 ANRVFQDMICGDLTPCTATFNIML------------------------------------ 154
           A R+F++MI  ++ P + T+  +L                                    
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 155 NGLCKNRYTDNALRMFRGLQKHGF-----------------------------------V 179
           +GL K   +  AL +F+ +++ G                                    +
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P L T+NIL+ G  +   + +   +   +  SG  PN +TY +++     +   +LG+++
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L     +  T D   +  +I    +I  L +  D    M    V LD  +   + ++  +
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
               +  ++ + EM K+GF      +  ++  +C+ G+I+GA    + M  +G   +  A
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
              +V  L   GKI+ A+ + + M    ++  + T+++++H  CK      A  L
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 71/429 (16%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR-MR 69
            N  +    K+  L +A  +  + I+  +LPD  TY  ++    +       +  L R M+
Sbjct: 599  NTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQ 658

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +  ++ + + Y   I G  +      +L L  EM E G+  D+ + NS+     ++GK  
Sbjct: 659  KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVF 718

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
             A+ +       ++ P   TFNI+L+G  + +   +  +++  +++ GF P  +TY+ LI
Sbjct: 719  SASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLI 778

Query: 190  KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRN------------RKYKLG 236
             GLC  G L     +LK         + +T+  ++ KCC  N              +++ 
Sbjct: 779  LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 237  LE----------------------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            L+                       +  M +KG+      YCT++    ++G ++ A   
Sbjct: 839  LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 275  MEQMVTDGVQLD-----------------------------------IVSYNTLINLYCK 299
             +QMV  G+ LD                                     ++ TL++++CK
Sbjct: 899  KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 300  EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            +   + A+ L   ME    + D   + +LI   C  G++  A    E + + G   N+  
Sbjct: 959  KDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTT 1018

Query: 360  YNCIVDRLG 368
            Y  +V  + 
Sbjct: 1019 YRVLVSAIS 1027



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 150/339 (44%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            + +  ++  A ++I       V+P++ T+N+L+  Y +     + + + N MR +G  P+
Sbjct: 711  YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             +TY+SLI G   + +L   + +L   +      D  ++N L+    ++   D+   +  
Sbjct: 771  RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTH 830

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +M    ++    T   + + L +   + N       + K GF+P    Y  ++K +C+ G
Sbjct: 831  NMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVG 890

Query: 197  RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             ++ A  +  ++   G + +      +++      K +  + IL  M R         + 
Sbjct: 891  DIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFT 950

Query: 257  TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            T++  F K    KEA +    M    V+LDIV+YN LI+  C  G +  A    +E++++
Sbjct: 951  TLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQK 1010

Query: 317  GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            G   +  T+ +L+  +     +    + L+ +N  G  S
Sbjct: 1011 GLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVS 1049


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 204/419 (48%), Gaps = 16/419 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P+ +TY  ++D  C+     +   +L +M E   I P
Sbjct: 192 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIP 251

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV YN++I G  ++   S + +L  EM E  I PD+ +YN +++     G+  +A ++ 
Sbjct: 252 NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLL 311

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   + P   TF+ ++N   K      A  ++  +     +P  VTY+ +I G CK 
Sbjct: 312 QEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQ 371

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            RL  A  +       G +P+ IT+ T++    R ++   G+++L  M   G   +   Y
Sbjct: 372 NRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 431

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I  F ++G L  A D +++M++ GV  ++V+ NTL++  C  GKL+ A  +   M+K
Sbjct: 432 TTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 316 Q-----------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                       G E D  T+ ILI GL   G    A    E M   G   +   Y+ ++
Sbjct: 492 SKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           D L K  ++D A  +F+SM  K    D  T+++++   CKA  +    +L     + G+
Sbjct: 552 DGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 192/397 (48%), Gaps = 15/397 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           ++P+VV YN +ID   +       + +   M+E  I PD+VTYN +I G   +   S + 
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL EMLE  I PDV ++++L++   + GK  EA  ++ +M+   + P T T++ M++G 
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A  MF      G  P+++T+N LI G C+A R+     +L E+ ++G   N 
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           ITYTT++    +        ++L  M   G   +     T++      G+LK+A +  + 
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 488

Query: 278 MVT-----------DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           M             +GV+ D+ +YN LI     EGK   A  L +EM  +G   D  T++
Sbjct: 489 MQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 548

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGLCK   +  A    + M    F  ++  +N ++    K G +D  + +F  M   
Sbjct: 549 SMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQR 608

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             V D+ TY ++++   K   +  A  +    + SGV
Sbjct: 609 GIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGV 645



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 197/419 (47%), Gaps = 17/419 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +    K  R   A  + I+     + PD+VTYN +I+ +C    +     +L  M
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  I+PDVVT+++LI    +      + +L DEML   I P   +Y+S++    +  + 
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  +F        +P   TFN ++ G C+ +  D+ +++   + + G V   +TY  L
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-- 246
           I G C+ G L  A+ +L+E+  SG  PN +T  T++     N K K  LE+  AM++   
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 247 ---------GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
                    G   D   Y  +I   +  G+  EA +  E+M   G+  D ++Y+++I+  
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           CK+ +L+ A  + D M  + F  D  T   LI G CKAG +  G  L  E M + G  ++
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCE-MGQRGIVAD 613

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
              Y  ++    K   ID A+++F+ M       D+ T  +M+  L   + L  A  +L
Sbjct: 614 AITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAML 672



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 202/448 (45%), Gaps = 55/448 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  ++L  A +      +LG  P VVT+N L+   C          + ++M      P+
Sbjct: 126 FCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPN 181

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+ +L+ G  R   +  ++ LLD MLE G+ P+  +Y +++  + ++G    A  + +
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241

Query: 137 DM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M     + P    +N +++GL K+    +A  +F  +Q+    P++VTYN +I G C +
Sbjct: 242 KMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCIS 301

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR   A  +L+E+ +    P+ +T++ ++    +  K+    E+   M  +        Y
Sbjct: 302 GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F K  RL  A        T G   DI+++NTLI  YC+  +++    LL EM +
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   +  T+T LI G C+ G++  A+  L+ M   G   N+   N ++D L  +GK+  
Sbjct: 422 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKD 481

Query: 376 AINVFESME--------------------------------------------------V 385
           A+ +F++M+                                                  V
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLS 413
            D+ TYSSM+  LCK  RL  A+++  S
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDS 569



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 167/341 (48%), Gaps = 11/341 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +  +AE +  + +   ++P  VTY+ +ID +C+    DA   +       G SPD
Sbjct: 333 FVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPD 392

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++T+N+LIAG  R   +   + LL EM E G+  +  +Y +L+H   Q+G  + A  + Q
Sbjct: 393 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 452

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFVPELVTY 185
           +MI   + P   T N +L+GLC N    +AL MF+ +QK           +G  P++ TY
Sbjct: 453 EMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NILI GL   G+   A  + +E+   G  P+ ITY++++    +  +     ++  +M  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K ++ D   + T+I  + K G + +  +   +M   G+  D ++Y TLI  + K   ++ 
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDG 632

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           A  +  EM   G   D  T   ++ GL     ++ A   LE
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLE 673



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 159/310 (51%), Gaps = 13/310 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK NRL+ AE +       G  PD++T+N LI  YC+    D G  +L+ M EAG+  +
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY +LI G  +   L+ + DLL EM+  G+ P+V + N+L+  L   GK  +A  +F+
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 137 DM-----------ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            M               + P   T+NI++ GL        A  ++  +   G VP+ +TY
Sbjct: 488 AMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +I GLCK  RL  A  +   +G    +P+ +T+ T++    +      GLE+   M +
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
           +G   D   Y T+I  F K+  +  A D  ++M++ GV  D ++  N L  L+ KE +LE
Sbjct: 608 RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELE 666

Query: 305 AAYLLLDEME 314
            A  +L++++
Sbjct: 667 RAVAMLEDLQ 676



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 200/427 (46%), Gaps = 11/427 (2%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R   LP V+ +  L+    +    D   ++  +M    +  +  ++  L+      S L
Sbjct: 73  VRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKL 132

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L    ++ ++G  P V ++N+L+H L    +  EA  +F  M      P   TF  +
Sbjct: 133 PFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTL 188

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NGLC+      A+ +   + + G  P  +TY  ++ G+CK G   +A  +L+++ +  H
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN + Y TI+   +++ ++     +   M+ K    D   Y  +I  F   GR  +A 
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             +++M+   +  D+V+++ LIN + KEGK   A  L DEM  +       T++ +IDG 
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368

Query: 333 CKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           CK   +  A  H+ Y+    G   ++  +N ++    +  ++D  I +   M     V +
Sbjct: 369 CKQNRLDAAE-HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + TY++++H  C+   L +A  LL   + SGV         ++DGL  +G  ++A ++  
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487

Query: 448 KIRMAKI 454
            ++ +K+
Sbjct: 488 AMQKSKM 494



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 82/164 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +C      +  +AE +  +    G++PD +TY+ +ID  C+    D    + + M  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SPDVVT+N+LI G  +  ++   L+L  EM + GI  D  +Y +L++   ++   D 
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDG 632

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           A  +FQ+MI   + P T T   ML GL      + A+ M   LQ
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 2/197 (1%)

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           + F +I  L +A D    MV       ++ +  L+ +  + G+ +    L  +ME     
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           C+ Y+ TIL+   C    +  A      + K+GF   +  +N ++  L  + +I  A+++
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           F  M   +  T++++++ LC+  R+  A  LL   L+ G++  +     +VDG+   G  
Sbjct: 174 FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 440 REAKKIQSKIRMAKISH 456
             A  +  K  M ++SH
Sbjct: 234 VSALNLLRK--MEEVSH 248


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 212/438 (48%), Gaps = 4/438 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   +E A  + I+    G LP V TY  +I+ +C+   F A   +L  M  
Sbjct: 243 NTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNS 302

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++ +V  YN++I    ++  +  +++ ++ M+E G  PD+ +YN+L+    + GK  E
Sbjct: 303 RGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSE 362

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++ +  +   L P   ++  +++  CK    D A      + + G  P+LVTY  L+ 
Sbjct: 363 ADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVH 422

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL  AG +  A  I +++ + G  P+A  Y  +M    +  K      +L+ M  +    
Sbjct: 423 GLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 482

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T++  F++ G L EA    E  +  G+   IV YN +I  YCK G ++ A   +
Sbjct: 483 DAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 542

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M+K+    D++T++ +IDG  K  ++ GA+     M K+    N+  Y  +++   + 
Sbjct: 543 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  ++ +F  M+    V +  TYS ++ + CK  +L  A+      L +         
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTF 662

Query: 427 KAVVDGLRHSGCRREAKK 444
             +V+G   +G R  ++K
Sbjct: 663 NYLVNGFSKNGTRAISEK 680



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 197/411 (47%), Gaps = 9/411 (2%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            Y+ L+    +   F     +L  MR   +SP     + +I   + + L+  +L+L   +
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 104 LEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLC 158
           L+     PDV + NSL++ L +LG+ + A +++ +M+     GD      +  IM+ GLC
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLC 215

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    +   ++       G +P ++ YN LI G CK G +  A  +  EL   G  P   
Sbjct: 216 KEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVE 275

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY  I+    +   +K    +L  M  +G T +   Y T+I A  K G + +A + +E M
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 335

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G + DIV+YNTLI+  C++GK+  A  LL++   +G   +K+++T LI   CK G  
Sbjct: 336 IECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGY 395

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A   L  M + G   +L  Y  +V  L   G++D A+ + E M  +    D+  Y+ +
Sbjct: 396 DRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNIL 455

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +  LCK  +LP+A  LL   L   V         +VDG   +G   EA+K+
Sbjct: 456 MSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 4/403 (0%)

Query: 47  MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           +++   C+    + G  ++      G  P+++ YN+LI G  +   +  +  L  E+   
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G  P V +Y ++++   + G     +R+  +M    LT     +N +++   K+ +   A
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           +    G+ + G  P++VTYN LI G C+ G++  A  +L++    G  PN  +YT ++  
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +   Y      L  M  +G+  D   Y  ++   V  G +  A    E+M+  GV  D
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
              YN L++  CK+ KL AA LLL EM  Q    D + +  L+DG  + GN+  AR   E
Sbjct: 449 AGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE 508

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
              + G +  +  YN ++    K G +  A+     M+ +    D FTYS+++    K  
Sbjct: 509 LTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH 568

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            L  A K+    +K   +       ++++G    G    + KI
Sbjct: 569 DLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKI 611



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 165/367 (44%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           ++ ++ N  +    K   + KA   I   I  G  PD+VTYN LI   C+         +
Sbjct: 307 VNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQL 366

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L +    G+ P+  +Y  LI    +      + + L EM E G  PD+ +Y +L+H L  
Sbjct: 367 LEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVV 426

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ D A  + + M+   + P    +NI+++GLCK      A  +   +     +P+   
Sbjct: 427 AGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFV 486

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  + G L  AR + +   + G  P  + Y  ++K   +    K  +  ++ MK
Sbjct: 487 YATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 546

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           ++    D F Y TVI  +VK   L  A     +MV    + ++V+Y +LIN +C++G L 
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLH 606

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +  +  EM+  G   +  T++ILI   CK   +  A    E M       N   +N +V
Sbjct: 607 RSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLV 666

Query: 365 DRLGKDG 371
           +   K+G
Sbjct: 667 NGFSKNG 673



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 174/376 (46%), Gaps = 8/376 (2%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD--VWSYNS--LMHCLFQLGKPDE 130
           PDV+  NSL+    +   +  +  L DEMLE+    D  V +Y++  ++  L + GK +E
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEE 222

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             ++ +D       P    +N +++G CK    + A  +F  L+  GF+P + TY  +I 
Sbjct: 223 GRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 282

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G  +    +L E+   G   N   Y TI+   +++      +E +  M   G   
Sbjct: 283 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 342

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I+   + G++ EA   +EQ +  G+  +  SY  LI+ YCK+G  + A   L
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 402

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G + D  T+  L+ GL  AG +  A    E M + G   +   YN ++  L K 
Sbjct: 403 IEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKK 462

Query: 371 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            K+  A      + +   + D+F Y+++V    +   L  A KL    ++ G+       
Sbjct: 463 FKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGY 522

Query: 427 KAVVDGLRHSGCRREA 442
            A++ G    G  ++A
Sbjct: 523 NAMIKGYCKFGMMKDA 538



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/420 (22%), Positives = 196/420 (46%), Gaps = 39/420 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +   CK  +L  A+ ++ + +   VLPD   Y  L+D + +  + D    +    
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G++P +V YN++I G  +  ++  ++  ++ M +  + PD ++Y++++    +    
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A ++F++M+     P   T+  ++NG C+      +L++FR +Q  G VP +VTY+IL
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I   CK  +L  A    +E+  +   PN +T+  ++    +N           A+  KG 
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT--------RAISEKGN 682

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            F             +  +     ++  +M++DG      +YN+++   C+ G    A  
Sbjct: 683 EF-------------QENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQ 729

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA------YNC 362
           L ++M  +G   D  +   L+ G+C  G  K      E+ N +  + N         Y+ 
Sbjct: 730 LSNKMTSKGCIPDSVSFVALLHGVCLEGRSK------EWKNIVSCNLNERELQIAVNYSS 783

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           I+D+    G  + ++ + ++M  ++  ++S +  N+    ++  +++L L   K+GV +L
Sbjct: 784 ILDQYLPQGTSEASV-ILQTM-FEECQSHSKVGDNI----QVSFSNQLYLHDTKAGVTLL 837


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 205/423 (48%), Gaps = 5/423 (1%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
           KA ++  +  R GV PDVVTYN++IDA C+  + D    +L +M   G  PD VTY+ +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
            G      L  +  +  EM + G+ P++ + NS +  L + G+  EA   F  M      
Sbjct: 343 HGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHK 402

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   ++  +L+G        + + +F  ++ +G       + ILI    K G +  A  I
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
             E+   G +P+ +TY+T++    R  +    +E  + M  +G   +   Y ++I  F  
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522

Query: 265 IGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
            G L +A + + +M+  G+ + DIV ++++IN  CK+G++  A+ + D     G      
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVI 582

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T   LIDG C  G +  A   L+ M  +G + ++  YN ++D   K+G+I+  + +F  M
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           + K    ++ TY  M+  L +A R  +A K     ++SG  +  S    ++ GL  + C 
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702

Query: 440 REA 442
            EA
Sbjct: 703 DEA 705



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 195/409 (47%), Gaps = 8/409 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF-VSFDAGYTILNRMR 69
           NI +   C+A R +   A+    +R G+  D +T N L+   C    + +A   +L+RM 
Sbjct: 161 NILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMS 220

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGK 127
           E G  P+ V+Y+ ++     NS+   +LDLL  M + G    PDV +Y++++H  F  G+
Sbjct: 221 ELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGE 280

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A  +F +M    + P   T+N++++ LCK R  D A  + R +   G  P+ VTY+ 
Sbjct: 281 TGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSC 340

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I G    GRL+ A  + +E+   G  PN +T  + +    ++ + K   E   +M  KG
Sbjct: 341 MIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKG 400

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D F YCT++  +   G   +       M ++G+  +   +  LI+ Y K G ++ A 
Sbjct: 401 HKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAM 460

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L+  EM++QG   D  T++ +I    + G +  A      M   G   N   Y+ I+   
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520

Query: 368 GKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLL 411
              G +  A  +   M  K     D   +SS++++LCK  R+  A  + 
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 202/484 (41%), Gaps = 75/484 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CKA  ++KAE ++      G  PD VTY+ +I  Y           +   M++
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK 363

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P++VT NS +A   ++     + +  D M   G  PD++SY +L+H     G   +
Sbjct: 364 RGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFAD 423

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F  M    +      F I+++   K    D+A+ +F  +Q+ G  P++VTY+ +I 
Sbjct: 424 MIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              + GRL  A     ++   G  PN   Y++I++    +       E++S M  KG   
Sbjct: 484 TFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPR 543

Query: 251 -DGFGYCTVIAAFVKIGRLKEATDY----------------------------------- 274
            D   + +VI +  K GR+ +A D                                    
Sbjct: 544 PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++ M   GV+ DIV+YNTL++ Y K G++     L  EM+++G + +  T+ I++ GL +
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----------- 383
           AG    AR     M + G    +  Y  I+  L ++   D AI +F+ +           
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITI 723

Query: 384 ---------------EVKDSF-------------TYSSMVHNLCKAKRLPSASKLLLSCL 415
                          E K+ F             TY  M+ NL K   +  A+ +  S  
Sbjct: 724 LNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSME 783

Query: 416 KSGV 419
           KSG+
Sbjct: 784 KSGI 787



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 1/379 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +  I +  + K   ++ A  I  +  + GV PDVVTY+ +I  + +           N+M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGK 127
              GI P+   Y+S+I G   +  L  + +L+ EM+  GIP PD+  ++S+++ L + G+
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A+ +F         P   TFN +++G C     D A ++   ++  G  P++VTYN 
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G  K GR+     + +E+   G  PN +TY  ++   FR  +     +    M   G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            T     Y  ++    +     EA    +++ T  V+  I   NT+IN   K  + E A 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G   ++ T+ ++I  L K G ++ A      M K G        N I+  L
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801

Query: 368 GKDGKIDHAINVFESMEVK 386
            + G+I  A N    ++ K
Sbjct: 802 LEKGEIAKAGNYLSKVDGK 820



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 143/295 (48%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  R+  A  I      +G  P V+T+N LID YC     D  + IL+ M   G+ P
Sbjct: 555 SLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEP 614

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D+VTYN+L+ G  +N  ++  L L  EM   G+ P+  +Y  ++  LF+ G+   A + F
Sbjct: 615 DIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKF 674

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI    T   + + I+L GLC+N   D A+ +F+ L        +   N +I  + K 
Sbjct: 675 HEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKV 734

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A+ +   +  SG  PN  TY  ++    ++   +    + S+M++ G        
Sbjct: 735 QRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLL 794

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             +I   ++ G + +A +Y+ ++    + L+  + + +++L+ ++GK +    LL
Sbjct: 795 NRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 7/259 (2%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RW 203
           P   T+NI+++  C+ R  D  L +F  + + G   + +T N L+K LC A R   A   
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAA 261
           +L  + + G  PNA++Y+ ++K    N   +  L++L  M ++G   + D   Y TVI  
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F   G   +A     +M   GV+ D+V+YN +I+  CK   ++ A L+L +M   G + D
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T++ +I G    G +K A      M K G   N+   N  +  L K G+   A   F+
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 382 SMEVK----DSFTYSSMVH 396
           SM  K    D F+Y +++H
Sbjct: 395 SMTAKGHKPDIFSYCTLLH 413



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/341 (22%), Positives = 160/341 (46%), Gaps = 5/341 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC    L KA+ ++ + I  G+  PD+V ++ +I++ C+       + I +   + G  P
Sbjct: 520 FCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERP 579

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            V+T+NSLI G      +  +  +LD M  +G+ PD+ +YN+L+   F+ G+ ++   +F
Sbjct: 580 GVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLF 639

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M    + P T T+ IML GL +   T  A + F  + + G    +  Y I++ GLC+ 
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A  + ++LG      +     T++   ++ ++ +   E+ + +   G   +   Y
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTY 759

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I   +K G +++A +    M   G+       N +I +  ++G++  A   L +++ 
Sbjct: 760 GVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDG 819

Query: 316 QGFECDKYTHTILIDGLCKAG----NIKGARLHLEYMNKIG 352
           +    +  T ++++    + G    +IK      ++ N  G
Sbjct: 820 KRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQFFNGFG 860



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 42/259 (16%)

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
           R   +E G     P   TY  +M CC R R+  LGL +   + R G   D     T++  
Sbjct: 142 RVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKC 201

Query: 262 FVKIGRLKEATDY----------------------------MEQMVTDGVQL-------- 285
                R +EA +                             M Q   D +Q+        
Sbjct: 202 LCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGAC 261

Query: 286 --DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+V+Y+T+I+ +  EG+   A  L  EM +QG + D  T+ ++ID LCKA  +  A L
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
            L  M   G   +   Y+C++      G++  A  +F  M+    + +  T +S + +LC
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381

Query: 400 KAKRLPSASKLLLSCLKSG 418
           K  R   A++   S    G
Sbjct: 382 KHGRSKEAAEFFDSMTAKG 400


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 222/467 (47%), Gaps = 30/467 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +    +  +L +A  ++ + + +G+ PD+ +YN+++D  C+         ++  M  
Sbjct: 330 NIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIR 389

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD VTY++L+ G      +  + +LL EM+     P+ ++ N L+H L++ G+  E
Sbjct: 390 NGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISE 449

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG----------FV- 179
           A  + Q M        T T NI++N LC N   D A+ +  G+  HG          F+ 
Sbjct: 450 AENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIG 509

Query: 180 ------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
                       P+LVTY+ +I GLCKAGRL  A+    E+   G  P++  Y T +   
Sbjct: 510 LVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSF 569

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            R  K     ++L  M+++G       Y ++I       ++ E    +++M   GV  D+
Sbjct: 570 CREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDV 629

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            +YN ++N  C+ G++  A  +LDEM ++G   +  +  ILI   CKA + K +    E 
Sbjct: 630 CTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEI 689

Query: 348 -MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAK 402
            +N  G    L  Y  + + L   GK+  A  +FE+   +     +F Y  ++  LCK +
Sbjct: 690 ALNVCGHKEAL--YTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDE 747

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +L +AS +L   +  G +   ++   V+DG    G +  A ++  ++
Sbjct: 748 KLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794



 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 216/479 (45%), Gaps = 37/479 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  L N+ + +  + NR+E    +  D +   V P+  T+N+LI   C     +    + 
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M   G  P+  T+  L+ G  R  L S  L+LL +M  MGI P+   YN+L+    + 
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ---KHGFV-PE 181
           GK  +A ++   M    L P   TFN  ++ LC +     A R+FR +Q   + G   P 
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           ++TY +++ G CK G L  A+ ++  +  + +  N  +Y   +    RN K      +L 
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D + Y  V+    K G L +A   M  M+ +G+  D V+Y+TL++ YC +G
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKG 410

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+  A  LL EM       + YT  +L+  L K G I  A   L+ MN+ G+  +    N
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470

Query: 362 CIVDRLGKDGKIDHAINVFESME---------------------------VKDSFTYSSM 394
            I++ L  +G++D AI +   M                              D  TYS++
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           +  LCKA RL  A K  +  +  G++       A+ D   HS CR    KI S  ++ K
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQ----PDSAIYDTFIHSFCRE--GKISSAFQVLK 583



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 171/380 (45%), Gaps = 8/380 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P +  YN L+    R + +     L  +M+   + P+ +++N L+  L   G  ++A  
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  M      P   TF I++ G C+       L +   ++  G +P  V YN LI   C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK---RKGYTF 250
           K G+   A  ++ ++ + G  P+  T+ + +     + K      I   M+     G   
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 251 DG-FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y  ++  F K G L+EA   ++ M  +   +++ SYN  +    + GKL  A+++
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM   G E D Y++ I++DGLCK G +  AR+ +  M + G   +   Y+ ++     
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK+  A N+   M       +++T + ++H+L K  R+  A  LL    + G  +    
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              +++ L ++G   +A +I
Sbjct: 469 CNIIINALCNNGQLDKAIEI 488



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 26/372 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ + +  K  R+ +AE ++      G   D VT N++I+A C     D    I+N M  
Sbjct: 435 NVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWT 494

Query: 71  AG-----------------------ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
            G                        +PD+VTY+++I+G  +   L  +     EM+  G
Sbjct: 495 HGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKG 554

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + PD   Y++ +H   + GK   A +V +DM          T+N ++ GL          
Sbjct: 555 LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELY 614

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            +   +++ G  P++ TYN ++  LC+ GR+  A  +L E+   G +PN  ++  ++K  
Sbjct: 615 GLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674

Query: 228 FRNRKYKLGLEILS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            +   +K   E+   A+   G+      Y  +    +  G++ EA +  E  +     + 
Sbjct: 675 CKACDFKASHEVFEIALNVCGHK--EALYTLMFNELLVGGKVAEAKELFETALDRSFDIG 732

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
              Y  LI+  CK+ KLEAA  +L  +  +G++ D  +   +IDG  K GN   A    E
Sbjct: 733 NFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAE 792

Query: 347 YMNKIGFDSNLE 358
            M ++  +SN E
Sbjct: 793 RMMEMASESNKE 804



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 6/195 (3%)

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTD--GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            ++    K G   +A  + + + ++    Q  I  YN L+    +E ++E    L  +M 
Sbjct: 80  NLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
                 + YT  +LI  LC +G+++ AR   + M   G + N   +  +V    + G   
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
             + +   M     + ++  Y++++ + CK  +   A KL+    + G+        + +
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRI 259

Query: 431 DGLRHSGCRREAKKI 445
             L  SG   EA +I
Sbjct: 260 SALCGSGKILEASRI 274


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 200/402 (49%), Gaps = 4/402 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ V+Y++LI   C+    +  + + ++M E G  P   TY  LI       L+  + +L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEM+  G  P+V +Y  L+  L + GK +EAN V + M+   + P   T+N ++NG CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +     A  +   ++K    P + T+N L++GLC+ G+   A  +LK + D+G +P+ ++
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R        ++LS+M       D   +  +I AF K G+   A+ ++  M+
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+ LD V+  TLI+  CK GK   A  +L+ + K       ++  +++D L K   +K
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
                L  +NK+G   ++  Y  +VD L + G I  +  + E M++     + + Y+ ++
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           + LC+  R+  A KLL +   SGV         +V G  ++G
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 195/403 (48%), Gaps = 6/403 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           STR   + +   C    ++KA  +  + I  G  P+V TY +LID  C+    +    + 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M +  I P V+TYN+LI G  ++  +  + +LL  M +    P+V ++N LM  L ++
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GKP +A  + + M+   L+P   ++N++++GLC+  + + A ++   +      P+ +T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             +I   CK G+   A   L  +   G + + +T TT++    +  K +  L IL  + +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                       ++    K  ++KE    + ++   G+   +V+Y TL++   + G +  
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           ++ +L+ M+  G   + Y +TI+I+GLC+ G ++ A   L  M   G   N   Y  +V 
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659

Query: 366 RLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKR 403
               +GK+D A+    +M     E+ D   YSS++     +++
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRI-YSSLLQGFVLSQK 701



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 208/487 (42%), Gaps = 60/487 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  ++E+A  +    ++  + P V+TYN LI+ YC+       + +L  M +    P+
Sbjct: 346 LCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T+N L+ G  R      ++ LL  ML+ G+ PD+ SYN L+  L + G  + A ++  
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M C D+ P   TF  ++N  CK    D A      + + G   + VT   LI G+CK G
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525

Query: 197 RLRTARWILKEL-----------------------------------GDSGHAPNAITYT 221
           + R A +IL+ L                                      G  P+ +TYT
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    R+        IL  MK  G   + + Y  +I    + GR++EA   +  M   
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-------- 333
           GV  + V+Y  ++  Y   GKL+ A   +  M ++G+E +   ++ L+ G          
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDN 705

Query: 334 ----KAGNIKGARLHLEYMNKI--------GFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
                  +I       E +N++        G  S L  +  +V RL K+G+ D + ++ +
Sbjct: 706 SEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQ 763

Query: 382 SMEVKDSFTYSSM---VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ++  +  F   +M   + + C  K+     +L+   LKSG      +   V+ GL+  G 
Sbjct: 764 NVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGD 823

Query: 439 RREAKKI 445
              A+++
Sbjct: 824 AERAREL 830



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 8/312 (2%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +L G C+     +AL++F  + K     P  V+Y+ILI GLC+ GRL  A  +  ++G+ 
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+  TYT ++K             +   M  +G   +   Y  +I    + G+++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                +MV D +   +++YN LIN YCK+G++  A+ LL  MEK+  + +  T   L++G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KD 387
           LC+ G    A   L+ M   G   ++ +YN ++D L ++G ++ A  +  SM       D
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
             T++++++  CK  +   AS  L   L+ G+ + +     ++DG+   G  R+A  I  
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535

Query: 448 ---KIRMAKISH 456
              K+R+    H
Sbjct: 536 TLVKMRILTTPH 547



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 170/427 (39%), Gaps = 89/427 (20%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  +   C+  +  KA  ++   +  G+ PD+V+YN+LID  C+    +  Y 
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M    I PD +T+ ++I    +      +   L  ML  GI  D  +  +L+  + 
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++GK  +A  + + ++   +     + N++L+ L K       L M   + K G VP +V
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582

Query: 184 TYN-----------------------------------ILIKGLCKAGRLRTARWILKEL 208
           TY                                    I+I GLC+ GR+  A  +L  +
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV----- 263
            DSG +PN +TYT ++K    N K    LE + AM  +GY  +   Y +++  FV     
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702

Query: 264 ------------------------------------------------KIGRLKEATDYM 275
                                                           K GR  E+ D +
Sbjct: 703 IDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLV 762

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + ++  GV L+  + + ++  YC + K      L+  + K GF     +  ++I GL K 
Sbjct: 763 QNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKE 821

Query: 336 GNIKGAR 342
           G+ + AR
Sbjct: 822 GDAERAR 828



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 5/285 (1%)

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           +R ++  GFV  ++ Y  ++  LCK G    A   + ++   G   ++   T+++    R
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242

Query: 230 NRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
               +  L++   M ++     +   Y  +I    ++GRL+EA    +QM   G Q    
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y  LI   C  G ++ A+ L DEM  +G + + +T+T+LIDGLC+ G I+ A      M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
            K     ++  YN +++   KDG++  A  +   ME +    +  T++ ++  LC+  + 
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             A  LL   L +G+     +   ++DGL   G    A K+ S +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 54/243 (22%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G LP+V  Y ++I+  CQF   +    +L+ M+++G+SP+ VTY  ++ G   N  L  +
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMH------------------------------------ 120
           L+ +  M+E G   +   Y+SL+                                     
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISV 730

Query: 121 -----------CLFQL------GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
                      C+F +      G+ DE+N + Q+++   +       +I++   C  +  
Sbjct: 731 VEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF-LEKAMDIIMESYCSKKKH 789

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
              + +   + K GFVP   ++ ++I+GL K G    AR ++ EL  S          T 
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTY 849

Query: 224 MKC 226
           ++C
Sbjct: 850 VEC 852



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 23/299 (7%)

Query: 164 DNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           D  +R F  + KH  +  +    N L+K +  +G  R A  ++                 
Sbjct: 84  DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI---------------VA 128

Query: 223 IMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           ++K C R  K  L L       R+  G+  +   Y +++ +  K+     A     +M  
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           DG  + ++ Y T++N  CK G  EAA + + ++ K GF  D +  T L+ G C+  N++ 
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248

Query: 341 ARLHLEYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
           A    + M+K +    N  +Y+ ++  L + G+++ A  + + M  K     + TY+ ++
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             LC    +  A  L    +  G +        ++DGL   G   EA  +  K+   +I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 200/407 (49%), Gaps = 23/407 (5%)

Query: 18  CKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C+   L +A+ +  D +R+ G++P V+ Y +LI   C     +   ++   MRE G+ P+
Sbjct: 193 CRQGDLLRAQEMF-DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPN 251

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYN+L+ G  + +    +L L  +ML  G+ PDV ++  L+  L + G+   A  +F 
Sbjct: 252 VYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFV 311

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   +TP  A +N +++  CK      A+ +F  L++    P++ TY+ILI+GLC   
Sbjct: 312 NMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVS 371

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  I +++   G   N++TY +++  C +  K    LEI S M   G   +   + 
Sbjct: 372 RTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFS 431

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  + KI  L+ A     +MV   +  D+V+Y  +I+ +CK G ++ A  L  +M   
Sbjct: 432 TLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDN 491

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD---------------SNLEAYN 361
           G   + YT + L+DGLCK G I  A L L +  KI F                +N  AY 
Sbjct: 492 GITPNCYTISCLLDGLCKDGKISDA-LEL-FTEKIEFQTPRCNVDAGGSKPSLTNHVAYT 549

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
            ++  L +DG+   A+ +F  M       D   Y  M+  L + K +
Sbjct: 550 ALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 220/461 (47%), Gaps = 59/461 (12%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK   +E+A ++     ++G    +   N+L+    +   F+  + I   M   G+
Sbjct: 122 IIVLCKMELVEEALSMYH---KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGL 178

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SP V+T+ +LI G  R   L  + ++ DEM   GI P V  Y  L+  L    K +EA  
Sbjct: 179 SPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAES 238

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + + M    + P   T+N +++G CK      ALR+++ +   G VP++VT+ ILI GLC
Sbjct: 239 MHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLC 298

Query: 194 KAGRLRTARWILK----------------------ELGDSGHA-------------PNAI 218
           K G ++ AR +                        ++GD   A             P+  
Sbjct: 299 KFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVF 358

Query: 219 TYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           TY+ +++  C  +R  + G  I   M ++G   +   Y ++I    K G++ +A +   Q
Sbjct: 359 TYSILIRGLCSVSRTEEAG-NIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M  +GV+ ++++++TLI+ YCK   L+AA  +  EM  +    D  T+T +IDG CK G+
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477

Query: 338 IKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEV---------- 385
           +K A +L+ + ++  G   N    +C++D L KDGKI  A+ +F E +E           
Sbjct: 478 MKEALKLYSDMLDN-GITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAG 536

Query: 386 --KDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             K S T    Y++++H LC+  +   A KL     + G++
Sbjct: 537 GSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQ 577



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 134/297 (45%), Gaps = 7/297 (2%)

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK    + AL M+    K G    +   N+L+  L K GR      I +E+  +G +P+
Sbjct: 125 LCKMELVEEALSMY---HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPS 181

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+ T++  C R        E+   M+ KG       Y  +I       +++EA     
Sbjct: 182 VITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHR 241

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  ++ +YNTL++ YCK    + A  L  +M  +G   D  T  ILIDGLCK G
Sbjct: 242 AMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFG 301

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVK-DSFTYS 392
            +K AR     M K     N+  YN ++D   K G +  A+ +F   E  EV  D FTYS
Sbjct: 302 EMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYS 361

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++  LC   R   A  +     K G+        +++DG    G   +A +I S++
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQM 418



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 129/268 (48%), Gaps = 13/268 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK   + +A A+ ++  R  V PDV TY++LI   C     +    I  +M +
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  + VTYNSLI G  +   +  +L++  +M E G+ P+V ++++L+    ++     
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++ +M+   L+P   T+  M++G CK      AL+++  +  +G  P   T + L+ 
Sbjct: 446 AMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD 505

Query: 191 GLCKAGRLRTARWILKE----------LGDSGHAP---NAITYTTIMKCCFRNRKYKLGL 237
           GLCK G++  A  +  E          +   G  P   N + YT ++    ++ ++   +
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAV 565

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           ++ S M+R G   D   Y  ++    ++
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVMLRGLFQV 593


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 217/479 (45%), Gaps = 40/479 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  + +A R +    +    +R G+ PDV +YN LID + +    D  + +  +M E
Sbjct: 122 NILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEE 181

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+VVTY+SLI G  +   +  +  +L +M+  G+ P+  +YN L+H     G   E
Sbjct: 182 QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKE 241

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + RVF++M    L P     N  +  LCK+     A  +F  +   G  P++++Y  L+ 
Sbjct: 242 SVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLH 301

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   AG +     +   +   G  P+   + T++    R       L +   M ++G   
Sbjct: 302 GYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNP 361

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN------------------- 291
           D   + TVI+AF ++GRL +A +    M+  GV  D   Y+                   
Sbjct: 362 DIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELI 421

Query: 292 -----------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                            ++IN  CKEG++     ++D +   G   +  T   L+DG C 
Sbjct: 422 SDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCL 481

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            GN+K A   L+ M  +G + ++  YN +VD   K G+ID A+ +F  M  K     S +
Sbjct: 482 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 541

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+ ++H L +A+R   A ++    ++SG+ +       V+ GL  + C  EA  +  K+
Sbjct: 542 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 5/374 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P + TYN LI    R       L +   +L  G+ PDV+SYN+L+    + G+ D+A+ 
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  M    + P   T++ ++NGLCK +  D A R+ R +   G  P  +TYN LI G  
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G  + +  + KE+  S   P+     + M    ++ + K   +I  +M  KG   D  
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  +   G +    +    MV +GV  D   +NTLIN Y + G ++ + L+ ++M
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            KQG   D  T + +I   C+ G +  A     +M   G   +   Y+C++        +
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 414

Query: 374 DHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
             A  +   M  K         ++S+++NLCK  R+     ++   + +G R       +
Sbjct: 415 VKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNS 474

Query: 429 VVDGLRHSGCRREA 442
           +VDG    G  +EA
Sbjct: 475 LVDGYCLVGNMKEA 488



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 170/379 (44%), Gaps = 1/379 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  + +   ++K+  +  D  + GV PD++T++ +I A+C+    D      N M
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLGK 127
            + G+ PD   Y+ LI G      L  + +L+ +ML  GIPP  +  + S+++ L + G+
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E   V   +I     P   TFN +++G C       A+ +   ++  G  P++ TYN 
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G CK GR+  A  + +++        +++Y  I+   F+ R+  +  E+   M   G
Sbjct: 510 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 569

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y TV+    +     EA   +E++ +  V+ DI+++N +I    K G+ + A 
Sbjct: 570 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 629

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G      T+ ++I  L K  + + A      M K     +    N I+  L
Sbjct: 630 ELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRML 689

Query: 368 GKDGKIDHAINVFESMEVK 386
              G++  A N    ++ K
Sbjct: 690 LNKGEVAKAGNYLSKIDKK 708



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 148/309 (47%), Gaps = 4/309 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  T ++N      CK  R+ + + ++   I  G  P+++T+N L+D YC   +      
Sbjct: 435 KFFTSIIN----NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 490

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M   G+ PD+ TYN+L+ G  ++  +  +L L  +ML   +     SYN ++H LF
Sbjct: 491 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 550

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  +   A  +F +MI   +     T+  +L GLC+N  TD A  +   L       +++
Sbjct: 551 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 610

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+NI+I+ + K GR + A+ +   +   G  P  +TY  ++    +   ++    + S+M
Sbjct: 611 TFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 670

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++   T D      +I   +  G + +A +Y+ ++   G+  +  + + LI L+   GK 
Sbjct: 671 EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKY 730

Query: 304 EAAYLLLDE 312
                LL E
Sbjct: 731 REYIKLLPE 739



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTY-NMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C    L KA+ +I D +  G+ P  + +   +I+  C+      G  +++ +   G  P+
Sbjct: 409 CNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPN 468

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++T+NSL+ G      +  ++ LLD M  +G+ PD+++YN+L+    + G+ D+A  +F+
Sbjct: 469 LITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 528

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   +T  + ++NI+L+GL + R T  A  MF  + + G    + TY  ++ GLC+  
Sbjct: 529 DMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 588

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +L++L       + +T+  +++  F+  + +   E+ +A+   G       Y 
Sbjct: 589 CTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 648

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K    ++A +    M       D    N +I +   +G++  A   L +++K+
Sbjct: 649 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 708

Query: 317 GFECDKYTHTILI 329
           G   +  T ++LI
Sbjct: 709 GILPEATTTSLLI 721



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 19/357 (5%)

Query: 99  LLDEML-EMGIPPDVWSYNSLMHCLFQLGK-------PDEANRVFQDM---ICGDLTPCT 147
           L DE+L     P      N L+  L +          P  A  +F+ M    C +  P  
Sbjct: 59  LFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTI 118

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+NI++N   + R  D  L +F  L + G  P++ +YN LI G  K G +  A  +  +
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 178

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + + G  PN +TY++++    + ++      +L  M   G   +   Y  +I  +   G 
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
            KE+    ++M +  +  D+ + N+ +   CK G+++ A  + D M  +G + D  ++  
Sbjct: 239 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 298

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L+ G   AG I G       M   G   +   +N +++   + G +D ++ +FE M  + 
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
              D  T+S+++   C+  RL  A +     + +GV        AV   L    C R
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV----PPDTAVYSCLIQGQCNR 411



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           YT+ ILI+   +A            + + G   ++ +YN ++D   K+G++D A ++F  
Sbjct: 119 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 178

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ME    + +  TYSS+++ LCK K +  A ++L   + +GVR        ++ G   SG 
Sbjct: 179 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 238

Query: 439 RREAKKI 445
            +E+ ++
Sbjct: 239 WKESVRV 245


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 204/414 (49%), Gaps = 8/414 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVV+YN +ID   +    D  Y   + M +  +SPD VTYNS+IA  ++    + ++D 
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSK----AQAMDR 64

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             E+L + + P+ ++YNS+MH     G+ ++A  +F+ M    + P   T+N +++ LCK
Sbjct: 65  AMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N     A ++F  + K G  P++ TY  L+ G    G L     +L  +  +G   +   
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++    +  K    + + S M+++G T +   Y TVI    K+GRL +A    EQM+
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+  ++V Y +LI+  C   K E A  L+ E+  QG   +      ++D LCK G + 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            ++   + +  IG + ++  Y+ ++D     GK+D A+ +   M       DS TYS+++
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +  CK  R+  A  L      +GV         ++ GL  +     AK++ ++I
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    KA  +++A  ++     + V+P+  TYN ++  YC     +    I  +M  
Sbjct: 50  NSIIAALSKAQAMDRAMEVL----TVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCS 105

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PDVVTYNSL+    +N   + +  + D M++ G+ PD+ +Y +L+H     G   E
Sbjct: 106 DGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVE 165

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   +      FNI++    K    D  + +F  +++ G  P  V Y  +I 
Sbjct: 166 MHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVID 225

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK GRL  A    +++ D G  PN + YT+++       K++   E++  +  +G   
Sbjct: 226 GLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINP 285

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + T++ +  K GR+ E+    + +   GV  D+++Y+TLI+ YC  GK++ A  LL
Sbjct: 286 NIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL 345

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
             M   G + D  T++ LI+G CK   ++ A    + M   G + ++  YN I+  L
Sbjct: 346 TGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 163/353 (46%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C + + EKA  I       G+ PDVVTYN L+D  C+         I + M + G+ PD
Sbjct: 87  YCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPD 146

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TY +L+ G      L    DLL  M++ G+  D   +N L+    +  K DE   VF 
Sbjct: 147 ITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFS 206

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    LTP    +  +++GLCK    D+A+  F  +   G  P +V Y  LI  LC   
Sbjct: 207 KMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYD 266

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  ++ E+ D G  PN + + TI+    +  +     ++   +   G   D   Y 
Sbjct: 267 KWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYS 326

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I  +   G++  A   +  MV+ G++ D V+Y+TLIN YCK  ++E A  L  EME  
Sbjct: 327 TLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESN 386

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           G   D  T+ I++ GL +      A+     + + G    L  YN I+    K
Sbjct: 387 GVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAK 439



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 167/363 (46%), Gaps = 43/363 (11%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PPDV SYN+++  LF+ G  D+A   + +M+   ++P   T+N ++  L K +  D A+ 
Sbjct: 8   PPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAME 67

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +   +     +P   TYN ++ G C +G+   A  I +++   G  P+ +TY ++M    
Sbjct: 68  VLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +N K     +I  +M ++G   D   Y T++  +   G L E  D +  MV +G+QLD  
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            +N LI  Y K+ K++   L+  +M +QG   +   +  +IDGLCK G +  A L+ E M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 349 NKIGFDSNLEAY-----------------------------------NCIVDRLGKDGKI 373
              G   N+  Y                                   N I+D L K+G++
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             +  +F+ +       D  TYS+++   C A ++  A KLL   +  G++        +
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363

Query: 430 VDG 432
           ++G
Sbjct: 364 ING 366



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 130/265 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   + NI +C + K  ++++   +     + G+ P+ V Y  +ID  C+    D    
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
              +M + G++P+VV Y SLI           + +L+ E+L+ GI P++  +N+++  L 
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+  E+ ++F  +    + P   T++ +++G C     D A+++  G+   G  P+ V
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI G CK  R+  A  + KE+  +G  P+ ITY  I+   FR R+     E+ + +
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRL 268
              G   +   Y  ++  F K   L
Sbjct: 419 TESGTQLELSTYNIILMDFAKTNSL 443



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 135/309 (43%), Gaps = 8/309 (2%)

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G   P   ++N +++GL K    D A   +  +      P+ VTYN +I  L KA  +  
Sbjct: 5   GRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDR 64

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +L  +      PN  TY +IM     + + +  + I   M   G   D   Y +++ 
Sbjct: 65  AMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              K G+  EA    + MV  G++ DI +Y TL++ Y  +G L   + LL  M + G + 
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           D +   ILI    K   +    L    M + G   N   Y  ++D L K G++D A+  F
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           E M  K    +   Y+S++H LC   +   A +L+   L  G+         ++D L   
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKE 300

Query: 437 GCRREAKKI 445
           G   E+KK+
Sbjct: 301 GRVIESKKL 309


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 204/429 (47%), Gaps = 52/429 (12%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           VT+N++ID   +   FD  + IL  ++ + I     T++ LIA   ++ +   +++   +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M + G  PDV++YNS++H + Q      A  V+  M+  +  P  ATF I+LNGLCKN  
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           TD+AL+MF  + + G  P  + Y I++ GLC+A R      +L  +  SG  P++IT   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +  +      +L   +++GY     GY ++I    +  R  E  ++  +M   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY------------------- 323
           ++ D+V Y  LI  +C+ G ++ A  +L++M ++G   D Y                   
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 324 ----------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
                           T+TILI G+C+ G +  AR     M  +G   ++  +N ++D L
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 368 GKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSASKL 410
            K G+++ A ++F  ME                 V D+ +  +MV  LC++  +  A KL
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 411 LLSCLKSGV 419
           L+    SGV
Sbjct: 517 LMQLADSGV 525



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 205/458 (44%), Gaps = 19/458 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +  + K+   EKA          G  PDV TYN ++    Q   F     + N+M 
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQML 193

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +   +P+  T+  L+ G  +N     +L + DEM + GIPP+   Y  ++  L Q  + D
Sbjct: 194 KLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           + +R+   M      P + T N +L+G CK    D A  + +  +K G+V  +  Y+ LI
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL +A R    +   +++  +G  P+ + YT +++           L +L+ M ++G +
Sbjct: 314 DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  +I  F  +G L +A     ++  +       +Y  LI   C+ G L+ A  +
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQI 433

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL------------ 357
            ++ME  G      T   LIDGLCKAG ++ AR HL Y  +IG + +L            
Sbjct: 434 FNQMENLGCSPSIMTFNALIDGLCKAGELEEAR-HLFYKMEIGKNPSLFLRLSQGADRVM 492

Query: 358 --EAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +   +V+RL + G I  A    + + +S  V D  TY+ +++  CKAK +  A KL 
Sbjct: 493 DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLF 552

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 G          ++DG        +A ++  ++
Sbjct: 553 RELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 178/364 (48%), Gaps = 22/364 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  ++++A A++    + G +  +  Y+ LID   +   +D       +M +AGI PD
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  LI G     ++  +L++L++M + G+ PD + YN+L+     +G  D+A  +  
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++   D  P + T+ I++ G+C+N   D A ++F  ++  G  P ++T+N LI GLCKAG
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  AR +  ++ + G  P+                  L L +     R     D     
Sbjct: 461 ELEEARHLFYKM-EIGKNPS------------------LFLRLSQGADR---VMDTASLQ 498

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    + G + +A   + Q+   GV  DI++YN LIN +CK   +  A+ L  E++ +
Sbjct: 499 TMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLK 558

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  LIDG  +    + A   L+ M K G   +   Y C++    + GK+  A
Sbjct: 559 GHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVA 618

Query: 377 INVF 380
            +++
Sbjct: 619 FSLW 622



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 19/419 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  + + A  +  +  + G+ P+ + Y +++   CQ    D  + +LN M+ +G  PD
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +T N+L+ G  +   +  +  LL    + G    +  Y+SL+  LF+  + DE     +
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P    + I++ G C+    D AL M   + + G  P+   YN LIKG C  G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  AR +  E+  +   P + TYT ++    RN       +I + M+  G +     + 
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 257 TVIAAFVKIGRLKEATDYMEQM-----------VTDGVQ--LDIVSYNTLINLYCKEGKL 303
            +I    K G L+EA     +M           ++ G    +D  S  T++   C+ G +
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             AY LL ++   G   D  T+ +LI+G CKA NI GA      +   G   +   Y  +
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL-----CKAKRLPSASKLLLSCLKS 417
           +D   +  + + A  V + M VK+  T SS V+       C+  +L  A  L L  L+S
Sbjct: 571 IDGFHRVDREEDAFRVLDQM-VKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS 628



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 180/386 (46%), Gaps = 16/386 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  I +  FC+   ++ A  ++ D  + G+ PD   YN LI  +C     D   ++   +
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +    P   TY  LI G  RN LL  +  + ++M  +G  P + ++N+L+  L + G+ 
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462

Query: 129 DEANRVFQDMICG-------------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           +EA  +F  M  G             D    TA+   M+  LC++     A ++   L  
Sbjct: 463 EEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLAD 522

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G VP+++TYN+LI G CKA  +  A  + +EL   GH+P+++TY T++    R  + + 
Sbjct: 523 SGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREED 582

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIVSYNTLI 294
              +L  M + G T     Y  ++    + G+L  A   +++ + +   Q D      L 
Sbjct: 583 AFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED--ETLKLA 640

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             + ++G+LE A   L EM  +    +   +TI + GLC+A   + A      + +   D
Sbjct: 641 EEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMD 700

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVF 380
            N  +   +++ L KDG ++ A+++F
Sbjct: 701 VNPPSCVMLINGLCKDGNLEMAVDIF 726



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 4/306 (1%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T N++++ L K+   D   ++   L+         T+++LI    K+G    A     +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + D G  P+  TY +I+    +   + L L + + M +  Y  +   +  ++    K G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             +A    ++M   G+  + + Y  +++  C+  + +  + LL+ M+  G   D  T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESM 383
           L+DG CK G I  A   L+   K G+   ++ Y+ ++D L +  + D        +F++ 
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D   Y+ ++   C+   +  A  +L    + G+        A++ G    G   +A+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 444 KIQSKI 449
            +Q +I
Sbjct: 397 SLQLEI 402



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 34/300 (11%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           + T  L   V   C++  + KA  +++     GV+PD++TYN+LI+ +C+  + +  + +
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL-- 122
              ++  G SPD VTY +LI G  R      +  +LD+M++ G  P    Y  LM     
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611

Query: 123 --------------------------------FQLGKPDEANRVFQDMICGDLTPCTATF 150
                                           F+ G+ ++A R   +M         A +
Sbjct: 612 KGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPY 671

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
            I L GLC+ R ++ AL++F  L++        +  +LI GLCK G L  A  I     +
Sbjct: 672 TIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G          +++      K K  L++L+ M   GY  D + +  + +  + + + +E
Sbjct: 732 KGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQE 791



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/362 (20%), Positives = 145/362 (40%), Gaps = 49/362 (13%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C  C+   L++A  I      LG  P ++T+N LID  C+    +    +  +M E 
Sbjct: 416 ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EI 474

Query: 72  GISP--------------DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           G +P              D  +  +++     + L+  +  LL ++ + G+ PD+ +YN 
Sbjct: 475 GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNV 534

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L++   +    + A ++F+++     +P + T+  +++G  +    ++A R+   + K+G
Sbjct: 535 LINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNG 594

Query: 178 FVPELVTYNILIKGLCKAGRLRTA--RWI----------------LKELGDSGHAPNAI- 218
             P    Y  L+   C+ G+L  A   W+                 +E  + G    A+ 
Sbjct: 595 CTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVR 654

Query: 219 ---------------TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
                           YT  +    + R+ +  L+I   +K      +      +I    
Sbjct: 655 CLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLC 714

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K G L+ A D     +  G  L     N L+     + K++ A  LL+ M   G++ D+Y
Sbjct: 715 KDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEY 774

Query: 324 TH 325
            H
Sbjct: 775 LH 776


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 192/400 (48%), Gaps = 19/400 (4%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           + GV P +  YN LI++ C+    D   ++ N M   G+ P+ VTY+ LI    +   L 
Sbjct: 348 KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD 407

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
            +L  L +M E+GI   V+ Y+SL+  HC  +LGK   A  +F +MI   L P    +  
Sbjct: 408 VALHFLGKMTEVGIKATVYPYSSLISGHC--KLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++G CK     NA R++  +   G  P   T+  LI GLC A R+  A  +  E+ +  
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN +TY  +++   +        E+L  M  KG   D + Y  +I+     GR+ EA 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 273 DYMEQMVTDGVQL--------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           ++M  +  +  +L        ++V+Y  LIN  CK G ++ A LL  EM       ++ T
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645

Query: 325 HTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INV 379
           +   +D L   GNI K  +LH   +   GF +N   YN ++    K G+I  A    +N+
Sbjct: 646 YACFLDYLTSEGNIEKAIQLHDVLLE--GFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 703

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +S    D  +YS++++  C+   L  A KL  S L  GV
Sbjct: 704 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 743



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 184/379 (48%), Gaps = 4/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV  Y  ++ + C+   F     ++ RM  +G    V TYN  I G  +N  +  +
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +++ + +   G+  DV +Y +L+  L ++ + +    +  +MI     P  A  + +++G
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L K     +A  +   ++K G  P L  YN LI  +CK G+L  A  +   +G  G  PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY+ ++    +  K  + L  L  M   G     + Y ++I+   K+G+L+ A    +
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+ +G++ ++V Y +LI+ YCKEG+L  A+ L  EM  +G   + YT T LI GLC A 
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +  A      M +     N   YN +++   K+G    A  + + M     V D++TY 
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 393 SMVHNLCKAKRLPSASKLL 411
            ++  LC   R+  A + +
Sbjct: 570 PLISGLCSTGRVSEAREFM 588



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 207/442 (46%), Gaps = 23/442 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N+ +   CK  R+ +A  I       G+  DV TY  L+   C+   F+AG  +
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +N M E G  P     ++L+ G  +   +  + DL++++ + G+ P ++ YN+L++ + +
Sbjct: 308 MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK 367

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK DEA  +F +M    L P   T++I+++  CK    D AL     + + G    +  
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ LI G CK G+LR A+ +  E+  +G  PN + YT+++    +  +      +   M 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG + + + +  +I+      R+ EA     +MV   V  + V+YN LI  +CKEG   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LLDEM ++G   D YT+  LI GLC  G +  AR   E+MN               
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR---EFMN--------------- 589

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           D  G+  K++       ++      TY+++++ LCK   +  A  L    L S     ++
Sbjct: 590 DLQGEQQKLNEIEGCLPNV-----VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 644

Query: 425 AQKAVVDGLRHSGCRREAKKIQ 446
                +D L   G   +A ++ 
Sbjct: 645 TYACFLDYLTSEGNIEKAIQLH 666



 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 211/440 (47%), Gaps = 17/440 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  +L++AE++  +    G+ P+ VTY++LID++C+    D     L +M E
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI   V  Y+SLI+G  +   L  +  L DEM+  G+ P+V  Y SL+    + G+   
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R++ +M    ++P T TF  +++GLC       A ++F  + +   +P  VTYN+LI+
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNR--KYKLGLEILSAMKRKG 247
           G CK G    A  +L E+ + G  P+  TY  ++   C   R  + +  +  L   ++K 
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 248 YTFDG-----FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
              +G       Y  +I    KIG + +A     +M+      +  +Y   ++    EG 
Sbjct: 599 NEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +E A  L D +  +GF  +  T+ ILI G CK G I+ A   L  M   G   +  +Y+ 
Sbjct: 659 IEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 717

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           I+    + G +  AI ++ESM  +    D+  Y+ +++  C    L  A +L    ++ G
Sbjct: 718 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 777

Query: 419 VRILKSAQKAVVDGLRHSGC 438
           V+      +A  + L H  C
Sbjct: 778 VK----PNRATYNSLIHGTC 793



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 178/420 (42%), Gaps = 39/420 (9%)

Query: 30  IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR 89
            +D  R       + +++LI  Y Q      G  ++  M + GI P + T + ++ G  R
Sbjct: 133 FLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIR 192

Query: 90  NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 +L L DE++  G+ PDV+ Y +                                
Sbjct: 193 IRQFRMALHLFDEIVSSGLRPDVYVYTA-------------------------------- 220

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
              ++  LC+ +    A  +   ++  G    + TYN+ I+GLCK  R+  A  I   L 
Sbjct: 221 ---VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLS 277

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G   +  TY T++    +  +++ G E+++ M   G+         ++    K G + 
Sbjct: 278 YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A D + ++   GV   +  YN LIN  CK+GKL+ A  L + M  +G   +  T++ILI
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           D  CK G +  A   L  M ++G  + +  Y+ ++    K GK+  A ++F+ M      
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +   Y+S++   CK   L +A +L       G+        A++ GL H+    EA K+
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 64/115 (55%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +  FCK  R+++A  ++++ I  G+ PD ++Y+ +I  YC+         + 
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
             M   G++PD V YN LI G      L+ + +L D+M+  G+ P+  +YNSL+H
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 790



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 4/202 (1%)

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
            G+  +I  +V+  R  +    +  M+  G+   I + + ++N   +  +   A  L DE
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +   G   D Y +T ++  LC+  +   AR  +  M   G D ++  YN  +  L K+ +
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +  A+ +   +  K    D  TY ++V  LCK +   +  +++   ++ G    ++A   
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 429 VVDGLRHSGCRREAKKIQSKIR 450
           +VDGLR  G    A  + +K++
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVK 347


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 227/474 (47%), Gaps = 40/474 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  L++A  +++D    G+ P  + +N++I   C+         +  +M +A   PD
Sbjct: 90  LCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPD 148

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY  L+ G ++   L  ++ +L EM+     PD  +   ++  L    + D+A  + +
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKA 195
           +M+   +     T++ +++GLCK    D A+ +  G + + GF P++VTY+ +I GLCKA
Sbjct: 209 EMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKA 268

Query: 196 GRLRTARWILKELG--------------------------------DSGHAPNAITYTTI 223
           GRLR A  I +E+                                 D   AP+ ITYTT+
Sbjct: 269 GRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           M    +  +     E+   M     + D   + +++      GR+++A + +E++   G 
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              I +YN +++ YCK  ++  A  L+ +   +GF  +  T+ IL+ G C+AG    A  
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 344 HLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
           +L+ +N  G    +++  Y  I+D L +DG+ D A+  +E M     V  + T++++V  
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           LCKA +   A +LL   +K G         AVV     +G  ++A ++ S++R+
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 187/426 (43%), Gaps = 80/426 (18%)

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G  +L+ +R+ G+SPD V  N+++A        + ++ L D+M E+G       YN L+H
Sbjct: 30  GPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIH 88

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L +    DEA  +  DM    + P T   N+++ GLC+     +AL ++R +      P
Sbjct: 89  PLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPP 147

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP------------------------- 215
           + +TY  L+ GL KAGRLR A  +L+E+  + H P                         
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207

Query: 216 ----------NAITYTTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
                     NAITY+ ++    KC   +    L   +L  + R+G+T D   Y TVI  
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVAL---LLGEVTRRGFTPDIVTYSTVIDG 264

Query: 262 FVKIGRLKEATDYMEQ--------------------------------MVTDGVQLDIVS 289
             K GRL++A D  E+                                MV D    D+++
Sbjct: 265 LCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y TL++ +CK G+L+ AY L  +M       D  T T L+DGLC  G ++ A   LE + 
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
           + G    +  YNC+VD   K  ++  A  +         V ++ TY+ +V   C+A R  
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 406 SASKLL 411
            A + L
Sbjct: 445 QALQYL 450



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 191/388 (49%), Gaps = 11/388 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNS-LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M +AG   D  T+  ++ G   ++ L      LLDE+ + G+ PD    N+++  L    
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               A  +F  M        T  +N +++ LCK R  D A+ +   ++  G  P  + +N
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ++I GLC+AGRLR A  + +++ D+ H P+ +TYT ++    +  + +  +++L  M   
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EA 305
            +  D      V+ +     R+ +A + +E+M+  G+  + ++Y+ L++  CK  +L EA
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
             LLL E+ ++GF  D  T++ +IDGLCKAG ++ A   ++   ++        YN ++ 
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAITYNSLIG 295

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              + G +D AI +   M       D  TY++++   CK  RL  A +L    + + +  
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 ++VDGL   G   +A ++  +I
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEI 383



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 4/271 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C+A  +++A  ++   +     PDV+TY  L+ A+C+    D  Y +  +M  
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPDVVT+ SL+ G      +  +L+LL+E+   G PP +++YN ++    +  +  +
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVT-YNIL 188
           A  +  D       P T T+NI++ G C+   TD AL+    L    G  P  V  Y I+
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LC+ GR   A    +E+   G+ P A T+ T++    +  + +   E+L  M + G+
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 530

Query: 249 TFDGFGYC-TVIAAFVKIGRLKEATDYMEQM 278
           T  G G C  V++A+ + G +++A +   ++
Sbjct: 531 T-PGPGTCDAVVSAYCRAGMIQKADELASEL 560


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 217/479 (45%), Gaps = 40/479 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  + +A R +    +    +R G+ PDV +YN LID + +    D  + +  +M E
Sbjct: 193 NILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEE 252

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+VVTY+SLI G  +   +  +  +L +M+  G+ P+  +YN L+H     G   E
Sbjct: 253 QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKE 312

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + RVF++M    L P     N  +  LCK+     A  +F  +   G  P++++Y  L+ 
Sbjct: 313 SVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLH 372

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   AG +     +   +   G  P+   + T++    R       L +   M ++G   
Sbjct: 373 GYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNP 432

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN------------------- 291
           D   + TVI+AF ++GRL +A +    M+  GV  D   Y+                   
Sbjct: 433 DIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELI 492

Query: 292 -----------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                            ++IN  CKEG++     ++D +   G   +  T   L+DG C 
Sbjct: 493 SDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCL 552

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            GN+K A   L+ M  +G + ++  YN +VD   K G+ID A+ +F  M  K     S +
Sbjct: 553 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 612

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+ ++H L +A+R   A ++    ++SG+ +       V+ GL  + C  EA  +  K+
Sbjct: 613 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 5/374 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P + TYN LI    R       L +   +L  G+ PDV+SYN+L+    + G+ D+A+ 
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  M    + P   T++ ++NGLCK +  D A R+ R +   G  P  +TYN LI G  
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            +G  + +  + KE+  S   P+     + M    ++ + K   +I  +M  KG   D  
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  +   G +    +    MV +GV  D   +NTLIN Y + G ++ + L+ ++M
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            KQG   D  T + +I   C+ G +  A     +M   G   +   Y+C++        +
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 485

Query: 374 DHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
             A  +   M  K         ++S+++NLCK  R+     ++   + +G R       +
Sbjct: 486 VKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNS 545

Query: 429 VVDGLRHSGCRREA 442
           +VDG    G  +EA
Sbjct: 546 LVDGYCLVGNMKEA 559



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 170/379 (44%), Gaps = 1/379 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  + +   ++K+  +  D  + GV PD++T++ +I A+C+    D      N M
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLGK 127
            + G+ PD   Y+ LI G      L  + +L+ +ML  GIPP  +  + S+++ L + G+
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E   V   +I     P   TFN +++G C       A+ +   ++  G  P++ TYN 
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G CK GR+  A  + +++        +++Y  I+   F+ R+  +  E+   M   G
Sbjct: 581 LVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG 640

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y TV+    +     EA   +E++ +  V+ DI+++N +I    K G+ + A 
Sbjct: 641 MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAK 700

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G      T+ ++I  L K  + + A      M K     +    N I+  L
Sbjct: 701 ELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRML 760

Query: 368 GKDGKIDHAINVFESMEVK 386
              G++  A N    ++ K
Sbjct: 761 LNKGEVAKAGNYLSKIDKK 779



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 148/309 (47%), Gaps = 4/309 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  T ++N      CK  R+ + + ++   I  G  P+++T+N L+D YC   +      
Sbjct: 506 KFFTSIIN----NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 561

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M   G+ PD+ TYN+L+ G  ++  +  +L L  +ML   +     SYN ++H LF
Sbjct: 562 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 621

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  +   A  +F +MI   +     T+  +L GLC+N  TD A  +   L       +++
Sbjct: 622 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDIL 681

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+NI+I+ + K GR + A+ +   +   G  P  +TY  ++    +   ++    + S+M
Sbjct: 682 TFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSM 741

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++   T D      +I   +  G + +A +Y+ ++   G+  +  + + LI L+   GK 
Sbjct: 742 EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKY 801

Query: 304 EAAYLLLDE 312
                LL E
Sbjct: 802 REYIKLLPE 810



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTY-NMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C    L KA+ +I D +  G+ P  + +   +I+  C+      G  +++ +   G  P+
Sbjct: 480 CNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPN 539

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++T+NSL+ G      +  ++ LLD M  +G+ PD+++YN+L+    + G+ D+A  +F+
Sbjct: 540 LITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 599

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   +T  + ++NI+L+GL + R T  A  MF  + + G    + TY  ++ GLC+  
Sbjct: 600 DMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNN 659

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  +L++L       + +T+  +++  F+  + +   E+ +A+   G       Y 
Sbjct: 660 CTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYR 719

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K    ++A +    M       D    N +I +   +G++  A   L +++K+
Sbjct: 720 VMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779

Query: 317 GFECDKYTHTILI 329
           G   +  T ++LI
Sbjct: 780 GILPEATTTSLLI 792



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 19/357 (5%)

Query: 99  LLDEML-EMGIPPDVWSYNSLMHCLFQLGK-------PDEANRVFQDM---ICGDLTPCT 147
           L DE+L     P      N L+  L +          P  A  +F+ M    C +  P  
Sbjct: 130 LFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEAAPTI 189

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+NI++N   + R  D  L +F  L + G  P++ +YN LI G  K G +  A  +  +
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 249

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + + G  PN +TY++++    + ++      +L  M   G   +   Y  +I  +   G 
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
            KE+    ++M +  +  D+ + N+ +   CK G+++ A  + D M  +G + D  ++  
Sbjct: 310 WKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGA 369

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L+ G   AG I G       M   G   +   +N +++   + G +D ++ +FE M  + 
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
              D  T+S+++   C+  RL  A +     + +GV        AV   L    C R
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV----PPDTAVYSCLIQGQCNR 482



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           YT+ ILI+   +A            + + G   ++ +YN ++D   K+G++D A ++F  
Sbjct: 190 YTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYK 249

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ME    + +  TYSS+++ LCK K +  A ++L   + +GVR        ++ G   SG 
Sbjct: 250 MEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGM 309

Query: 439 RREAKKI 445
            +E+ ++
Sbjct: 310 WKESVRV 316


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 192/403 (47%), Gaps = 23/403 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    NI +   CK   LE A ++       G  PD+VTYN LID + +    D    
Sbjct: 53  KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECIC 112

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I  +M++A   PDV+TYN+LI    +   +  + + L EM   G+ P+V +Y++ +    
Sbjct: 113 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 172

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   EA + F DM    LTP   T+  +++  CK      AL++   + + G    +V
Sbjct: 173 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 232

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ GLC+ GR++ A  + + + ++G APN  TYT ++    + ++ +   +IL  M
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK- 302
           K K    D   Y T++       RL+EA   + ++   G+  + V Y TL++ Y K G+ 
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352

Query: 303 ----------------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
                                  E A  L DEM  +G   DK  +T LIDG  K GN++ 
Sbjct: 353 TEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           A    + M +IG + +L AY  ++  L   G++  A N+ + M
Sbjct: 413 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM 455



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 16/413 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+   V TYN++ID  C+    +   ++  +M+EAG +PD+VTYNSLI G  +  LL   
Sbjct: 51  GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 110

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + + ++M +    PDV +YN+L++C  +  +  +A     +M    L P   T++  ++ 
Sbjct: 111 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 170

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK      A++ F  +++    P   TY  LI   CKAG L  A  +++E+  +G   N
Sbjct: 171 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 230

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYT ++       + K   E+  AM   G   +   Y  ++  F+K   ++ A D ++
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 290

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M    ++ D++ Y T++   C E +LE A LL+ E+++ G   +   +T L+D   K+G
Sbjct: 291 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 350

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A   LE M              +VD L K+   + A  +F+ M  K    D   Y+
Sbjct: 351 QATEALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 398

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +++    K   L  A  L    ++ G+ +   A  A++ GL HSG  ++A+ +
Sbjct: 399 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL 451



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 184/373 (49%), Gaps = 12/373 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  R+ KA   + +    G+ P+VVTY+  IDA+C+             MR 
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 189

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ++P+  TY SLI    +   L+ +L L++E+L+ GI  +V +Y +L+  L + G+  E
Sbjct: 190 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 249

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF+ M+   + P   T+  +++G  K +  + A  + + +++    P+L+ Y  ++ 
Sbjct: 250 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 309

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   RL  A+ ++ E+ +SG   NA+ YTT+M   F++ +    L +L  M       
Sbjct: 310 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM------- 362

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                  ++    K    + A    ++M+  G+  D ++Y  LI+   K G L+ A  L 
Sbjct: 363 -----LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLR 417

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M + G E D + +T LI GL  +G ++ AR  L+ M   G   +   Y C++ +    
Sbjct: 418 DRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 477

Query: 371 GKIDHAINVFESM 383
           GK+D A+ +   M
Sbjct: 478 GKVDEALELQNEM 490



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 4/337 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   S N+L+H L ++G+ D + + F+DM    +     T+NIM++ LCK    + A  +
Sbjct: 19  PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  +++ GF P++VTYN LI G  K G L     I +++ D+   P+ ITY  ++ C  +
Sbjct: 79  FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
             +     E L  MK  G   +   Y T I AF K G L+EA  +   M    +  +  +
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y +LI+  CK G L  A  L++E+ + G + +  T+T L+DGLC+ G +K A      M 
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
             G   N E Y  +V    K  ++++A ++ + M+ K    D   Y +++  LC   RL 
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            A  L+    +SG+         ++D    SG   EA
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 355



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 189/427 (44%), Gaps = 8/427 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LE+A    +   +  V P   + N L+    +    D        M  AGI   V TYN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           +I    +   L  +  L  +M E G  PD+ +YNSL+    +LG  DE   +F+ M   D
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   T+N ++N  CK      A      ++ +G  P +VTY+  I   CK G L+ A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
               ++      PN  TYT+++    +       L+++  + + G   +   Y  ++   
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            + GR+KEA +    M+  GV  +  +Y  L++ + K  ++E A  +L EM+++  + D 
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             +  ++ GLC    ++ A+L +  + + G ++N   Y  ++D   K G+   A+ + E 
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 383 MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           M          +V  LCK      A KL    L  G+   K A  A++DG    G  +EA
Sbjct: 362 M--------LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 413

Query: 443 KKIQSKI 449
             ++ ++
Sbjct: 414 LNLRDRM 420



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 23/325 (7%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCK   L++A    +D  R+ + P+  TY  LIDA C+  +      ++  + +AGI  
Sbjct: 170 AFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKL 229

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY +L+ G      +  + ++   ML  G+ P+  +Y +L+H   +  + + A  + 
Sbjct: 230 NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDIL 289

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL------- 188
           ++M    + P    +  +L GLC     + A  +   +++ G     V Y  L       
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 349

Query: 189 ----------------IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
                           + GLCK      A+ +  E+ D G  P+ I YT ++    ++  
Sbjct: 350 GQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            +  L +   M   G   D   Y  +I      G++++A + +++M+  GV  D V Y  
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQG 317
           LI  Y   GK++ A  L +EM K+G
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRG 494



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 41/327 (12%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA+  F  M    + P   + N +L+ L K    D + + F+ +   G    + TYNI+
Sbjct: 3   EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE-----ILSAM 243
           I  LCK G L  AR +  ++ ++G  P+ +TY +++     +   KLGL      I   M
Sbjct: 63  IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI-----DGHGKLGLLDECICIFEQM 117

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K      D   Y  +I  F K  R+ +A +++ +M  +G++ ++V+Y+T I+ +CKEG L
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A     +M +     +++T+T LID  CKAGN+  A   +E + + G   N+      
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNV------ 231

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
                                     TY++++  LC+  R+  A ++  + L +GV   +
Sbjct: 232 -------------------------VTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 266

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIR 450
               A+V G   +     AK I  +++
Sbjct: 267 ETYTALVHGFIKAKEMEYAKDILKEMK 293



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 4/171 (2%)

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           S N L++   K G+ + +     +M   G +   +T+ I+ID LCK G+++ AR     M
Sbjct: 23  SCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM 82

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 404
            + GF  ++  YN ++D  GK G +D  I +FE M+      D  TY+++++  CK +R+
Sbjct: 83  KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERM 142

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           P A + L     +G++         +D     G  +EA K    +R   ++
Sbjct: 143 PKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALT 193



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 4/195 (2%)

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K+GR   +  + + M   G++  + +YN +I+  CKEG LE A  L  +M++ GF  D  
Sbjct: 33  KVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV 92

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  LIDG  K G +       E M     D ++  YN +++   K  ++  A      M
Sbjct: 93  TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 152

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           +      +  TYS+ +   CK   L  A K  +   +  +   +    +++D    +G  
Sbjct: 153 KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNL 212

Query: 440 REAKKIQSKIRMAKI 454
            EA K+  +I  A I
Sbjct: 213 AEALKLVEEILQAGI 227


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 211/445 (47%), Gaps = 9/445 (2%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C +  L+ A  I+ +    G  P+VV Y  LI  + Q   F     +L  MRE GI+PD 
Sbjct: 431 CSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDT 490

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
             YNSLI G ++   +  +   L EM+E G  PD ++Y + +    + G+   A++  ++
Sbjct: 491 FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKE 550

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   + P       ++N  CK      A   FR + + G + +  TY +L+ GL K G+
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  I  E+   G AP+  +Y T++    +    +    I   M + G T +   Y  
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++  F + G +++A + +++M   G   + V+Y T+I+ YCK G L  A+ L DEM+ +G
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG 730

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D + +T L+DG C+  +++ A    E  N+ G  S+   +N +++ + K GK +   
Sbjct: 731 LVPDSFVYTTLVDGCCRLNDVERAITIFE-TNEKGCASSSAPFNALINWVFKFGKTELTT 789

Query: 378 NV--------FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           ++        F+     +  TY+ M+  LCK   L +A +L     K+ +        ++
Sbjct: 790 DMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSL 849

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
           ++G    G R E   +  ++  A I
Sbjct: 850 LNGYDKMGRRSEMFSVFDEVIAAGI 874



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 184/406 (45%), Gaps = 35/406 (8%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAY--------------------- 52
           +C   K   +EKA+A+    I  GV P    Y  LI+ +                     
Sbjct: 357 ICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNI 416

Query: 53  --------------CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
                         C     D  Y I+  M  +G  P+VV Y +LI    + S    ++ 
Sbjct: 417 VISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVR 476

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L EM E GI PD + YNSL+  L +  K DEA     +M+     P   T+   ++G  
Sbjct: 477 VLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYI 536

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +     +A +  + + + G +P  V    LI   CK G++  A    + + + G   +A 
Sbjct: 537 EAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAK 596

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TYT +M    +N K     EI   M+ KG   D F Y T+I  F K+G +++A+   ++M
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM 656

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V  G+  +++ YN L+  +C+ G++E A  LLDEM  +GF  +  T+  +IDG CK+G++
Sbjct: 657 VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDL 716

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
             A    + M   G   +   Y  +VD   +   ++ AI +FE+ E
Sbjct: 717 AEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE 762



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 210/451 (46%), Gaps = 6/451 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  N+ +   CK  RLE A++++++   +G+  D V Y++LID   +  + DA   ++
Sbjct: 279 SRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLV 338

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   G S D + Y+  I   ++   +  +  L D M+  G+ P   +Y SL+   F+ 
Sbjct: 339 HEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFRE 398

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
               +   +  ++   ++     T+   + G+C +   D A  + + +   G  P +V Y
Sbjct: 399 KNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIY 458

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LIK   +  R   A  +LKE+ + G AP+   Y +++    + +K       L  M  
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G+  D F Y   I+ +++ G    A  Y+++M+  GV  + V    LIN YCK+GK+  
Sbjct: 519 NGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIE 578

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A      M +QG   D  T+T+L++GL K G +  A      M   G   ++ +Y  ++D
Sbjct: 579 ACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLID 638

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL-----CKAKRLPSASKLLLSCLKSGVR 420
              K G +  A ++F+ M V+   T + +++N+     C++  +  A +LL      G  
Sbjct: 639 GFSKLGNMQKASSIFDEM-VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
                   ++DG   SG   EA ++  ++++
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL 728



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 195/413 (47%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P   +YN+LID  C+    +   ++L  M   G+  D V Y+ LI G  +      +
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L+ EM+  G   D   Y+  +  + + G  ++A  +F  MI   +TP    +  ++ G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             + +       +   ++K   V    TY   +KG+C +G L  A  I+KE+G SG  PN
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + YTT++K   +  ++   + +L  M+ +G   D F Y ++I    K  ++ EA  ++ 
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV +G + D  +Y   I+ Y + G+  +A   + EM + G   +K   T LI+  CK G
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A      M + G   + + Y  +++ L K+GK++ A  +F  M  K    D F+Y 
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +++    K   +  AS +    +++G+         ++ G   SG   +AK++
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKEL 687



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 194/442 (43%), Gaps = 25/442 (5%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + L ++P +   N L+DA  +    D  + +   M E  +  DV +Y  LI    R+  +
Sbjct: 181 LDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNV 240

Query: 94  SCSLDLL--------------DEMLEM-------GIPPDVWSYNSLMHCLFQLGKPDEAN 132
             + D+L              DE LE+       G+ P   SYN L+  L +  + ++A 
Sbjct: 241 QLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAK 300

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            +  +M    L      ++I+++GL K R  D A  +   +  HGF  + + Y+  I  +
Sbjct: 301 SLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVM 360

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            K G +  A+ +   +   G  P A  Y ++++  FR +  + G E+L  +K++      
Sbjct: 361 SKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISP 420

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           + Y T +      G L  A + +++M   G + ++V Y TLI  + ++ +   A  +L E
Sbjct: 421 YTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M +QG   D + +  LI GL KA  +  AR  L  M + GF  +   Y   +    + G+
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540

Query: 373 IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
              A    + M     + +    + +++  CK  ++  A     S ++ G+         
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600

Query: 429 VVDGLRHSGCRREAKKIQSKIR 450
           +++GL  +G   +A++I  ++R
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMR 622



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 162/344 (47%), Gaps = 10/344 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  ++  AE I  +    G+ PDV +Y  LID + +  +     +I + M +AG++ +V+
Sbjct: 607 KNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVI 666

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN L+ G  R+  +  + +LLDEM   G PP+  +Y +++    + G   EA ++F +M
Sbjct: 667 IYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM 726

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P +  +  +++G C+    + A+ +F   +K G       +N LI  + K G+ 
Sbjct: 727 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK-GCASSSAPFNALINWVFKFGKT 785

Query: 199 RTARWILKELGDSGH----APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
                ++  L D        PN +TY  ++    +    +   E+   M++         
Sbjct: 786 ELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVIT 845

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++  + K+GR  E     ++++  G++ D + Y+ +IN + KEG    A +LLD+M 
Sbjct: 846 YTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMF 905

Query: 315 KQ-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            +     G +    T   L+ G  K G ++ A   +E M ++ +
Sbjct: 906 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKY 949



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 138/299 (46%), Gaps = 10/299 (3%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +  FC++  +EKA+ ++ +    G  P+ VTY  +ID YC+       + + + M
Sbjct: 667 IYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM 726

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  G+ PD   Y +L+ G  R + +  ++ +  E  E G       +N+L++ +F+ GK 
Sbjct: 727 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKT 785

Query: 129 DEANRVFQDMICGDL----TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +    +   ++ G       P   T+NIM++ LCK    + A  +F  +QK   +P ++T
Sbjct: 786 ELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVIT 845

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  K GR      +  E+  +G  P+ I Y+ I+    +       L +L  M 
Sbjct: 846 YTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMF 905

Query: 245 RKGYTFDG----FGYC-TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            K    DG       C  +++ F K+G ++ A   +E MV      D  +   LIN  C
Sbjct: 906 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FGK +    NI +   CK   LE A+ +     +  ++P V+TY  L++ Y +       
Sbjct: 803 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEM 862

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-----VWSYN 116
           +++ + +  AGI PD + Y+ +I    +  + + +L LLD+M       D     + +  
Sbjct: 863 FSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR 922

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L+    ++G+ + A +V ++M+     P ++T   ++N  C
Sbjct: 923 ALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 205/409 (50%), Gaps = 9/409 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           N  V  FCKA RL +A  ++ + ++ G    P++VTY++LID YC+      G  +L  M
Sbjct: 153 NTLVNGFCKAKRLAEAR-VLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+  DV  Y+SLI+       +    +L DEML   + P+V +Y+ LM  L + G+ 
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA+ + +DM    + P    + ++ +GLCKN    +A+++   + + G  P  +TYN++
Sbjct: 272 REASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + GLCK  R+  A  +++ +   G  P+A+TY T++K      K    +++   +  + +
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF 391

Query: 249 TF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D F    +I    K GR+ +A      MV  G+Q +IV+YN LI  Y    KL  A
Sbjct: 392 HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L     + GF  +  T++++I+GLCK   +  AR     M   G    +  YN ++  
Sbjct: 452 LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTS 511

Query: 367 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           L ++  ++ A ++F+ M       D  +++ ++    KA  + SA +LL
Sbjct: 512 LCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL 560



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 204/451 (45%), Gaps = 46/451 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           LN+ +  FC++ + +KA ++     R    V+PD VTYN L++ +C+         +   
Sbjct: 115 LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEA 174

Query: 68  MREAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M++ G   P++VTY+ LI    ++  +   L LL+EM   G+  DV+ Y+SL+      G
Sbjct: 175 MKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             +    +F +M+                                   +    P +VTY+
Sbjct: 235 DIETGRELFDEML-----------------------------------RRKVSPNVVTYS 259

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L++GL + GR R A  +LK++   G  P+ + YT +     +N +    +++L  M +K
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y  V+    K  R+ +A   +E MV  G + D V+YNTL+   C  GK+  A
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA 379

Query: 307 YLLLDEMEKQGFEC--DKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCI 363
             L   +  + F    D +T   LI GLCK G +   AR+H   M ++G   N+  YN +
Sbjct: 380 MDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH-SSMVEMGLQGNIVTYNFL 438

Query: 364 VDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++      K+  A+ ++    ES    +S TYS M++ LCK + L  A  L      SG+
Sbjct: 439 IEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGI 498

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           R       A++  L       +A+ +  ++R
Sbjct: 499 RPTVIDYNALMTSLCREDSLEQARSLFQEMR 529



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 192/392 (48%), Gaps = 13/392 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P     + LID   +   +DA  ++ ++M  A + P   + ++L          S +  +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLN 155
           L  M + G   +V++ N ++    + G+ D+A  +F  M     C  + P   T+N ++N
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC--VVPDCVTYNTLVN 157

Query: 156 GLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           G CK +    A  +F  ++K G   P LVTY++LI   CK+G +     +L+E+   G  
Sbjct: 158 GFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLK 217

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +   Y++++         + G E+   M R+  + +   Y  ++    + GR +EA++ 
Sbjct: 218 ADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM 277

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++ M   GV+ D+V+Y  L +  CK G+   A  +LD M ++G E    T+ ++++GLCK
Sbjct: 278 LKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCK 337

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-----ESMEVK-DS 388
              +  A   +E M K G   +   YN ++  L   GKI  A++++     E   VK D 
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDV 397

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           FT ++++  LCK  R+  A+++  S ++ G++
Sbjct: 398 FTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQ 429



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 167/367 (45%), Gaps = 37/367 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  R  +A  ++ D    GV PDVV Y +L D  C+         +L+ M + G  P  +
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TYN ++ G  +   +  +  +++ M++ G  PD  +YN+L+  L   GK  EA  +++ +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 139 ICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +     + P   T N ++ GLCK     +A R+   + + G    +VTYN LI+G   A 
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  + K   +SG +PN++TY+ ++                             G C
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMIN----------------------------GLC 478

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                  K+  L  A     +M   G++  ++ YN L+   C+E  LE A  L  EM   
Sbjct: 479 -------KMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV 531

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
               D  +  I+IDG  KAG++K A+  L  M  +    +   ++ +++R  K G +D A
Sbjct: 532 NHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEA 591

Query: 377 INVFESM 383
           + ++E M
Sbjct: 592 MGLYEKM 598



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 3/321 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-- 68
           N+ V   CK +R++ A  ++   ++ G  PD VTYN L+   C          +   +  
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  + PDV T N+LI G  +   +  +  +   M+EMG+  ++ +YN L+       K 
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKL 448

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA ++++  +    +P + T+++M+NGLCK +    A  +F  ++  G  P ++ YN L
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL 508

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LC+   L  AR + +E+ +  H  + +++  I+    +    K   E+LS M     
Sbjct: 509 MTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDL 568

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   +  +I  F K+G L EA    E+MV+ G    +V +++L+  Y  +G+ E    
Sbjct: 569 VPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIIS 628

Query: 309 LLDEMEKQGFECD-KYTHTIL 328
           LL +M  +    D K T TIL
Sbjct: 629 LLHQMADKDVVLDSKLTSTIL 649



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 45/350 (12%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP   + ++L+  L +  + D    V+  M+   + P   + + +        +   A  
Sbjct: 39  PPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFS 98

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAG-------------------------------- 196
           +   + K GF   +   N+++KG C++G                                
Sbjct: 99  VLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNG 158

Query: 197 -----RLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                RL  AR + + +   G   PN +TY+ ++ C  ++ +   GL +L  M+R+G   
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y ++I+AF   G ++   +  ++M+   V  ++V+Y+ L+    + G+   A  +L
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G   D   +T+L DGLCK G    A   L+ M + G +     YN +V+ L K+
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS---KLLLS 413
            ++D A  V E M  K    D+ TY++++  LC A ++  A    KLLLS
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS 388



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 1/222 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +  A +L +A  +    +  G  P+ +TY+++I+  C+         +  +M++
Sbjct: 436 NFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKD 495

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI P V+ YN+L+    R   L  +  L  EM  +    DV S+N ++    + G    
Sbjct: 496 SGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKS 555

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M   DL P   TF+I++N   K    D A+ ++  +   G VP +V ++ L+K
Sbjct: 556 AKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLK 615

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNR 231
           G    G       +L ++ D     ++   +TI+ C C  +R
Sbjct: 616 GYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 182/363 (50%), Gaps = 4/363 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  ++ +A  +  + +  G+ PD+ TYN LI A C    +    T+LN M +
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
           + I PDVV++N+++    +   ++ + D++D+M++ G+ P+V +Y +LM  HCL  L + 
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL--LSEM 322

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           DEA +VF  M+C    P   ++N ++NG CK +  D A+ +F  + +   +P+ VTY+ L
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC   RL+ A  +  E+      PN +TY  ++    +NR     + +L A++    
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D       I    + G L+ A D    + + G+Q D+ +Y+ +IN  C+ G L+ A  
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM++ G   +   +  +  G  +      A   L+ M   GF ++       V  L 
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 562

Query: 369 KDG 371
            DG
Sbjct: 563 DDG 565



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 212/454 (46%), Gaps = 40/454 (8%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ P++ T ++LI+++C        +++L ++ + G  PD  T+ +LI G      +  
Sbjct: 90  FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGE 149

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  PDV +Y +L++ L ++G    A R+   M+  +  P    +N +++
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TYN LI  LC     +    +L E+ DS   P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +++ T++    +  K     +++  M ++G   +   Y  ++     +  + EA    
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   +++SYNTLIN YCK  +++ A  L  EM +Q    D  T++ LI GLC  
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389

Query: 336 GNIKGA-------------------RLHLEYMNK----------------IGFDSNLEAY 360
             ++ A                   R+ L+Y+ K                   D +++  
Sbjct: 390 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 449

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N  +D + + G+++ A ++F ++  K    D +TYS M++ LC+   L  ASKL     +
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 417 SGVRILKSAQKAVVDG-LRHSGCRREAKKIQSKI 449
           +G  +       +  G LR++   R  + +Q  +
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV 543



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 179/373 (47%), Gaps = 4/373 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +++N        F + D   +  NRM      P  V +N L+    +    S  L L  +
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   GIPP++++ + L++    L +   A  V   ++     P TATF  ++ G+     
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              AL +F  +   GF P++VTY  LI GLCK G    A  +L  +      PN   Y T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           I+    ++R+      + S M  KG + D F Y ++I A   +   K     + +MV   
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  D+VS+NT+++  CKEGK+  A+ ++D+M ++G E +  T+T L+DG C    +  A 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 398
              + M   G   N+ +YN +++   K  +ID A+ +F  M     + D+ TYS+++H L
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386

Query: 399 CKAKRLPSASKLL 411
           C  +RL  A  L 
Sbjct: 387 CHVERLQDAIALF 399



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PDVVTY  LI+  C+  +  A   +L  M +    P+V  YN++I    ++  ++ +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L  EM+  GI PD+++YNSL+H L  L +      +  +M+   + P   +FN +++ 
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK      A  +   + + G  P +VTY  L+ G C    +  A  +   +   G  PN
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            I+Y T++    + ++    + +   M R+    D   Y T+I     + RL++A     
Sbjct: 341 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 400

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV      ++V+Y  L++  CK   L  A  LL  +E    + D   + I IDG+C+AG
Sbjct: 401 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 460

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ AR     ++  G   ++  Y+ +++ L + G +D A  +F  M+      +   Y+
Sbjct: 461 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 520

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++     +      A +LL   +  G     S     V  L   G  +  K+I
Sbjct: 521 TITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 573



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   CK  ++ +A  ++   I+ GV P+VVTY  L+D +C     D    + + M 
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+V++YN+LI G  +   +  ++ L  EM    + PD  +Y++L+H L  + +  
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F +M+     P   T+ I+L+ LCKNRY   A+ + + ++     P++   NI I
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+C+AG L  AR +   L   G  P+  TY+ ++    R        ++   M   G T
Sbjct: 454 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 513

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +G  Y T+   F++      A   +++MV  G   D  +    + +   +G  ++   +
Sbjct: 514 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 573

Query: 310 LDE 312
           L E
Sbjct: 574 LRE 576



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+A  LE A  +  +    G+ PDV TY+++I+  C+    D    +   M E
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G + +   YN++  G  RN+  S ++ LL EM+  G   D  +    +  L   G    
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 569

Query: 131 ANRVFQDMI 139
             ++ ++ +
Sbjct: 570 LKQILREFV 578


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 190/374 (50%), Gaps = 6/374 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           VT+N++ID   +   FD  + IL  ++ + I     T++ LIA   ++ +   +++   +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M + G  PDV++YNS++H + Q      A  V+  M+  +  P  ATF I+LNGLCKN  
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
           TD+AL+MF  + + G  P  + Y I++ GLC+A R      +L  +  SG  P++IT   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +  +      +L   +++GY     GY ++I    +  R  E  ++  +M   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ D+V Y  LI  +C+ G ++ A  +L++M ++G   D Y +  LI G C  G +  AR
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 343 -LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
            L LE      F ++   Y  ++  + ++G +D A  +F  ME         T+++++  
Sbjct: 397 SLQLEISKNDCFPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455

Query: 398 LCKAKRLPSASKLL 411
           LCKA  L  A  L 
Sbjct: 456 LCKAGELEEARHLF 469



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 175/342 (51%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T+++LI AY +    +       +M++ G  PDV TYNS++    +  +   +L + ++M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           L++   P+  ++  L++ L + GK D+A ++F +M    + P T  + I+L+GLC+ + T
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+  R+   ++  G  P+ +T N L+ G CK G++  A  +L+     G+      Y+++
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +   FR ++Y    E    M + G   D   Y  +I  F ++G +  A + +  M   G+
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D   YN LI  +C  G L+ A  L  E+ K        T+TILI G+C+ G +  AR 
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
               M  +G   ++  +N ++D L K G+++ A ++F  ME+
Sbjct: 433 IFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI 474



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 194/420 (46%), Gaps = 13/420 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +  + K+   EKA          G  PDV TYN ++    Q   F     + N+M 
Sbjct: 134 FSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQML 193

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +   +P+  T+  L+ G  +N     +L + DEM + GIPP+   Y  ++  L Q  + D
Sbjct: 194 KLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTD 253

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           + +R+   M      P + T N +L+G CK    D A  + +  +K G+V  +  Y+ LI
Sbjct: 254 DVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLI 313

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL +A R    +   +++  +G  P+ + YT +++           L +L+ M ++G +
Sbjct: 314 DGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLS 373

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  +I  F  +G L +A     ++  +       +Y  LI   C+ G L+ A  +
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQI 433

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL-----EAYNCIV 364
            ++ME  G      T   LIDGLCKAG ++ AR HL Y  +IG + +L     +  + ++
Sbjct: 434 FNQMENLGCSPSIMTFNALIDGLCKAGELEEAR-HLFYKMEIGKNPSLFLRLSQGADRVM 492

Query: 365 DRLGKDGKIDHAINVFESME--VKDSFTYSSMVHNL-----CKAKRLPSASKLLLSCLKS 417
           D      ++D   + F  ++  VK+  T SS V+       C+  +L  A  L L  L+S
Sbjct: 493 DTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS 552



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 182/398 (45%), Gaps = 62/398 (15%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  ++++A A++    + G +  +  Y+ LID   +   +D       +M +AGI PD
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  LI G     ++  +L++L++M + G+ PD + YN+L+     +G  D+A  +  
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++   D  P + T+ I++ G+C+N   D A ++F  ++  G  P ++T+N LI GLCKAG
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAG 460

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  AR +  ++ + G  P+                  L L +     R   T +GF   
Sbjct: 461 ELEEARHLFYKM-EIGKNPS------------------LFLRLSQGADRVMDTANGFH-- 499

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL------ 310
                  ++ R ++A   ++QMV +G       Y  L+   C++GKL  A+ L       
Sbjct: 500 -------RVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS 552

Query: 311 ------------------DEMEK-------QGFECDKY---THTILIDGLCKAGNIKGAR 342
                              E+EK         F+ + +    +TI + GLC+A   + A 
Sbjct: 553 LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEAL 612

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
                + +   D N  +   +++ L KDG ++ A+++F
Sbjct: 613 KIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 650



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 190/437 (43%), Gaps = 22/437 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  + + A  +  +  + G+ P+ + Y +++   CQ    D  + +LN M+ +G  PD
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +T N+L+ G  +   +  +  LL    + G    +  Y+SL+  LF+  + DE     +
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P    + I++ G C+    D AL M   + + G  P+   YN LIKG C  G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  AR +  E+  +   P + TYT ++    RN       +I + M+  G +     + 
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 257 TVIAAFVKIGRLKEATDYMEQM-----------VTDGVQLDIVSYNTLINLYCKEGKLEA 305
            +I    K G L+EA     +M           ++ G    + + N     + +  + E 
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANG----FHRVDREED 506

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIV 364
           A+ +LD+M K G       +  L+   C+ G +  A  L L+Y+  +   S  +    + 
Sbjct: 507 AFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL--PSQEDETLKLA 564

Query: 365 DRLGKDGKIDHAINVFESMEVK-DSF---TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +   + G+++ A+     M  K ++F    Y+  +  LC+A+R   A K+ L   +  + 
Sbjct: 565 EEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMD 624

Query: 421 ILKSAQKAVVDGLRHSG 437
           +   +   +++GL   G
Sbjct: 625 VNPPSCVMLINGLCKDG 641



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 4/306 (1%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T N++++ L K+   D   ++   L+         T+++LI    K+G    A     +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + D G  P+  TY +I+    +   + L L + + M +  Y  +   +  ++    K G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             +A    ++M   G+  + + Y  +++  C+  + +  + LL+ M+  G   D  T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESM 383
           L+DG CK G I  A   L+   K G+   ++ Y+ ++D L +  + D        +F++ 
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D   Y+ ++   C+   +  A  +L    + G+        A++ G    G   +A+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 444 KIQSKI 449
            +Q +I
Sbjct: 397 SLQLEI 402



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 149/360 (41%), Gaps = 22/360 (6%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  I +  FC+   ++ A  ++ D  + G+ PD   YN LI  +C     D   ++   +
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +    P   TY  LI G  RN LL  +  + ++M  +G  P + ++N+L+  L + G+ 
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462

Query: 129 DEANRVFQDMICGD-----LTPCTATFNIM--LNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           +EA  +F  M  G      L        +M   NG  +    ++A R+   + K+G  P 
Sbjct: 463 EEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPS 522

Query: 182 LVTYNILIKGLCKAGRLRTA--RWI--LKELGDSGHAPNAITYT-TIMKCCFRNRKYKLG 236
              Y  L+   C+ G+L  A   W+  L+ L      P+    T  + +  F   + +  
Sbjct: 523 SAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL------PSQEDETLKLAEEHFEKGELEKA 576

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI--VSYNTLI 294
           +  L  M  K   F+   Y   +    +  R +EA      +V    Q+D+   S   LI
Sbjct: 577 VRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIF--LVLKECQMDVNPPSCVMLI 634

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CK+G LE A  +     ++GF         L+  L     +K A   L  MN  G+D
Sbjct: 635 NGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYD 694



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 131/323 (40%), Gaps = 10/323 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC    L+KA ++ ++  +    P   TY +LI   C+    D    I N+M  
Sbjct: 380 NALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMEN 439

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW-----SYNSLMHC---L 122
            G SP ++T+N+LI G  +   L  +  L  +M E+G  P ++       + +M      
Sbjct: 440 LGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGF 498

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            ++ + ++A RV   M+    TP +A +  ++   C+      A  ++    +     E 
Sbjct: 499 HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED 558

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            T  +  +   K G L  A   L E+    +      YT  +    + R+ +  L+I   
Sbjct: 559 ETLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLV 617

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +K      +      +I    K G L+ A D     +  G  L     N L+     + K
Sbjct: 618 LKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDK 677

Query: 303 LEAAYLLLDEMEKQGFECDKYTH 325
           ++ A  LL+ M   G++ D+Y H
Sbjct: 678 MKHALDLLNRMNSAGYDLDEYLH 700


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 206/453 (45%), Gaps = 40/453 (8%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDV 77
           A R +   A+  + ++LG+ P +VTYN L+D++ +    D    +L  M  R +G  P+ 
Sbjct: 215 AARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPND 274

Query: 78  VTYNSLIAGATR-------------------------NSLLSCSL---------DLLDEM 103
           VT+N +I G  R                         N L++  L         DL  EM
Sbjct: 275 VTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEM 334

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI P V +YN+++H L Q G+ + A   F +M    L P   T+N +LNG CK    
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSL 394

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +F  L+  G  P ++TYNILI G C+ G L  AR + +E+ + G  P+  TYT +
Sbjct: 395 KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           MK         +  E    M  KG   D F Y T I A + +G + +A    E M+ +G+
Sbjct: 455 MKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V+YN LI+  CK G L  A  L  +M   G + D  T+T LI   C+ G ++ AR 
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
             + M   G   +   Y   +    + G +  A   F  M  +    +  TY+ ++H LC
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  R   A +     L+ G+   K     ++DG
Sbjct: 635 RTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 1/330 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  L++A  +  D    G+ P V+TYN+LID YC+    +    +   M E G  PD
Sbjct: 388 YCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 447

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  L+ G+     L+ + +  DEML  G+ PD ++YN+ +     LG   +A R+ +
Sbjct: 448 VCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLRE 507

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++  T T+NI+++GLCK    ++A  +   +  +G  P+ +TY  LI   C+ G
Sbjct: 508 VMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERG 567

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            LR AR   K++   G AP+A+TYT  +    R             M  +G   +   Y 
Sbjct: 568 LLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A  + GR + A  +  +M+  G+  +  +Y  LI+  CKEG  E A     EM + 
Sbjct: 628 VLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQN 687

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           G   D  TH  L  G    G++  A  +LE
Sbjct: 688 GIHPDYLTHKALFKGF-DEGHMNHAIEYLE 716



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 169/373 (45%), Gaps = 35/373 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    ++ ++E A+   ++   +G+ PDV+TYN L++ YC+  S      +   +R 
Sbjct: 347 NAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG++P V+TYN LI G  R   L  +  L +EM+E G  PDV +Y  LM           
Sbjct: 407 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAM 466

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M+   L P    +N  +           A R+   +   G   + VTYNILI 
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G L  A+ +  ++  +G  P+ ITYT +                           
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCL--------------------------- 559

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                   I A  + G L+EA  + + M++DG+    V+Y   I+ YC+ G L +AY   
Sbjct: 560 --------IHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWF 611

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M ++G E ++ T+ +LI  LC+ G  + A  H   M + G   N   Y  ++D   K+
Sbjct: 612 RKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKE 671

Query: 371 GKIDHAINVFESM 383
           G  + A+  +  M
Sbjct: 672 GNWEDAMRFYFEM 684



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 167/369 (45%), Gaps = 7/369 (1%)

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
           AT ++  +  L    EM   G+ PDV   N ++  L    + D+   V  +M+   + P 
Sbjct: 177 ATPDTCSTLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPS 236

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTYNILIKGLCKAGRLRTARWI 204
             T+N +L+   K    D    + + ++  G   +P  VT+N++I GL + G L  A  +
Sbjct: 237 IVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEM 296

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           ++ +  S  A ++ TY  ++         K   ++   M+ +G       Y  +I   ++
Sbjct: 297 VEGMRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQ 355

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G+++ A     +M   G+Q D+++YN+L+N YCK G L+ A LL  ++   G      T
Sbjct: 356 SGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT 415

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           + ILIDG C+ G+++ AR   E M + G   ++  Y  ++        +  A   F+ M 
Sbjct: 416 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEML 475

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            K    D F Y++ +        +  A +L    +  G+         ++DGL  +G   
Sbjct: 476 SKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLN 535

Query: 441 EAKKIQSKI 449
           +AK +Q K+
Sbjct: 536 DAKDLQMKM 544



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 36/304 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN---- 66
           NI +  +C+   LE+A  +  + +  G LPDV TY +L+       S        +    
Sbjct: 417 NILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLS 476

Query: 67  ---------------------------RMREA----GISPDVVTYNSLIAGATRNSLLSC 95
                                      R+RE     GIS D VTYN LI G  +   L+ 
Sbjct: 477 KGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLND 536

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           + DL  +M+  G+ PD  +Y  L+H   + G   EA + F+DMI   L P   T+ + ++
Sbjct: 537 AKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIH 596

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C+     +A   FR + + G  P  +TYN+LI  LC+ GR + A     E+ + G  P
Sbjct: 597 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVP 656

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TYT ++    +   ++  +     M + G   D   +  +   F + G +  A +Y+
Sbjct: 657 NKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHAIEYL 715

Query: 276 EQMV 279
           E  V
Sbjct: 716 ENAV 719



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 98/185 (52%), Gaps = 7/185 (3%)

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCK 334
           +M+  G++  IV+YNTL++ + KEG+ +   +LL EME +G  C  +  TH ++I GL +
Sbjct: 227 EMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLAR 286

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
            G+++ A   +E M ++   ++   YN ++  L   G +  A ++   ME    +    T
Sbjct: 287 KGDLEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVT 345

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y++M+H L ++ ++ +A    +     G++       ++++G   +G  +EA  +   +R
Sbjct: 346 YNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLR 405

Query: 451 MAKIS 455
            A ++
Sbjct: 406 HAGLA 410


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 195/378 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +T + +I +  FCK   L+ A +++ +  +  + PD+ TY+ LIDA C+   ++   T
Sbjct: 210 KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I P+V T+NS+I G  +   +  + +++  M+E G+ PDV +YN ++    
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+ D A  +F  MI   + P   ++NI++NG  + +  D A+++ R + + G  P +V
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T N+L+ GL + GR ++A+    E+  +GH P+  T+ T++   F+N   +  +     +
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +R+    +   Y  VI    K G+L +A    E++   G+  D+++Y  +I+ YC+EG L
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  +L +ME  G   D  T+ +++ G  ++  +   +  LE +    F         +
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569

Query: 364 VDRLGKDGKIDHAINVFE 381
           +D + +D  + + I  F 
Sbjct: 570 MDIIAEDPSLLNMIPEFH 587



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 190/376 (50%), Gaps = 4/376 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ V Y  +++  C+       + +L  M +    P+   Y+ +I    ++ +L  +  L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM +  IPPD+++Y++L+  L +L + +    +F +MI  ++ P   TFN +++GLCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               ++A  + R + + G  P+++TYN++I G    G++  AR I   + +    PN I+
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIIS 355

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R +K    +++   + +KG          ++    ++GR K A ++ ++M+
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   D+ ++ TL+  Y K G +E A     ++E++  + +   +T +IDGLCK G + 
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A    E +  IG   ++  Y  ++    ++G +D A ++   ME    + D+ TY+ +V
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535

Query: 396 HNLCKAKRLPSASKLL 411
               ++ ++      L
Sbjct: 536 RGFLRSNKVSEMKAFL 551



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 181/381 (47%), Gaps = 9/381 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRL----GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
            CK    +KA     D +RL       P+   Y+++IDA+C+    D   ++LN M++  
Sbjct: 188 LCKKGHTQKA----FDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKS 243

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           I PD+ TY++LI    + S       L  EM+ + I P+V ++NS++  L + GK ++A 
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            + + MI   + P   T+N++++G       D A  +F  +      P +++YNILI G 
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGY 363

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            +  ++  A  + +E+   G  P+ +T   ++   F   + K        M   G+  D 
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           + +CT++  + K G ++EA  +  ++       +I  Y  +I+  CK GKL+ A+   ++
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +   G   D  T+T +I G C+ G +  A+  L  M   G  ++   YN IV    +  K
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNK 543

Query: 373 IDHAINVFESMEVKDSFTYSS 393
           +       E +  K SF++ +
Sbjct: 544 VSEMKAFLEEIAGK-SFSFEA 563



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 194/444 (43%), Gaps = 40/444 (9%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           ++++++ C     D G+++L    + GI  + V +N+L+ G    + +  ++ L  +++ 
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVR 170

Query: 106 MGI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             I  P+   Y ++M+ L + G   +A  + + M  G   P T  ++I+++  CK+   D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A  +   +++    P++ TY+ LI  LCK  +    R +  E+      PN  T+ +++
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  K +   EI+  M  KG   D   Y  +I  +   G++  A +  + M+   ++
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 285 LDIVSYNTLINLY------------CKE-----------------------GKLEAAYLL 309
            +I+SYN LIN Y            C+E                       G+ ++A   
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            DEM   G   D YTH  L+ G  K G ++ A  H   + +   D+N++ Y  ++D L K
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +GK+D A   FE + +     D  TY++M+   C+   L  A  +L     +G       
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              +V G   S    E K    +I
Sbjct: 531 YNVIVRGFLRSNKVSEMKAFLEEI 554



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 137/287 (47%), Gaps = 5/287 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A  +FR + +   +P +V+++ L+K L       +   + +E+       +    + +
Sbjct: 54  DDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +  C    +  LG  +L+   +KG  F+   + T++       ++K+A    +++V + +
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENI 173

Query: 284 -QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            + + V Y T++N  CK+G  + A+ LL  ME+   + +   ++I+ID  CK G + GA 
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 398
             L  M +     ++  Y+ ++D L K  + ++   +F  M   + +    T++S++  L
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           CK  ++  A +++   ++ GV         ++DG    G    A++I
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 195/389 (50%), Gaps = 4/389 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           ++ V+ DV ++ ++I   C+    +  + +L  +RE G SP+VV Y +LI G  +   + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + DL  EM + G+  + W+Y  L+H LF+ G   +   +++ M    + P   T+N ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N LCK+  T +A ++F  +++ G    +VTYN LI GLC+  +   A  ++ ++   G  
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN ITY T++      RK    L +   +K +G +     Y  +++ F K G    A   
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M   G++   V+Y  LI+ + +   +E A  L   ME+ G   D +T+++LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFT 390
            G +  A    + M +  F+ N   YN +V    K+G    A+ +F  ME K+      +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           Y  M+  LCK ++   A  L+   + SG+
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSGI 544



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 187/370 (50%), Gaps = 8/370 (2%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L++ C    CK   +EKA+ +  +  + G++ +  TY +LI    +      G+ +  
Sbjct: 202 TTLIDGC----CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M+E G+ P++ TYN ++    ++     +  + DEM E G+  ++ +YN+L+  L +  
Sbjct: 258 KMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EAN V   M    + P   T+N +++G C  R    AL + R L+  G  P LVTYN
Sbjct: 318 KANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           IL+ G CK G    A  ++KE+ + G  P+ +TYT ++    R+   +  +++ S+M+  
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEEL 437

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T D   Y  +I  F   GR+ EA+   + MV    + + V YNT++  YCKEG    A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRA 497

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EME++    +  ++  +I+ LCK    K A   +E M     DS +   + I++ 
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM----IDSGIGPSDSILNL 553

Query: 367 LGKDGKIDHA 376
           + +     H+
Sbjct: 554 ISRAKNDSHS 563



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 183/394 (46%), Gaps = 38/394 (9%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISP----------------------------- 75
           Y ++I+AY Q  S D+     N M + G  P                             
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 76  -----DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
                DV ++  +I G      +  S DLL E+ E G  P+V  Y +L+    + G+ ++
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M    L     T+ ++++GL KN        M+  +Q+HG  P L TYN ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK GR + A  +  E+ + G + N +TY T++    R  K     E++  MK  G   
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F  + +L +A      + + G+   +V+YN L++ +CK+G    A  ++
Sbjct: 337 NLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EME++G +  K T+TILID   ++ N++ A      M ++G   ++  Y+ ++      
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIK 456

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           G+++ A  +F+SM  K    +   Y++MV   CK
Sbjct: 457 GRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCK 490



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 160/340 (47%), Gaps = 5/340 (1%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y  +++   Q    D +   F +M+     P +  FN +L  +  +  + N    F    
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSS-SFNQWWCFFNES 155

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           K   V ++ ++ I+IKG C+AG +  +  +L EL + G +PN + YTT++  C +  + +
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++   M + G   + + Y  +I    K G  K+  +  E+M   GV  ++ +YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CK+G+ + A+ + DEM ++G  C+  T+  LI GLC+      A   ++ M   G +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            NL  YN ++D      K+  A+++   ++ +       TY+ +V   CK      A K+
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +    + G++  K     ++D    S    +A +++S + 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 216/420 (51%), Gaps = 11/420 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDG--IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ++L + +C   K N     EA++     + LG   + VTY +LI+  C+     A   +L
Sbjct: 127 KILKMGLCLNGKVN-----EALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVL 181

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            ++    ++ +VV Y+++I G  ++ L++ +  L  EM+   IPP V +++SL++    +
Sbjct: 182 RQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIV 241

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  +A R+F +M+  ++ P   TFNI+++ LCK      A  +   + K G  P +VTY
Sbjct: 242 GKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTY 301

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N L+ G C    +  A+ +L  +     APN+ +Y  ++    + +     L +   M  
Sbjct: 302 NTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCC 361

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G       Y ++I    K GR+  A + +++M  + +  DIV+YN+LI+++CK   ++ 
Sbjct: 362 RGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDK 421

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L+ ++++ G + +  T+ ILIDGLCK G +K A+   + +   G++ N   YN +++
Sbjct: 422 AIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMIN 481

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L K+G  D A  +   ME    + D+ TY +++  L        A KLL   +  GV +
Sbjct: 482 GLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVV 541



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 202/435 (46%), Gaps = 27/435 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTIL-----------NRMREA----------GISP 75
           GV PD+ T ++LI+ YC        +++             ++ EA          G   
Sbjct: 97  GVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHL 156

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VTY  LI G  +      +L +L ++    +  +V  Y++++  L +     +A  ++
Sbjct: 157 NHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLY 216

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI   + P   TF+ ++ G C      +A R+F  +      P+  T+NIL+  LCK 
Sbjct: 217 SEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           G+++ A+ ++  +   G  P  +TY T+M   C  N   K    +LS + R     +   
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGK-AKHVLSIISRMRVAPNSRS 335

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I  F KI  + EA     +M   G+    V+YN+LI+  CK G++  A+ L+DEM 
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
                 D  T+  LID  CK  ++  A   ++ + + G   N+  YN ++D L K G++ 
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLK 455

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           +A +VF+ + +K    +++TY+ M++ LCK      A  LL     +G+       + ++
Sbjct: 456 NAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETII 515

Query: 431 DGLRHSGCRREAKKI 445
             L H     +A+K+
Sbjct: 516 QALFHKDENEKAQKL 530



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 21/359 (5%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           D      NRMR+   +P +V +N ++     T+N   +  L L  +M   G+ PD+++ +
Sbjct: 48  DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTV-LSLSTQMESKGVKPDLFTLS 106

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            L++C   LG+   A  VF                I+  GLC N   + AL     +   
Sbjct: 107 ILINCYCHLGQMTFAFSVFA--------------KILKMGLCLNGKVNEALLFHDHVLAL 152

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           GF    VTY ILI GLCK G+ R A  +L+++       N + Y+TI+    +++     
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDA 212

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             + S M  K        + ++I  F  +G+ K+A     +MV   +  D  ++N L++ 
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDA 272

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CKEGK++ A  ++  M K+G E    T+  L+DG C    +  A+  L  ++++    N
Sbjct: 273 LCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPN 332

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
             +YN +++   K   +D A+ +F  M          TY+S++  LCKA R+P A +L+
Sbjct: 333 SRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 35/279 (12%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG---YTILN 66
            NI V   CK  ++++A+ +I   ++ GV P VVTYN L+D YC            +I++
Sbjct: 266 FNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIIS 325

Query: 67  RMREA--------------------------------GISPDVVTYNSLIAGATRNSLLS 94
           RMR A                                GI+P  VTYNSLI G  +   + 
Sbjct: 326 RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIP 385

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + +L+DEM    IP D+ +YNSL+    +    D+A  + + +    + P   T+NI++
Sbjct: 386 YAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILI 445

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLCK     NA  +F+ L   G+     TYNI+I GLCK G    A  +L ++ D+G  
Sbjct: 446 DGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGII 505

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           P+A+TY TI++  F   + +   ++L  M  KG     F
Sbjct: 506 PDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAF 544



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 121/238 (50%), Gaps = 4/238 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ++R  NI +  FCK   +++A  +  +    G+ P  VTYN LID  C+       + ++
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M    I  D+VTYNSLI    +N  +  ++ L+ ++ E GI P++ +YN L+  L + 
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A  VFQD++         T+NIM+NGLCK    D A  +   ++ +G +P+ VTY
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
             +I+ L        A+ +L+E+   G     + Y   ++     R   LG+ ++S +
Sbjct: 512 ETIIQALFHKDENEKAQKLLREMVIKG----VVVYAFEIRRTLVGRTLNLGMNLISLL 565



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 25/194 (12%)

Query: 277 QMVTDGVQLDIVSYNTLINLYCK---------------------EGKLEAAYLLLDEMEK 315
           QM + GV+ D+ + + LIN YC                       GK+  A L  D +  
Sbjct: 92  QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            GF  +  T+ ILI+GLCK G  + A   L  +     ++N+  Y+ I+D L KD  +  
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A  ++  M VK       T+SS+++  C   +   A +L    +   +         +VD
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 432 GLRHSGCRREAKKI 445
            L   G  +EAK +
Sbjct: 272 ALCKEGKIKEAKNV 285


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 221/513 (43%), Gaps = 78/513 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    KA   ++A  ++ + +    +P  VTY +L+++ C+  + +    +   M  
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G  P+ V Y SLI G  ++  +  +  L DEM+E G  PDV ++  ++  L + G  ++
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A + F++M+ G   P   T+  ++ GL K     NA R+ +G+  HG  P+ VTY  L+ 
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYT 249
           G CK GRL  A  +L EL     +PN   Y++++   C      K   ++    K    T
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAET 503

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK--EGKLEAAY 307
            D    C++I    K GRL EA    ++MV++G + D  +YN LIN  C+  E ++E A+
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 308 LLLDEMEK-----------------------------------QGFECDKYTHTILIDGL 332
            LL ++EK                                   +G+  D   +T L  GL
Sbjct: 564 ALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK----------------------- 369
           C  G +  A    + M + G   +  AY CI++ L K                       
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV 683

Query: 370 ------------DGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLL 412
                        G +D A + FESM  +         Y +++H  CKA ++ +A KL  
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +  G         ++ DGL  SG   +A+++
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 207/417 (49%), Gaps = 8/417 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI + +F +  R + A        R    PD+ T+ +L+D  C+    +  + + + M 
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + PD   + +++    +   +  + ++  +M + G PPD  +YN+++  L + G  
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA +V  +M+     P   T+ I++N LCK    + A  +FR +   GF P  V Y  L
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K+GR++ A  +  E+ ++G+ P+ IT+T ++    ++  ++   +    M R G 
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC 396

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T+I    KIGR+  A   M+ M+  G   D V+Y  L++ +CK G+L+ A  
Sbjct: 397 KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQ 456

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC-IVDRL 367
           LLDE++K     +   ++ L++GLC  G+++     L   +K   ++      C I+  L
Sbjct: 457 LLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGL 516

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK--RLPSASKLLLSCLKSG 418
            K G++D A  +F+ M  +    D+ TY+ +++ LC+++  R+  A  LL    K G
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 202/425 (47%), Gaps = 10/425 (2%)

Query: 28  AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           AI  + ++ G+ P+  ++N+LI ++ +    D   T    M+     PD+ T+  L+   
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 88  TRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
            +  +   + ++  EM+ MG +PPD   + +++  L +  +  EA  VF  M      P 
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
              +N M++GL K  +   AL++   +     VP  VTY IL+  LCKAG L  A  + +
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +  SG  PN++ YT+++    ++ + K    +   M   GY  D   +  +I    K G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
             ++A    E+M+  G + ++V+Y T+I    K G++  A+ ++  M   G   D  T+ 
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFE---- 381
            L+DG CK G +  A   L+ ++K     NL+ Y+ +V+ L   G ++  + ++FE    
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKA 499

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           + E  D     S++  LCK  RL  A ++    +  G +   +    +++GL    CR  
Sbjct: 500 AAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL----CRSR 555

Query: 442 AKKIQ 446
             +++
Sbjct: 556 ENRVE 560



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 40/347 (11%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G   DV++YN LM+ L       +   + ++M+   + P T +FNI++    + R  D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAG---------------------------- 196
           +A+  F  +++    P+L T+ IL+  LCKAG                            
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 197 --------RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
                   R++ AR +  ++   G  P+AI Y T++    +    +  L++L  M  K  
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  ++ +  K G L+ A +    M   G + + V Y +LI+ + K G+++ A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L DEM + G+  D  THT++IDGLCK+GN + A    E M + G   N+  Y  I+  L 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 369 KDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           K G++ +A  + + M       DS TY  ++   CK  RL  A++LL
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 175/390 (44%), Gaps = 39/390 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+  A  I+   I  G  PD VTY  L+D +C+    D    +L+ + +   SP++ 
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLGKPDEANRVFQD 137
            Y+SL+ G      +  +LD L E  +      D     S++  L + G+ DEA R+FQ 
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQR 531

Query: 138 MICGDLTPCTATFNIMLNGLCKNR--YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           M+     P   T+NI++NGLC++R    + A  +   L+K G++P+ VTY  L  GLCK 
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A  +L+E    G   + + YT +        +    + +   M R+G   D   Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY------------------------- 290
           C +I   +K+ +L++A  + ++M+  G +  + +Y                         
Sbjct: 652 CCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLA 711

Query: 291 -----------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                      + LI+ +CK  K++AA  L ++M  +G      T   L DGL ++G  +
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            A+  L+ M   G   +   +  I+D L K
Sbjct: 772 KAQELLQEMAAGGSPPHAATFTAILDGLRK 801



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%), Gaps = 3/240 (1%)

Query: 11  NICVCTFCKA--NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           NI +   C++  NR+E+A A++ D  ++G LPD VTY  L    C+    D    +L   
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G + DVV Y +L  G      +  ++ L  EM+  G  PD  +Y  +++ L ++ K 
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKL 664

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 187
           ++A + F +MI     P  AT+  ++  LC     D A   F  +   G  V  ++ Y+ 
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDA 724

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CKA ++  A  + +++   G+ P A+T  ++     R+ K +   E+L  M   G
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 1/209 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   +++A  ++ +    G   DVV Y  L    C     D   ++   M   G +PD
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y  +I G  +   L  +    DEM+  G  P V +Y +L+  L   G  DEA   F+
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707

Query: 137 DMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M+  G+L      ++ +++G CK    D AL++F  +   G VP  VT   L  GL ++
Sbjct: 708 SMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIM 224
           G+   A+ +L+E+   G  P+A T+T I+
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 45/260 (17%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A ++ G+  D F Y  ++   V      +     E+M+  G+  +  S+N LI  + +  
Sbjct: 109 AGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------- 336
           + + A    + M+++  + D +T  IL+D LCKAG                         
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 337 -----------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
                       +K AR     M K GF  +  AYN ++D L K G    A+ V ++M  
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           K       TY  +V++LCKA  L  A +L      SG R       +++ G   SG  +E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 442 A-----KKIQSKIRMAKISH 456
           A     + +++  R   I+H
Sbjct: 349 ACSLFDEMVEAGYRPDVITH 368



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 4/158 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISPDV 77
           K  +LE A     + I  G  P V TY  L+ A C   + D  +     M   G +   V
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSV 719

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           + Y++LI G  +   +  +L L ++M+  G  P   +  SL   L + GK ++A  + Q+
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           M  G   P  ATF  +L+GL   R +D + ++ + +Q+
Sbjct: 780 MAAGGSPPHAATFTAILDGL---RKSDESGKLLKLVQE 814



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 2/184 (1%)

Query: 14  VCT-FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           +CT  C   ++++A ++  + +R G  PD   Y  +I+   +    +      + M   G
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEA 131
             P V TY +L+        +  +    + ML  G +   V  Y++L+H   +  K D A
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAA 738

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++F+DMI     P   T   + +GL ++  T+ A  + + +   G  P   T+  ++ G
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798

Query: 192 LCKA 195
           L K+
Sbjct: 799 LRKS 802


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 212/408 (51%), Gaps = 11/408 (2%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           S    Y +L+RM+  G SPD+VTYN LI       +L  +L+  +++L+    P V +Y 
Sbjct: 104 SIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYT 163

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            L+      G  DEA ++  +M   +L P    +N ++  +C+  Y D A  +   +   
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSK 222

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G+  +++TYNIL++ L   G+      ++ ++   G   N +TY+ ++    R+ K + G
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           + +L  MK+KG   DG+ Y  +IA   K GR+  A + ++ M++DG   DIV+YNT++  
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDS 355
            CK+ + + A  + +++ + G   +  ++  +   L  +G+ ++   + LE ++ +  D 
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXV--DP 400

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSASK 409
           ++ AYN ++  L +DG +D AI +   ME++ S       +Y+ ++  LC+  R+  A++
Sbjct: 401 DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATE 460

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 456
           +L + +  G    ++    +++G+   G   +A+ + +  + M  IS 
Sbjct: 461 VLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISE 508



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 40/403 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD+VTYN+LI + C      A     N++ +   +P VVTY  LI        +  +
Sbjct: 119 GFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEA 178

Query: 97  LDLLDEMLEMGIPPDVWSYNS----------------------------------LMHCL 122
           + LLDEM E+ + PDV+ YNS                                  L+  L
Sbjct: 179 IKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSKGYALDVITYNILLRSL 238

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              GK +    +  DM+         T++++++ LC++   +  + + + ++K G  P+ 
Sbjct: 239 XNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDG 298

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             Y+ LI  LCK GR+  A  +L  +   G  P+ + Y TI+ C  + ++    L I   
Sbjct: 299 YCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEK 358

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   G + +   Y TV +A    G    A   + +M+ D V  D+++YN+LI+  C++G 
Sbjct: 359 LGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEML-DXVDPDVIAYNSLISCLCRDGM 417

Query: 303 LEAAYLLLDEMEKQGFECDK--YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           ++ A  LL +ME +  EC     ++ I++ GLC+ G +  A   L  M   G   N   Y
Sbjct: 418 VDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTY 477

Query: 361 NCIVDRLGKDGKIDHAINV---FESMEVKDSFTYSSMVHNLCK 400
             +++ +G  G ++ A ++     +M+     ++  +    CK
Sbjct: 478 TFLIEGIGFGGWLNDARDLATTLVNMDAISEHSFERLYKTFCK 520



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 3/283 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C+   +++A  +I      G   DV+TYN+L+ +      ++AG+ +++ M   G 
Sbjct: 200 IIXMCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGC 259

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             +VVTY+ LI+   R+  +   + LL +M + G+ PD + Y+ L+  L + G+ D A  
Sbjct: 260 EANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIE 319

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   MI     P    +N +L  LCK +  D AL +F  L + G  P   +YN +   L 
Sbjct: 320 VLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALG 379

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG- 252
            +G    A  ++ E+ D    P+ I Y +++ C  R+      +E+L  M+ +       
Sbjct: 380 SSGHKVRALGMILEMLDXVD-PDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPS 438

Query: 253 -FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              Y  V+    ++GR+ +AT+ +  MV  G   +  +Y  LI
Sbjct: 439 VVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLI 481



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 9/290 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + +     + E    ++ D +  G   +VVTY++LI + C+    + G  +L  M++
Sbjct: 232 NILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKK 291

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD   Y+ LIA   +   +  ++++LD M+  G  PD+ +YN+++ CL +  + DE
Sbjct: 292 KGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADE 351

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILI 189
           A  +F+ +     +P  +++N + + L  + +   AL M   L+    V P+++ YN LI
Sbjct: 352 ALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMI--LEMLDXVDPDVIAYNSLI 409

Query: 190 KGLCKAGRLRTARWIL--KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
             LC+ G +  A  +L   E+  S   P+ ++Y  ++    R  +     E+L+AM  KG
Sbjct: 410 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKG 469

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
              +   Y  +I      G L +A D    + T  V +D +S ++   LY
Sbjct: 470 CLPNETTYTFLIEGIGFGGWLNDARD----LATTLVNMDAISEHSFERLY 515


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 219/453 (48%), Gaps = 7/453 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR  N  +  F K  + +  +    D I  G  P V TYN++ID  C+    +A   +  
Sbjct: 227 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+ PD VTYNS+I G  +   L  ++   +EM +M   PDV +YN+L++C  + G
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K       +++M    L P   +++ +++  CK      A++ +  +++ G VP   TY 
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI   CK G L  A  +  E+   G   N +TYT ++       + K   E+   M   
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I  FVK   +  A + + ++   G++ D++ Y T I   C   K+EAA
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            ++++EM++ G + +   +T L+D   K+GN       L+ M ++  +  +  +  ++D 
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586

Query: 367 LGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           L K+  +  A++ F  +        ++  +++M+  LCK  ++ +A+ L    ++ G+  
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            ++A  +++DG    G   EA  ++ K  MA+I
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDK--MAEI 677



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 184/374 (49%), Gaps = 1/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  +L        +    G+ P+VV+Y+ L+DA+C+             MR 
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY SLI    +   LS +  L +EML++G+  +V +Y +L+  L    +  E
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    + P  A++N +++G  K +  D AL +   L+  G  P+L+ Y   I 
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   ++  A+ ++ E+ + G   N++ YTT+M   F++     GL +L  MK      
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               +C +I    K   + +A DY  ++  D G+Q +   +  +I+  CK+ ++EAA  L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            ++M ++G   D+  +T L+DG  K GN+  A    + M +IG   +L AY  +V  L  
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695

Query: 370 DGKIDHAINVFESM 383
             ++  A +  E M
Sbjct: 696 CNQLQKARSFLEEM 709



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 4/385 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +L  ++    +M    + P   S N L+H   +LGK D+  R 
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DMI     P   T+NIM++ +CK    + A  +F  ++  G VP+ VTYN +I G  K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL       +E+ D    P+ ITY  ++ C  +  K  +GLE    MK  G   +   
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++ AF K G +++A  +   M   G+  +  +Y +LI+  CK G L  A+ L +EM 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G E +  T+T LIDGLC A  +K A      M+  G   NL +YN ++    K   +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+ +   ++ +    D   Y + +  LC  +++ +A  ++    + G++        ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
           D    SG   E   +  +++   I 
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIE 574



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 1/272 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C A R+++AE +       GV+P++ +YN LI  + +  + D    +LN ++  GI PD+
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           + Y + I G      +  +  +++EM E GI  +   Y +LM   F+ G P E   +  +
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKAG 196
           M   D+     TF ++++GLCKN+    A+  F R     G       +  +I GLCK  
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  + +++   G  P+   YT++M   F+       L +   M   G   D   Y 
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +++       +L++A  ++E+M+ +G+  D V
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 54/372 (14%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-------------------- 142
           M   G    V SY  + H LF      +AN V ++M+                       
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192

Query: 143 ------------------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
                                         + P T + N +L+   K   TD+  R F+ 
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +   G  P + TYNI+I  +CK G +  AR + +E+   G  P+ +TY +++    +  +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               +     MK      D   Y  +I  F K G+L    ++  +M  +G++ ++VSY+T
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           L++ +CKEG ++ A     +M + G   ++YT+T LID  CK GN+  A      M ++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
            + N+  Y  ++D L    ++  A  +F  M+    + +  +Y++++H   KAK +  A 
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492

Query: 409 KLLLSCLKSGVR 420
           +LL      G++
Sbjct: 493 ELLNELKGRGIK 504


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 225/479 (46%), Gaps = 39/479 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI V   CK  +L+     + +    GV  D+VTYN L++AYC+       + +++ M 
Sbjct: 227 LNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMA 286

Query: 70  EAGISPDVVTYNSLIAG--------------------------ATRNSLL--SCSLD--- 98
             G+ P + TYN+LI G                          AT N +L  SC  +   
Sbjct: 287 GKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVW 346

Query: 99  ----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
               + +EML+ G+ PD+ S++S++    + G+   A   F+ M    L P T  + I++
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG C+N     AL+M   + + G V ++VTYN L+ GLC+   L  A  + KE+ + G  
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  T TT++    ++      L +   M  +    D   Y T++  F K+G +++A + 
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              M++  +    +S++ LIN +C  G +  A+ L DEM+++G +    T   +I G  +
Sbjct: 527 WYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AGN+  A   L  M   G   +   YN +++   K+   D A  +  +ME    + +  T
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y++++    +  R+  A  +L   +  G+   KS   ++++G       +EA ++  ++
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 164/315 (52%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T +  I +  +C+ + +  A  +  + +  G + DVVTYN L++  C+    D    +  
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK 458

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M E G+ PD  T  +LI G  ++  ++ +L L + M    + PDV +YN+LM    ++G
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + ++A  ++ DMI  ++ P   +F+I++NG C       A R++  +++ G  P LVT N
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +IKG  +AG L  A   L  +   G  P+ ITY T++    +   +     +++ M+ +
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  ++  F + GR++EA   + +M+  G+  D  +Y +LIN Y  +  ++ A
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698

Query: 307 YLLLDEMEKQGFECD 321
           + + DEM ++GF  D
Sbjct: 699 FRVHDEMLQRGFVPD 713



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 207/414 (50%), Gaps = 6/414 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K   ++ A  +  D ++ G + +V T N++++A C+    D     L+ M E
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  D+VTYN+L+    R  L+S +  L+D M   G+ P +++YN+L++ L + G  + 
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 312

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV  +M+   L P  ATFN ML   C+      A R+F  + + G VP+L++++ ++ 
Sbjct: 313 AKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              + G L  A    +++   G  P+ + YT ++    RN      L++ + M  +G   
Sbjct: 373 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 432

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T++    +   L +A +  ++MV  GV  D  +  TLI+ YCK+G +  A  L 
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           + M  +  + D  T+  L+DG CK G ++ A+ L  + +++  F S + +++ +++    
Sbjct: 493 ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYI-SFSILINGFCS 551

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            G +  A  +++ M+ K       T ++++    +A  L  A+  L + +  GV
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGV 605



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 170/341 (49%), Gaps = 2/341 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V  F +   L +A A       +G++PD V Y +LI+ YC+         + N M E G 
Sbjct: 371 VGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGC 430

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             DVVTYN+L+ G  R  +L  + +L  EM+E G+ PD ++  +L+H   + G   +A  
Sbjct: 431 VMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALS 490

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F+ M    L P   T+N +++G CK    + A  ++  +      P  ++++ILI G C
Sbjct: 491 LFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFC 550

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G +  A  +  E+ + G  P  +T  TI+K   R        + L+ M  +G   D  
Sbjct: 551 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 610

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I +FVK      A   +  M   G+  ++V+YN ++  + + G+++ A ++L +M
Sbjct: 611 TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 670

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGF 353
             +G   DK T+T LI+G     N+K A R+H E + + GF
Sbjct: 671 IDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQR-GF 710



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 184/413 (44%), Gaps = 4/413 (0%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           VV +++LI  Y Q      G      +R+ G    +   N+L+    +   +  +  + +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           + ++ G   +V++ N +++ L + GK D       +M    +     T+N ++N  C+  
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A  +   +   G  P L TYN LI GLCK G    A+ +L E+   G  PNA T+ 
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    R         + + M ++G   D   + +++  F + G L  A  Y E+M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  D V Y  LIN YC+   +  A  + +EM ++G   D  T+  L++GLC+   +  A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
               + M + G   +      ++    KDG +  A+++FE+M ++    D  TY++++  
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            CK   +  A +L    +   +     +   +++G    G   EA ++  +++
Sbjct: 514 FCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 198/414 (47%), Gaps = 3/414 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           N  +  +C  NR+E A  +I      G  PD V+Y  ++   C+    +    ++ +M  
Sbjct: 309 NSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVW 368

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            + + PD VTYN+LI   +++     +L  L E  + G   D   Y++++H   Q G+ D
Sbjct: 369 NSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMD 428

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +  DM      P   T+  +++G C+    D A ++ + + KHG  P  V+Y  L+
Sbjct: 429 EAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALL 488

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC +G+   AR ++    +    PNAITY  +M    R  K     ++   M  KG+ 
Sbjct: 489 NGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFF 548

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                   +I +  +  ++ EA  Y+E+ +  G  +++V++ T+I+ +C+ G +EAA  +
Sbjct: 549 PTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSV 608

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LD+M   G   D  T+T L D L K G +  A   +  M   G D     Y  ++ R  +
Sbjct: 609 LDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQ 668

Query: 370 DGKIDHAINVFESMEVKDSF--TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            G++D  +N+ E M  +  F   Y+ ++  LC    L  A KLL   L++  ++
Sbjct: 669 WGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKV 722



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 183/384 (47%), Gaps = 5/384 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           V Y  ++D   +         +L  M   GI      +  ++   +R   L  +L +L  
Sbjct: 201 VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTL 260

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M + G+ P +   N+ ++ L + GK ++A +  + M    + P   T+N ++ G C    
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYT 221
            ++AL +  GL   G  P+ V+Y  ++  LCK  ++   + +++++  +S   P+ +TY 
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    ++      L  L   + KG+  D  GY  ++ +F + GR+ EA   +  M + 
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G   D+V+Y  +++ +C+ G+++ A  +L +M K G + +  ++T L++GLC +G    A
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHN 397
           R  +    +  +  N   Y  ++  L ++GK+  A ++   M  K  F        ++ +
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560

Query: 398 LCKAKRLPSASKLLLSCLKSGVRI 421
           LC+ +++  A K L  CL  G  I
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAI 584



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 173/366 (47%), Gaps = 2/366 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V +FC+  R+++A++++ID    G  PDVVTY  ++D +C+    D    IL +M + G 
Sbjct: 418 VHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGC 477

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ V+Y +L+ G   +     + ++++   E    P+  +Y ++MH L + GK  EA  
Sbjct: 478 KPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACD 537

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M+     P     N+++  LC+N+    A +        G    +V +  +I G C
Sbjct: 538 LTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFC 597

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           + G +  A  +L ++  SG  P+A+TYT +     +  +     E++  M  KG      
Sbjct: 598 QIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV 657

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y +VI  + + GR+ +  + +E+M+    Q     YN +I   C  G LE A  LL ++
Sbjct: 658 TYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKV 715

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            +   + D  T  +L++   K G    A      M +     +L+    +  +L  DGK+
Sbjct: 716 LRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKL 775

Query: 374 DHAINV 379
             A N+
Sbjct: 776 VEADNL 781



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 5/302 (1%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +  ML+ L K +    A R+ R + + G       +  ++    +AG+LR A  +L  +
Sbjct: 202 VYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLM 261

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             +G  P+     T +    +  K +  L+ L  M+  G   D   Y ++I  +  + R+
Sbjct: 262 QKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRI 321

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTI 327
           ++A + +  + + G   D VSY T++   CKE K+E    L+++M        D+ T+  
Sbjct: 322 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNT 381

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           LI  L K G+   A   L+     GF  +   Y+ IV    + G++D A ++   M  + 
Sbjct: 382 LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D  TY+++V   C+  R+  A K+L    K G +    +  A+++GL HSG   EA+
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 501

Query: 444 KI 445
           ++
Sbjct: 502 EM 503



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 52/283 (18%)

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYCTVIAAFVKIGRLK 269
            H P  + Y T++    + +  +    +L  M R+G     + FGY  V+ ++ + G+L+
Sbjct: 197 SHHP--VVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGY--VMVSYSRAGKLR 252

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A   +  M   GV+  +   NT I +  K GKLE A   L+ M+  G + D  T+  LI
Sbjct: 253 NALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLI 312

Query: 330 DGLCKAGNIKGARLHLE-----------------------------------YMNKIGFD 354
            G C    I+ A   LE                                    M K+ ++
Sbjct: 313 KGYCDLNRIEDA---LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWN 369

Query: 355 SNL----EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
           SNL      YN ++  L K G  D A+   +  + K    D   YS++VH+ C+  R+  
Sbjct: 370 SNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDE 429

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           A  L++     G         A+VDG    G   EAKKI  ++
Sbjct: 430 AKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQM 472



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 39/276 (14%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ + + C+  ++ +A+  + + +  G   +VV +  +I  +CQ    +A  ++L+ M 
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G  PD VTY +L     +   L  + +L+ +ML  G+ P   +Y S++H   Q G+ D
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVD 673

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +                      MLN L K             L++  F      YN +I
Sbjct: 674 D----------------------MLNLLEKM------------LKRQPF---RTVYNQVI 696

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           + LC  G L  A  +L ++  +    +A T   +M+   +        ++   M R+  T
Sbjct: 697 EKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLT 756

Query: 250 FDGFGYCTVIA-AFVKIGRLKEATDYMEQMVTDGVQ 284
            D    C  ++   V  G+L EA + M + V  G+Q
Sbjct: 757 PD-LKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQ 791


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 224/446 (50%), Gaps = 12/446 (2%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +N+ V T     +C    L  A  ++ +    G++P+ VTY++LID  C+  + +  +  
Sbjct: 143 MNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEF 202

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M+  GI   V + NS++ G  +      +  + ++ LE G+  +V+++N+L+  L +
Sbjct: 203 YSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCK 261

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK +EA  ++ ++I   ++P   ++N ++ G C+    + A ++++ +  +GF P  VT
Sbjct: 262 EGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT 321

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAM 243
           + IL+ G  K G +  A  I   + D+   P   T   I+K  C   R ++ G ++ +  
Sbjct: 322 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE-GRDLFNKF 380

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G+      Y T+I  F+K G +  A++   +M   G+    V+Y +LI+ +CK   +
Sbjct: 381 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 440

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LL++M+++G + D   +  LIDG CK  ++K A   L  +   G   N   YN +
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +        ++ AI++++ M  +    D  TY+S++  L K+ RL  AS +    L  G+
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 560

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
                A   +++GL + G    A+KI
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKI 586



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 196/426 (46%), Gaps = 40/426 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +  + K    + A  +  D +  G L +V T+N L+   C+    +    + + + 
Sbjct: 218 LNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVI 276

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GISP+VV+YN++I G  R   ++ +  +  EML+ G  P+  ++  LM   F+ G  +
Sbjct: 277 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 336

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F  M   ++ P   T  I++ GLCK   +     +F      GFVP  + YN +I
Sbjct: 337 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 396

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K G +  A  + +E+ + G  P+ +TYT+++    +     L L++L+ MKRKG  
Sbjct: 397 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 250 FDGFGYCTVIAAFVK-----------------------------------IGRLKEATDY 274
            D   Y T+I  F K                                   +  ++EA D 
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++MV +G+  D+ +Y +LI+   K G+L  A  +  EM  +G   D   HT+LI+GLC 
Sbjct: 517 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 576

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G  + AR  LE MN      ++  YN ++    K+G +  A  + + M     V D+ T
Sbjct: 577 KGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNIT 636

Query: 391 YSSMVH 396
           Y  +V+
Sbjct: 637 YDILVN 642



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 195/447 (43%), Gaps = 9/447 (2%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T ++  CV    K   + +A  +  D +  G   ++     L+  YC   +  +   ++N
Sbjct: 114 TSVITACV----KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVN 169

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            + E+G+ P+ VTY+ LI G  +N  +  + +   EM   GI   V+S NS++    +  
Sbjct: 170 EISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 229

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               A  +F D +   L     TFN +L+ LCK    + A  ++  +   G  P +V+YN
Sbjct: 230 SWQNAFTMFNDALESGLAN-VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 288

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I G C+   +  A  + KE+ D+G  PNA+T+T +M   F+    +    I   MK  
Sbjct: 289 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 348

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                      +I    K GR  E  D   + V+ G     + YNT+I+ + KEG +  A
Sbjct: 349 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +  EM + G      T+T LIDG CK  NI  A   L  M + G   +++AY  ++D 
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDG 468

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K   +  A  +   +       + F Y+SM+        +  A  L    +  G+   
Sbjct: 469 FCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCD 528

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                +++DGL  SG    A  I +++
Sbjct: 529 LKTYTSLIDGLLKSGRLLYASDIHTEM 555



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 204/490 (41%), Gaps = 75/490 (15%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +   N+L+ A  +         + N+M   G++ D  T + ++    +   +  +   
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +    G+  D  +Y+  +H L        A  + ++M      P   TF  ++    K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 ALR+   +   G    L     L+KG C  G LR+A  ++ E+ +SG  PN +T
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDG---------------------- 252
           Y+ ++  C +N   +   E  S MK KG     Y+ +                       
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 253 -------FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                  F + T+++   K G++ EA +  ++++  G+  ++VSYN +I  +C++  + A
Sbjct: 243 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 306 AYLLLDEMEKQGFECDKYTHTILID----------------------------------- 330
           A  +  EM   GF  +  T TIL+D                                   
Sbjct: 303 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 362

Query: 331 GLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV--- 385
           GLCKAG + +G  L  +++++ GF      YN I+D   K+G I+ A NV+  M EV   
Sbjct: 363 GLCKAGRSFEGRDLFNKFVSQ-GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 421

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             + TY+S++   CK   +  A KLL    + G+++   A   ++DG       + A ++
Sbjct: 422 PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 481

Query: 446 QSKIRMAKIS 455
            +++R A +S
Sbjct: 482 LNELRGAGLS 491



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 113/213 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N ++ A  ++ D  R G+  D+  Y  LID +C+     + + +LN +R AG+SP+
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 493

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              YNS+I G    + +  ++DL  +M+  GIP D+ +Y SL+  L + G+   A+ +  
Sbjct: 494 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 553

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P      +++NGLC     +NA ++   +     +P ++ YN LI G  K G
Sbjct: 554 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 613

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            L+ A  +  E+ D G  P+ ITY  ++   F+
Sbjct: 614 NLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 7/282 (2%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           +TP     NI+L  + +   T  A  +   +   G   +  T +++++   K G +  A 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 203 WILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
               +    G   +   Y+  +   C   N  Y L L  L  M+  G+      + +VI 
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSL--LREMRAAGWIPPEGTFTSVIT 118

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           A VK G + EA    + MV  G  +++    +L+  YC +G L +A +L++E+ + G   
Sbjct: 119 ACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVP 178

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +K T+++LIDG CK GNI+ A      M   G  S++ + N I++   K     +A  +F
Sbjct: 179 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 238

Query: 381 -ESME--VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +++E  + + FT+++++  LCK  ++  A  L    +  G+
Sbjct: 239 NDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 206/406 (50%), Gaps = 4/406 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   ++ +A     D I  G   D V+Y  LI+  C+     A   +L ++    + P+
Sbjct: 144 LCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPN 203

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN++I    ++ L+  + DL  EM+   I PDV +Y +L++    +G+  EA  +F 
Sbjct: 204 VVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFN 263

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  ++ P   TFNI+++GLCK      A  +   + K G    +VTYN L+ G     
Sbjct: 264 QMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVK 323

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A ++   +   G  P+  +Y+ ++    + +     + +   M  K    +   Y 
Sbjct: 324 QENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYN 383

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I   +K GR+ +A D + +M   G   D+++Y++L++  CK  +++ A  L+ +++ Q
Sbjct: 384 SLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQ 443

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + + YT+TIL+DGLCK G +K A+   + +   G+  +++ YN +V+ L K+G  D A
Sbjct: 444 GIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEA 503

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++   ME    + D+ TY ++V  L +  +   A KLL   +  G
Sbjct: 504 LSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 165/324 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   +  A  +  + I   + PDVVTY  LI              + N+M
Sbjct: 206 MYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQM 265

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               I PDV T+N L+ G  +   +  + ++L  M++ G+  ++ +YNSLM   F + + 
Sbjct: 266 LLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQE 325

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  VF  M    +TP   +++IM+NGLCK +  D A+ +F+ +      P  VTYN L
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GL K GR+  A  ++ E+ + G   + ITY++++    +N +    + +++ +K +G 
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + + Y  ++    K GRLK+A    + ++  G  LD+  YN ++N  CKEG  + A  
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505

Query: 309 LLDEMEKQGFECDKYTHTILIDGL 332
           L+ +ME  G   D  T+  L+  L
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRAL 529



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 195/416 (46%), Gaps = 5/416 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R  V P +  +N ++ +  +   F    +   +M    I PD+ T+N LI        L
Sbjct: 57  MRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHL 115

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + +  +L ++ ++G  PD  +  +L+  L   GK  EA     D+I         ++  +
Sbjct: 116 NFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTL 175

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NGLCK   T  AL++ R +      P +V YN +I  LCK   +  A  +  E+     
Sbjct: 176 INGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TYTT++  C    + K  + + + M  K    D + +  ++    K G +K+A +
Sbjct: 236 FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARN 295

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  M+  GV  +IV+YN+L++ Y    +   A  + + M ++G   D  +++I+I+GLC
Sbjct: 296 VLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLC 355

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
           K   +  A    + M+      N   YN ++D L K G+I  A ++   M    +  D  
Sbjct: 356 KTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVI 415

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           TYSS++  LCK  ++  A  L+      G++        +VDGL  +G  ++A+ +
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAV 471



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 1/289 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V   CK   ++KA  ++   I+ GV  ++VTYN L+D Y      +    + N M 
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++PDV +Y+ +I G  +  ++  +++L  EM    + P+  +YNSL+  L + G+  
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M          T++ +L+ LCKN   D A+ +   ++  G  P + TY IL+
Sbjct: 397 DAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK GRL+ A+ + ++L   G+  +   Y  ++    +   +   L ++S M+  G  
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLY 297
            D   Y T++ A  +  +  +A   + +M+  G  +   +S N+++ +Y
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSMLCVY 565



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 35/211 (16%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+  A  ++ +    G   DV+TY+ L+DA C+    D   T++ ++++ GI P++ 
Sbjct: 391 KYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIY 450

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY  L+ G  +N                                   G+  +A  V+QD+
Sbjct: 451 TYTILVDGLCKN-----------------------------------GRLKDAQAVYQDL 475

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +          +N+M+NGLCK    D AL +   ++ +G +P+ VTY  L++ L +  + 
Sbjct: 476 LIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKN 535

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFR 229
             A  +L+E+   G A  +   +  M C ++
Sbjct: 536 DKAVKLLREMIVQGSAVGSNISSNSMLCVYQ 566


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 174/323 (53%), Gaps = 4/323 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   + +A  +  + +  G+ PDVVTY+ LI  +C     +    + N+M
Sbjct: 198 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM 257

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLG 126
               I+PDV T++ L+ G  +   +  + ++L  M++ GI PDV +Y SLM  +CL +  
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK-- 315

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + ++A  +F  M  G +T    ++NIM+NG CK +  D A+ +F+ +     +P++VTYN
Sbjct: 316 QVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYN 375

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK+G++  A  ++ E+ D G   + ITY +I+    +N +    + +L+ MK +
Sbjct: 376 SLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 435

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D + Y  +I    K GRLK+A +  E ++  G  + + +Y  +I  +C     + A
Sbjct: 436 GIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKA 495

Query: 307 YLLLDEMEKQGFECDKYTHTILI 329
             LL +ME  G   +  T+ I+I
Sbjct: 496 LALLSKMEDNGCIPNAKTYEIII 518



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 194/390 (49%), Gaps = 4/390 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + LG   + V Y  LI+  C+     A   +L R+    + P+VV YN++I    +  L+
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + + DL  EM+  GI PDV +Y++L+     LGK ++A  +F  MI  ++ P   TF+I+
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G CK      A  +   + K G  P++VTY  L+ G C   ++  A+ I   +   G 
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
             N  +Y  ++    + +K    + +   M  K    D   Y ++I    K G++  A  
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +++M   GV  D ++YN++++  CK  +++ A  LL +M+ +G + D YT+TILIDGLC
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K G +K A+   E +   G++  +  Y  ++     +   D A+ +   ME    + ++ 
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY  ++ +L +      A KLL   +  G+
Sbjct: 513 TYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 203/418 (48%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+VT+N+LI+ + Q       +++   + + G  P+ +T  +LI G      +  +
Sbjct: 86  GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++ +G   +   Y +L++ L ++G+   A ++ + +    + P    +N +++ 
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK +  + A  ++  +   G  P++VTY+ LI G C  G+L  A  +  ++      P+
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T++ ++    +  + K    +L+ M ++G   D   YC+++  +  + ++ +A     
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFN 325

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  ++ SYN +IN +CK  K++ A  L  EM  +    D  T+  LIDGLCK+G
Sbjct: 326 TMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSG 385

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   ++ M+  G   +   YN I+D L K+ ++D AI +   M+ +    D +TY+
Sbjct: 386 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYT 445

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++  LCK  RL  A  +    L  G  I       ++ G   +    +A  + SK+ 
Sbjct: 446 ILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 182/373 (48%), Gaps = 4/373 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            NR+     +P +  +  ++    + +    ++ L  EM   GI  D+ ++N L++C  Q
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           LG    +  VF +++     P   T   ++ GLC       AL     +   GF    V 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCK G+   A  +L+ +      PN + Y TI+    + +      ++ S M 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG + D   Y  +I+ F  +G+L +A     +M+++ +  D+ +++ L++ +CKEG+++
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L  M KQG + D  T+  L+DG C    +  A+     M + G  +N+++YN ++
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +   K  K+D A+N+F+ M  K    D  TY+S++  LCK+ ++  A KL+      GV 
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 421 ILKSAQKAVVDGL 433
             K    +++D L
Sbjct: 404 HDKITYNSILDAL 416



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 149/305 (48%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FC   +L  A  +    I   + PDV T+++L+D +C+         +L  M + GI
Sbjct: 238 ISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI 297

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTY SL+ G      ++ +  + + M + G+  +V SYN +++   ++ K DEA  
Sbjct: 298 KPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMN 357

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F++M C ++ P   T+N +++GLCK+     AL++   +   G   + +TYN ++  LC
Sbjct: 358 LFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALC 417

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++  A  +L ++ D G  P+  TYT ++    +  + K    I   +  KGY    +
Sbjct: 418 KNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVY 477

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I  F       +A   + +M  +G   +  +Y  +I    ++ + + A  LL EM
Sbjct: 478 TYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537

Query: 314 EKQGF 318
             +G 
Sbjct: 538 IARGL 542



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 35/276 (12%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            +I V  FCK  R+++A+ ++   ++ G+ PDVVTY  L+D YC     +   +I N M 
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA 328

Query: 70  EAGIS-----------------------------------PDVVTYNSLIAGATRNSLLS 94
           + G++                                   PDVVTYNSLI G  ++  +S
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKIS 388

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L L+DEM + G+P D  +YNS++  L +  + D+A  +   M    + P   T+ I++
Sbjct: 389 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILI 448

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLCK     +A  +F  L   G+   + TY ++I+G C       A  +L ++ D+G  
Sbjct: 449 DGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCI 508

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           PNA TY  I+   F   +  +  ++L  M  +G  F
Sbjct: 509 PNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLF 544


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 173/325 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+  RL  A + +   ++LG  P +VT+  L++ +C    F    ++++++   G  P+
Sbjct: 124 FCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPN 183

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN++I        ++ +LD+L  M +MGI PDV +YNSL+  LF  G    + R+  
Sbjct: 184 VVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILS 243

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   ++P   TF+ +++   K      A + +  + +    P +VTYN LI GLC  G
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A+ +L  L   G  PNA+TY T++    + ++   G++IL  M R G   D F Y 
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+   + + G+   A   + +MV+ GV  D+ ++N L++  C  GK+  A + L++++K 
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA 341
                  T+ I+I GLCKA  ++ A
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDA 448



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 201/416 (48%), Gaps = 4/416 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V ++ L+ A  +   ++A  ++   +   GIS D+ ++ +LI    R + LS +L 
Sbjct: 76  LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +M+++G  P + ++ SL++    + +  EA  +   ++     P    +N +++ LC
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +    + AL + + ++K G  P++VTYN LI  L  +G    +  IL ++   G +P+ I
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T++ ++    +  +     +  + M ++    +   Y ++I      G L EA   +  +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V+ G   + V+YNTLIN YCK  +++    +L  M + G + D +T+  L  G C+AG  
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A   L  M   G   ++  +N ++D L   GKI  A+   E ++    V    TY+ +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  LCKA ++  A  L  S    GV         ++ GLR     REA ++  K++
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 120/231 (51%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            + K  +L +A+    + I+  V P++VTYN LI+  C     D    +LN +   G  P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VTYN+LI G  +   +   + +L  M   G+  D ++YN+L     Q GK   A +V 
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   + P   TFNI+L+GLC +     AL     LQK   V  ++TYNI+IKGLCKA
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++  A ++   L   G +P+ ITY T+M    R R ++   E+   M+++
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 149/306 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C+  ++  A  ++    ++G+ PDVVTYN LI       ++     IL+ M  
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GISPDV+T+++LI    +   L  +    +EM++  + P++ +YNSL++ L   G  DE
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +V   ++     P   T+N ++NG CK +  D+ +++   + + G   +  TYN L +
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+AG+   A  +L  +   G  P+  T+  ++     + K    L  L  +++     
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I    K  ++++A      +   GV  D+++Y T++    ++     A+ L 
Sbjct: 428 GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487

Query: 311 DEMEKQ 316
            +M+K+
Sbjct: 488 RKMQKE 493



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 1/171 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA R++    I+    R GV  D  TYN L   YCQ   F A   +L RM  
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+ T+N L+ G   +  +  +L  L+++ +      + +YN ++  L +  K ++
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVP 180
           A  +F  +    ++P   T+  M+ GL + R    A  ++R +QK  G +P
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 31/201 (15%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           +  ++ A  K+ + +        +   G+  D+ S+ TLI+ +C+  +L  A   L +M 
Sbjct: 82  FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           K GFE    T   L++G C       A   ++ +  +G++ N+  YN I+D         
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID--------- 192

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
                                 +LC+  ++ +A  +L    K G+R       +++  L 
Sbjct: 193 ----------------------SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230

Query: 435 HSGCRREAKKIQSKIRMAKIS 455
           HSG    + +I S +    IS
Sbjct: 231 HSGTWGVSARILSDMMRMGIS 251


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 201/432 (46%), Gaps = 39/432 (9%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C+A R E+A ++       G  P+V +Y++LI   C+    D    +LN M + G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY SL++G  +   L  ++DL   M+  G PPD   YN L+    + G   EA R+F
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M+     P   T+N +L+G  +         +F+ + + G VP + T+N L+ G CK 
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A  +  E+   G  P+ ++Y T+M+                            G 
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMR----------------------------GM 272

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
           C+        G+  EA   + +M+  GV  DIVSYN LI+ Y K G L+ A  L  E+ K
Sbjct: 273 CSK-------GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G E D ++++ +ID LC+AG +  A +  + M   G   +      +V  L +  ++  
Sbjct: 326 SGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTE 385

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           +  +F++M     V     Y+ +++ LCKAKR     ++     + G        K +++
Sbjct: 386 SCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILE 445

Query: 432 GLRHSGCRREAK 443
            LR S  +  A+
Sbjct: 446 TLRRSDDKEAAE 457



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
            ++YN L++   +    D  Y   N M  AG  P+  TY  L+    +      +  +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M   G  P+V+SY+ L+  L +  K DEA  +  +MI G   P   T+  +L+GLCK  
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A+ +F  +   G  P+ V YN+LI G  K G +  A  + +E+ + G  P   TY 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           +++    R  ++     +   M R+G   + F +  ++  F K+G + EA     +M + 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G   D+VSYNTL+   C +GK   A  LL EM + G   D  ++ ILIDG  K+G +  A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
                 + K G + +  +Y+ I+D L + GK+  A  VF+ M       D+     +V  
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 398 LCKAKRLPSASKLLLSCLK 416
           LC+ +RL  + +L  + +K
Sbjct: 377 LCRGERLTESCELFQAMVK 395



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 172/359 (47%), Gaps = 4/359 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   C+  ++++A  ++ + I  G  P+VVTY  L+   C+         + +RM  
Sbjct: 91  SILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVY 150

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD V YN LI G ++   +  +  L +EMLE G  P V++YNSL+    + G+   
Sbjct: 151 RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGR 210

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F+DM+     P   TFN +L+G CK      A R+F  ++  G  P++V+YN L++
Sbjct: 211 VQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMR 270

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G+C  G+   A+ +L+E+  SG  P+ ++Y  ++    ++      +++   + + G   
Sbjct: 271 GMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEP 330

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T+I    + G++  A    + M+ +G   D      L+   C+  +L  +  L 
Sbjct: 331 DAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELF 390

Query: 311 DEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
             M K  FEC      + +L+  LCKA            + + GF  ++E    I++ L
Sbjct: 391 QAMVK--FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 39/340 (11%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SYN L+  L + G+ D     + DM+     P T T+  +L  LC+ +  + A  +FRG+
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P + +Y+ILI GLC+  ++  A  +L E+ D GH PN +T              
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVT-------------- 124

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                                Y ++++   K+G+LKEA D   +MV  G   D V YN L
Sbjct: 125 ---------------------YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVL 163

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+ + K+G +  AY L +EM ++G     +T+  L+ G  + G     +   + M + G 
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
             N+  +N ++D   K G +  A  +F  M       D  +Y++++  +C   +   A +
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQR 283

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           LL   ++SGV     +   ++DG   SG    A K+  +I
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 7/204 (3%)

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y      Y  ++    K GR          M+  G   +  +Y  L+   C+  + E A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +   M  QG   + ++++ILI GLC+   +  A   L  M   G   N+  Y  ++  L
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K GK+  A+++F  M  +    D   Y+ ++    K   +  A +L    L+ G     
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 424 SAQKAVVDGLRHSGCRREAKKIQS 447
               +++ G    G   E  ++QS
Sbjct: 193 FTYNSLLSGFSRKG---EFGRVQS 213


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 208/426 (48%), Gaps = 5/426 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC+   L  A  +     R G   P+ V+Y++LI   C+    +  + + ++M E G  P
Sbjct: 240 FCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
              TY  LI       L+  + +L DEM+  G  P+V +Y  L+  L + GK +EAN V 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M+   + P   T+N ++NG CK+     A  +   ++K    P + T+N L++GLC+ 
Sbjct: 360 RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+   A  +LK + D+G +P+ ++Y  ++    R     +  ++L++M       D   +
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTF 479

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I AF K G+   A+ ++  M+  G+ LD V+  TLI+  C  GK   A  +L+ + K
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVK 539

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
                  ++  +++D L K   +K     L  +NK+G   ++  Y  +VD L + G I  
Sbjct: 540 MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISG 599

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           +  + E M++     + + Y+ +++ LC+  R+  A KLL +   SGV         +V 
Sbjct: 600 SFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659

Query: 432 GLRHSG 437
           G  ++G
Sbjct: 660 GYVNNG 665



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 195/434 (44%), Gaps = 14/434 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  ++E+A  +    ++ G+ P V+TYN LI+ YC+       + +L  M +    P+
Sbjct: 346 LCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T+N L+ G  R      ++ LL  ML+ G+ PD+ SYN L+  L + G  + A ++  
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLT 465

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   DL P   TF  ++N  CK    D A      + + G   + VT   LI G+C  G
Sbjct: 466 SMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVG 525

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           + R A +IL+ L          +   I+    +  K K  L +L  + + G       Y 
Sbjct: 526 KTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYT 585

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++   ++ G +  +   +E M   G   ++  Y  +IN  C+ G++E A  LL  M+  
Sbjct: 586 TLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---- 372
           G   +  T+T+++ G    G +  A   +  M + G++ N   Y+ ++       K    
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRE 705

Query: 373 -----IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
                I   I+V E +    S     +V  LCK  R   ++ L+ + LKSGV + K+   
Sbjct: 706 TDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKA--- 762

Query: 428 AVVDGLRHSGCRRE 441
             +D +  S C ++
Sbjct: 763 --IDIIMESYCSKK 774



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 48/409 (11%)

Query: 92  LLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
           L+SC     DE+ E+ G   +   Y+SL+  L +L     A   ++ M           +
Sbjct: 143 LISC----FDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDY 198

Query: 151 NIMLNGLCKNRYTD-----------------------------------NALRMFRGLQK 175
             ++N LCKN YT+                                   +AL++F  + +
Sbjct: 199 RTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSR 258

Query: 176 HGF-VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
            G   P  V+Y+ILI GLC+ GRL  A  +  ++G+ G  P+  TYT ++K         
Sbjct: 259 EGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
               +   M  +G   +   Y  +I    + G+++EA     +MV DG+   +++YN LI
Sbjct: 319 KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALI 378

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N YCK+G++  A+ LL  MEK+  + +  T   L++GLC+ G    A   L+ M   G  
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 410
            ++ +YN ++D L ++G ++ A  +  SM       D  T++++++  CK  +   AS  
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS---KIRMAKISH 456
           L   L+ G+ + +     ++DG+ + G  R+A  I     K+RM    H
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPH 547



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 179/417 (42%), Gaps = 49/417 (11%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + R  N  +   C+  +  KA  ++   +  G+ PD+V+YN+LID  C+    +  Y 
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYK 462

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M    + PD +T+ ++I    +      +   L  ML  GI  D  +  +L+  + 
Sbjct: 463 LLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522

Query: 124 QLGKPDEANRVFQDMI---------------------CG--------------DLTPCTA 148
            +GK  +A  + + ++                     C                L P   
Sbjct: 523 NVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVV 582

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+  +++GL ++     + RM   ++  G +P +  Y I+I GLC+ GR+  A  +L  +
Sbjct: 583 TYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR- 267
            DSG +PN +TYT ++K    N K    LE + AM  +GY  +   Y +++  FV   + 
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKG 702

Query: 268 --------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
                   +KE    +EQ+      L I     L+   CKEG+ + +  L+  + K G  
Sbjct: 703 IRETDPECIKELISVVEQLGGSTSGLCIF----LVTRLCKEGRTDESNGLVQTILKSGVF 758

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
            +K    I+     K  + K   L +  + K GF  + +++  ++  L K+G  + A
Sbjct: 759 LEKAIDIIMESYCSKKKHTKCVEL-ITLVLKSGFVPSFKSFCLVIQGLKKEGDTERA 814



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/380 (21%), Positives = 152/380 (40%), Gaps = 49/380 (12%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN+  + ++R S  S        +  +   P+ W  NS +  L     P+ A++V     
Sbjct: 22  YNAFFSVSSRPSQFSSDQVAAHNVASLLKSPN-WEKNSSLKSLVSHMSPNVASQVIS--- 77

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRL 198
                              +    D  +R F  + KH  +  +    N L+K +  +G  
Sbjct: 78  ------------------LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLF 119

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR----KGYTFDGFG 254
           R A  ++  L              I +C   +R  K  L+++S         G+  +   
Sbjct: 120 RVAHDVIVAL--------------IREC---SRCEKEMLKLISCFDELREVSGFRLNYPC 162

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++ +  K+     A     +M  DG  + ++ Y T++N  CK G  EAA + + ++ 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-DSNLEAYNCIVDRLGKDGKI 373
           K GF  D +  T L+ G C+  N++ A    + M++ G    N  +Y+ ++  L + G++
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A  + + M  K     + TY+ ++  LC    +  A  L    +  G +        +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +DGL   G   EA  +  K+
Sbjct: 343 IDGLCRDGKIEEANGVCRKM 362


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 204/414 (49%), Gaps = 10/414 (2%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++IA
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 86  GATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDL 143
           G      +  +LD++ EM E G I P+ ++Y +++    ++G+ DEA +VF +M+  G++
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P    +N ++ G C     D AL     + + G    + TYN+L+  L   GR   A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +++E+G  G AP+  TY  ++    +    K  LEI   M R+G       Y ++I A  
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K G+++E     ++ V  G++ D+V YN LIN +   G ++ A+ ++ EMEK+    D  
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  L+ GLC  G +  AR  ++ M K G   +L  YN ++      G +  A+ +   M
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380

Query: 384 EVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             K       TY++++  LCK  +   A  ++   +++G+    S   ++++GL
Sbjct: 381 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 174/359 (48%), Gaps = 2/359 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  FC   R++ A  I+ +   R G+ P+  TY  +I  +C+    D    + + M 
Sbjct: 76  NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + P+ V YN+LI G      L  +L   D M+E G+   V +YN L+H LF  G+ 
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 195

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  + ++M    L P   T+NI++NG CK      AL +F  + + G    +VTY  L
Sbjct: 196 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K G+++    +  E    G  P+ + Y  ++     +       EI+  M++K  
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T++     +GR+ EA   +++M   G+Q D+V+YNTLI+ Y  +G ++ A  
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           + +EM  +GF     T+  LI GLCK G    A   ++ M + G   +   Y  +++ L
Sbjct: 376 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 168/372 (45%), Gaps = 45/372 (12%)

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +H L        A  +F DM    L  CT TFNIML  LC       AL + R + +   
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR--- 69

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGL 237
            P  VTYN +I G C  GR++ A  I++E+ + G  APN  TY T++    +  +    +
Sbjct: 70  -PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 238 EILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           ++   M  KG    +   Y  +I  +   G+L  A  Y ++MV  GV + + +YN L++ 
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG---- 352
              +G+   AY L++EM  +G   D +T+ ILI+G CK GN+K A    E M++ G    
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 353 -----------------------FDS--------NLEAYNCIVDRLGKDGKIDHAINVFE 381
                                  FD         +L  YN +++     G ID A  +  
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMG 308

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            ME K    D  TY++++  LC   R+  A KL+    K G++        ++ G    G
Sbjct: 309 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKG 368

Query: 438 CRREAKKIQSKI 449
             ++A +I++++
Sbjct: 369 DVKDALRIRNEM 380



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 145/280 (51%), Gaps = 12/280 (4%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILS 241
            T+NI+++ LC AG+   A  +L+++      PNA+TY T++   C R R  +  L+I+ 
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMR 96

Query: 242 AMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCK 299
            M+ R G   + + Y TVI+ + K+GR+ EA    ++M+T G V+ + V YN LI  YC 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +GKL+ A L  D M ++G      T+ +L+  L   G    A   +E M   G   ++  
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++   K+G +  A+ +FE+M  +       TY+S+++ L K  ++    KL    +
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           + G+R       A+++    SG    A +I  ++   +I+
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 83/150 (55%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  + +   +  +++A  I+ +  +  + PD VTYN L+   C     D    +++ M
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + GI PD+VTYN+LI+G +    +  +L + +EM+  G  P + +YN+L+  L + G+ 
Sbjct: 346 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 405

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           D+A  + ++M+   +TP  +T+  ++ GL 
Sbjct: 406 DDAENMVKEMVENGITPDDSTYISLIEGLT 435


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 219/453 (48%), Gaps = 7/453 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR  N  +  F K  + +  +    D I  G  P V TYN++ID  C+    +A   +  
Sbjct: 95  TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 154

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+ PD VTYNS+I G  +   L  ++   +EM +M   PDV +YN+L++C  + G
Sbjct: 155 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 214

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K       +++M    L P   +++ +++  CK      A++ +  +++ G VP   TY 
Sbjct: 215 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 274

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI   CK G L  A  +  E+   G   N +TYT ++       + K   E+   M   
Sbjct: 275 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 334

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I  FVK   +  A + + ++   G++ D++ Y T I   C   K+EAA
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 394

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            ++++EM++ G + +   +T L+D   K+GN       L+ M ++  +  +  +  ++D 
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 454

Query: 367 LGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           L K+  +  A++ F  +        ++  +++M+  LCK  ++ +A+ L    ++ G+  
Sbjct: 455 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 514

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            ++A  +++DG    G   EA  ++ K  MA+I
Sbjct: 515 DRTAYTSLMDGNFKQGNVLEALALRDK--MAEI 545



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 184/374 (49%), Gaps = 1/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  +L        +    G+ P+VV+Y+ L+DA+C+             MR 
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 263

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY SLI    +   LS +  L +EML++G+  +V +Y +L+  L    +  E
Sbjct: 264 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 323

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    + P  A++N +++G  K +  D AL +   L+  G  P+L+ Y   I 
Sbjct: 324 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 383

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   ++  A+ ++ E+ + G   N++ YTT+M   F++     GL +L  MK      
Sbjct: 384 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 443

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               +C +I    K   + +A DY  ++  D G+Q +   +  +I+  CK+ ++EAA  L
Sbjct: 444 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 503

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            ++M ++G   D+  +T L+DG  K GN+  A    + M +IG   +L AY  +V  L  
Sbjct: 504 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 563

Query: 370 DGKIDHAINVFESM 383
             ++  A +  E M
Sbjct: 564 CNQLQKARSFLEEM 577



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 4/372 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +L  ++    +M    + P   S N L+H   +LGK D+  R 
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DMI     P   T+NIM++ +CK    + A  +F  ++  G VP+ VTYN +I G  K
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL       +E+ D    P+ ITY  ++ C  +  K  +GLE    MK  G   +   
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++ AF K G +++A  +   M   G+  +  +Y +LI+  CK G L  A+ L +EM 
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G E +  T+T LIDGLC A  +K A      M+  G   NL +YN ++    K   +D
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+ +   ++ +    D   Y + +  LC  +++ +A  ++    + G++        ++
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 431 DGLRHSGCRREA 442
           D    SG   E 
Sbjct: 418 DAYFKSGNPTEG 429



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 1/273 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R+++AE +       GV+P++ +YN LI  + +  + D    +LN ++  GI PD
Sbjct: 315 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 374

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++ Y + I G      +  +  +++EM E GI  +   Y +LM   F+ G P E   +  
Sbjct: 375 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 434

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKA 195
           +M   D+     TF ++++GLCKN+    A+  F R     G       +  +I GLCK 
Sbjct: 435 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 494

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            ++  A  + +++   G  P+   YT++M   F+       L +   M   G   D   Y
Sbjct: 495 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 554

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
            +++       +L++A  ++E+M+ +G+  D V
Sbjct: 555 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 587



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 54/372 (14%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-------DLTPCT-------- 147
           M   G    V SY  + H LF      +AN V ++M+         D+   T        
Sbjct: 1   MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60

Query: 148 ----ATFNIML---------------------------NGL----CKNRYTDNALRMFRG 172
               A F++++                           NGL     K   TD+  R F+ 
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +   G  P + TYNI+I  +CK G +  AR + +E+   G  P+ +TY +++    +  +
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               +     MK      D   Y  +I  F K G+L    ++  +M  +G++ ++VSY+T
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           L++ +CKEG ++ A     +M + G   ++YT+T LID  CK GN+  A      M ++G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
            + N+  Y  ++D L    ++  A  +F  M+    + +  +Y++++H   KAK +  A 
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 409 KLLLSCLKSGVR 420
           +LL      G++
Sbjct: 361 ELLNELKGRGIK 372


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 194/390 (49%), Gaps = 4/390 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + LG   + V+Y  LI+  C+     A   +L R+    + P+VV YN++I    +  L+
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + + DL  EM+  GI PDV +YN+L+     +GK  +A  +F  MI  ++ P   TFNI+
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G CK R    A  +   + K G  P++ TYN L+   C    +  A+ I   +   G 
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN  +Y+ ++    + +K    + +   M       D   Y ++I    K+G++  A  
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +++M   GV  D ++YN++++  CK  +++ A  LL +M+ +G + D  T+T L+DGLC
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K G ++ AR+  E +   G+  ++  Y  ++      G  D ++++   ME    + ++ 
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY  ++ +L        A KLL   +  G+
Sbjct: 529 TYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 184/345 (53%), Gaps = 5/345 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   + +A  +  + +  G+ PDVVTYN LI  +C          + N+M
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLG 126
               I+P+V T+N L+ G  +   L  + ++L  M++ GI PDV++YNSLM  +CL +  
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVK-- 331

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + ++A  +F  +    + P   +++IM++G CK +  D A+ +F+ +  +  +P++VTYN
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK G++  A  ++ E+ D G   + ITY +I+    +N +    + +L+ MK +
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 451

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y T++    K GRL++A    E ++  G  LD+  Y  +I  +C  G  + +
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDES 511

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNK 350
             LL +ME+ G   +  T+ I+I  L  K  N K  +L  E + +
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 205/418 (49%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+V  ++LI+ + Q       +++L ++ + G  P+V+T  +LI G      +  +
Sbjct: 102 GITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQA 161

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++ +G   +  SY +L++ L ++G+   A ++ + +    + P    +N +++ 
Sbjct: 162 LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 221

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK +  + A  ++  +   G  P++VTYN LI G C  G+++ A  +  ++      PN
Sbjct: 222 MCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPN 281

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    + R+ K    +L+ M ++G   D F Y +++  +  +  + +A     
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   GV  +I SY+ +I+ +CK  K++ A  L  EM       D  T+  LIDGLCK G
Sbjct: 342 TISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLG 401

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   ++ M+  G   +   YN I+D L K+ ++D AI +   M+ +    D  TY+
Sbjct: 402 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYT 461

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++V  LCK  RL  A  +    L  G  +  +   A++ G    G   E+  + SK+ 
Sbjct: 462 TLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 181/374 (48%), Gaps = 5/374 (1%)

Query: 65  LNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            NR+  +    P +  +  ++    +++  S  + L  +M   GI  D+   + L++C  
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           QLG+   +  V   ++     P   T   ++ GLC       AL+    +   GF    V
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +Y  LI GLCK G+   A  +L+ +      PN + Y TI+    + +      ++ S M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG + D   Y  +I+ F  +G++K+ATD   +M+ + +  ++ ++N L++ +CKE +L
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  +L  M KQG + D +T+  L+D  C    +  A+     +++ G + N+ +Y+ +
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    K  K+D A+N+F+ M     + D  TY+S++  LCK  ++  A KL+      GV
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418

Query: 420 RILKSAQKAVVDGL 433
              K    +++D L
Sbjct: 419 PHDKITYNSILDAL 432



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 35/273 (12%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V  FCK  RL++A+ ++   ++ G+ PDV TYN L+D YC     +    I N + 
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344

Query: 70  EAGISP-----------------------------------DVVTYNSLIAGATRNSLLS 94
           + G++P                                   DVVTYNSLI G  +   +S
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L L+DEM + G+P D  +YNS++  L +  + D+A  +   M    + P   T+  ++
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLCKN   ++A  +F  L   G++ ++  Y  +I+G C  G    +  +L ++ ++G  
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCI 524

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           PNA+TY  I+   F   +     ++L  M  +G
Sbjct: 525 PNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 200/422 (47%), Gaps = 4/422 (0%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K+ R +       D +  G +P+  TY  L+ + CQ   F+   ++   M   G SP+V 
Sbjct: 29  KSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           +Y+ LIAG  R   +  + +LL+EM++ G  P+V +Y SL+  L ++GK  EA  +F  M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P    +N++++G  K      A R+F  + + G +P + TYN L+ G  + G  
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
              + + K++   G  PN  T+  ++    +         +   M+  G   D   Y T+
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I      G+  EA   + +M+  GV  DIVSYN LI+ Y K G L+ A  L  E+ K G 
Sbjct: 269 IRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E D ++++ +ID LC+AG +  A +  + M   G   +      +V  L +  ++  +  
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +F++M     V     Y+ +++ LCKAKR     ++     + G        K +++ LR
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 435 HS 436
            S
Sbjct: 449 RS 450



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
            ++YN L++   +    D  Y   N M  AG  P+  TY  L+    +      +  +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M   G  P+V+SY+ L+  L +  K DEA  +  +MI G   P   T+  +L+GLCK  
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A+ +F  +   G  P+ V YN+LI G  K G +  A  + +E+ + G  P   TY 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           +++    R  ++     +   M R+G   + F +  ++  F K+G + EA     +M + 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G   D+VSYNTLI   C +GK   A  LL EM + G   D  ++ ILIDG  K+G +  A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
                 + K G + +  +Y+ I+D L + GK+  A  VF+ M       D+     +V  
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 398 LCKAKRLPSASKLLLSCLK 416
           LC+ +RL  + +L  + +K
Sbjct: 377 LCRGERLTESCELFQAMVK 395



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 4/368 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   C+  ++++A  ++ + I  G  P+VVTY  L+   C+         + +RM  
Sbjct: 91  SILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVY 150

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD V YN LI G ++   +  +  L +EMLE G  P V++YNSL+    + G+   
Sbjct: 151 RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGR 210

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F+DM+     P   TFN +L+G CK      A R+F  ++  G  P++V+YN LI+
Sbjct: 211 VQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIR 270

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G+C  G+   A+ +L+E+  SG  P+ ++Y  ++    ++      +++   + + G   
Sbjct: 271 GMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEP 330

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T+I    + G++  A    + M+ +G   D      L+   C+  +L  +  L 
Sbjct: 331 DAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELF 390

Query: 311 DEMEKQGFECDKY--THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             M K  FEC      + +L+  LCKA            + + GF  ++E    I++ L 
Sbjct: 391 QAMVK--FECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 369 KDGKIDHA 376
           +    D A
Sbjct: 449 RSDDKDAA 456



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 6/329 (1%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SYN L+  L + G+ D     + DM+     P T T+  +L  LC+ +  + A  +FRG+
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P + +Y+ILI GLC+  ++  A  +L E+ D GH PN +TY +++    +  K 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           K  +++ S M  +G   DG  Y  +I  F K G + EA    E+M+  G    + +YN+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIG 352
           ++ + ++G+      L  +M +QG   + +T   L+DG CK G+ ++  RL LE M  +G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE-MRSLG 257

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 408
              ++ +YN ++  +   GK   A  +   M       D  +Y+ ++    K+  L  A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           KL     KSG+     +   ++D L  +G
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 7/204 (3%)

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y      Y  ++    K GR          M+  G   +  +Y  L+   C+  + E A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +   M  QG   + ++++ILI GLC+   +  A   L  M   G   N+  Y  ++  L
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K GK+  A+++F  M  +    D   Y+ ++    K   +  A +L    L+ G     
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 424 SAQKAVVDGLRHSGCRREAKKIQS 447
               +++ G    G   E  ++QS
Sbjct: 193 FTYNSLLSGFSRKG---EFGRVQS 213


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C    L+KA  ++      G +P +VTYN L++ YC+   + A   +++ M 
Sbjct: 236 FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI  DV TYN  I     N   + +  LL +M +  I P+  +YN+L++   + GK  
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A +VF +M   DL+P   T+N ++ G C     + ALR+   ++  G     VTY  L+
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  +   A+ +L+ +  +      I YT ++    +N      ++++  M + G  
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I  F ++G +K A + + +M   G+ L+ + Y+TLI  +C+ G +  A  +
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M   G   D +T  +L+  LC+ G +  A   L +M++IG   N   Y+CI++  G 
Sbjct: 536 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 595

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
            G   +A + F+ M    +    FTY S++  LCK   L  A K L
Sbjct: 596 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 217/437 (49%), Gaps = 5/437 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C  +R  KA  ++    +  + P+ VTYN LI+ + +         + N M +
Sbjct: 307 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 366

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SP+ VTYN+LI G         +L LLD M   G+  +  +Y +L++ L +  K + 
Sbjct: 367 FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFEL 426

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+ + M   D+      + ++++GLCKN   D A+++   + K G  P+++TY+ LI 
Sbjct: 427 AKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLIN 486

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+ G +++A+ I+  +  SG   N I Y+T++    ++      +++ + M   G+  
Sbjct: 487 GFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGA 546

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F    ++++  + G+L EA  ++  M   G+  + ++Y+ +IN Y   G    A+   
Sbjct: 547 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 606

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D+M K G     +T+  L+ GLCK GN+  A+  L  ++ I    +   YN ++    K 
Sbjct: 607 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 666

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  A+ +F+ M     + DS+TYSS++  LC+  +  +A  L  + +  G        
Sbjct: 667 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 726

Query: 427 -KAVVDGLRHSGCRREA 442
              +VDGL  +G  + A
Sbjct: 727 YTCLVDGLSKAGHPKAA 743



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 4/380 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G  P V T NM++ +  +    +  +++   M + GI P+V T+N LI G      L  
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           + +LL +M E G  P + +YN+L++   + G+   A  +   MIC  +     T+N+ ++
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 311

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LC N  +  A  + + ++K    P  VTYN LI G  K G++  A  +  E+     +P
Sbjct: 312 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 371

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  ++        ++  L +L  M+  G   +   Y T++    K  + + A   +
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 431

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M  + + +  ++Y  LI+  CK G L+ A  L+  M K G   D  T++ LI+G C+ 
Sbjct: 432 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 491

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           GNIK A+  +  M + G   N   Y+ ++    + G +  A+ V+  M       D FT 
Sbjct: 492 GNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC 551

Query: 392 SSMVHNLCKAKRLPSASKLL 411
           + +V +LC+  +L  A K L
Sbjct: 552 NVLVSSLCRDGKLGEAEKFL 571



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 205/441 (46%), Gaps = 7/441 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK  + E A+ ++ + +R+  ++   + Y +LID  C+    D    ++  M + G++P
Sbjct: 418 LCKHEKFELAKRLL-ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 476

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV+TY+SLI G  R   +  + +++  M   G+  +   Y++L++   Q G   EA +V+
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 536

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M C        T N++++ LC++     A +    + + G VP  +TY+ +I G    
Sbjct: 537 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 596

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G    A     ++   G  P+  TY +++K   +        + L+ +       D   Y
Sbjct: 597 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 656

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK-LEAAYLLLDEME 314
            T++A   K G L EA    ++MV + V  D  +Y++L+   C++GK + A  L    M 
Sbjct: 657 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +     +   +T L+DGL KAG+ K A    E M K G   +  A+N I+D   + G++ 
Sbjct: 717 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 776

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A + F +M       +  TY+ ++H   K + L     L  + ++ G+   K    +++
Sbjct: 777 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 836

Query: 431 DGLRHSGCRREAKKIQSKIRM 451
            GL  SG      K+  K+ M
Sbjct: 837 LGLSKSGIPDLGVKLLGKMIM 857



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 185/402 (46%), Gaps = 5/402 (1%)

Query: 3    GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            G + + + N  +   CK+  L +A A+    ++  VLPD  TY+ L+   C+        
Sbjct: 649  GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 708

Query: 63   TIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +    M    + P+ V Y  L+ G ++      +    +EM++ G  PD  ++N+++  
Sbjct: 709  CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 768

Query: 122  LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
              + G+  +AN  F  M    + P  AT+NI+L+G  K +     L ++  + + G  P+
Sbjct: 769  CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 828

Query: 182  LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
             +T++ LI GL K+G       +L ++   G   +  T+  ++     + K +   ++++
Sbjct: 829  KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 888

Query: 242  AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
             M   G   D   Y  +     K    +E+T  + +M+ +GV      Y TLIN  C+ G
Sbjct: 889  FMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVG 948

Query: 302  KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             ++ A+ L DEME  GF   +   + ++ GL   G  + A L L++M ++     +  + 
Sbjct: 949  DIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFT 1008

Query: 362  CIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 399
             ++ R  +D KI  A+ +   ME+     D   Y+ ++  +C
Sbjct: 1009 TLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMC 1050



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 223/515 (43%), Gaps = 75/515 (14%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-------FVSFD---- 59
            N+ V + C+  +L +AE  +    R+G++P+ +TY+ +I+ Y         F  FD    
Sbjct: 552  NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 611

Query: 60   ------------------------AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
                                         LNR+     + D V YN+L+A   ++  L  
Sbjct: 612  CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 671

Query: 96   SLDLLDEMLEMGIPPDVWSYNSLMH------------CLF-------------------- 123
            ++ L D+M++  + PD ++Y+SL+             CLF                    
Sbjct: 672  AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 731

Query: 124  ----QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
                + G P  A   F++M+     P T  FN +++   +      A   F  ++  G  
Sbjct: 732  DGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVC 791

Query: 180  PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            P L TYNIL+ G  K   L     +   +   G  P+ +T+ +++    ++    LG+++
Sbjct: 792  PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 851

Query: 240  LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            L  M  +G   D F +  +I  + + G++++A D +  M T GV  D  +YN + N   K
Sbjct: 852  LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 911

Query: 300  EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            +     + ++L EM + G       +  LI+G+C+ G+I+GA    + M  +GF S+  A
Sbjct: 912  KSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 971

Query: 360  YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
             + +V  L   GK + A+ V + M     +    T+++++H  C+  ++  A KL     
Sbjct: 972  ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1031

Query: 416  KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              G+++   A   ++ G+  +G    A ++  ++R
Sbjct: 1032 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1066



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 39/335 (11%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           ++ L+    + G  D A   F+ +      P   T N++L  + K++ T+    +FR + 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G  P + T+NILI GLC  G L+ A  +LK++ ++G  P  +TY T++          
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW-------- 277

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
                               YC       K GR K A + ++ M+  G++ D+ +YN  I
Sbjct: 278 --------------------YC-------KKGRYKAAIELIDYMICKGIEADVCTYNVFI 310

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  C   +   AYLLL +M K+    ++ T+  LI+G  K G I  A      M+K    
Sbjct: 311 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 370

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            N   YN ++      G  + A+ + + ME      +  TY ++++ LCK ++   A +L
Sbjct: 371 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 430

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           L     + + +   A   ++DGL  +G   EA ++
Sbjct: 431 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 465



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 164/382 (42%)

Query: 19   KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
            KA   + A     + ++ G  PD V +N +ID+  +           + MR  G+ P++ 
Sbjct: 736  KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 795

Query: 79   TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            TYN L+ G ++   L   L L   M+  GI PD  +++SL+  L + G PD   ++   M
Sbjct: 796  TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 855

Query: 139  ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
            I         TFNI++N   ++     A  +   +   G  P+  TYN +  GL K    
Sbjct: 856  IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 915

Query: 199  RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
            R +  +L E+ ++G  P    Y T++    R    +   ++   M+  G+         +
Sbjct: 916  RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 975

Query: 259  IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
            +   +  G+ ++A   ++ M+   +   I ++ TL++ +C++ K+  A  L   ME  G 
Sbjct: 976  VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGL 1035

Query: 319  ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
            + D   + +LI G+C  G+   A    E M       N+  Y  +VD +     +     
Sbjct: 1036 KLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEK 1095

Query: 379  VFESMEVKDSFTYSSMVHNLCK 400
            +   ++ +   ++     +L K
Sbjct: 1096 LLTDLQERGLISWGGSTQHLDK 1117



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 1/248 (0%)

Query: 1    MFGKLSTRL-LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
            M G L+ +   NI +  + ++ ++ KA  ++     LGV PD  TYN + +   +  +F 
Sbjct: 857  MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFR 916

Query: 60   AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
                +L+ M E G+ P    Y +LI G  R   +  +  L DEM  +G      + ++++
Sbjct: 917  ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 976

Query: 120  HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
              L   GK ++A  V   M+   L P  ATF  +++  C++     AL++   ++  G  
Sbjct: 977  RGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLK 1036

Query: 180  PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
             ++V YN+LI G+C  G    A  + +E+      PN  TY  ++           G ++
Sbjct: 1037 LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1096

Query: 240  LSAMKRKG 247
            L+ ++ +G
Sbjct: 1097 LTDLQERG 1104



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           ++ LI +Y KEG ++ A    + +   GF+   YT  +++  + K    +        M+
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
             G   N+  +N +++ L  +G +  A N+ + ME    V    TY+++++  CK  R  
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           +A +L+   +  G+          +D L  +    +A  +  K+R   IS
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 335


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 224/446 (50%), Gaps = 12/446 (2%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +N+ V T     +C    L  A  ++ +    G++P+ VTY++LID  C+  + +  +  
Sbjct: 261 MNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEF 320

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M+  GI   V + NS++ G  +      +  + ++ LE G+  +V+++N+L+  L +
Sbjct: 321 YSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCK 379

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK +EA  ++ ++I   ++P   ++N ++ G C+    + A ++++ +  +GF P  VT
Sbjct: 380 EGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT 439

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAM 243
           + IL+ G  K G +  A  I   + D+   P   T   I+K  C   R ++ G ++ +  
Sbjct: 440 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE-GRDLFNKF 498

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G+      Y T+I  F+K G +  A++   +M   G+    V+Y +LI+ +CK   +
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LL++M+++G + D   +  LIDG CK  ++K A   L  +   G   N   YN +
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +        ++ AI++++ M  +    D  TY+S++  L K+ RL  AS +    L  G+
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 678

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKI 445
                A   +++GL + G    A+KI
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKI 704



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 196/426 (46%), Gaps = 40/426 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +  + K    + A  +  D +  G L +V T+N L+   C+    +    + + + 
Sbjct: 336 LNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GISP+VV+YN++I G  R   ++ +  +  EML+ G  P+  ++  LM   F+ G  +
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F  M   ++ P   T  I++ GLCK   +     +F      GFVP  + YN +I
Sbjct: 455 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K G +  A  + +E+ + G  P+ +TYT+++    +     L L++L+ MKRKG  
Sbjct: 515 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 250 FDGFGYCTVIAAFVK-----------------------------------IGRLKEATDY 274
            D   Y T+I  F K                                   +  ++EA D 
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++MV +G+  D+ +Y +LI+   K G+L  A  +  EM  +G   D   HT+LI+GLC 
Sbjct: 635 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 694

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G  + AR  LE MN      ++  YN ++    K+G +  A  + + M     V D+ T
Sbjct: 695 KGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNIT 754

Query: 391 YSSMVH 396
           Y  +V+
Sbjct: 755 YDILVN 760



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 180/423 (42%), Gaps = 75/423 (17%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G+  D  +Y+  +H L        A  + ++M      P   TF  ++    K      A
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 247

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           LR+   +   G    L     L+KG C  G LR+A  ++ E+ +SG  PN +TY+ ++  
Sbjct: 248 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDG 307

Query: 227 CFRNRKYKLGLEILSAMKRKG-----YTFDG----------------------------- 252
           C +N   +   E  S MK KG     Y+ +                              
Sbjct: 308 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANV 367

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           F + T+++   K G++ EA +  ++++  G+  ++VSYN +I  +C++  + AA  +  E
Sbjct: 368 FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 427

Query: 313 MEKQGFECDKYTHTILID-----------------------------------GLCKAG- 336
           M   GF  +  T TIL+D                                   GLCKAG 
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYS 392
           + +G  L  +++++ GF      YN I+D   K+G I+ A NV+  M EV     + TY+
Sbjct: 488 SFEGRDLFNKFVSQ-GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 546

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           S++   CK   +  A KLL    + G+++   A   ++DG       + A ++ +++R A
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 606

Query: 453 KIS 455
            +S
Sbjct: 607 GLS 609



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 113/213 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK N ++ A  ++ D  R G+  D+  Y  LID +C+     + + +LN +R AG+SP+
Sbjct: 552 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 611

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              YNS+I G    + +  ++DL  +M+  GIP D+ +Y SL+  L + G+   A+ +  
Sbjct: 612 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 671

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P      +++NGLC     +NA ++   +     +P ++ YN LI G  K G
Sbjct: 672 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 731

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            L+ A  +  E+ D G  P+ ITY  ++   F+
Sbjct: 732 NLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 764



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 42/206 (20%)

Query: 256 CTVIAAF---VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC-------------- 298
           CT +  F   ++ G + EA  +  Q    GV+LD  +Y+  ++L C              
Sbjct: 159 CTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE 218

Query: 299 ---------------------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
                                KEG +  A  L D+M   G   +    T L+ G C  GN
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 278

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
           ++ A + +  +++ G   N   Y+ ++D   K+G I+ A   +  M+ K      ++ +S
Sbjct: 279 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 338

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++    K +   +A  +    L+SG+
Sbjct: 339 ILEGYLKCQSWQNAFTMFNDALESGL 364


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 204/414 (49%), Gaps = 3/414 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           N  +  +C  +RLE A  +I +    G  PD ++Y  ++   C+         ++ +M +
Sbjct: 243 NCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLK 302

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++ + PD VTYN+ +   +++     +L+ L E  E     D   Y++++H   + G+ D
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 362

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M      P   T+  ++NGLC+ R  D A +M R + KHG  P  V+Y  L+
Sbjct: 363 KAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 422

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G    AR ++    +    PNAITY+ +M    R  K     +++  M +KG+ 
Sbjct: 423 NGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFF 482

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                   +I +  +  ++ EA  +MEQ + +G  +++V++ T+I+ +C++  LEAA  L
Sbjct: 483 PTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 542

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LD+M       D  T+T +ID L K G I+ A      M ++G+      Y  ++ +  +
Sbjct: 543 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCR 602

Query: 370 DGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            G+++  + + E M  +      Y+ ++  LC    L  A KLL   L++  +I
Sbjct: 603 MGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 204/444 (45%), Gaps = 7/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +      NRL+KA   +     + + P+V+TYN LI  YC     +    ++  M  
Sbjct: 208 NTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPF 267

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPD 129
            G SPD ++Y +++    +   +     L+++ML +  + PD  +YN+ +H L + G  D
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA    ++            ++ +++  C+    D A  +   +   G +P++VTY  +I
Sbjct: 328 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 387

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+  ++  A+ +L+++   G  PN ++YT ++    +N       E+++  +   + 
Sbjct: 388 NGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWI 447

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++  F + G+  EA D + +M+  G     V  N LI   C+E K++ A   
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 507

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +++    G   +    T +I G C+  +++ A   L+ M       ++  Y  I+D LGK
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 567

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I+ A  +   M     +    TY +++H  C+  R+    KLL   L    +  ++A
Sbjct: 568 KGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTA 625

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              V++ L   G   +A K+  K+
Sbjct: 626 YNQVIEKLCSFGNLEQAYKLLGKV 649



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 182/383 (47%), Gaps = 5/383 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D + Y  +++   +         +L  M +  I      +  ++   +R   L  ++  L
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXL 192

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M + GI PD+   N+ +H L    + D+A R  + M   ++ P   T+N ++ G C  
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDL 252

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAIT 219
              ++A  +   +   G  P+ ++Y  ++  LCK  R++  R ++ K L DS   P+ +T
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVT 312

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T +    ++      LE L   + + +  D  GY  ++ +F + GR+ +A + + +M 
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   D+V+Y ++IN  C+E K++ A  +L +M K G + +  ++T L++GLCK GN  
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MV 395
            AR  +    +  +  N   Y+ ++    ++GK   A ++   M  K  F        ++
Sbjct: 433 EAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
            +LC+ +++  A + +  CL +G
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNG 515



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 13/270 (4%)

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           ++LN           +R F G +     P       L++ +C+   LR+A W  K  G+ 
Sbjct: 41  MVLNSFTGGYRQTEGIRRFEGGEDESRHP-------LVREICRLIELRSA-WNPKLEGEL 92

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKE 270
            H   ++    +          ++ L       R+  Y  D   Y  ++    K    + 
Sbjct: 93  RHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQG 152

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  M    ++    ++  ++  Y + GKL  A   L  M+K G E D       I 
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIH 212

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
            L     +  A   LE M  +    N+  YNC++       +++ A  +   M  K    
Sbjct: 213 VLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSP 272

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           D  +Y +++  LCK KR+     L+   LK
Sbjct: 273 DKISYYTVMGFLCKEKRIKELRLLMEKMLK 302


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 220/467 (47%), Gaps = 40/467 (8%)

Query: 11  NICVCTFCKANRLEKAEA---IIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           N  V  FC  NR E+A     ++ D   L   PDVV+YN +I+ + +    D  Y +  +
Sbjct: 270 NTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ 329

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + GI PDVVTYN++I G  +  ++  +  +  +ML+ G+ P   +YN L+H     GK
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKN---------------------RYTDNA 166
             E  R+ ++M   DL P    + ++L+ LCKN                        D A
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEA 449

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           + +F  +++ G  P +V Y  LI  LCK GR+  A  ILK         N +       C
Sbjct: 450 VCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA--ILKF--------NQMINEVYGLC 499

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
                K++   E++  M  +G   D   + T++    + GR+ EA   +E M+  GV+ D
Sbjct: 500 TV--EKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPD 557

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           ++SYNTL++ +C  G+ + A  LLD M   G + +++T+  L+ G CKA  I  A   L 
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAK 402
            M   G   ++  YN I+  L + G+   A    +N+  S    D +TY+ +++ LCK  
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +  A K+  S    G+++       ++  L   G + +A  + + I
Sbjct: 678 CVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 219/487 (44%), Gaps = 52/487 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI-LNRMR 69
           +I +  FC+  RLE   A+    ++ G   + + +N L+   C     D    I L RM 
Sbjct: 199 SILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMP 258

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLG 126
           E G +P+VV+YN+L+ G    +    +L+LL  M +   +  PPDV SYN++++  F+ G
Sbjct: 259 EFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREG 318

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D+A  +F  MI   + P   T+N +++GLCK +  D A  +F+ +   G  P   TYN
Sbjct: 319 QVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYN 378

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G    G+ +    +L+E+      P+   Y  ++    +N +      I  ++ RK
Sbjct: 379 CLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRK 438

Query: 247 GYTFDGF---------------------GYCTVIAAFVKIGRLKEATDYMEQMVTD---- 281
           G   D                        Y  +I A  K+GR+ +A     QM+ +    
Sbjct: 439 GIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGL 498

Query: 282 -------------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
                              G++LD+V +NTL+   C+EG++  A  L++ M + G   D 
Sbjct: 499 CTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDV 558

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            ++  L+DG C  G    A   L+ M  IG   N   YN ++    K  +ID A ++   
Sbjct: 559 ISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLRE 618

Query: 383 M----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M       D  TY++++H L +  R   A +L L+ + S  +        +++GL  + C
Sbjct: 619 MLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNC 678

Query: 439 RREAKKI 445
             EA K+
Sbjct: 679 VDEAFKM 685



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 151/296 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L   + N  +C  C+  R+ +A+ +I   +R+GV PDV++YN L+D +C     D    
Sbjct: 520 RLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAK 579

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M   G+ P+  TYN+L+ G  +   +  +  LL EML  G  PDV +YN+++H LF
Sbjct: 580 LLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLF 639

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q G+  EA  ++ +MI         T+NI+LNGLCKN   D A +MF+ L   G    ++
Sbjct: 640 QTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHII 699

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+NI+I  L K G+   A  +   +   G  P+  TY  I +   +    +    + SAM
Sbjct: 700 TFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAM 759

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           +  G   +      ++  F+  G +  A  Y+ ++      L+  + + LI+LY +
Sbjct: 760 EENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSR 815



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 37/394 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R  +A  I    IR G+ PD     M+ +A C          I ++MR+ G+SP+
Sbjct: 419 LCKNGRCTEARNIFDSVIRKGIKPDA----MIDEAVC----------IFDKMRQQGLSPN 464

Query: 77  VVTYNSLI-----AGATRNSLLS-----------CSLD-------LLDEMLEMGIPPDVW 113
           VV Y +LI      G   +++L            C+++       L+ EML+ GI  DV 
Sbjct: 465 VVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVV 524

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            +N+LM  L + G+  EA R+ + M+   + P   ++N +++G C    TD A ++   +
Sbjct: 525 VFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVM 584

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P   TYN L+ G CKA R+  A  +L+E+  +G  P+ +TY TI+   F+  ++
Sbjct: 585 VSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRF 644

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
               E+   M      +D + Y  ++    K   + EA    + + + G+QL I+++N +
Sbjct: 645 SEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIM 704

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I    K GK E A  L   +   G   D  T+ ++ + L K G+++   +    M + G 
Sbjct: 705 IGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGT 764

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
             N    N +V R    G I  A      ++ K+
Sbjct: 765 APNSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 182/434 (41%), Gaps = 44/434 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  +++A+A+    +  GV P   TYN LI  Y     +     +L  M  
Sbjct: 343 NTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMST 402

Query: 71  AGISPDVVTYNSLI---------------------AGATRNSLLSCSLDLLDEMLEMGIP 109
             + PD   Y  L+                      G   ++++  ++ + D+M + G+ 
Sbjct: 403 HDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLS 462

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA--------------------- 148
           P+V +Y +L+  L +LG+ D+A   F  MI      CT                      
Sbjct: 463 PNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLD 522

Query: 149 --TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
              FN ++  LC+      A R+   + + G  P++++YN L+ G C  GR   A  +L 
Sbjct: 523 VVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +   G  PN  TY T++    + R+      +L  M   G T D   Y T++    + G
Sbjct: 583 VMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTG 642

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           R  EA +    M+    Q D+ +YN ++N  CK   ++ A+ +   +  +G +    T  
Sbjct: 643 RFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFN 702

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           I+I  L K G  + A      ++  G   ++E Y  I + L K+G ++    +F +ME  
Sbjct: 703 IMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEEN 762

Query: 387 DSFTYSSMVHNLCK 400
            +   S M++ L +
Sbjct: 763 GTAPNSRMLNALVR 776



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 31/360 (8%)

Query: 27  EAI-IIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM---------------- 68
           EA+ I D +R  G+ P+VV Y  LIDA C+    D      N+M                
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKA 507

Query: 69  -------REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-- 119
                   + GI  DVV +N+L+    R   +  +  L++ ML +G+ PDV SYN+L+  
Sbjct: 508 EELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDG 567

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           HCL   G+ DEA ++   M+   L P   T+N +L+G CK R  D+A  + R +  +G  
Sbjct: 568 HCL--TGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++VTYN ++ GL + GR   A+ +   + +S    +  TY  I+    +N       ++
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKM 685

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             ++  KG       +  +I A +K G+ ++A D    +   G+  D+ +Y  +     K
Sbjct: 686 FQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIK 745

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           EG LE   +L   ME+ G   +      L+      G+I  A  +L  +++  F  +LEA
Sbjct: 746 EGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNF--SLEA 803



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 148/313 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + EKAE ++ + +  G+  DVV +N L+   C+         ++  M   G+ PD
Sbjct: 498 LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPD 557

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V++YN+L+ G         +  LLD M+ +G+ P+ ++YN+L+H   +  + D+A  + +
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+    TP   T+N +L+GL +      A  ++  +       ++ TYNI++ GLCK  
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  + + L   G   + IT+  ++    +  K +  +++ + +   G   D   YC
Sbjct: 678 CVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYC 737

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +    +K G L+E       M  +G   +    N L+  +   G +  A   L +++++
Sbjct: 738 LIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEK 797

Query: 317 GFECDKYTHTILI 329
            F  +  T ++LI
Sbjct: 798 NFSLEASTASMLI 810



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 165/395 (41%), Gaps = 77/395 (19%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG------KPDEANRVFQDMI--CGD-LTPC 146
           +L L D +L    P  V ++N L+  + +        +      +F  M+  C D + P 
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI-L 205
             T++I++   C+    ++   +F  + K G+    + +N L+KGLC A RL  A  I L
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILL 254

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK-RKGYT--FDGFGYCTVIAAF 262
             + + G  PN ++Y T++K      + +  LE+L  M   +G +   D   Y TVI  F
Sbjct: 255 WRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGF 314

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE---------------------- 300
            + G++ +A +   QM+  G+  D+V+YNT+I+  CK                       
Sbjct: 315 FREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSN 374

Query: 301 -------------GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR----- 342
                        GK +    LL+EM     E D + + +L+D LCK G    AR     
Sbjct: 375 GTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDS 434

Query: 343 ----------------LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
                              + M + G   N+  Y  ++D L K G++D AI  F  M   
Sbjct: 435 VIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQM--- 491

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
                 + V+ LC  ++   A +L+   L  G+R+
Sbjct: 492 -----INEVYGLCTVEKWEKAEELVFEMLDQGIRL 521



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 100/226 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA R++ A +++ + +  G  PDVVTYN ++    Q   F     +   M  
Sbjct: 597 NTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMIN 656

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +    D+ TYN ++ G  +N+ +  +  +   +   G+   + ++N ++  L + GK ++
Sbjct: 657 SRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKED 716

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  +    L P   T+ ++   L K    +    +F  ++++G  P     N L++
Sbjct: 717 AMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVR 776

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
                G +  A   L +L +   +  A T + ++    R    +L 
Sbjct: 777 RFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLA 822



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 43/216 (19%)

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D M +  +D V  D  +Y+ LI  +C+ G+LE  + +   + K G+  +      L+ GL
Sbjct: 181 DRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGL 240

Query: 333 CKAGN---------------------------IKG------ARLHLEYMNKIGFDSNLE- 358
           C A                             +KG      A   LE ++ +  D  L  
Sbjct: 241 CDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSC 300

Query: 359 -----AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
                +YN +++   ++G++D A N+F  M  +    D  TY++++  LCKA+ +  A  
Sbjct: 301 PPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKA 360

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +    L  GV+        ++ G   +G  +E  ++
Sbjct: 361 VFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRL 396


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 190/403 (47%), Gaps = 35/403 (8%)

Query: 13  CVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ------------------ 54
           C+C   K   +EKA+A+    I  G++P    Y  LI+ YC+                  
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 55  -FVS----------------FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
             +S                 D  Y I+  M  +G  P+VV Y +LI    +NS    ++
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +L EM E GI PD++ YNSL+  L +  + DEA     +M+   L P   T+   ++G 
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            +     +A +  + +++ G +P  V    LI   CK G++  A    + + D G   +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TYT +M   F+N K     EI   M+ KG   D F Y  +I  F K+G +++A+   ++
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV +G+  +++ YN L+  +C+ G++E A  LLDEM  +G   +  T+  +IDG CK+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  A    + M   G   +   Y  +VD   +   ++ AI +F
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 50/449 (11%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C +  L+ A  I+ + I  G  P+VV Y  LI  + Q   F     +L  M+E GI+PD+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
             YNSLI G ++   +  +   L EM+E G+ P+ ++Y + +    +  +   A++  ++
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 138 M-ICGDLT--------------------PCTA--------------TFNIMLNGLCKNRY 162
           M  CG L                      C+A              T+ +++NGL KN  
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D+A  +FR ++  G  P++ +Y +LI G  K G ++ A  I  E+ + G  PN I Y  
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R+ + +   E+L  M  KG   +   YCT+I  + K G L EA    ++M   G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  D   Y TL++  C+   +E A  +     K+G          LI+ + K G      
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGK---TE 783

Query: 343 LHLEYMNKI---GFD----SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           L  E +N++    FD     N   YN ++D L K+G ++ A  +F  M+    +    TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +S+++   K  R      +    + +G+ 
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P   TY++LID  C+    +   ++L  M   G+S D  TY+ LI G  +      +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L+ EM+  GI    + Y+  +  + + G  ++A  +F  MI   L P    +  ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+ +       +   ++K   V    TY  ++KG+C +G L  A  I+KE+  SG  PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + YTT++K   +N ++   + +L  MK +G   D F Y ++I    K  R+ EA  ++ 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV +G++ +  +Y   I+ Y +  +  +A   + EM + G   +K   T LI+  CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A      M   G   + + Y  +++ L K+ K+D A  +F  M  K    D F+Y 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +++   K   +  AS +    ++ G+         ++ G   SG   +AK++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 39/440 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  RLE A++++++   LGV  D  TY++LID   +  + DA   +++ M  
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340

Query: 71  AGIS-----------------------------------PDVVTYNSLIAGATRNSLLSC 95
            GI+                                   P    Y SLI G  R   +  
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
             +LL EM +  I    ++Y +++  +   G  D A  + ++MI     P    +  ++ 
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              +N    +A+R+ + +++ G  P++  YN LI GL KA R+  AR  L E+ ++G  P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           NA TY   +       ++    + +  M+  G   +      +I  + K G++ EA    
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             MV  G+  D  +Y  L+N   K  K++ A  +  EM  +G   D +++ +LI+G  K 
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           GN++ A    + M + G   N+  YN ++    + G+I+ A  + + M VK    ++ TY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700

Query: 392 SSMVHNLCKAKRLPSASKLL 411
            +++   CK+  L  A +L 
Sbjct: 701 CTIIDGYCKSGDLAEAFRLF 720



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 163/344 (47%), Gaps = 10/344 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K ++++ AE I  +    G+ PDV +Y +LI+ + +  +     +I + M E G++P+V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN L+ G  R+  +  + +LLDEM   G+ P+  +Y +++    + G   EA R+F +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P +  +  +++G C+    + A+ +F G  K G       +N LI  + K G+ 
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782

Query: 199 RTARWILKELGDSGH----APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
                +L  L D        PN +TY  ++    +    +   E+   M+          
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++  + K+GR  E     ++ +  G++ D + Y+ +IN + KEG    A +L+D+M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 315 KQ-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            +     G +    T   L+ G  K G ++ A   +E M ++ +
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 184/426 (43%), Gaps = 32/426 (7%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G   D V + +L D Y      +    + +      + P +     L+    R + L  
Sbjct: 145 VGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLM--HCL---FQLGKPD--EANRVFQDMICGDLTPCTA 148
             D+   M+E  +  DV +Y+ L+  HC     QLGK    +  + F+          TA
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR----------TA 254

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T N+           D AL++   +   G VP   TY++LI GLCK  RL  A+ +L E+
Sbjct: 255 TLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G + +  TY+ ++    + R       ++  M   G     + Y   I    K G +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A    + M+  G+     +Y +LI  YC+E  +   Y LL EM+K+      YT+  +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           + G+C +G++ GA   ++ M   G   N+  Y  ++    ++ +   A+ V + M+    
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D F Y+S++  L KAKR+  A   L+  +++G++       A + G   +     A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543

Query: 445 IQSKIR 450
              ++R
Sbjct: 544 YVKEMR 549



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 43/330 (13%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +  F K   ++KA +I  + +  G+ P+V+ YNML+  +C+    +    +L+ M   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY---------------- 115
           G+ P+ VTY ++I G  ++  L+ +  L DEM   G+ PD + Y                
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 116 ------------------NSLMHCLFQLGKPDEANRVFQDMICGDL----TPCTATFNIM 153
                             N+L++ +F+ GK +    V   ++ G       P   T+NIM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK    + A  +F  +Q    +P ++TY  L+ G  K GR      +  E   +G 
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG----FGYC-TVIAAFVKIGRL 268
            P+ I Y+ I+    +       L ++  M  K    DG       C  +++ F K+G +
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + A   ME MV      D  +   LIN  C
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTYN++ID  C+  + +A   + ++M+ A + P V+TY SL+ G  +    +    +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-----CTATFNIML 154
            DE +  GI PD   Y+ +++   + G   +A  +   M   +          +T   +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           +G  K    + A ++   + +  ++P+  T   LI   C +   R 
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRV 968



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FGK +    NI +   CK   LE A+ +        ++P V+TY  L++ Y +       
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-----VWSYN 116
           + + +    AGI PD + Y+ +I    +  + + +L L+D+M       D     + +  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L+    ++G+ + A +V ++M+     P +AT   ++N  C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 203/413 (49%), Gaps = 12/413 (2%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           VVTY  LID  C+    DA   +L +M +AG +P+VVTY +LI G  +      ++  + 
Sbjct: 10  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVK 69

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            ML  G  PD+ +YNSL+H L    + D+A  V Q+++     P   T++ ++   C+ R
Sbjct: 70  RMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRR 129

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK---ELGDSGHAPNAI 218
             D A  + R +   G V  LV Y   I G C+A R +++R+  +   E+ +SG  P+ +
Sbjct: 130 RLDQARGLIREMILRGSVCNLVVYIDCIFGFCEA-RCQSSRYECRDGDEMIESGRIPDVV 188

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY T +    +  K   GLE+L  M R G   D   +C++I+   K  R+ +A    + M
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME--KQGFECDKYTHTILIDGLCKAG 336
           +  G   D ++Y+ +++   +  +L+    +L+ M+  K G   + YTH   I  LC++G
Sbjct: 249 LERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSG 308

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTY 391
               A+  L  M + G   NL +YN ++D L K G +D A  +   M        D   +
Sbjct: 309 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 368

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREAK 443
           ++++   CKA RL  A +LL+      + +        ++DG    G  ++AK
Sbjct: 369 NTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAK 421



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 205/437 (46%), Gaps = 47/437 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R   A   +   +R G  PD+VTYN LI   C     D    +L  +   G +P+
Sbjct: 55  LCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPN 114

Query: 77  VVTYNSLIAGATRNSLLSCSLDLL------------------------------------ 100
            +TY++L+    R   L  +  L+                                    
Sbjct: 115 HITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD 174

Query: 101 -DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEM+E G  PDV +YN+ +  L + GK D+   + ++M  G + P   TF  +++GLCK
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG--DSGHAPNA 217
               D+A ++F+G+ + G VP+ +TY+I++  L +A RL T   +L+ +    +G     
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            T+   +    R+ K+ L   IL  M   G   +   Y  VI    K G + +A     +
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 278 MVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILIDGLCK 334
           M+  G  + D++ +NTLI+ +CK G+L  A+ LL EM+ +   C  D  T+  LIDG  K
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNI-CVPDVVTYNTLIDGQSK 413

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----T 390
            G++K A+L L+ M  +G   N+  Y  +++   K G  + A ++F+ M  K  F    T
Sbjct: 414 FGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIIT 473

Query: 391 YSSMVHNLCKAKRLPSA 407
           Y++++    KA  +  A
Sbjct: 474 YNTVLSAFSKAGMMSKA 490



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 202/433 (46%), Gaps = 46/433 (10%)

Query: 13  CVCTFCKANRLEKAEAIIIDG---IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           C+  FC+A R + +     DG   I  G +PDVVTYN  I   C+    D G  +L  M 
Sbjct: 156 CIFGFCEA-RCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMD 214

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD------------------ 111
             GI PDVVT+ S+I+G  + + +  +  +   MLE G  PD                  
Sbjct: 215 RGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLD 274

Query: 112 -------------------VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
                              V+++N+ +  L + GK   A  +   MI     P   ++N 
Sbjct: 275 TVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNF 334

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKEL-GD 210
           +++GLCK+   D+A ++ R +   G   P+++ +N LI G CKAGRL  A  +L E+   
Sbjct: 335 VIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAK 394

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           +   P+ +TY T++    +    K    +L  M+  G   +   Y  +I  + K G  +E
Sbjct: 395 NICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEE 454

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTIL 328
           A    ++M   G   DI++YNT+++ + K G +  A  +  +++ +   C  D  T+ IL
Sbjct: 455 AESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRIL 514

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI-DHAINVFESMEVKD 387
           IDG C+A + +     L+ M   G+  +   YN ++ +L +  ++   A+ V++ M  +D
Sbjct: 515 IDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQD 574

Query: 388 SFTYSSMVHNLCK 400
               +S+ ++L +
Sbjct: 575 CVPSASIFNSLVR 587



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 10/356 (2%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   G    V +Y +L+  L + G  D A  + Q M      P   T+  +++GLCK R 
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
             +A++  + + + G  P+LVTYN LI GLC A R+  A  +L+EL  +G APN ITY+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI---GRLKEATDYMEQMV 279
           ++    R R+      ++  M  +G   +   Y   I  F +        E  D  ++M+
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD-GDEMI 179

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D+V+YNT I+  CK GKL+    +L+EM++ G   D  T   +I GLCKA  I 
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTYSS 393
            A    + M + G   +   Y+ ++D L +  ++D    V E M+      V + +T+++
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +  LC++ + P A  +LL  ++SG      +   V+DGL  SG   +A K+  K+
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 4/248 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
             N  +  FCKA RL +A  ++I+     + +PDVVTYN LID   +F S      +L  
Sbjct: 367 FFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQE 426

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G  P+VVTY +LI G  ++ +   +  L DEM   G  PD+ +YN+++    + G 
Sbjct: 427 MQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGM 486

Query: 128 PDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
             +A  V+Q +       +P   T+ I+++G C+   T+  L + + +   G+  +  TY
Sbjct: 487 MSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTY 546

Query: 186 NILIKGLCKAGRLRT-ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           N+LI  L +   + + A  + +++ D    P+A  + ++++   R         ++  M 
Sbjct: 547 NVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMN 606

Query: 245 RKGYTFDG 252
            KG+  D 
Sbjct: 607 EKGHLVDA 614


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 194/394 (49%), Gaps = 23/394 (5%)

Query: 40  PDVVTYNM-----LIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLL 93
           P+VV + +     +I+ +C    +     +L  M E   ISPDVVTYN+LI    +    
Sbjct: 248 PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKF 307

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             + +L DEML  GI P   +Y+S++    +  + D A  +F  M     +P   TFN +
Sbjct: 308 FEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL 367

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G C+ +  D+ +++   + + G V   +TY  LI G C+ G L  A+ +L+E+  SG 
Sbjct: 368 IAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGV 427

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRK------GYTFDGF-----GYCTVIAAF 262
            PN +T  T++     N K K  LE+  AM++        + F+G       Y  +I+  
Sbjct: 428 CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGL 487

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
           +  G+  EA +  E+M   G+  D ++YN++I+  CK+ +L+ A  + D M  + F  + 
Sbjct: 488 INEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNV 547

Query: 323 YTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            T T LI+G CKAG +  G  L  E M + G  +N   Y  ++    K G I+ A+++F+
Sbjct: 548 VTFTTLINGYCKAGRVDDGLELFCE-MGRRGIVANAITYITLIHGFRKVGNINGALDIFQ 606

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            M       D+ T  +M+  L   + L  A  +L
Sbjct: 607 EMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 218/465 (46%), Gaps = 33/465 (7%)

Query: 2   FGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ 54
           FGK++    +  V TF       C  +R+ +A    +D       P+VVT+  L++  C+
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEA----LDLFHQMCKPNVVTFTTLMNGLCR 191

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDV- 112
                    +L+RM E G+ P+ +TY +++ G  +      +L+LL +M E+  I P+V 
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251

Query: 113 -WSYNS---LMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNAL 167
            W       +++     G+  EA ++ Q+M+    ++P   T+N ++N   K      A 
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            ++  +   G +P  +TY+ +I G CK  RL  A  +   +   G +P+ IT+ T++   
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            R ++   G+++L  M   G   +   Y T+I  F ++G L  A D +++MV+ GV  ++
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQ-----------GFECDKYTHTILIDGLCKAG 336
           V+ NTL++  C  GKL+ A  +   M+K            G E D  T+ ILI GL   G
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A    E M   G   +   YN ++  L K  ++D A  +F+SM  K    +  T++
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           ++++  CKA R+    +L     + G+         ++ G R  G
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVG 596



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 22/425 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISP 75
            C+  R+ +A A++   +  G+ P+ +TY  ++D  C+     +   +L +M E   I P
Sbjct: 189 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKP 248

Query: 76  DVVTY-----NSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPD 129
           +VV +       +I G   +   S +  LL EMLE   I PDV +YN+L++   + GK  
Sbjct: 249 NVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFF 308

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  ++ +M+   + P T T++ M++G CK    D A  MF  +   G  P+++T+N LI
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+A R+     +L E+ ++G   N ITYTT++    +        ++L  M   G  
Sbjct: 369 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC 428

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-----------DGVQLDIVSYNTLINLYC 298
            +     T++      G+LK+A +  + M             +GV+ D+ +YN LI+   
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            EGK   A  L +EM  +G   D  T+  +I GLCK   +  A    + M    F  N+ 
Sbjct: 489 NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVV 548

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            +  +++   K G++D  + +F  M     V ++ TY +++H   K   +  A  +    
Sbjct: 549 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608

Query: 415 LKSGV 419
           + SGV
Sbjct: 609 MASGV 613



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K  +  +AE +  + +  G++P  +TY+ +ID +C+    DA   +   M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPD++T+N+LIAG  R   +   + LL EM E G+  +  +Y +L+H   Q+G  + 
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-----------HGFV 179
           A  + Q+M+   + P   T N +L+GLC N    +AL MF+ +QK           +G  
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P++ TYNILI GL   G+   A  + +E+   G  P+ ITY +++    +  +     ++
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +M  K ++ +   + T+I  + K GR+ +  +   +M   G+  + ++Y TLI+ + K
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK 594

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            G +  A  +  EM   G   D  T   ++ GL     +K A   LE
Sbjct: 595 VGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLE 641



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 195/444 (43%), Gaps = 40/444 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F +   LE A  +  D +R   LP V+ +  L+    +    D   ++  +M    +  +
Sbjct: 53  FHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCN 112

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             ++  L+      S L  +L    ++ ++G  P V ++++L+H L    +  EA  +F 
Sbjct: 113 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFH 172

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   TF  ++NGLC+      A+ +   + + G  P  +TY  ++ G+CK G
Sbjct: 173 QMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 197 RLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              +A  +L+++ +  H  PN + +    + C  N                       G+
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMIN-----------------------GF 265

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           C+        GR  EA   +++M+    +  D+V+YN LIN + KEGK   A  L DEM 
Sbjct: 266 CSS-------GRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G      T++ +IDG CK   +  A      M   G   ++  +N ++    +  ++D
Sbjct: 319 PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
             I +   M     V ++ TY++++H  C+   L +A  LL   + SGV         ++
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL 438

Query: 431 DGLRHSGCRREAKKIQSKIRMAKI 454
           DGL  +G  ++A ++   ++ +K+
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKM 462



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 12/247 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA----- 71
           FC+   L  A+ ++ + +  GV P+VVT N L+D  C          +   M+++     
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465

Query: 72  ------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
                 G+ PDV TYN LI+G         + +L +EM   GI PD  +YNS++H L + 
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ 525

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            + DEA ++F  M     +P   TF  ++NG CK    D+ L +F  + + G V   +TY
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 585

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI G  K G +  A  I +E+  SG  P+ IT   ++   +   + K  + +L  ++ 
Sbjct: 586 ITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645

Query: 246 K-GYTFD 251
             GY  +
Sbjct: 646 SVGYQLE 652



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +       +  +AE +  +    G++PD +TYN +I   C+    D    + + M  
Sbjct: 481 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGS 540

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SP+VVT+ +LI G  +   +   L+L  EM   GI  +  +Y +L+H   ++G  + 
Sbjct: 541 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNING 600

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           A  +FQ+M+   + P T T   ML GL        A+ M   LQ
Sbjct: 601 ALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L+   R G +  G     + + F +I  L++A D    MV       ++ +  L+ +  +
Sbjct: 31  LAKKSRDGESGFGGESLKLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVR 90

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G+L+    L  +ME +   C+ Y+ TIL+   C    +  A      + K+GF   +  
Sbjct: 91  MGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVT 150

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ ++  L  + +I  A+++F  M   +  T++++++ LC+  R+  A  LL   L+ G+
Sbjct: 151 FSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 210

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           +  +     +VDG+   G    A  +  K  M ++SH
Sbjct: 211 QPNQITYGTIVDGMCKMGDTVSALNLLRK--MEEVSH 245


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 216/447 (48%), Gaps = 4/447 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L    +  FCK  ++E+A  +       GV P+VVT+N +ID       +D  +    +M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+ P ++TY+ L+ G TR   +  +  +L EM + G PP+V  YN+L+    + G  
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +   M+   L+  ++T+N ++ G CKN   DNA R+ + +   GF     ++  +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC      +A   + E+     +P     TT++    ++ K+   LE+      KG+
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D      ++    + G+L EA    ++++  G  +D VSYNTLI+  C + KL+ A++
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            LDEM K+G + D YT++ILI GL     ++ A    +   + G   ++  Y+ ++D   
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  + +     F+ M  K    ++  Y+ ++   C++ RL  A +L       G+    +
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRM 451
              +++ G+       EAK +  ++RM
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRM 708



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 39/473 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V    +A R+  A  ++ +  + G  P+V+ YN LID++ +  S +    I + M  
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+S    TYN+LI G  +N     +  LL EML +G   +  S+ S++  L      D 
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R   +M+  +++P       +++GLCK+     AL ++      GFV +  T N L+ 
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--- 247
           GLC+AG+L  A  I KE+   G   + ++Y T++  C   +K       L  M ++G   
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573

Query: 248 --YTF------------------------------DGFGYCTVIAAFVKIGRLKEATDYM 275
             YT+                              D + Y  +I    K  R +E  ++ 
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M++  VQ + V YN LI  YC+ G+L  A  L ++M+ +G   +  T+T LI G+   
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             ++ A+L  E M   G + N+  Y  ++D  GK G++     +   M  K    +  TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           + M+    +   +  AS+LL    + G+       K  + G    G   EA K
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 160/330 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LL   +   CK  +  KA  +    +  G + D  T N L+   C+    D  + I   +
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G   D V+YN+LI+G      L  +   LDEM++ G+ PD ++Y+ L+  LF + K 
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA + + D     + P   T+++M++G CK   T+     F  +      P  V YN L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+  C++GRL  A  + +++   G +PN+ TYT+++K      + +    +   M+ +G 
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + F Y  +I  + K+G++ +    + +M +  V  + ++Y  +I  Y ++G +  A  
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           LL+EM ++G   D  T+   I G  K G +
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGV 801



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 4/400 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++   N  +  +CK  + + AE ++ + + +G   +  ++  +I   C  + FD+    
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M    +SP      +LI+G  ++   S +L+L  + L  G   D  + N+L+H L +
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK DEA R+ ++++         ++N +++G C  +  D A      + K G  P+  T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ILI GL    ++  A     +   +G  P+  TY+ ++  C +  + + G E    M 
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K    +   Y  +I A+ + GRL  A +  E M   G+  +  +Y +LI       ++E
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A LL +EM  +G E + + +T LIDG  K G +      L  M+      N   Y  ++
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
               +DG +  A  +   M     V DS TY   ++   K
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 42/365 (11%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +LD+   +   G+ P   + N L+  L +  +  +    F D++C  ++P    F   +N
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             CK    + A+++F  +++ G  P +VT+N +I GL   GR   A    +++ + G  P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             ITY+ ++K   R ++      +L  M +KG+  +   Y  +I +F++ G L +A +  
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH---------- 325
           + MV+ G+ L   +YNTLI  YCK G+ + A  LL EM   GF  ++ +           
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448

Query: 326 -------------------------TILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEA 359
                                    T LI GLCK G + K   L  +++NK GF  +   
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRT 507

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
            N ++  L + GK+D A  + + +     V D  +Y++++   C  K+L  A   L   +
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567

Query: 416 KSGVR 420
           K G++
Sbjct: 568 KRGLK 572



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 41/195 (21%)

Query: 293 LINLYCKEGKLEAAYLLLD----------------------------EMEK--------- 315
           LI +YC + K +  YL LD                            E +K         
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D Y  T  I+  CK G ++ A      M + G   N+  +N ++D LG  G+ D 
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A    E M  +       TYS +V  L +AKR+  A  +L    K G          ++D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 432 GLRHSGCRREAKKIQ 446
               +G   +A +I+
Sbjct: 374 SFIEAGSLNKAIEIK 388


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 216/447 (48%), Gaps = 4/447 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L    +  FCK  ++E+A  +       GV P+VVT+N +ID       +D  +    +M
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+ P ++TY+ L+ G TR   +  +  +L EM + G PP+V  YN+L+    + G  
Sbjct: 311 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 370

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +   M+   L+  ++T+N ++ G CKN   DNA R+ + +   GF     ++  +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 430

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC      +A   + E+     +P     TT++    ++ K+   LE+      KG+
Sbjct: 431 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 490

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D      ++    + G+L EA    ++++  G  +D VSYNTLI+  C + KL+ A++
Sbjct: 491 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 550

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            LDEM K+G + D YT++ILI GL     ++ A    +   + G   ++  Y+ ++D   
Sbjct: 551 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 610

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  + +     F+ M  K    ++  Y+ ++   C++ RL  A +L       G+    +
Sbjct: 611 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 670

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRM 451
              +++ G+       EAK +  ++RM
Sbjct: 671 TYTSLIKGMSIISRVEEAKLLFEEMRM 697



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 39/473 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V    +A R+  A  ++ +  + G  P+V+ YN LID++ +  S +    I + M  
Sbjct: 323 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 382

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+S    TYN+LI G  +N     +  LL EML +G   +  S+ S++  L      D 
Sbjct: 383 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 442

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R   +M+  +++P       +++GLCK+     AL ++      GFV +  T N L+ 
Sbjct: 443 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 502

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--- 247
           GLC+AG+L  A  I KE+   G   + ++Y T++  C   +K       L  M ++G   
Sbjct: 503 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 562

Query: 248 --YTF------------------------------DGFGYCTVIAAFVKIGRLKEATDYM 275
             YT+                              D + Y  +I    K  R +E  ++ 
Sbjct: 563 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 622

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M++  VQ + V YN LI  YC+ G+L  A  L ++M+ +G   +  T+T LI G+   
Sbjct: 623 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 682

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             ++ A+L  E M   G + N+  Y  ++D  GK G++     +   M  K    +  TY
Sbjct: 683 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 742

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           + M+    +   +  AS+LL    + G+       K  + G    G   EA K
Sbjct: 743 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 160/330 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LL   +   CK  +  KA  +    +  G + D  T N L+   C+    D  + I   +
Sbjct: 461 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 520

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G   D V+YN+LI+G      L  +   LDEM++ G+ PD ++Y+ L+  LF + K 
Sbjct: 521 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 580

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA + + D     + P   T+++M++G CK   T+     F  +      P  V YN L
Sbjct: 581 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 640

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+  C++GRL  A  + +++   G +PN+ TYT+++K      + +    +   M+ +G 
Sbjct: 641 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 700

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + F Y  +I  + K+G++ +    + +M +  V  + ++Y  +I  Y ++G +  A  
Sbjct: 701 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 760

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           LL+EM ++G   D  T+   I G  K G +
Sbjct: 761 LLNEMREKGIVPDSITYKEFIYGYLKQGGV 790



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 4/400 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++   N  +  +CK  + + AE ++ + + +G   +  ++  +I   C  + FD+    
Sbjct: 387 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 446

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M    +SP      +LI+G  ++   S +L+L  + L  G   D  + N+L+H L +
Sbjct: 447 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 506

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK DEA R+ ++++         ++N +++G C  +  D A      + K G  P+  T
Sbjct: 507 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 566

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ILI GL    ++  A     +   +G  P+  TY+ ++  C +  + + G E    M 
Sbjct: 567 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 626

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K    +   Y  +I A+ + GRL  A +  E M   G+  +  +Y +LI       ++E
Sbjct: 627 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 686

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A LL +EM  +G E + + +T LIDG  K G +      L  M+      N   Y  ++
Sbjct: 687 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 746

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
               +DG +  A  +   M     V DS TY   ++   K
Sbjct: 747 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 42/365 (11%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +LD+   +   G+ P   + N L+  L +  +  +    F D++C  ++P    F   +N
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 257

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             CK    + A+++F  +++ G  P +VT+N +I GL   GR   A    +++ + G  P
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             ITY+ ++K   R ++      +L  M +KG+  +   Y  +I +F++ G L +A +  
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 377

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH---------- 325
           + MV+ G+ L   +YNTLI  YCK G+ + A  LL EM   GF  ++ +           
Sbjct: 378 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 437

Query: 326 -------------------------TILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEA 359
                                    T LI GLCK G + K   L  +++NK GF  +   
Sbjct: 438 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRT 496

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
            N ++  L + GK+D A  + + +     V D  +Y++++   C  K+L  A   L   +
Sbjct: 497 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 556

Query: 416 KSGVR 420
           K G++
Sbjct: 557 KRGLK 561



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 41/195 (21%)

Query: 293 LINLYCKEGKLEAAYLLLD----------------------------EMEK--------- 315
           LI +YC + K +  YL LD                            E +K         
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 242

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D Y  T  I+  CK G ++ A      M + G   N+  +N ++D LG  G+ D 
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A    E M  +       TYS +V  L +AKR+  A  +L    K G          ++D
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362

Query: 432 GLRHSGCRREAKKIQ 446
               +G   +A +I+
Sbjct: 363 SFIEAGSLNKAIEIK 377


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 195/374 (52%), Gaps = 3/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+ +R   A +++   ++ G  PDVVT + LI+ +CQ         ++++M E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVV YN++I G+ +  L++ +++L D M   G+  D  +YNSL+  L   G+  +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+ +DM+  D+ P   TF  +++   K      A++++  + +    P++ TYN LI 
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GR+  A+ +L  +   G  P+ +TY T++    ++++   G ++   M ++G   
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  + + GR   A +   +M +   + +I +Y+ L+   C   ++E A +L 
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLF 404

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M+K   E D  T+ I+I G+CK GN++ A      ++  G   ++ +Y  ++    + 
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464

Query: 371 GKIDHAINVFESME 384
            + D +  ++  M+
Sbjct: 465 RQWDKSDLLYRKMQ 478



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 191/384 (49%), Gaps = 44/384 (11%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+ +YN++I+  C+   F    +++ +M + G  PDVVT +SLI G  + + +  +
Sbjct: 99  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +DL+ +M EMG  PDV  YN++                                   ++G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTI-----------------------------------IDG 183

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    ++A+ +F  +++ G   + VTYN L+ GLC +GR   A  +++++      PN
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+T ++    +  K+   +++   M R+    D F Y ++I      GR+ EA   ++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MVT G   D+V+YNTLIN +CK  +++    L  EM ++G   D  T+  +I G  +AG
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A+   E  +++    N+  Y+ ++  L  + +++ A+ +FE+M+      D  TY+
Sbjct: 364 RPDAAQ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420

Query: 393 SMVHNLCKAKRLPSASKLL--LSC 414
            ++H +CK   +  A  L   LSC
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSC 444



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 38/337 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ NR+  A  ++     +G  PDVV YN +ID  C+    +    + +RM   G+  D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208

Query: 77  VVTYNSLIAGA-----------------------------------TRNSLLSCSLDLLD 101
            VTYNSL+AG                                     +    S ++ L +
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM    + PDV++YNSL++ L   G+ DEA ++   M+     P   T+N ++NG CK++
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   ++FR + + G V + +TYN +I+G  +AGR   A+ I   + DS   PN  TY+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-DS--RPNIRTYS 385

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++     N + +  L +   M++     D   Y  VI    KIG +++A D    +   
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           G++ D+VSY T+I+ +C++ + + + LL  +M++ G 
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 38/397 (9%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V ++ ++    +  ++D   ++ + M   GI  D+ +YN +I    R S    +L 
Sbjct: 66  LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           ++ +M++ G  PDV + +SL++   Q  +  +A  +   M      P    +N +++G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    ++A+ +F  +++ G   + VTYN L+ GLC +GR   A  +++++      PN I
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+T                                    VI  FVK G+  EA    E+M
Sbjct: 246 TFTA-----------------------------------VIDVFVKEGKFSEAMKLYEEM 270

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
               V  D+ +YN+LIN  C  G+++ A  +LD M  +G   D  T+  LI+G CK+  +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330

Query: 339 -KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-TYSSMVH 396
            +G +L  E M + G   +   YN I+    + G+ D A  +F  M+ + +  TYS +++
Sbjct: 331 DEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            LC   R+  A  L  +  KS + +  +    V+ G+
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 6/326 (1%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +E   +F  MI     P    F+ +L+ + K++  D  + +F  ++  G   +L +YNI+
Sbjct: 51  EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 247
           I  LC+  R   A  ++ ++   G+ P+ +T ++++   C  NR +   ++++S M+  G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMG 169

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D   Y T+I    KIG + +A +  ++M  DGV+ D V+YN+L+   C  G+   A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+ +M  +    +  T T +ID   K G    A    E M +   D ++  YN +++ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
              G++D A  + + M  K    D  TY+++++  CK+KR+   +KL     + G+    
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKI 449
                ++ G   +G    A++I S++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRM 375



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 32/232 (13%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            F K  +  +A  +  +  R  V PDV TYN LI+  C     D    +L+ M   G  P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI G  ++  +     L  EM + G+  D  +YN+++   FQ G+PD A  +F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372

Query: 136 --------------------------------QDMICGDLTPCTATFNIMLNGLCKNRYT 163
                                           ++M   ++     T+NI+++G+CK    
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           ++A  +FR L   G  P++V+Y  +I G C+  +   +  + +++ + G  P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 3/170 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ R+++   +  +  + G++ D +TYN +I  Y Q    DA   I +RM  
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P++ TY+ L+ G   N  +  +L L + M +  I  D+ +YN ++H + ++G  ++
Sbjct: 378 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           A  +F+ + C  L P   ++  M++G C+ R  D +  ++R +Q+ G +P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 39/221 (17%)

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L+E  D   +M+       IV ++ +++   K    +    L   ME  G   D Y++ I
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 328 LIDGLCK------AGNIKGARLHLEY-----------------------------MNKIG 352
           +I+ LC+      A ++ G  +   Y                             M ++G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
           F  ++  YN I+D   K G ++ A+ +F+ ME      D+ TY+S+V  LC + R   A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +L+   +   +        AV+D     G   EA K+  ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + + R  +I +   C   R+EKA  +  +  +  +  D+ TYN++I   C+  + + 
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 110
            + +   +   G+ PDVV+Y ++I+G  R      S  L  +M E G+ P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 216/447 (48%), Gaps = 4/447 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L    +  FCK  ++E+A  +       GV P+VVT+N +ID       +D  +    +M
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+ P ++TY+ L+ G TR   +  +  +L EM + G PP+V  YN+L+    + G  
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +   M+   L+  ++T+N ++ G CKN   DNA R+ + +   GF     ++  +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC      +A   + E+     +P     TT++    ++ K+   LE+      KG+
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D      ++    + G+L EA    ++++  G  +D VSYNTLI+  C + KL+ A++
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            LDEM K+G + D YT++ILI GL     ++ A    +   + G   ++  Y+ ++D   
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  + +     F+ M  K    ++  Y+ ++   C++ RL  A +L       G+    +
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRM 451
              +++ G+       EAK +  ++RM
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRM 721



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 39/473 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V    +A R+  A  ++ +  + G  P+V+ YN LID++ +  S +    I + M  
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+S    TYN+LI G  +N     +  LL EML +G   +  S+ S++  L      D 
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 466

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R   +M+  +++P       +++GLCK+     AL ++      GFV +  T N L+ 
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--- 247
           GLC+AG+L  A  I KE+   G   + ++Y T++  C   +K       L  M ++G   
Sbjct: 527 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586

Query: 248 --YTF------------------------------DGFGYCTVIAAFVKIGRLKEATDYM 275
             YT+                              D + Y  +I    K  R +E  ++ 
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M++  VQ + V YN LI  YC+ G+L  A  L ++M+ +G   +  T+T LI G+   
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             ++ A+L  E M   G + N+  Y  ++D  GK G++     +   M  K    +  TY
Sbjct: 707 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 766

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           + M+    +   +  AS+LL    + G+       K  + G    G   EA K
Sbjct: 767 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 160/330 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LL   +   CK  +  KA  +    +  G + D  T N L+   C+    D  + I   +
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G   D V+YN+LI+G      L  +   LDEM++ G+ PD ++Y+ L+  LF + K 
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA + + D     + P   T+++M++G CK   T+     F  +      P  V YN L
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I+  C++GRL  A  + +++   G +PN+ TYT+++K      + +    +   M+ +G 
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + F Y  +I  + K+G++ +    + +M +  V  + ++Y  +I  Y ++G +  A  
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           LL+EM ++G   D  T+   I G  K G +
Sbjct: 785 LLNEMREKGIVPDSITYKEFIYGYLKQGGV 814



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 4/400 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++   N  +  +CK  + + AE ++ + + +G   +  ++  +I   C  + FD+    
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M    +SP      +LI+G  ++   S +L+L  + L  G   D  + N+L+H L +
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK DEA R+ ++++         ++N +++G C  +  D A      + K G  P+  T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ILI GL    ++  A     +   +G  P+  TY+ ++  C +  + + G E    M 
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K    +   Y  +I A+ + GRL  A +  E M   G+  +  +Y +LI       ++E
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A LL +EM  +G E + + +T LIDG  K G +      L  M+      N   Y  ++
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
               +DG +  A  +   M     V DS TY   ++   K
Sbjct: 771 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 42/365 (11%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +LD+   +   G+ P   + N L+  L +  +  +    F D++C  ++P    F   +N
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 281

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             CK    + A+++F  +++ G  P +VT+N +I GL   GR   A    +++ + G  P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             ITY+ ++K   R ++      +L  M +KG+  +   Y  +I +F++ G L +A +  
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH---------- 325
           + MV+ G+ L   +YNTLI  YCK G+ + A  LL EM   GF  ++ +           
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461

Query: 326 -------------------------TILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEA 359
                                    T LI GLCK G + K   L  +++NK GF  +   
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRT 520

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
            N ++  L + GK+D A  + + +     V D  +Y++++   C  K+L  A   L   +
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580

Query: 416 KSGVR 420
           K G++
Sbjct: 581 KRGLK 585



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 41/195 (21%)

Query: 293 LINLYCKEGKLEAAYLLLD----------------------------EMEK--------- 315
           LI +YC + K +  YL LD                            E +K         
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 266

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D Y  T  I+  CK G ++ A      M + G   N+  +N ++D LG  G+ D 
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A    E M  +       TYS +V  L +AKR+  A  +L    K G          ++D
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386

Query: 432 GLRHSGCRREAKKIQ 446
               +G   +A +I+
Sbjct: 387 SFIEAGSLNKAIEIK 401


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 190/403 (47%), Gaps = 35/403 (8%)

Query: 13  CVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ------------------ 54
           C+C   K   +EKA+A+    I  G++P    Y  LI+ YC+                  
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 55  -FVS----------------FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
             +S                 D  Y I+  M  +G  P+VV Y +LI    +NS    ++
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +L EM E GI PD++ YNSL+  L +  + DEA     +M+   L P   T+   ++G 
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            +     +A +  + +++ G +P  V    LI   CK G++  A    + + D G   +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TYT +M   F+N K     EI   M+ KG   D F Y  +I  F K+G +++A+   ++
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV +G+  +++ YN L+  +C+ G++E A  LLDEM  +G   +  T+  +IDG CK+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  A    + M   G   +   Y  +VD   +   ++ AI +F
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 50/449 (11%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C +  L+ A  I+ + I  G  P+VV Y  LI  + Q   F     +L  M+E GI+PD+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
             YNSLI G ++   +  +   L EM+E G+ P+ ++Y + +    +  +   A++  ++
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 138 M-ICGDLT--------------------PCTA--------------TFNIMLNGLCKNRY 162
           M  CG L                      C+A              T+ +++NGL KN  
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D+A  +FR ++  G  P++ +Y +LI G  K G ++ A  I  E+ + G  PN I Y  
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R+ + +   E+L  M  KG   +   YCT+I  + K G L EA    ++M   G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  D   Y TL++  C+   +E A  +     K+G          LI+ + K G      
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGK---TE 783

Query: 343 LHLEYMNKI---GFD----SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           L  E +N++    FD     N   YN ++D L K+G ++ A  +F  M+    +    TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +S+++   K  R      +    + +G+ 
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P   TY++LID  C+    +   ++L  M   G+S D  TY+ LI G  +      +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L+ EM+  GI    + Y+  +  + + G  ++A  +F  MI   L P    +  ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+ +       +   ++K   V    TY  ++KG+C +G L  A  I+KE+  SG  PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + YTT++K   +N ++   + +L  MK +G   D F Y ++I    K  R+ EA  ++ 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV +G++ +  +Y   I+ Y +  +  +A   + EM + G   +K   T LI+  CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A      M   G   + + Y  +++ L K+ K+D A  +F  M  K    D F+Y 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +++   K   +  AS +    ++ G+         ++ G   SG   +AK++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 39/440 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  RLE A++++++   LGV  D  TY++LID   +  + DA   +++ M  
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340

Query: 71  AGIS-----------------------------------PDVVTYNSLIAGATRNSLLSC 95
            GI+                                   P    Y SLI G  R   +  
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
             +LL EM +  I    ++Y +++  +   G  D A  + ++MI     P    +  ++ 
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              +N    +A+R+ + +++ G  P++  YN LI GL KA R+  AR  L E+ ++G  P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           NA TY   +       ++    + +  M+  G   +      +I  + K G++ EA    
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             MV  G+  D  +Y  L+N   K  K++ A  +  EM  +G   D +++ +LI+G  K 
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           GN++ A    + M + G   N+  YN ++    + G+I+ A  + + M VK    ++ TY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700

Query: 392 SSMVHNLCKAKRLPSASKLL 411
            +++   CK+  L  A +L 
Sbjct: 701 CTIIDGYCKSGDLAEAFRLF 720



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 163/344 (47%), Gaps = 10/344 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K ++++ AE I  +    G+ PDV +Y +LI+ + +  +     +I + M E G++P+V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN L+ G  R+  +  + +LLDEM   G+ P+  +Y +++    + G   EA R+F +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P +  +  +++G C+    + A+ +F G  K G       +N LI  + K G+ 
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782

Query: 199 RTARWILKELGDSGH----APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
                +L  L D        PN +TY  ++    +    +   E+   M+          
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++  + K+GR  E     ++ +  G++ D + Y+ +IN + KEG    A +L+D+M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 315 KQ-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            +     G +    T   L+ G  K G ++ A   +E M ++ +
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 184/426 (43%), Gaps = 32/426 (7%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G   D V + +L D Y      +    + +      + P +     L+    R + L  
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLM--HCL---FQLGKPD--EANRVFQDMICGDLTPCTA 148
             D+   M+E  +  DV +Y+ L+  HC     QLGK    +  + F+          TA
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR----------TA 254

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T N+           D AL++   +   G VP   TY++LI GLCK  RL  A+ +L E+
Sbjct: 255 TLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G + +  TY+ ++    + R       ++  M   G     + Y   I    K G +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A    + M+  G+     +Y +LI  YC+E  +   Y LL EM+K+      YT+  +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           + G+C +G++ GA   ++ M   G   N+  Y  ++    ++ +   A+ V + M+    
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D F Y+S++  L KAKR+  A   L+  +++G++       A + G   +     A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543

Query: 445 IQSKIR 450
              ++R
Sbjct: 544 YVKEMR 549



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 43/330 (13%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +  F K   ++KA +I  + +  G+ P+V+ YNML+  +C+    +    +L+ M   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY---------------- 115
           G+ P+ VTY ++I G  ++  L+ +  L DEM   G+ PD + Y                
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 116 ------------------NSLMHCLFQLGKPDEANRVFQDMICGDL----TPCTATFNIM 153
                             N+L++ +F+ GK +    V   ++ G       P   T+NIM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK    + A  +F  +Q    +P ++TY  L+ G  K GR      +  E   +G 
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG----FGYC-TVIAAFVKIGRL 268
            P+ I Y+ I+    +       L ++  M  K    DG       C  +++ F K+G +
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + A   ME MV      D  +   LIN  C
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTYN++ID  C+  + +A   + ++M+ A + P V+TY SL+ G  +    +    +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-----CTATFNIML 154
            DE +  GI PD   Y+ +++   + G   +A  +   M   +          +T   +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           +G  K    + A ++   + +  ++P+  T   LI   C +   R 
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRV 968



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FGK +    NI +   CK   LE A+ +        ++P V+TY  L++ Y +       
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-----VWSYN 116
           + + +    AGI PD + Y+ +I    +  + + +L L+D+M       D     + +  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L+    ++G+ + A +V ++M+     P +AT   ++N  C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 219/453 (48%), Gaps = 7/453 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR  N  +  F +  + +  +    D I  G  P V TYN++ID  C+    +A   +  
Sbjct: 98  TRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFE 157

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+ PD VTYNS+I G  +   L  ++   +EM  M   PDV +YN+L++C  + G
Sbjct: 158 EMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFG 217

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +    F++M    L P   +++ +++  CK      AL+ +  +++ G VP   TY 
Sbjct: 218 KLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYT 277

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+   CK G L  A  +  E+   G   N +TYT ++       + K   E+   M   
Sbjct: 278 SLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTA 337

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I  FVK   +  A + +++M   G++ D++ Y T I   C   K+EAA
Sbjct: 338 GVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAA 397

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            ++++EM+++G + + + +T L+D   K+ N       LE M ++  +     +  ++D 
Sbjct: 398 KVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDG 457

Query: 367 LGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           L K+  +  AI+ F  +        ++  Y++M+  LCK  ++ +A+ L     + G+  
Sbjct: 458 LCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVP 517

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
            ++A  +++DG    G   +A  ++ K  MA+I
Sbjct: 518 DRTAYTSLIDGKLKQGNVVQALALRDK--MAEI 548



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 4/350 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +   +L    +M    + P   S N L+H   +LGK D   R 
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DMI     P   T+NIM++ +CK    + A  +F  ++  G +P+ VTYN +I G  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL    +  +E+      P+ ITY T++ C  +  K   GLE    MK+ G   +   
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++ AF K   +++A  +   M   G+  +  +Y +L++ YCK G L  A+ L DEM 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G E +  T+T LIDGLC    IK A      M   G   NL +Y  ++    K   +D
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            A+ + + M+ +    D   Y + + +LC  +++ +A  ++    + G++
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIK 410



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 1/346 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  +L K      +  + G+ P+VV+Y+ L+DA+C+             MR 
Sbjct: 207 NTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRR 266

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY SL+    +   LS +  L DEM ++G+  +V +Y +L+  L  + +  E
Sbjct: 267 LGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKE 326

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M+   + P  A++  +++G  K +  D AL +   ++  G  P+L+ Y   I 
Sbjct: 327 AEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIW 386

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC   ++  A+ ++ E+ + G   N   YTT+M   F++     GL +L  M       
Sbjct: 387 SLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEV 446

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               +C +I    K   + +A DY  ++  D G+Q +   Y  +I+  CKE ++EAA  L
Sbjct: 447 TAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTL 506

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            ++M ++G   D+  +T LIDG  K GN+  A    + M +IG +S
Sbjct: 507 FEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVES 552



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 153/349 (43%), Gaps = 22/349 (6%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL------------------TPCTA 148
           G    + SY  + H LF      +ANR+ ++M+                       P   
Sbjct: 5   GFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG 64

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            F+ + + L +    + AL+ F  +++    P+  + N L+    + G+    +   K++
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             +G  P   TY  ++ C  +    +    +   MK +G   D   Y ++I  + K+GRL
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +   + E+M +   + D+++YNTLIN +CK GKL        EM++ G + +  +++ L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           +D  CK   ++ A      M ++G   N   Y  +VD   K G +  A  + + M     
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             +  TY++++  LC  +R+  A +L    + +GV    ++  A++ G 
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGF 353


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 202/424 (47%), Gaps = 8/424 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGY-TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           LP + + N+L+++   FV   A        +  AG  PD   +N ++        L  +L
Sbjct: 119 LPSLSSCNLLLESLL-FVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 98  DLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            ++  M   E   PPD +SYN ++  L++ GK  +A +VF +M+   + P   T+N M++
Sbjct: 178 AMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMID 237

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  K    +   R+   +   G  P +VTYN+L+ GLC+AGR+   R ++ E+      P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 297

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY+ +     R  + +  L + +   +KG     +    ++    K G++ +A   +
Sbjct: 298 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 357

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E +V  G+    V YNTLIN YC+   L  A+ + ++M+ +    D  T+  LI+GLCK 
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             +  A   +  M K G D ++E +N ++D  G  G+++    V   M+ K    D  ++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            S+V   CK  ++P A  +L   +   V        +++D    SG   +A  +  K++ 
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 537

Query: 452 AKIS 455
           + +S
Sbjct: 538 SGVS 541



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 219/482 (45%), Gaps = 41/482 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    ++ +   A  +  + + +GV+P+ +TYN +ID + +    +AG+ + ++M  
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH 257

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++VTYN L++G  R   +  +  L+DEM    + PD ++Y+ L   L + G+   
Sbjct: 258 DGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRT 317

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV------- 183
              +F + +   +     T +I+LNGLCK+     A ++   L   G VP  V       
Sbjct: 318 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN 377

Query: 184 ----------------------------TYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                       TYN LI GLCK   +  A  ++ E+  SG  P
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 437

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  T+ T++       + +    +LS M++KG   D   + +V+ AF K G++ EA   +
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M+   V  +   YN++I+ Y + G  E A+LL+++M+  G      T+ +L+ GLC++
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TY 391
             I  A   +  +   G   ++ +YN I+      G  D A+ + + M    ++ +  TY
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTY 617

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            ++V  L  A R+     L    L   V    S    +VD   +  C  ++K    K  M
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA--YVRCENDSKVASLKKEM 675

Query: 452 AK 453
           ++
Sbjct: 676 SE 677



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 35/346 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  ++ KAE ++   +  G++P  V YN LI+ YCQ       + I  +M+ 
Sbjct: 338 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM----------H 120
             I PD +TYN+LI G  +  +++ + DL+ EM + G+ P V ++N+L+           
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457

Query: 121 CLFQL-------------------------GKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           C   L                         GK  EA  +  DMI  D+ P    +N +++
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              ++  T+ A  +   ++  G    +VTYN+L+KGLC++ ++  A  ++  L + G  P
Sbjct: 518 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 577

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y TI+  C         LE+L  M + G       Y T+++A    GR+ +     
Sbjct: 578 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 637

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           +QM+   V+     Y  +++ Y +         L  EM ++G   D
Sbjct: 638 QQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 216/456 (47%), Gaps = 18/456 (3%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI + + C+  ++++A  +++        PDVV+Y+ +ID YC          ++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSL-------DLLDEMLEMGIPPDVWSYNSL 118
           + M+  G+ P+  TYNS+I       LL C +        +L EM+   I PD   Y +L
Sbjct: 317 DDMQIKGLKPNRYTYNSII-------LLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +H  F+LG    AN+ F +M+   ++P   T+  ++ G  +         +F  +   G 
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P+ VTY  LI   CKAG +  A  +  E+   G  PN +TY  ++    ++ +     E
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M++KG   +   Y +++    K G +++A   M++M   G+  D ++Y T+I+ YC
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           + G ++ A+ LL EM  +G +    T  +L++G C  G ++     L +M + G   +  
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++ +      ++    +++ M       DS TY+ ++   CKA+ L  A  L    
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++ G     ++  A++          EA+++  ++R
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMR 705



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 197/404 (48%), Gaps = 4/404 (0%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           AN  E  E  I      G+  +  +YN++I + C+       + +L +M     +PDVV+
Sbjct: 236 ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS 295

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y+++I G      L  +L L+D+M   G+ P+ ++YNS++  L ++GK  EA +V ++M+
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P    +  +++G  K  +   A + F  +      P+ +TY  LI+G  + G++ 
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
             + +  E+   G  P+ +TYTT++    +  +      + + M + G T +   Y  +I
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               K G L  A + +++M   G+QL++  YN+++N  CK G +E A  L+ EME  G +
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+T +ID  C+ G+I  A   L+ M   G    +  +N +++     G ++    +
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 380 ----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
                E   V D+ TY++++   C    + + +K+       GV
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 153/297 (51%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            +CKA  +  A ++  + +++G+ P++VTY  LID  C+    D    +L+ MR+ G+  
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V  YNS++ G  +   +  ++ L+ EM   GI PD  +Y +++    +LG  D+A+++ 
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   L P   TFN+++NG C     ++  R+   + + G VP+ +TYN L+K  C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             + T   I K + + G AP++ TY  ++K   + R  K    +   M  KGY      Y
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             +I  F K  +  EA +  E+M   G+  D   YN  +++  +EG +E    L DE
Sbjct: 682 NALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 178/404 (44%), Gaps = 35/404 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +  +AE ++ + +   ++PD V Y  LI  + +           + M  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ISPD +TY +LI G  +   +    +L  EM+  G+ PD  +Y +L+    + G+   
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M+   +TP   T+  +++GLCK+   D A  +   ++K G    +  YN ++ 
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----NRKYKL----------- 235
           G+CKAG +  A  ++KE+  +G  P+AITYTT++    R    ++ +KL           
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 236 --------------------GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
                               G  +L  M  KG   D   Y T++        +   T   
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   GV  D  +YN LI  +CK   L+ A+ L  EM ++G+     ++  LI    K 
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
                AR   E M   G  ++ E YN  VD   ++G ++  +N+
Sbjct: 692 RKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 9/237 (3%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LN+C+        CKA  +E+A  ++ +    G+ PD +TY  +IDAYC+    D  + +
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCL 122
           L  M + G+ P VVT+N L+ G     +L     LL  MLE GI PD  +YN+LM  HC+
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
                 +   ++++ M    + P + T+NI++ G CK R    A  +++ + + G+VP +
Sbjct: 621 --RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            +YN LIK   K  +   AR + +E+   G   +   Y   +  C+     ++ L +
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 37/382 (9%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+ + ++           LS +  LLD++L  G+   V S N+    L ++    E   +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAF---LSRIANNSEGIEM 244

Query: 135 FQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
              + C   ++  T ++NI++  LC+      A R+   +      P++V+Y+ +I G C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L+ A  ++ ++   G  PN  TY +I+    +  K     ++L  M  +    D  
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  F K+G ++ A  + ++M++  +  D ++Y TLI  + + GK+     L  EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
             +G + D+ T+T LID  CKAG +  A  LH E M ++G   N+               
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE-MVQMGMTPNI--------------- 468

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
                            TY +++  LCK   L +A++LL    K G+++      ++V+G
Sbjct: 469 ----------------VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
           +  +G   +A K+  ++ +A I
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGI 534



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 11/237 (4%)

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           F N K ++G+++     R  YT+  +G     +       V+IG L EA   ++++++ G
Sbjct: 161 FLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYG 220

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           + + + S N  ++        E   + +    + G   +  ++ I+I  LC+ G +K A 
Sbjct: 221 LVVTVDSCNAFLSRIANNS--EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAH 278

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             L  M+      ++ +Y+ ++D     G++  A+ + + M++K    + +TY+S++  L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           CK  +   A K+L   +   +         ++ G    G  R A K   ++   KIS
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 43/95 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA  L++A  +  + I  G +P V +YN LI  + +   F     +   MR 
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
            G+  D   YN  +        +  +L+L DE +E
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 4/406 (0%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             NI +   C    L+KA  ++      G +P +VTYN L++ YC+   + A   +++ M 
Sbjct: 987  FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 1046

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              GI  DV TYN  I     N   + +  LL +M +  I P+  +YN+L++   + GK  
Sbjct: 1047 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
             A +VF +M   DL+P   T+N ++ G C     + ALR+   ++  G     VTY  L+
Sbjct: 1107 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166

Query: 190  KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             GLCK  +   A+ +L+ +  +      I YT ++    +N      ++++  M + G  
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 250  FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
             D   Y ++I  F ++G +K A + + +M   G+ L+ + Y+TLI  +C+ G +  A  +
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286

Query: 310  LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
               M   G   D +T  +L+  LC+ G +  A   L +M++IG   N   Y+CI++  G 
Sbjct: 1287 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 1346

Query: 370  DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
             G   +A + F+ M    +    FTY S++  LCK   L  A K L
Sbjct: 1347 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 217/437 (49%), Gaps = 5/437 (1%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            N+ +   C  +R  KA  ++    +  + P+ VTYN LI+ + +         + N M +
Sbjct: 1058 NVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 1117

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +SP+ VTYN+LI G         +L LLD M   G+  +  +Y +L++ L +  K + 
Sbjct: 1118 FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFEL 1177

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            A R+ + M   D+      + ++++GLCKN   D A+++   + K G  P+++TY+ LI 
Sbjct: 1178 AKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLIN 1237

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            G C+ G +++A+ I+  +  SG   N I Y+T++    ++      +++ + M   G+  
Sbjct: 1238 GFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGA 1297

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
            D F    ++++  + G+L EA  ++  M   G+  + ++Y+ +IN Y   G    A+   
Sbjct: 1298 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 1357

Query: 311  DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            D+M K G     +T+  L+ GLCK GN+  A+  L  ++ I    +   YN ++    K 
Sbjct: 1358 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 1417

Query: 371  GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            G +  A+ +F+ M     + DS+TYSS++  LC+  +  +A  L  + +  G        
Sbjct: 1418 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 1477

Query: 427  -KAVVDGLRHSGCRREA 442
               +VDGL  +G  + A
Sbjct: 1478 YTCLVDGLSKAGHPKAA 1494



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 4/380 (1%)

Query: 36   LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            +G  P V T NM++ +  +    +  +++   M + GI P+V T+N LI G      L  
Sbjct: 943  VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 1002

Query: 96   SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            + +LL +M E G  P + +YN+L++   + G+   A  +   MIC  +     T+N+ ++
Sbjct: 1003 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 1062

Query: 156  GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             LC N  +  A  + + ++K    P  VTYN LI G  K G++  A  +  E+     +P
Sbjct: 1063 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 1122

Query: 216  NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
            N +TY  ++        ++  L +L  M+  G   +   Y T++    K  + + A   +
Sbjct: 1123 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 1182

Query: 276  EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            E+M  + + +  ++Y  LI+  CK G L+ A  L+  M K G   D  T++ LI+G C+ 
Sbjct: 1183 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 1242

Query: 336  GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
            GNIK A+  +  M + G   N   Y+ ++    + G +  A+ V+  M       D FT 
Sbjct: 1243 GNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC 1302

Query: 392  SSMVHNLCKAKRLPSASKLL 411
            + +V +LC+  +L  A K L
Sbjct: 1303 NVLVSSLCRDGKLGEAEKFL 1322



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 205/441 (46%), Gaps = 7/441 (1%)

Query: 17   FCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK  + E A+ ++ + +R+  ++   + Y +LID  C+    D    ++  M + G++P
Sbjct: 1169 LCKHEKFELAKRLL-ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 1227

Query: 76   DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            DV+TY+SLI G  R   +  + +++  M   G+  +   Y++L++   Q G   EA +V+
Sbjct: 1228 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 1287

Query: 136  QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
              M C        T N++++ LC++     A +    + + G VP  +TY+ +I G    
Sbjct: 1288 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 1347

Query: 196  GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            G    A     ++   G  P+  TY +++K   +        + L+ +       D   Y
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 1407

Query: 256  CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK-LEAAYLLLDEME 314
             T++A   K G L EA    ++MV + V  D  +Y++L+   C++GK + A  L    M 
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467

Query: 315  KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +     +   +T L+DGL KAG+ K A    E M K G   +  A+N I+D   + G++ 
Sbjct: 1468 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 1527

Query: 375  HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
             A + F +M       +  TY+ ++H   K + L     L  + ++ G+   K    +++
Sbjct: 1528 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 1587

Query: 431  DGLRHSGCRREAKKIQSKIRM 451
             GL  SG      K+  K+ M
Sbjct: 1588 LGLSKSGIPDLGVKLLGKMIM 1608



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 185/402 (46%), Gaps = 5/402 (1%)

Query: 3    GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            G + + + N  +   CK+  L +A A+    ++  VLPD  TY+ L+   C+        
Sbjct: 1400 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 1459

Query: 63   TIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +    M    + P+ V Y  L+ G ++      +    +EM++ G  PD  ++N+++  
Sbjct: 1460 CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 1519

Query: 122  LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
              + G+  +AN  F  M    + P  AT+NI+L+G  K +     L ++  + + G  P+
Sbjct: 1520 CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 1579

Query: 182  LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
             +T++ LI GL K+G       +L ++   G   +  T+  ++     + K +   ++++
Sbjct: 1580 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 1639

Query: 242  AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
             M   G   D   Y  +     K    +E+T  + +M+ +GV      Y TLIN  C+ G
Sbjct: 1640 FMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVG 1699

Query: 302  KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             ++ A+ L DEME  GF   +   + ++ GL   G  + A L L++M ++     +  + 
Sbjct: 1700 DIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFT 1759

Query: 362  CIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 399
             ++ R  +D KI  A+ +   ME+     D   Y+ ++  +C
Sbjct: 1760 TLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMC 1801



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 223/515 (43%), Gaps = 75/515 (14%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-------FVSFD---- 59
            N+ V + C+  +L +AE  +    R+G++P+ +TY+ +I+ Y         F  FD    
Sbjct: 1303 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 1362

Query: 60   ------------------------AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
                                         LNR+     + D V YN+L+A   ++  L  
Sbjct: 1363 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 1422

Query: 96   SLDLLDEMLEMGIPPDVWSYNSLMH------------CLF-------------------- 123
            ++ L D+M++  + PD ++Y+SL+             CLF                    
Sbjct: 1423 AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 1482

Query: 124  ----QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
                + G P  A   F++M+     P T  FN +++   +      A   F  ++  G  
Sbjct: 1483 DGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVC 1542

Query: 180  PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            P L TYNIL+ G  K   L     +   +   G  P+ +T+ +++    ++    LG+++
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 1602

Query: 240  LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            L  M  +G   D F +  +I  + + G++++A D +  M T GV  D  +YN + N   K
Sbjct: 1603 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 1662

Query: 300  EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            +     + ++L EM + G       +  LI+G+C+ G+I+GA    + M  +GF S+  A
Sbjct: 1663 KSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 1722

Query: 360  YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
             + +V  L   GK + A+ V + M     +    T+++++H  C+  ++  A KL     
Sbjct: 1723 ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1782

Query: 416  KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              G+++   A   ++ G+  +G    A ++  ++R
Sbjct: 1783 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR 1817



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 39/335 (11%)

Query: 115  YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
            ++ L+    + G  D A   F+ +      P   T N++L  + K++ T+    +FR + 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 175  KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
              G  P + T+NILI GLC  G L+ A  +LK++ ++G  P  +TY T++          
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN--------- 1027

Query: 235  LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
                                YC       K GR K A + ++ M+  G++ D+ +YN  I
Sbjct: 1028 -------------------WYC-------KKGRYKAAIELIDYMICKGIEADVCTYNVFI 1061

Query: 295  NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
            +  C   +   AYLLL +M K+    ++ T+  LI+G  K G I  A      M+K    
Sbjct: 1062 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 1121

Query: 355  SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
             N   YN ++      G  + A+ + + ME      +  TY ++++ LCK ++   A +L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181

Query: 411  LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            L     + + +   A   ++DGL  +G   EA ++
Sbjct: 1182 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 1216



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 154/349 (44%)

Query: 19   KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
            KA   + A     + ++ G  PD V +N +ID+  +           + MR  G+ P++ 
Sbjct: 1487 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 1546

Query: 79   TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            TYN L+ G ++   L   L L   M+  GI PD  +++SL+  L + G PD   ++   M
Sbjct: 1547 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 1606

Query: 139  ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
            I         TFNI++N   ++     A  +   +   G  P+  TYN +  GL K    
Sbjct: 1607 IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 1666

Query: 199  RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
            R +  +L E+ ++G  P    Y T++    R    +   ++   M+  G+         +
Sbjct: 1667 RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 1726

Query: 259  IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
            +   +  G+ ++A   ++ M+   +   I ++ TL++ +C++ K+  A  L   ME  G 
Sbjct: 1727 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGL 1786

Query: 319  ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            + D   + +LI G+C  G+   A    E M       N+  Y  +VD +
Sbjct: 1787 KLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 1/248 (0%)

Query: 1    MFGKLSTRL-LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
            M G L+ +   NI +  + ++ ++ KA  ++     LGV PD  TYN + +   +  +F 
Sbjct: 1608 MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFR 1667

Query: 60   AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
                +L+ M E G+ P    Y +LI G  R   +  +  L DEM  +G      + ++++
Sbjct: 1668 ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 1727

Query: 120  HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
              L   GK ++A  V   M+   L P  ATF  +++  C++     AL++   ++  G  
Sbjct: 1728 RGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLK 1787

Query: 180  PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
             ++V YN+LI G+C  G    A  + +E+      PN  TY  ++           G ++
Sbjct: 1788 LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1847

Query: 240  LSAMKRKG 247
            L+ ++ +G
Sbjct: 1848 LTDLQERG 1855



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 290  YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
            ++ LI +Y KEG ++ A    + +   GF+   YT  +++  + K    +        M+
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 350  KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
              G   N+  +N +++ L  +G +  A N+ + ME    V    TY+++++  CK  R  
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 406  SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            +A +L+   +  G+          +D L  +    +A  +  K+R   IS
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 1086


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 173/331 (52%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + +  +   CK   + +A  +  +    G+  DVVTY+ LI  +C          
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +LN M    I+PDV TY  L+    +   +  +  +L  ML+  + PDV++YN+LM+   
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYL 563

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + +  +A  VF  M    +TP   T+ I++NG CK++  D AL +F+ + +   VP+ V
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTV 623

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ L+ GLCK+GR+     ++ E+ D G   + ITY +++    +N      + + + M
Sbjct: 624 TYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKM 683

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +G   + F +  ++    K GRLK+A +  + ++T G  LD+  YN +I  +CK+G L
Sbjct: 684 KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLL 743

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           E A  +L +ME+ G   +  T  I+I+ L K
Sbjct: 744 EEALTMLSKMEENGCIPNAVTFDIIINALFK 774



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 219/478 (45%), Gaps = 38/478 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   CK  ++++A++++   ++  V  +V+TY+ L+D Y           + N M  
Sbjct: 207 NILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSL 266

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--------------------------- 103
            G++PDV +YN +I G  +   +  +L+L  EM                           
Sbjct: 267 MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTA 326

Query: 104 ------LEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                 LE+ GI PD+++ N L++C   +G+      V   ++     P T T N ++ G
Sbjct: 327 VSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKG 386

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC       AL     L   GF    V+Y  LI G+CK G  R A  +L+++      PN
Sbjct: 387 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 446

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y+TI+    + +       + S M  KG + D   Y T+I  F  +G+LKEA   + 
Sbjct: 447 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN 506

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV   +  D+ +Y  L++   KEGK++ A  +L  M K   + D +T+  L++G     
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVY 566

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +K A+     M+ +G   ++  Y  +++   K   +D A+N+F+ M     V D+ TYS
Sbjct: 567 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYS 626

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           S+V  LCK+ R+     L+      G         +++DGL  +G   +A  + +K++
Sbjct: 627 SLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 208/419 (49%), Gaps = 6/419 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T N+LI+ +C       G+++L ++ + G  P  VT N+LI G      +  +
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
           L   D++L  G   +  SY +L++ + ++G    A ++ +  I G LT P    ++ +++
Sbjct: 397 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK-IDGRLTKPNVEMYSTIID 455

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK +    A  +F  +   G   ++VTY+ LI G C  G+L+ A  +L E+      P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TYT ++    +  K K    +L+ M +     D F Y T++  ++ +  +K+A    
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M   GV  D+ +Y  LIN +CK   ++ A  L  EM ++    D  T++ L+DGLCK+
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G I      ++ M   G  +++  YN ++D L K+G +D AI +F  M+ +    ++FT+
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  LCK  RL  A ++    L  G  +       ++ G    G   EA  + SK+ 
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 207/423 (48%), Gaps = 15/423 (3%)

Query: 31  IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN 90
           IDG RL   P+V  YN +IDA C++      Y + + M   GIS +VVTY++LI G    
Sbjct: 124 IDG-RLAK-PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIV 181

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             L  +L LL+ M+   I P+V +YN L+  L + GK  EA  V   M+   +     T+
Sbjct: 182 GKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITY 241

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           + +++G         A  +F  +   G  P++ +YNI+I G CK  R+  A  + KE+  
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL 301

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           S   P  I +  I+    + + Y   + +   ++ KG   D F    +I  F  +G++  
Sbjct: 302 SRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
               + +++  G     V+ NTLI   C +G+++ A    D++  QGF+ ++ ++  LI+
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           G+CK G+ +GA   L  ++      N+E Y+ I+D L K   +  A  +F  M VK    
Sbjct: 421 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 480

Query: 387 DSFTYSSMVHNLCKAKRLPSA----SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           D  TYS++++  C   +L  A    ++++L  +   VR        +VD L   G  +EA
Sbjct: 481 DVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVR----TYTILVDALGKEGKVKEA 536

Query: 443 KKI 445
           K +
Sbjct: 537 KSV 539



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 181/384 (47%), Gaps = 39/384 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V  Y+ +IDA C++      Y + + M   GIS DVVTY++LI G      L  ++ L
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM+   I PDV +Y  L+  L + GK  EA  V   M+   + P   T+N ++NG   
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +F  +   G  P++ TY ILI G CK+  +  A  + KE+      P+ +T
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
                                              Y +++    K GR+    D +++M 
Sbjct: 625 -----------------------------------YSSLVDGLCKSGRISYVWDLIDEMR 649

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D+++YN+LI+  CK G L+ A  L ++M+ QG   + +T TIL+DGLCK G +K
Sbjct: 650 DRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A+   + +   G+  ++  YN ++    K G ++ A+ +   ME    + ++ T+  ++
Sbjct: 710 DAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIII 769

Query: 396 HNLCKAKRLPSASKLLLSCLKSGV 419
           + L K      A KLL   +  G+
Sbjct: 770 NALFKKDENDKAEKLLRQMIARGL 793



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 117/239 (48%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P T T N ++ GLC       AL     L   GF    V+Y  LI G+C+ G  R A   
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           L+++      PN   Y TI+    + +       + S M  KG + +   Y T+I  F  
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           +G+LKEA   +  MV   +  ++ +YN L++  CKEGK++ A  +L  M K   + +  T
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           ++ L+DG      +K A+     M+ +G   ++ +YN +++   K  ++D A+N+F+ M
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 10/218 (4%)

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +L ++   G+ P+ +T  T++K      + K  L     +  +G+  +   Y T+I    
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           +IG  + A  ++ ++     + ++  YNT+I+  CK   +  AY L  EM  +G   +  
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T++ LI G C  G +K A   L  M     + N+  YN +VD L K+GK+  A +V   M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 384 E---VKDS-FTYSS------MVHNLCKAKRLPSASKLL 411
               VK +  TYS+      +V+ + KA+ + +A  L+
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 267



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ R+     +I +    G   DV+TYN LID  C+    D    + N+M++ GI P+
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T+  L+ G  +   L  + ++  ++L  G   DV+ YN +++   + G  +EA  +  
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
            M      P   TF+I++N L K    D A ++ R +   G +
Sbjct: 752 KMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 4/208 (1%)

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +N    + L +L+ + ++GY  D     T+I      G++KEA  + ++++  G QL+ V
Sbjct: 40  QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           SY TLIN  C+ G   AA   L +++ +  + +   +  +ID LCK   +  A      M
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
              G  +N+  Y+ ++      GK+  A+ +   M +K    +  TY+ +V  LCK  ++
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDG 432
             A  +L   LK+ V+        ++DG
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDG 247


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 163/317 (51%), Gaps = 3/317 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T  LNI + +FC  NRL  A +++ D ++LG  P   T+  LI   C          + 
Sbjct: 44  NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 103

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M   G  PDV+TY +LI G  ++  L+ +L L  +ML  GI P+ ++Y+SL+H L  L
Sbjct: 104 DKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCIL 163

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN---RYTDNALRMFRGLQKHGFVPEL 182
           G   EA R+F  MI   + P   TFN +++ LCK    +  D A+ +F  + + G +P+ 
Sbjct: 164 GHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDT 223

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VTYN LI GLC  GRLR A  +  E+   G  P+ +TY  +     +N +    + +L  
Sbjct: 224 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 283

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++      D   Y  V+    + G L+ A D   ++ + G+  D+ +Y  +IN  C++G 
Sbjct: 284 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 343

Query: 303 LEAAYLLLDEMEKQGFE 319
           L  A  L  EM++   E
Sbjct: 344 LAEASKLFGEMDENDIE 360



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 10/352 (2%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           RMR     P +V ++ L+   TR    S  L L  +M   GIP + ++ N L++    L 
Sbjct: 3   RMRPP---PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +   A  V  D++     P TATF  ++ GLC       AL++F  +   GF P+++TY 
Sbjct: 60  RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK  +L  A  +  ++   G +PN  TY++++        +K  + +  AM  +
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 247 GYTFDGFGYCTVIAAFVKIGRLK---EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
               D   + T++ A  K G ++   +A    E+M   G+  D V+YNTLI+  C  G+L
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L  EM   G   D  T+ IL D LCK   +  A + L+ +     D ++  Y+ +
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +D + + G+++ A ++F  +  K    D  TY+ M++ LC+   L  ASKL 
Sbjct: 300 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 351



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 173/369 (46%), Gaps = 38/369 (10%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+  +  T N+LI+++C        +++L  + + G  P   T+ +LI G      +  
Sbjct: 39  FGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGE 98

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M   G  PDV +Y +L++ L +  +  EA  +F DM+   ++P   T++ +++
Sbjct: 99  ALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 158

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT---ARWILKELGDSG 212
           GLC   +   A+R+F  +     +P+ +T+N L+  LCK G ++    A  + +E+   G
Sbjct: 159 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQG 218

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ +TY                                    T+I     +GRL++A 
Sbjct: 219 LIPDTVTYN-----------------------------------TLIHGLCHVGRLRDAI 243

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +MV  G   D+V+Y  L +  CK  +L  A +LL  +E    + D + ++I++DG+
Sbjct: 244 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 303

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 392
           C+AG ++ AR     ++  G   ++  Y  +++ L + G +  A  +F  M+  D  +YS
Sbjct: 304 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYS 363

Query: 393 SMVHNLCKA 401
           +   N  K 
Sbjct: 364 TFSRNAFKG 372



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 160/350 (45%), Gaps = 7/350 (2%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           ML M  PP +  ++ L+  + ++        +++ M    +   T T NI++N  C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A  +   + K G+ P   T+  LI+GLC  G++  A  +  ++   G  P+ +TY T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    ++R+    L + S M  KG + + F Y ++I     +G  KEA      M+   
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 283 VQLDIVSYNTLINLYCKEGKLE---AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           +  D +++NTL++  CKEG ++    A  L +EM +QG   D  T+  LI GLC  G ++
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A      M   G   +L  Y  + D L K+ ++  A+ + + +E      D   YS ++
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 300

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +C+A  L +A  L       G+         +++GL   G   EA K+
Sbjct: 301 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 350


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 219/477 (45%), Gaps = 57/477 (11%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C+A ++EKA  +  +   +GV+PDV TY +LID++C+    +   +  + M   G
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP VVTY +L+    +   +  + D+   M++ G  P+  +Y++L+  L + G+  +A 
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580

Query: 133 RVFQDMI----------------CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V+  MI                   + P   T+  +++GLCK     +A  +   +  +
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI G CK G+L  A+ +   +   G+ P   TYT+++   F++R+  L 
Sbjct: 641 GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 700

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M     T +   Y  +I    +IG  ++A   +  M   G   ++V+Y +LI+ 
Sbjct: 701 IKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDG 760

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK------ 350
             K GK++ +  L  +M  QG   +  T+ +LI+  C AG +  A   L  M +      
Sbjct: 761 LGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKY 820

Query: 351 ------------------IGFDSNLEA---------YNCIVDRLGKDGKIDHAINVF-ES 382
                             +G    LE+         Y  ++D   K G+++ A+ +  E 
Sbjct: 821 VQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEM 880

Query: 383 MEVKDSF------TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           MEV  S       TY+S++  LC A +L  A +L     + GV    SA   ++ GL
Sbjct: 881 MEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 205/447 (45%), Gaps = 26/447 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   +  G  P+   +N L+ +YC    +   Y +LNRM   G  P 
Sbjct: 319 FLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPG 378

Query: 77  VVTYN----SLIAGATRNS--LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            V YN    S+ +G    S  LL+ +  + +EML      +  +  +   CL  +GK D+
Sbjct: 379 YVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDK 438

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + M+     P T+T++ ++  LC+    + A  +F+ ++  G +P++ TY ILI 
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK G +  AR    E+   G +P+ +TYT ++    + ++     +I   M   G   
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP 558

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMV----------------TDGVQLDIVSYNTLI 294
           +   Y  ++    K G  ++A +   +M+                TD +  ++V+Y  LI
Sbjct: 559 NTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALI 618

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK  K+  A  LLD M   G E +   +  LIDG CK G +  A+     M+K G+ 
Sbjct: 619 DGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
             +  Y  ++D + KD ++D AI V     ES    +  TY++M+  LC+      A KL
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSG 437
           L    K G         +++DGL  SG
Sbjct: 739 LSMMEKRGCNPNVVTYTSLIDGLGKSG 765



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 5/349 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           + P+VVTY  LID  C+         +L+ M   G  P+ + Y++LI G  +   L  + 
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++   M + G  P V +Y SL+  +F+  + D A +V   M+    TP   T+  M++GL
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGL 726

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           C+      AL++   ++K G  P +VTY  LI GL K+G++  +  +  ++   G APN 
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY  ++  C           +LS MK+  +     GYC+V+  F K  +   +   +E+
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEE 844

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD---KYTHTILIDGLCK 334
           + + G+      Y  LI+ + K G+LE A  L  EM +     +   K T+T LI  LC 
Sbjct: 845 LESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCL 904

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           A  ++ A      + + G    L A+ C++  L K  K + A+ +  SM
Sbjct: 905 ASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 188/504 (37%), Gaps = 60/504 (11%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           RLLN+ V   C+     KA   +      G  P   TYN L+         D G+ +   
Sbjct: 173 RLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKE 232

Query: 68  MREAGISPDVVTY--------------------------------NSLIAGATRNSLLSC 95
           M E G   D  T                                   +I+G    SL   
Sbjct: 233 MSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDE 292

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++  L  M      P+V +Y +L+    +  +     R+   M+     P  + FN +++
Sbjct: 293 AISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVH 352

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT------ARWILKELG 209
             C  R    A ++   +   G  P  V YNI I  +C    L +      A  + +E+ 
Sbjct: 353 SYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEML 412

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            S    N +      +C     K+    +I+  M RKG+  D   Y  VI    +  +++
Sbjct: 413 ASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A    ++M + GV  D+ +Y  LI+ +CK G +E A    DEME  G      T+T L+
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALL 532

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM------ 383
               K   +  A      M   G   N   Y+ +VD L K G+   A  V+  M      
Sbjct: 533 HAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDN 592

Query: 384 ---------EVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
                    E  DS      TY +++  LCKA ++  A +LL     +G         A+
Sbjct: 593 VGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDAL 652

Query: 430 VDGLRHSGCRREAKKIQSKIRMAK 453
           +DG    G    A+++    RM+K
Sbjct: 653 IDGFCKVGKLDNAQEV--FFRMSK 674



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 36/303 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L+ A+ +     + G LP V TY  LIDA  +    D    +L++M E+  +P+
Sbjct: 656 FCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPN 715

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY ++I G  R      +L LL  M + G  P+V +Y SL+  L + GK D + ++F 
Sbjct: 716 VVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFT 775

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNA------------------------------ 166
            MI     P   T+ +++N  C     D A                              
Sbjct: 776 QMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKF 835

Query: 167 ---LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI---TY 220
              L +   L+ HG V     Y +LI    KAGRL  A  + KE+ +   + N     TY
Sbjct: 836 IASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTY 895

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T++++      + +   E+ S + RKG   +   +  +I   +K+ +  EA      M  
Sbjct: 896 TSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCD 955

Query: 281 DGV 283
           +GV
Sbjct: 956 EGV 958



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 8/256 (3%)

Query: 161 RYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           R  +  +R F   ++  G+      YN L + L    R RT   +L+E+G+         
Sbjct: 115 RTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRL 174

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
              I++ C R+  +   LE L  +K  GY   G  Y  ++      G++       ++M 
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS 234

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D  +        CKEG+   A +++   E++ F+ D    T +I GL +A    
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMI---EREDFKLDTVLCTQMISGLMEASLFD 291

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A   L  M       N+  Y  ++    K  ++     +   M  +    +   ++S+V
Sbjct: 292 EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLV 351

Query: 396 HNLCKAKRLPSASKLL 411
           H+ C A+  P A KLL
Sbjct: 352 HSYCNARDYPYAYKLL 367



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/353 (19%), Positives = 132/353 (37%), Gaps = 54/353 (15%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           YN+L   L    +     R+ +++   D        N+++   C++     AL     L+
Sbjct: 140 YNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLK 199

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G+ P   TYN L++ L  AG++     + KE+ + G   +  T     +   +  ++ 
Sbjct: 200 DFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWS 259

Query: 235 LGLEILSAMKRKGYTFDG-----------------------------------FGYCTVI 259
              + L  ++R+ +  D                                      Y T++
Sbjct: 260 ---DALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 316

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           A F+K  +L      +  M+ +G   +   +N+L++ YC       AY LL+ M   G  
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCP 376

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD--------- 370
                + I I  +C    +    L L    K+     + A +C+++++            
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDL-LALAEKVY--EEMLASSCVLNKVNTANFARCLCGM 433

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           GK D A  + + M     V D+ TYS ++  LC+A ++  A  L       GV
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 486


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 206/442 (46%), Gaps = 4/442 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K   + KA  +  + ++ G+ PD VTY+ ++ A C+  + D     L +M   G+ P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G +       ++ +  EM    I PDV + + LM  L + GK  EA  VF 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   ++ IMLNG        +   +F  +   G  P++ T+N+LIK     G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  I  E+ D G  P+ +TY T++    R  K    +E  + M  +G   D + Y 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F   G L +A + + +++ +G+ LDIV ++++IN  CK G++  A  + D     
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G       +++L+DG C  G ++ A    + M   G + N   Y  +V+   K G+ID  
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++F  M  K     +  Y+ ++  L +A R   A        +SG+ + K     V+ G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRG 648

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
           L  + C  EA  +  ++R   +
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNV 670



 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 204/422 (48%), Gaps = 4/422 (0%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  +LPDVVT +ML+ + C++        + + M   G +P+V +Y  ++ G      L 
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              DL D ML  GI PD++++N L+      G  D+A  +F +M    + P   T+  ++
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             LC+    D+A+  F  +   G  P+   Y+ LI+G C  G L  A+ ++ E+ ++G  
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + + +++I+    +  +      I       G       Y  ++  +  +G++++A   
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + MV+ G++ + V Y TL+N YCK G+++    L  EM ++G +     + I+IDGL +
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFT 390
           AG    A++    M + G   N   YN ++  L K+   D AI +F+   +M VK +  T
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++M+  + + +R+  A  L  S  +SG+         ++  L   G   EA+ + S ++
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736

Query: 451 MA 452
            A
Sbjct: 737 NA 738



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 196/425 (46%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  +++  N L+  +C+    D    IL +R  E G 
Sbjct: 121 CT--RAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGC 178

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y+ L+           + DLL  M E G    PDV +Y++++   F+ G  ++A
Sbjct: 179 VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKA 238

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T++ +++ LCK R  D A    R +   G +P   TYN LI G
Sbjct: 239 CDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T + +M    +  K K   ++   M  KG   +
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  DI ++N LI  Y   G L+ A ++ +
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G + D  T+  +I  LC+ G +  A      M   G   +  AY+C++      G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A  +   +       D   +SS+++NLCK  R+  A  +    +  G+        
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 428 AVVDG 432
            ++DG
Sbjct: 539 MLMDG 543



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 170/397 (42%), Gaps = 35/397 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +  +     L+KA  I  +    GV PDVVTY  +I A C+    D      N+M 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 70  EAGISPDVVTYNSLIAG-ATRNSLLS---------------------------CSL---- 97
           + G++PD   Y+ LI G  T  SLL                            C L    
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 98  ---DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              ++ D  + +G+ P    Y+ LM     +GK ++A RVF  M+   + P    +  ++
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D  L +FR + + G  P  + YNI+I GL +AGR   A+    E+ +SG A
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N  TY  +++  F+NR +   + +   ++      +     T+IA   +  R++EA D 
Sbjct: 637 MNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              +   G+   +V+Y+ +I    KEG +E A  +   M+  G E D      ++  L K
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
              I  A  +L  +++  F         +VD     G
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 185/417 (44%), Gaps = 5/417 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T+N+LI AY      D    I N MR+ G+ PDVVTY ++IA   R   +  +
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++  ++M++ G+ PD ++Y+ L+      G   +A  +  +++   +      F+ ++N 
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A  +F      G  P  V Y++L+ G C  G++  A  +   +  +G  PN
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y T++    +  +   GL +   M +KG       Y  +I    + GR   A     
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+ ++  +YN ++    K    + A  L  E+     + +  T   +I G+ +  
Sbjct: 629 EMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTR 688

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A+     +++ G    +  Y+ ++  L K+G ++ A ++F SM+      DS   +
Sbjct: 689 RVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 748

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG-CRREAKKIQSK 448
            +V  L K   +  A   L    +    +       +VD     G CR   + + +K
Sbjct: 749 HVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAK 805



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 169/384 (44%), Gaps = 42/384 (10%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P   +Y  LM C  +  +P+ A   F  ++   L       N +L G C+ + TD AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +Y+IL+K LC  G+   A  +L+ + + G   +P+ + Y+T++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV  GV 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +  +YN LI  Y   G+ + A  +  EM +     D  T ++L+  LCK G IK AR  
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 345 LEYMNKIGFDSNLEAYN----------CIVDR-----------LGKD------------- 370
            + M   G + N+ +Y           C+VD            +  D             
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406

Query: 371 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK D  TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ G    G   +AK++ S+I
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEI 490



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 155/332 (46%), Gaps = 3/332 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L KA+ +I + +  G+  D+V ++ +I+  C+         I +     G+ P 
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y+ L+ G      +  +L + D M+  GI P+   Y +L++   ++G+ DE   +F+
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P T  +NI+++GL +   T  A   F  + + G      TYNI+++GL K  
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNR 653

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A ++ KEL       N IT  T++   F+ R+ +   ++ +++ R G       Y 
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   +K G ++EA D    M   G + D    N ++    K+ ++  A   L +++++
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            F  +  T  +L+D     G     R H+ ++
Sbjct: 774 NFSLEHLTTMLLVDLFSSKGT---CREHIRFL 802



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L NI +    +A R   A+    +    G+  +  TYN+++    +   FD    
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF 660

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +R   +  +++T N++IAG                                   +F
Sbjct: 661 LFKELRAMNVKINIITLNTMIAG-----------------------------------MF 685

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  + +EA  +F  +    L PC  T++IM+  L K    + A  MF  +Q  G  P+  
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             N +++ L K   +  A   L ++ +   +   +T
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 4/410 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++   N  +  FCK   + +A  ++ +    G+LPDV +Y++LI+A+C          +
Sbjct: 389 LNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDL 448

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M  + I P +V+Y SLI G  + ++L  ++D+   +       D   Y +L+     
Sbjct: 449 MEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCM 508

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D A ++ ++MIC +L P   +   ++ G  K    D AL +F  + + G  P+ + 
Sbjct: 509 QGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIA 568

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
            N ++ G C+AG  + A  +L++  + G   N  +Y  I+    +    +  LE+L  M 
Sbjct: 569 CNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRML 628

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           ++        Y T+I+ F K    K A +   +MV  G+  +I +Y  L++++    K+ 
Sbjct: 629 KRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMH 688

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            AY +  EM+++G   D+ ++T LI G C    +K A    E M++ G   N+  Y CI+
Sbjct: 689 EAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
           D   K  +ID A  VF+ M     + D  TY+ ++    K      A KL
Sbjct: 749 DGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKL 798



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 195/469 (41%), Gaps = 43/469 (9%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY----T 63
           R  N  +    +ANR+E    +  +    G  P++ TY ++++ YC  V  DAG      
Sbjct: 283 RTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAV 342

Query: 64  ILNRMREAGISPDVVTYNSLIAGA------------------TRNSLLSCS--------- 96
           IL ++  +G  P VVTY++ I G                   T   L S S         
Sbjct: 343 ILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFC 402

Query: 97  --------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
                   L +L+EM   GI PDV+SY+ L++     G   +   + ++M    + P   
Sbjct: 403 KRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIV 462

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           ++  +++GLCK     NA+ +F  +       +   Y  LI G C  G + +A  +L+E+
Sbjct: 463 SYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEM 522

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             +   P A +  ++++  ++   +   LE+ +AM R G   D      ++    + G  
Sbjct: 523 ICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYF 582

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           KEA   +E     G  L+  SYN +I   CKEG  E A  LL  M K+        ++ L
Sbjct: 583 KEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTL 642

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I G  K  N K A      M K+G   N+  Y  ++       K+  A  +F+ M+ +  
Sbjct: 643 ISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGL 702

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             D  +Y++++   C  + +  A  L     + G          ++DG 
Sbjct: 703 CLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGF 751



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/453 (21%), Positives = 205/453 (45%), Gaps = 8/453 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  + ++ +  F   + LE A  +  +   +G+ PD+ T N L+    +    +    + 
Sbjct: 246 SGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVF 305

Query: 66  NRMREAGISPDVVTY----NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +++ G SP++ TY    N   +    ++ +  +  +L ++   G  P V +Y++ +H 
Sbjct: 306 EELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHG 365

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L ++G  + A  + +++   +    + +FN ++ G CK      AL++   ++  G +P+
Sbjct: 366 LCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPD 425

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + +Y+ILI   C  G +     +++E+  S   P+ ++YT+++    +    +  ++I  
Sbjct: 426 VYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFH 485

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           ++      +D   Y T+I  F   G +  A   +E+M+ + +     S  +LI  Y K G
Sbjct: 486 SIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLG 545

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             + A  + + M + G   D      ++DG C+AG  K A   LE   + GF+ N  +YN
Sbjct: 546 LFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYN 605

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            I+ +L K+G  + A+ +   M  ++       YS+++    K      A  L    +K 
Sbjct: 606 AIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKV 665

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           G+    +    ++    HS    EA  I  +++
Sbjct: 666 GITFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 104/219 (47%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    N  +   CK    E+A  ++   ++  VLP VV Y+ LI  + +  +F     +
Sbjct: 599 LNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNL 658

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             RM + GI+ ++ TY  L++  + +  +  +  +  EM E G+  D  SY +L+     
Sbjct: 659 FTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCN 718

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +  +A  +F++M     +P   T+  +++G CK+   D A  +F  + +   +P++VT
Sbjct: 719 NREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVT 778

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           Y +LI    K G    A  +   + D G  P+ IT+  +
Sbjct: 779 YTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 58/267 (21%)

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
           HGF   +  + I++     AG +R   W L  L D     N   Y T          +  
Sbjct: 186 HGFSHSISCFRIIVHAFALAG-MRLEVWAL--LRDIVGFCNEAKYDTF-------ELFSA 235

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            L+    ++R G  FD      +I+ F     L+ A D        G++ DI + N L+ 
Sbjct: 236 FLDSPQHVERSGVVFD-----VLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLK 290

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL--------------------------- 328
              +  ++E    + +E++ +G   + YT+TI+                           
Sbjct: 291 CLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRS 350

Query: 329 ------------IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                       I GLCK GN++ A + +  ++      N  ++N ++    K G++  A
Sbjct: 351 GEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEA 410

Query: 377 INVFESME----VKDSFTYSSMVHNLC 399
           + V E M+    + D ++YS +++  C
Sbjct: 411 LQVLEEMKSSGILPDVYSYSILINAFC 437


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 195/374 (52%), Gaps = 3/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+ +R   A +++   ++ G  PDVVT + LI+ +CQ         ++++M E
Sbjct: 49  NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 108

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PDVV YN++I G+ +  L++ +++L D M   G+  D  +YNSL+  L   G+  +
Sbjct: 109 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 168

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+ +DM+  D+ P   TF  +++   K      A++++  + +    P++ TYN LI 
Sbjct: 169 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 228

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GR+  A+ +L  +   G  P+ +TY T++    ++++   G ++   M ++G   
Sbjct: 229 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 288

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  + + GR   A +   +M +   + +I +Y+ L+   C   ++E A +L 
Sbjct: 289 DTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLF 345

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M+K   E D  T+ I+I G+CK GN++ A      ++  G   ++ +Y  ++    + 
Sbjct: 346 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 405

Query: 371 GKIDHAINVFESME 384
            + D +  ++  M+
Sbjct: 406 RQWDKSDLLYRKMQ 419



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 191/384 (49%), Gaps = 44/384 (11%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+ +YN++I+  C+   F    +++ +M + G  PDVVT +SLI G  + + +  +
Sbjct: 40  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +DL+ +M EMG  PDV  YN++                                   ++G
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTI-----------------------------------IDG 124

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    ++A+ +F  +++ G   + VTYN L+ GLC +GR   A  +++++      PN
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 184

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+T ++    +  K+   +++   M R+    D F Y ++I      GR+ EA   ++
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MVT G   D+V+YNTLIN +CK  +++    L  EM ++G   D  T+  +I G  +AG
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 304

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A+   E  +++    N+  Y+ ++  L  + +++ A+ +FE+M+      D  TY+
Sbjct: 305 RPDAAQ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 361

Query: 393 SMVHNLCKAKRLPSASKLL--LSC 414
            ++H +CK   +  A  L   LSC
Sbjct: 362 IVIHGMCKIGNVEDAWDLFRSLSC 385



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 38/337 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+ NR+  A  ++     +G  PDVV YN +ID  C+    +    + +RM   G+  D
Sbjct: 90  FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 149

Query: 77  VVTYNSLIAGA-----------------------------------TRNSLLSCSLDLLD 101
            VTYNSL+AG                                     +    S ++ L +
Sbjct: 150 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 209

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM    + PDV++YNSL++ L   G+ DEA ++   M+     P   T+N ++NG CK++
Sbjct: 210 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 269

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   ++FR + + G V + +TYN +I+G  +AGR   A+ I   + DS   PN  TY+
Sbjct: 270 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-DS--RPNIRTYS 326

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++     N + +  L +   M++     D   Y  VI    KIG +++A D    +   
Sbjct: 327 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 386

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           G++ D+VSY T+I+ +C++ + + + LL  +M++ G 
Sbjct: 387 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 423



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 38/397 (9%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V ++ ++    +  ++D   ++ + M   GI  D+ +YN +I    R S    +L 
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           ++ +M++ G  PDV + +SL++   Q  +  +A  +   M      P    +N +++G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    ++A+ +F  +++ G   + VTYN L+ GLC +GR   A  +++++      PN I
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+T                                    VI  FVK G+  EA    E+M
Sbjct: 187 TFTA-----------------------------------VIDVFVKEGKFSEAMKLYEEM 211

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
               V  D+ +YN+LIN  C  G+++ A  +LD M  +G   D  T+  LI+G CK+  +
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 271

Query: 339 -KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-TYSSMVH 396
            +G +L  E M + G   +   YN I+    + G+ D A  +F  M+ + +  TYS +++
Sbjct: 272 DEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 330

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            LC   R+  A  L  +  KS + +  +    V+ G+
Sbjct: 331 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 367



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 32/232 (13%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            F K  +  +A  +  +  R  V PDV TYN LI+  C     D    +L+ M   G  P
Sbjct: 194 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVTYN+LI G  ++  +     L  EM + G+  D  +YN+++   FQ G+PD A  +F
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313

Query: 136 --------------------------------QDMICGDLTPCTATFNIMLNGLCKNRYT 163
                                           ++M   ++     T+NI+++G+CK    
Sbjct: 314 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           ++A  +FR L   G  P++V+Y  +I G C+  +   +  + +++ + G  P
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 3/170 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK+ R+++   +  +  + G++ D +TYN +I  Y Q    DA   I +RM  
Sbjct: 259 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 318

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P++ TY+ L+ G   N  +  +L L + M +  I  D+ +YN ++H + ++G  ++
Sbjct: 319 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 375

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           A  +F+ + C  L P   ++  M++G C+ R  D +  ++R +Q+ G +P
Sbjct: 376 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + + R  +I +   C   R+EKA  +  +  +  +  D+ TYN++I   C+  + + 
Sbjct: 316 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 375

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 110
            + +   +   G+ PDVV+Y ++I+G  R      S  L  +M E G+ P
Sbjct: 376 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 31/173 (17%)

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  D+ SYN +IN  C+  +   A  ++ +M K G+E D  T + LI+G C+   +  A
Sbjct: 40  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
              +  M ++GF  ++  YN I+                                  CK 
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTII-------------------------------DGSCKI 128

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             +  A +L     + GVR       ++V GL  SG   +A ++   + M  I
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 198/384 (51%), Gaps = 18/384 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +  FC+ +RL  A +++   ++LG  P +VT+  L+  +C        ++++  M 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++G  P+VV YN+LI G  +N  L+ +L+LL+EM + G+  DV +YN+L+  L   G+  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DM+   + P   TF  +++   K    D A  +++ + +    P  VTYN +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  GRL  A+     +   G  PN +TY T++    + R    G+++   M  +G+ 
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T+I  + ++G+L+ A D    MV+  V  DI+++  L++  C  G++E+A + 
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 310 LDEMEKQGFECDKY----THTILIDGLCKAGNIKGA-----RLHLEYMNKIGFDSNLEAY 360
            D+M     E +KY     + I+I GLCKA  ++ A     RL +E     G   +   Y
Sbjct: 409 FDDMR----ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE-----GVKPDARTY 459

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             ++  L K+G    A  +   M+
Sbjct: 460 TIMILGLCKNGPRREADELIRRMK 483



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 4/438 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F  + R E A A+  + +    LP +V +  L+ A      ++       +M   GIS D
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + ++  LI    R S LS +L +L +M+++G  P + ++ SL+H    + +  +A  +  
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P    +N +++GLCKN   + AL +   ++K G   ++VTYN L+ GLC +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +L+++      P+ +T+T ++    +        E+   M +     +   Y 
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I      GRL +A    + M + G   ++V+YNTLI+ +CK   ++    L   M  +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF  D +T+  LI G C+ G ++ A     +M       ++  +  ++  L  +G+I+ A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405

Query: 377 INVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  F+ M   + +     Y+ M+H LCKA ++  A +L       GV+        ++ G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465

Query: 433 LRHSGCRREAKKIQSKIR 450
           L  +G RREA ++  +++
Sbjct: 466 LCKNGPRREADELIRRMK 483



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 173/343 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  NR+  A +++I  ++ G  P+VV YN LID  C+    +    +LN M + G+  D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+L+ G   +   S +  +L +M++  I PDV ++ +L+    + G  DEA  +++
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   + P   T+N ++NGLC +    +A + F  +   G  P +VTYN LI G CK  
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +     + + +   G   +  TY T++    +  K ++ L+I   M  +  T D   +C
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++      G ++ A    + M      + IV+YN +I+  CK  K+E A+ L   +  +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           G + D  T+TI+I GLCK G  + A   +  M + G    + A
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 35/272 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C + R   A  ++ D ++  + PDVVT+  LID + +  + D    +   M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274

Query: 71  AGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLDLLDE 102
           + + P+ VTYNS+I G                           T N+L+S  C   ++DE
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334

Query: 103 MLEM-------GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            +++       G   D+++YN+L+H   Q+GK   A  +F  M+   +TP   T  I+L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC N   ++AL  F  +++      +V YNI+I GLCKA ++  A  +   L   G  P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +A TYT ++    +N   +   E++  MK +G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   + R   A  +  E+  S   P+ + +T ++      R+Y+  +     M+  G + 
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + +  +I  F +  RL  A   + +M+  G +  IV++ +L++ +C   ++  A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M K G+E +   +  LIDGLCK G +  A   L  M K G  +++  YN ++  L   
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+   A  +   M  +    D  T+++++    K   L  A +L    ++S V       
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 427 KAVVDGLRHSGCRREAKK 444
            ++++GL   G   +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 212/443 (47%), Gaps = 31/443 (6%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T  LN+ +   C + R E A  +       G  P+  ++ +L+  YC+         +L+
Sbjct: 151 TYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLD 210

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G+ P+ V YN+LI+   R      +  L++ M E G+ PDV ++NS +  L   G
Sbjct: 211 GMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAG 270

Query: 127 KPDEANRVFQDMIC----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           K  EA+R+F+DM      G   P   TFN+ML G CK    + A  +   ++++G + EL
Sbjct: 271 KILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMEL 330

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +YNI + GL + G+L  A+  LKE+ D G  PN  ++ T+M    +N        I+  
Sbjct: 331 ESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGL 390

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M   G   D   Y T++      G++ +A + + +M+  G   +  + N L++   KEG+
Sbjct: 391 MISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGR 450

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-------IKGARLH---------LE 346
           +  A  LL +M ++ ++ D  T  I+IDGLCK+G        ++G  +H           
Sbjct: 451 IFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNS 510

Query: 347 YMNKIGFDSN-------LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
           ++  +   SN       L  Y+ I++ L K G++D A   F  M  K    DS  Y + +
Sbjct: 511 FIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFI 570

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
           H+ CK  ++ SA ++L    K G
Sbjct: 571 HSFCKHGKISSAFRVLKDMEKRG 593



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 225/467 (48%), Gaps = 30/467 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +    +  +L +A+  + + +  G+ P++ ++N ++D  C+         I+  M  
Sbjct: 334 NIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMIS 393

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI PD VTY++L+ G      +  + ++L EM+  G  P+ ++ N L+H L++ G+  E
Sbjct: 394 SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------ 178
           A ++ Q M          T NI+++GLCK+   D A+ +  G+  HG             
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIG 513

Query: 179 -----------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
                      +P+L+TY+I+I GLCKAGRL  AR    E+      P++I Y T +   
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            ++ K      +L  M+++G       Y ++I       ++ E    ++ M   G+  +I
Sbjct: 574 CKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            +YN +I+  C+ G+++ A  LLDEM ++G   +  +  +LI   CKA +    +   E 
Sbjct: 634 CTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEI 693

Query: 348 MNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
              I G    L  Y+ + + L   G++  A  +F++   +     +F Y+ ++  LCK +
Sbjct: 694 ALSICGHKEAL--YSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDE 751

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            L +AS +L   +  G R   ++   V+DGL   G + +A ++  ++
Sbjct: 752 MLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERM 798



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 218/476 (45%), Gaps = 37/476 (7%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N+ + +  + ++++    +  D +  GV P+  T N+LI   C    F+    + ++M
Sbjct: 118 LYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKM 177

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G  P+  ++  L+ G  R  L   +L+LLD M   G+ P+   YN+L+    + G+ 
Sbjct: 178 GVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRN 237

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----PELVT 184
           +EA R+ + M    L P   TFN  ++ LC       A R+FR +Q    +    P + T
Sbjct: 238 EEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITT 297

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N++++G CK G L  A+ +++ +  +G+     +Y   +    RN K       L  M 
Sbjct: 298 FNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMV 357

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   + + + TV+    K G + +A   M  M++ G+  D V+Y+TL++  C  GK+ 
Sbjct: 358 DKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVL 417

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L EM ++G   + YT  IL+  L K G I  A   L+ MN+  +D +    N ++
Sbjct: 418 KANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVI 477

Query: 365 DRLGKDGKIDHAINVFESMEV---------------------------KDSFTYSSMVHN 397
           D L K GK+D A+ + E M +                            D  TYS +++ 
Sbjct: 478 DGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIING 537

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           LCKA RL  A K  +  +   +         + D   HS C+    KI S  R+ K
Sbjct: 538 LCKAGRLDEARKKFIEMVGKSLH----PDSIIYDTFIHSFCKH--GKISSAFRVLK 587



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 172/349 (49%), Gaps = 8/349 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP V+ YN ++    +  K D  + +++DM+   ++P T T N+++ GLC +   ++A  
Sbjct: 113 PPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDARE 172

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  +   G  P   ++ IL++G C+AG    A  +L  +G  G  PN + Y T++    
Sbjct: 173 VFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFC 232

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG----VQ 284
           R  + +    ++  M+  G   D   + + I+A    G++ EA+     M  D      +
Sbjct: 233 REGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR 292

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +I ++N ++  +CKEG LE A  L++ M++ G   +  ++ I + GL + G +  A+L 
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLA 352

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L+ M   G + N+ ++N ++D L K+G I  A  +   M       D+ TYS+++H  C 
Sbjct: 353 LKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCS 412

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             ++  A+ +L   ++ G          ++  L   G   EA+K+  K+
Sbjct: 413 TGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKM 461



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 3/270 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CKA RL++A    I+ +   + PD + Y+  I ++C+     + + +L  M +
Sbjct: 532 SIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEK 591

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +  + TYNSLI G    + +     LLD+M E GI P++ +YN+++ CL + G+  +
Sbjct: 592 RGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKD 651

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILI 189
           A  +  +M+   ++P  ++F +++   CK         +F   L   G    L  Y+++ 
Sbjct: 652 ATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEAL--YSLMF 709

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L   G +  A+ +     D         Y  +++   ++   +   +IL  M  KGY 
Sbjct: 710 NELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYR 769

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           FD   +  VI    K G+  +A +  E+M+
Sbjct: 770 FDPASFMPVIDGLGKRGKKHDADELAERMM 799



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 14/222 (6%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  N  +      N++ +   ++ D    G+ P++ TYN +I   C+        ++L
Sbjct: 597 SLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLL 656

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP---PDVWSYNSLMHCL 122
           + M + GISP++ ++  LI    + S       ++ E+ E+ +         Y+ + + L
Sbjct: 657 DEMLQKGISPNISSFRLLIKAFCKAS----DFGVVKEVFEIALSICGHKEALYSLMFNEL 712

Query: 123 FQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              G+  EA  +F   +  C DL      +N ++  LCK+   +NA  +   +   G+  
Sbjct: 713 LIGGEVSEAKELFDAALDRCFDLG--NFQYNDLIEKLCKDEMLENASDILHKMIDKGYRF 770

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGD---SGHAPNAIT 219
           +  ++  +I GL K G+   A  + + + D    G   N IT
Sbjct: 771 DPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKIT 812


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 196/401 (48%), Gaps = 7/401 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+ NR ++A A+  + +    +P+  TY +LI  +      D    +L  M+ +G   +
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V + +L+ G      +  +L+    M +    PDV +Y +L+H L + GK DEA  + +
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC-KA 195
           +M+     P T TF+ +++GLCK    + A R+   + + G       +  +I+ LC K 
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             +  A  +L  +   G  P  + +  ++    + +      ++L  M  KG   + F +
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    K  R+ EA   +E+MV  G   ++V+Y+T+IN  CK+G+++ AY L   ME+
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  TH ILIDGLCKA  I+ AR     M + G   ++  YN ++D L K  ++D 
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390

Query: 376 AINVFESM-----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           A  +F+++        ++ TYS++ H      R+  A ++ 
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 221/476 (46%), Gaps = 44/476 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   CKA + ++A+ ++ + +  G  PD VT++ LID  C+F S +  + +L  + + G+
Sbjct: 133 VHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192

Query: 74  ------------------------------------SPDVVTYNSLIAGATRNSLLSCSL 97
                                               +P V+ +N +I G  +   L  + 
Sbjct: 193 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 252

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LL+ M+E G  P+V+++  L+  L +  +  EA ++ + M+ G  +P   T++ ++NGL
Sbjct: 253 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGL 312

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D+A  +F+ +++    P +VT+NILI GLCKA R+  AR +   + ++G AP+ 
Sbjct: 313 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 372

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEATDYME 276
           ITY +++    ++ +     ++   +   G +  +   Y T+   +  +GR+ +A     
Sbjct: 373 ITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFS 432

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +V  G   D+ +Y +LI  YCK  +      L++EM  +GF     T + ++ GL +  
Sbjct: 433 MLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGN 492

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-------DSF 389
           + + A    + M   G   +   YN +V+ + +  K D A+ V E +  K        S 
Sbjct: 493 HTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSS 552

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              ++V +LC+  +   A +LL    + G     S+   ++ GL       EA ++
Sbjct: 553 AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQV 608



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 207/436 (47%), Gaps = 43/436 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N +E A  ++   I  G  P V+ +N++I+ +C+    D+ Y +L  M E G  P+V 
Sbjct: 209 KYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVF 268

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T+  LI G  + + +  +  LL++M+  G  P+V +Y+++++ L + G+ D+A  +FQ M
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
              +  P   T NI+++GLCK +  + A +++  +++ G  P+++TYN LI GLCK+ ++
Sbjct: 329 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQV 388

Query: 199 RTARWILKELGDSG-HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
             A  + + + +SG  A NA+TY+T+        +      I S +  KG++ D   Y +
Sbjct: 389 DEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTS 448

Query: 258 VIAAFVKIGR-----------------------------------LKEATDYMEQMVTDG 282
           +I  + K  R                                    + A    + M   G
Sbjct: 449 LILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG 508

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEM---EKQGFECDKYTHTILIDGLCKAGNIK 339
              D + YN ++    +  K + A  +L+++     + F         L++ LC+ G   
Sbjct: 509 CTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTD 568

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A+  L  M++ GF + + +YN ++  L +  + D A  VFE+M       +  T + ++
Sbjct: 569 DAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVI 628

Query: 396 HNLCKAKRLPSASKLL 411
             LC A ++  A +L+
Sbjct: 629 SWLCSAAKVDDAYELV 644



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 188/419 (44%), Gaps = 8/419 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +   CKANR+ +A+ ++   +  G  P+VVTY+ +I+  C+    D  Y +   M 
Sbjct: 270 FTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLME 329

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                P+VVT+N LI G  +   +  +  L   M E G  PD+ +YNSL+  L +  + D
Sbjct: 330 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 389

Query: 130 EANRVFQDMICGDLTPCTA-TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           EA ++FQ +    ++   A T++ + +G        +A R+F  L   GF P+L TY  L
Sbjct: 390 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I   CK  R      +++E+   G  P   T + ++   F     +  +++  +M  +G 
Sbjct: 450 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 509

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD---GVQLDIVSYNTLINLYCKEGKLEA 305
           T D   Y  V+    +  +  +A   +EQ++            + + L+   C+ GK + 
Sbjct: 510 TDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD 569

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LL +M ++GF     ++  L+ GL +      A    E M   G    +   N ++ 
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 629

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            L    K+D A  + + M       D  T ++++   CK+ R   A KLL    ++G+ 
Sbjct: 630 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLE 688



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 190/415 (45%), Gaps = 12/415 (2%)

Query: 23  LEKAEAIII--DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           ++K E +++  D  R  V  +V + N  +D  C+         +          P+  TY
Sbjct: 1   MDKPELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTY 60

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
             LI G +    L  ++ LL+EM   G   +   + +LM  L   G+  EA   F+ M  
Sbjct: 61  GILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-A 119

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
            D  P   T+  +++ LCK    D A  M R +   G  P+ VT++ LI GLCK G    
Sbjct: 120 KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179

Query: 201 ARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
           A  +L+++   G   +   + TI+ + C +    +L  ++L  +  KG+T     +  VI
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 239

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
             F K   L  A   +E M+  G   ++ ++  LI   CK  ++  A  LL++M   G  
Sbjct: 240 NGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCS 299

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            +  T++ +I+GLCK G +  A    + M +     N+  +N ++D L K  +I+ A  +
Sbjct: 300 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 359

Query: 380 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           +  M       D  TY+S++  LCK+ ++  A +L  +  +SGV    SA  AV 
Sbjct: 360 YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV----SAANAVT 410



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 4/350 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA R+E+A  +       G  PD++TYN LID  C+    D  + +   + E
Sbjct: 341 NILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE 400

Query: 71  AGISP-DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +G+S  + VTY++L  G      ++ +  +   +++ G  PD+ +Y SL+    +  +  
Sbjct: 401 SGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAV 460

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   + ++M      P   T + +L GL +  +T+ A+++F  +   G   + + YN+++
Sbjct: 461 EVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVV 520

Query: 190 KGLCKAGRLRTARWILKEL---GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +G+ +A +   A  +L+++    D    P++     +++   +  K     ++L  M  +
Sbjct: 521 EGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSER 580

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+      Y  +++   ++ R  EAT   E MV+ G   +I + N +I+  C   K++ A
Sbjct: 581 GFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA 640

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           Y L+  M K G   D  T   LI G CK+G    AR  LE M + G + N
Sbjct: 641 YELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 3/205 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM---REAGISP 75
           + N  E+A  +       G   D + YN++++   +    D    +L ++   R+   +P
Sbjct: 490 EGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNP 549

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
                ++L+    +      +  LL +M E G    V SYN L+  L +L + DEA +VF
Sbjct: 550 SSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVF 609

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M+     P  +T N++++ LC     D+A  + + + K G  P++ T N LI G CK+
Sbjct: 610 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKS 669

Query: 196 GRLRTARWILKELGDSGHAPNAITY 220
           GR   AR +L+E+ ++G  PN  T+
Sbjct: 670 GRADLARKLLEEMTEAGLEPNDTTH 694



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 71/148 (47%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S+  ++  V + C+  + + A+ ++      G    V +YN L+    +   +D    + 
Sbjct: 550 SSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVF 609

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M  AG +P++ T N +I+     + +  + +L+  M ++G  PD+ + N+L+    + 
Sbjct: 610 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKS 669

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIM 153
           G+ D A ++ ++M    L P   T +++
Sbjct: 670 GRADLARKLLEEMTEAGLEPNDTTHDLL 697


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 214/448 (47%), Gaps = 44/448 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +S    +I +    KA  + +A ++  +    G   D+ TY  +++   +         +
Sbjct: 222 VSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVAL 281

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           + ++   G +P + TYN+L+ G  +   L  ++DLL ++++ G  PDV +Y SL+  L +
Sbjct: 282 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 341

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +  EA ++F++M    L   T  +  ++ GL +      A  +++ +  HG VP++VT
Sbjct: 342 EKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVT 401

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
            + +I GL KAGR+  A  I K +   G APN + Y+ ++    + RK    LE+L+ MK
Sbjct: 402 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 461

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +         +CT                            D ++YN LI+  CK G +E
Sbjct: 462 K--------AFCTP---------------------------DTITYNILIDGLCKSGDVE 486

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           AA    DEM + G + D YT+ ILI GLCKAGN   A   L+ M+   F      Y+ +V
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLV 541

Query: 365 DRLGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           D L K GK++    +F  ME   V +S T + ++ +LCKA R+  A  L  +  K G+  
Sbjct: 542 DGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP- 600

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              A  +++  L  SG   E + +  ++
Sbjct: 601 HPYAYNSIISALIKSGKVNEGQAVYQEM 628



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 211/445 (47%), Gaps = 38/445 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F +  R  +A  ++ + +     PDV T+N+LI  YC     +  + ++  M E
Sbjct: 123 NALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEE 182

Query: 71  A-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++P + T+N ++ G  ++  +  ++D   E +   +P    +++ L++ L + G   
Sbjct: 183 DFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMI 241

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A+ + Q+      T    T+  ++N L KN+    A+ +   +  +G  P + TYN L+
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK GRL  A  +L+++ D+G  P+ +TYT+++    + ++     ++   M  +G  
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I   ++ G++ +A+   + M + G   D+V+ +T+I+   K G++ AA  +
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421

Query: 310 LDEMEKQGF--------------------EC---------------DKYTHTILIDGLCK 334
              ME +G                     +C               D  T+ ILIDGLCK
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
           +G+++ AR   + M + G   ++  YN ++  L K G  D A  V + M     F YSS+
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS-SSRFVYSSL 540

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGV 419
           V  LCK+ +L     L     +SGV
Sbjct: 541 VDGLCKSGKLEGGCMLFHEMERSGV 565



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 170/370 (45%), Gaps = 39/370 (10%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G    V + N+L+    +  +  EA  + ++ +     P   T+N+++ G C  R  + A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 167 LRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRT------------------------- 200
             + R +++  G  P L T+N+++ GLCK+G++                           
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILING 233

Query: 201 ---------ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
                    A  + +E   +G   +  TYT I+    +N+K +  + ++  +   G T  
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  ++    K+GRL+EA D + ++V +G   D+V+Y +LI+   KE +   AY L  
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM  +G   D   +T LI GL + G I  A    + M   G   ++   + ++D L K G
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           +I  A+ +F+SME +    +   YS+++H LCKA+++  A ++L    K+          
Sbjct: 414 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 473

Query: 428 AVVDGLRHSG 437
            ++DGL  SG
Sbjct: 474 ILIDGLCKSG 483



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 8/300 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  ++ +A ++       G +PDVVT + +ID   +     A   I   M   G++P+ V
Sbjct: 376 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 435

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            Y++LI G  +   + C+L++L +M +    PD  +YN L+  L + G  + A   F +M
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P   T+NI+++GLCK   TD A  +   +    FV     Y+ L+ GLCK+G+L
Sbjct: 496 LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGKL 550

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
                +  E+  SG A +      I   C  NR  +  + + +A++++G     + Y ++
Sbjct: 551 EGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDE-AVSLFNAIRKEGMPHP-YAYNSI 608

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+A +K G++ E     ++M T   + D V+YN L+N      +++ A+    EM  +G+
Sbjct: 609 ISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 39/205 (19%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK+  +E A A   + +  G  PDV TYN+LI   C+  + DA   +L+ M  
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-- 530

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP--------------------- 109
              S     Y+SL+ G  ++  L     L  EM   G+                      
Sbjct: 531 ---SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEA 587

Query: 110 ------------PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
                       P  ++YNS++  L + GK +E   V+Q+M      P   T+N +LNG+
Sbjct: 588 VSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGM 646

Query: 158 CKNRYTDNALRMFRGLQKHGFVPEL 182
                 D A   +  +   G+VP +
Sbjct: 647 IGANRMDRAHYYYLEMTGRGYVPPV 671



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 6/193 (3%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFEC 320
           F +  R +EA + ++  +    + D+ ++N LI  YC   + E A+ ++ EME+  G   
Sbjct: 129 FARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAP 188

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
              TH +++ GLCK+G +  A  H E + +     +   ++ +++ L K G +  A ++ 
Sbjct: 189 SLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVKAGMMIQAHSLA 247

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           +         D  TY+++V+ L K K++  A  L+     +G     +   A+++GL   
Sbjct: 248 QETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 307

Query: 437 GCRREAKKIQSKI 449
           G   EA  +  KI
Sbjct: 308 GRLEEAIDLLRKI 320


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 216/456 (47%), Gaps = 18/456 (3%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI + + C+  ++++A  +++        PDVV+Y+ +ID YC          ++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSL-------DLLDEMLEMGIPPDVWSYNSL 118
           + M+  G+ P+  TYNS+I       LL C +        +L EM+   I PD   Y +L
Sbjct: 317 DDMQIKGLKPNRYTYNSII-------LLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +H  F+LG    AN+ F +M+   ++P   T+  ++ G  +         +F  +   G 
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P+ VTY  LI   CKAG +  A  +  E+   G  PN +TY  ++    ++ +     E
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M++KG   +   Y +++    K G +++A   M++M   G+  D ++Y T+I+ YC
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           + G ++ A+ LL EM  +G +    T  +L++G C  G ++     L +M + G   +  
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++ +      ++    +++ M       DS TY+ ++   CKA+ L  A  L    
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++ G     ++  A++          EA+++  ++R
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 197/404 (48%), Gaps = 4/404 (0%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           AN  E  E  I      G+  +  +YN++I + C+       + +L +M     +PDVV+
Sbjct: 236 ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS 295

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y+++I G      L  +L L+D+M   G+ P+ ++YNS++  L ++GK  EA +V ++M+
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P    +  +++G  K  +   A + F  +      P+ +TY  LI+G  + G++ 
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
             + +  E+   G  P+ +TYTT++    +  +      + + M + G T +   Y  +I
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
               K G L  A + +++M   G+QL++  YN+++N  CK G +E A  L+ EME  G +
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T+T +ID  C+ G+I  A   L+ M   G    +  +N +++     G ++    +
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 380 ----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
                E   V D+ TY++++   C    + + +K+       GV
Sbjct: 596 LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 154/297 (51%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            +CKA  +  A ++  + +++G+ P++VTY  LID  C+    D    +L+ MR+ G+  
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V  YNS++ G  +   +  ++ L+ EM   GI PD  +Y +++    +LG  D+A+++ 
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   L P   TFN+++NG C     ++  R+   + + G VP+ +TYN L+K  C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             + T   I K + + G AP++ TY  ++K   + R  K    +   M  KGY      Y
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             +I  F K  ++ EA +  E+M   G+  D   YN  +++  +EG +E    L DE
Sbjct: 682 NALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 179/404 (44%), Gaps = 35/404 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +  +AE ++ + +   ++PD V Y  LI  + +           + M  
Sbjct: 332 NSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ISPD +TY +LI G  +   +    +L  EM+  G+ PD  +Y +L+    + G+   
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M+   +TP   T+  +++GLCK+   D A  +   ++K G    +  YN ++ 
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----NRKYKL----------- 235
           G+CKAG +  A  ++KE+  +G  P+AITYTT++    R    ++ +KL           
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 236 --------------------GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
                               G  +L  M  KG   D   Y T++        +   T   
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   GV  D  +YN LI  +CK   L+ A+ L  EM ++G+     ++  LI    K 
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
             I  AR   E M   G  ++ E YN  VD   ++G ++  +N+
Sbjct: 692 KKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 9/237 (3%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LN+C+        CKA  +E+A  ++ +    G+ PD +TY  +IDAYC+    D  + +
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCL 122
           L  M + G+ P VVT+N L+ G     +L     LL  MLE GI PD  +YN+LM  HC+
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
                 +   ++++ M    + P + T+NI++ G CK R    A  +++ + + G+VP +
Sbjct: 621 --RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            +YN LIK   K  ++  AR + +E+   G   +   Y   +  C+     ++ L +
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 37/382 (9%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+ + ++           LS +  LLD++L  G+   V S N+    L ++    E   +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAF---LSRIANNSEGIEM 244

Query: 135 FQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
              + C   ++  T ++NI++  LC+      A R+   +      P++V+Y+ +I G C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L+ A  ++ ++   G  PN  TY +I+    +  K     ++L  M  +    D  
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  F K+G ++ A  + ++M++  +  D ++Y TLI  + + GK+     L  EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
             +G + D+ T+T LID  CKAG +  A  LH E M ++G   N+               
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE-MVQMGMTPNI--------------- 468

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
                            TY +++  LCK   L +A++LL    K G+++      ++V+G
Sbjct: 469 ----------------VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
           +  +G   +A K+  ++ +A I
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGI 534



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 11/237 (4%)

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           F N K ++G+++     R  YT+  +G     +       V+IG L EA   ++++++ G
Sbjct: 161 FLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYG 220

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           + + + S N  ++        E   + +    + G   +  ++ I+I  LC+ G +K A 
Sbjct: 221 LVVTVDSCNAFLSRIANNS--EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAH 278

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             L  M+      ++ +Y+ ++D     G++  A+ + + M++K    + +TY+S++  L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           CK  +   A K+L   +   +         ++ G    G  R A K   ++   KIS
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 42/95 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA  L++A  +  + I  G +P V +YN LI  + +         +   MR 
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
            G+  D   YN  +        +  +L+L DE +E
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 214/452 (47%), Gaps = 24/452 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C  NR+ +  A++   +R G +PD+VTY  LI   C          +  RM+
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE------MGIPPDVWSYNSLMHCLF 123
           + G +P+ +TY +L+ G  R   +S +L L  EML       +   P V SY+ ++  L 
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + DEA  +F++M    +TP   ++  ++         + A R+F  +   G  P +V
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVV 305

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+N+LI  LCK G++  A+ +L+ +   G  PN +TY ++++            E+  +M
Sbjct: 306 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D   Y  +I  + K  +++EA      M+  G + D+ +Y  L+    + GK+
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L   M+  G   D Y + I ++GLCK G +  A      +       ++E +NC+
Sbjct: 426 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 485

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D L K GK++ A  +FE +  +    D  TY+ M+H  C+  ++  A+ L     K+G 
Sbjct: 486 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 545

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
              K     ++ G        E+KK++  + +
Sbjct: 546 TPDKITYATLIRGF------FESKKLEKVVEL 571



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 18/346 (5%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P + S+  L+  L ++    +   ++  M    ++P   T NI+LN LC        L +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
             G+ + G++P++VTY  LIKGLC   R+  A  +   +   G  PNAITY T+MK   R
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 230 NRKYKLGL----EILSAMKRKGYTFDG--FGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                + L    E+L+     G  F      Y  +I A  K  R  EA D  E+M   G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              ++SY +L+         E A  L +EM  QG + +  T  +LID LCK G +  A+ 
Sbjct: 274 TPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            LE M + G   NL  YN +++     G ++ A  +F SM  K    D   Y+ +++  C
Sbjct: 326 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 385

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K  ++  A KL    L+ G R       A++ GL   G   +AKK+
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 199/426 (46%), Gaps = 18/426 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P + ++  L+    +   +   + + N+MR +GISPD  T N L+      + +   L +
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           +  +L  G  PD+ +Y +L+  L    +  +A  +F  M     TP   T+  ++ GLC+
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 160 NRYTDNALRMFR------GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
                 AL++ +       L    F P +++Y+I+I  LCK  R   AR + +E+   G 
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P  I+YT++M        ++    + + M  +G   +   +  +I    K G++ EA D
Sbjct: 274 TPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +E M+  G+  ++++YN+LI  +C  G L +A  L   M  +G E D   +T+LI+G C
Sbjct: 326 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 385

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 389
           K   ++ A      M ++G   +++ Y  ++  L + GK+  A  +F  M+V     D +
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 445

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            Y   ++ LCK   L  A +L        +++       ++DGL  +G    A ++  K+
Sbjct: 446 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 505

Query: 450 RMAKIS 455
              ++ 
Sbjct: 506 PQEELQ 511



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 147/282 (52%), Gaps = 8/282 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   CK  ++ +A+ ++   I+ G++P+++TYN LI+ +C     ++   +   M 
Sbjct: 307 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 366

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV+ Y  LI G  + S +  ++ L + ML++G  PDV +Y +L+  LFQ GK  
Sbjct: 367 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 426

Query: 130 EANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           +A ++F  M    I GDL      + I LNGLCKN     A+ +F  L+ +    ++  +
Sbjct: 427 DAKKLFGVMKVYGIPGDL----YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 482

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N LI GLCKAG+L TA  + ++L      P+ +TY  ++    R  +      +   M++
Sbjct: 483 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 542

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            G T D   Y T+I  F +  +L++  + +  MV   V LD+
Sbjct: 543 NGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 189/404 (46%), Gaps = 18/404 (4%)

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            +   + M  +  +P + ++  L++G  +    S    L ++M   GI PD  + N L++
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           CL  + +  E   V   ++     P   T+  ++ GLC       A  +F  +QK G  P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKE-LGDSG-----HAPNAITYTTIMKCCFRNRKYK 234
             +TY  L+KGLC+ G +  A  + +E L DS        P  I+Y+ I+    ++R+  
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++   MK +G T     Y +++         +EA     +MV  GVQ ++V++N LI
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLI 311

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           ++ CKEGK+  A  LL+ M ++G   +  T+  LI+G C  G++  AR     M   G +
Sbjct: 312 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            ++  Y  +++   K  K++ A+ ++  M    +  D  TY +++  L +  ++  A KL
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                  G+          ++GL  +GC  EA ++ +K++   I
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL     N  +   CKA +LE A  +     +  + PDVVTYN++I  +C+         
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           +  +M + G +PD +TY +LI G   +  L   ++LL  M++  +  DV
Sbjct: 536 LFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 191/413 (46%), Gaps = 40/413 (9%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVV Y  +ID+ C+       + + ++M   GISPD+ TY SLI              L
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L++M+   I PDV  +++++  L + GK  EA+ V   MI   + P   T+N +++G C 
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A+++F  +  +G+ P +++YN LI G CK  R+  A ++ +E+      PN +T
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T+M  C                                     +GRL++A     +MV
Sbjct: 387 YNTLMHXC------------------------------------HVGRLQDAIALFHEMV 410

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D+ +Y  L++  CK+  L+ A  LL  +E    + D   +TI+IDG+C+AG ++
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            AR     ++  G   N+  Y  +++ L + G +D A  +F  M+      D  TY+++ 
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 530

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             L + K    A +LL   L  G     S    +V+ L      +  K+I S+
Sbjct: 531 QGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 180/380 (47%), Gaps = 5/380 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +++N        F + D   +  NRM      P  V +N L+    +         L ++
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M   GIPPDV++ N L++    L +   A  V   ++     P TATF  ++ GLC    
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
             +AL +F  +   GF P +VTY  LI GLCK G    A  +L+ +      P+ + YT+
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           I+    ++R+      + S M  +G + D F Y ++I +   +   K  T  + QM+   
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  D+V ++T+++  CKEGK+  A+ ++D M  +G E +  T+  L+DG C    +  A 
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 398
              + M   G+  N+ +YN +++   K  ++D A  +FE M     + ++ TY++++H  
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-X 393

Query: 399 CKAKRLPSASKLLLSCLKSG 418
           C   RL  A  L    +  G
Sbjct: 394 CHVGRLQDAIALFHEMVAHG 413



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 200/407 (49%), Gaps = 5/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + +FC  NRL  A +++   ++LG  PD  T+  LI   C          + ++M 
Sbjct: 107 LNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+VVTY +LI G  +    + ++ LL  M +    PDV  Y S++  L +  +  
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 226

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M+   ++P   T+  +++ LC      +   +   +     +P++V ++ ++
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G++  A  ++  +   G  PN +TY  +M       +    +++   M   GY 
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  + KI R+ +AT   E+M    +  + V+YNTL++  C  G+L+ A  L
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIAL 405

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM   G   D  T+ IL+D LCK  ++  A   L+ +     D +++ Y  ++D + +
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 465

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
            G+++ A ++F ++  K    +  TY+ M++ LC+   L  A+KL +
Sbjct: 466 AGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 512



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 208/433 (48%), Gaps = 5/433 (1%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L+ A +     + +   P  V +N L+ +  +   +   +++ N+M   GI PDV T 
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI      + L  +  +L ++L++G  PD  ++ +L+  L   GK  +A  +F  MI 
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P   T+  ++NGLCK   T+ A+R+ R +++    P++V Y  +I  LCK  ++  
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +  ++   G +P+  TYT+++       ++K    +L+ M       D   + TV+ 
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           A  K G++ EA D ++ M+  GV+ ++V+YN L++ +C + +++ A  + D M   G+  
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 347

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  ++  LI+G CK   +  A    E M +     N   YN ++      G++  AI +F
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALF 406

Query: 381 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
             M    ++ D  TY  ++  LCK   L  A  LL +   S +         V+DG+  +
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 437 GCRREAKKIQSKI 449
           G    A+ I S +
Sbjct: 467 GELEAARDIFSNL 479



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 198/414 (47%), Gaps = 5/414 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+ PDV T N+LI+++C        +++L ++ + G  PD  T+ +LI G      +  
Sbjct: 98  FGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGD 157

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  P+V +Y +L++ L ++G  + A R+ + M  G+  P    +  +++
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P++ TY  LI  LC     +    +L ++ +S   P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + ++T++    +  K     +++  M  +G   +   Y  ++        + EA    
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV +G   +++SYNTLIN YCK  +++ A  L +EM ++    +  T+  L+   C  
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHV 396

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++ A      M   G   +L  Y  ++D L K   +D A+ + +++E      D   Y
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + ++  +C+A  L +A  +  +    G+R        +++GL   G   EA K+
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  ++ +A  +    +  G+ PD+ TY  LI + C    +    T+LN+M  + I P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           DVV +++++    +   ++ + D++D M+  G+ P+V +YN+LM  HCL    + DEA +
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL--QSEMDEAVK 335

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+     P   ++N ++NG CK +  D A  +F  + +   +P  VTYN L+   C
Sbjct: 336 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XC 394

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  +  E+   G  P+  TY  ++    +       + +L  ++      D  
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI    + G L+ A D    + + G++ ++ +Y  +IN  C+ G L+ A  L  EM
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 514

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           +  G   D  T+  +  GL +      A   L+ M   GF +++     +V+ L  D K+
Sbjct: 515 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD-KL 573

Query: 374 DHAI 377
           D ++
Sbjct: 574 DQSV 577



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 1/304 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +  V   CK  ++ +A  ++   I  GV P+VVTYN L+D +C     D    + + M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G +P+V++YN+LI G  +   +  +  L +EM +  + P+  +YN+LMH    +G+ 
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRL 399

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +F +M+     P  AT+ I+L+ LCK  + D A+ + + ++     P++  Y I+
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G+C+AG L  AR I   L   G  PN  TYT ++    R        ++   M   G 
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + DG  Y T+    ++      A   +++M+  G   D+ +   L+ + C +   ++   
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 579

Query: 309 LLDE 312
           +L E
Sbjct: 580 ILSE 583



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++  I +   C+A  LE A  I  +    G+ P+V TY ++I+  C+    D    +   
Sbjct: 454 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 513

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           M   G SPD  TYN++  G  +N     ++ LL EML  G   DV +   L+  L
Sbjct: 514 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 195/405 (48%), Gaps = 8/405 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y +LI   C+         +L+ M   G+ P V TYN++I G  ++  +  +L +   M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G  PD W+YNSL++ L   GK DEA  +    I    TP   TF  ++NG CK    D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           +ALR+   +       +L  Y +LI  L K  RL+ A+  L E+  +G APN + YT+I+
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSII 465

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +       LE+   M+ +G   + + Y ++I   ++  +L +A   + +M  DG+ 
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
             +++Y TLI   CK+ + + A+ L + MEK G   D+  + +L D LCK+G  + A   
Sbjct: 526 PGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA--- 582

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
             ++ + G       Y  +VD   K G  D A  + E M  +    D +TYS ++  LCK
Sbjct: 583 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            K+L  A  +L     SGV+    A   ++  +   G    AK +
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 207/472 (43%), Gaps = 43/472 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  +  + +   CK  R+  A  ++ +    GV+P V TYN +ID YC+         I
Sbjct: 282 LNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI 341

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-------------- 110
              M + G +PD  TYNSLI G     L     +LL+  +  G  P              
Sbjct: 342 KALMEQNGCNPDDWTYNSLIYGLCGGKLDEAE-ELLNGAIARGFTPTVITFTNLINGYCK 400

Query: 111 ---------------------DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                                D+ +Y  L++ L +  +  EA     +M    L P    
Sbjct: 401 AERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVI 460

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +  +++G CK      AL +F+ ++  G  P   TY  LI GL +  +L  A  ++ ++ 
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G  P  I YTT+++   +  ++     +   M++ G T D   Y  +  A  K GR +
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAE 580

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA  +   +V  GV L  V+Y +L++ + K G  + A +L+++M  +G + D YT+++L+
Sbjct: 581 EAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLL 637

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EV 385
             LCK   +  A   L+ M   G   N+ AY  I+  + K+GK DHA ++F  M      
Sbjct: 638 QALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHK 697

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             + TY+  + + CK  ++  A  L+    + GV          ++G  H G
Sbjct: 698 PSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMG 749



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 174/367 (47%), Gaps = 3/367 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA R++ A  +  + I      D+  Y +LI+   +          LN M   G++P+
Sbjct: 398 YCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y S+I G  +  ++  +L++   M   G  P+ W+Y SL++ L Q  K  +A  +  
Sbjct: 458 VVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALIT 517

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    +TP    +  ++ G CK    DNA R+F  ++K+G  P+   YN+L   LCK+G
Sbjct: 518 KMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG 577

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A   L      G     +TYT+++    +         ++  M  +G   D + Y 
Sbjct: 578 RAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++ A  K  +L EA   ++QM   GV+ +IV+Y  +I+   KEGK + A  L +EM   
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +    T+T+ I   CK G I+ A   +  M + G   ++  Y+  ++  G  G +D A
Sbjct: 695 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRA 754

Query: 377 INVFESM 383
            +  + M
Sbjct: 755 FSTLKRM 761



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 197/428 (46%), Gaps = 23/428 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL  +   + +    K  RL++A+  + +    G+ P+VV Y  +ID YC+     A   
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALE 479

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   G  P+  TY SLI G  ++  L  ++ L+ +M E GI P V +Y +L+    
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQC 539

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D A R+F+ M    LTP    +N++ + LCK+   + A   +  L + G V   V
Sbjct: 540 KKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKV 596

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ G  KAG    A  +++++ + G   +  TY+ +++   + +K    L IL  M
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +   Y  +I+  +K G+   A     +M++ G +    +Y   I+ YCK G++
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQI 716

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L+ EME+ G   D  T+ I I+G    G +  A   L+ M     + N   Y  +
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLL 776

Query: 364 VDRLGKDGKID-HAIN---VFESMEVKDSF----------------TYSSMVHNLCKAKR 403
           +    K   I+ H I+   ++  +E+   +                TYSS++   CKA R
Sbjct: 777 LKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATR 836

Query: 404 LPSASKLL 411
           L  A  LL
Sbjct: 837 LEEACVLL 844



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 43/472 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS +  N+ + +  + +  E    +    ++ G+LPD VTYN +I AYC+  S    +  
Sbjct: 142 LSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              +RE+G+  D  T N+L+ G  R S L  +  LL  M  MG   + +SY  L+  L++
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYE 261

Query: 125 L-----------------------------------GKPDEANRVFQDMICGDLTPCTAT 149
                                               G+  +A  +  +M    + P   T
Sbjct: 262 ARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWT 321

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N M++G CK+    +AL +   ++++G  P+  TYN LI GLC  G+L  A  +L    
Sbjct: 322 YNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAI 380

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G  P  IT+T ++    +  +    L + S M       D   Y  +I   +K  RLK
Sbjct: 381 ARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLK 440

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + + +M  +G+  ++V Y ++I+ YCK G + AA  +   ME +G   + +T+  LI
Sbjct: 441 EAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
            GL +   +  A   +  M + G    + AY  ++    K  + D+A  +FE ME     
Sbjct: 501 YGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLT 560

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            D   Y+ +   LCK+ R   A   L   ++ GV + K    ++VDG   +G
Sbjct: 561 PDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAG 609



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 196/430 (45%), Gaps = 26/430 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+     CK+ R E+A + ++   R GV+   VTY  L+D + +  + D    ++ +M  
Sbjct: 567 NVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 623

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D+ TY+ L+    +   L+ +L +LD+M   G+  ++ +Y  ++  + + GK D 
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +MI     P   T+ + ++  CK    + A  +   +++ G  P++VTY+I I 
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G +  A   LK + D+   PN  TY  ++       K+ L + +++A     +  
Sbjct: 744 GCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL-------KHFLKMSLINA-----HYI 791

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D  G    I        L      +E+M+  G+   +V+Y+++I  +CK  +LE A +LL
Sbjct: 792 DTSGMWNWI-------ELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M  +    ++  +T+LI   C           +  M + GF   LE+Y+ ++  L  +
Sbjct: 845 DHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904

Query: 371 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G  D A ++F  +   D       +  +   L KA  +   S+LL +      RI   + 
Sbjct: 905 GDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESY 964

Query: 427 KAVVDGLRHS 436
             + D +R +
Sbjct: 965 SMLTDSIREA 974


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 39/433 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    ++ +   A  +  + +  GV P+ +TYN +ID + +    +AG+ + ++M +
Sbjct: 199 NVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQ 258

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL------------ 118
            G  P+VVTYN L++G  R   +  +  L+DEM    + PD ++Y+ L            
Sbjct: 259 DGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRT 318

Query: 119 MHCLF-----------------------QLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           M  LF                       + GK  +A +V + ++   L P TA +N ++N
Sbjct: 319 MLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLIN 378

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C+ R    A  +F  ++     P+ +TYN LI GLCK   +  A  ++ E+  SG  P
Sbjct: 379 GYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDP 438

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  T+ T++    R  + +    +LS M+ KG   +   + +V+ AF K G++ EA   +
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAIL 498

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M+   V  +   YN++I+ Y + G  E A+LL+++M+  G     +T+ +L+ GLCK 
Sbjct: 499 DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF-TY 391
             I  A   +  +   G   ++ +YN I+      G  D A+ + + M   +++ +  TY
Sbjct: 559 SQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTY 618

Query: 392 SSMVHNLCKAKRL 404
             ++  L  A R+
Sbjct: 619 HPLLSALGSAGRV 631



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 198/423 (46%), Gaps = 6/423 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP + + N+L+++                +  AG  PD   +N  +        L  +L 
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 99  LLDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +L  M   E   PPD +SYN ++  L++ GK  +A +VF +M+   + P   T+N M++G
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    +   R+   + + G  P +VTYN+L+ GLC+AGR+   R ++ E+      P+
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY+ +     R    +  L +     +KG     +    ++    K G++ +A   +E
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +V  G+      YNTLIN YC+   L+ A+ + ++M+ +    D  T+  LI+GLCK  
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKME 419

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   +  M K G D ++E +N ++D  G+ G+++    V   M+ K    +  ++ 
Sbjct: 420 MITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFG 479

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           S+V   CK  ++P A  +L   +   V        +++D    SG   +A  +  K++ +
Sbjct: 480 SVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSS 539

Query: 453 KIS 455
            +S
Sbjct: 540 GVS 542



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 185/390 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+A R+++  A++ +     +LPD  TY++L D   +        ++     +
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLK 328

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     T + L+ G  ++  ++ +  +L+ ++  G+ P    YN+L++   Q+     
Sbjct: 329 KGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQG 388

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+ M    + P   T+N ++NGLCK      A  +   ++K G  P + T+N LI 
Sbjct: 389 AFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLID 448

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              +AG+L     +L ++ D G   N I++ +++K   +N K    + IL  M  K    
Sbjct: 449 AYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVP 508

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I A+++ G  ++A   +E+M + GV   I +YN L+   CK  +++ A  L+
Sbjct: 509 NAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI 568

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             +  QG   D  ++  +I   C  G+   A   L+ M+K      L  Y+ ++  LG  
Sbjct: 569 YNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSA 628

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHNLCK 400
           G++     +++ M  K+    SS+    C+
Sbjct: 629 GRVHDMECLYQHMVHKNVEPSSSIYGTRCE 658



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 152/351 (43%), Gaps = 39/351 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  ++ KAE ++   +  G++P    YN LI+ YCQ       ++I  +M+ 
Sbjct: 339 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS 398

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM----------H 120
             I PD +TYN+LI G  +  +++ + DL+ EM + G+ P V ++N+L+           
Sbjct: 399 RHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEK 458

Query: 121 CLFQL-------------------------GKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           C   L                         GK  EA  +  DMI  D+ P    +N +++
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              ++  T+ A  +   ++  G    + TYN+L+KGLCK  ++  A  ++  L + G  P
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRP 578

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y TI+  C         LE+L  M +         Y  +++A    GR+ +     
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY----LLLDEMEKQGFECDK 322
           + MV   V+     Y T      K   L+       +  D+ E+   E D+
Sbjct: 639 QHMVHKNVEPSSSIYGTRCENESKVASLKKEMSEKGIAFDDTERTNLELDR 689


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 203/414 (49%), Gaps = 3/414 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           N  +  +C  +RLE A  +I +    G  PD ++Y  ++   C+         ++ +M +
Sbjct: 243 NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 302

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++ + PD VTYN+ +   +++     +L+ L E  E     D   Y++++H   + G+ D
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 362

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M      P   T+  ++NGLC+ R  D A +M R + KHG  P  V+Y  L+
Sbjct: 363 KAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 422

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G    AR ++    +    PNAITY+ +M    R  K     +++  M +KG+ 
Sbjct: 423 NGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFF 482

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                   +I +  +  ++ EA  +MEQ + +G  +++V++ T+I+ +C++  LEAA  L
Sbjct: 483 PTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 542

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LD+M       D  T+T +ID L K G I+ A      M ++G       Y  ++ +  +
Sbjct: 543 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 602

Query: 370 DGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            G+++  + + E M  +      Y+ ++  LC    L  A KLL   L++  +I
Sbjct: 603 MGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 656



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 204/444 (45%), Gaps = 7/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +      NRL+KA   +     + + P+V+TYN LI  YC     +    ++  M  
Sbjct: 208 NTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPF 267

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPD 129
            G SPD ++Y +++    +   +     L+++ML +  + PD  +YN+ +H L + G  D
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA    ++            ++ +++  C+    D A  +   +   G +P++VTY  +I
Sbjct: 328 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 387

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+  ++  A+ +L+++   G  PN ++YT ++    +N       E+++  +   + 
Sbjct: 388 NGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWI 447

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++  F + G+  EA D + +M+  G     V  N LI   C+E K++ A   
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 507

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +++    G   +    T +I G C+  +++ A   L+ M       ++  Y  I+D LGK
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 567

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I+ A  +   M     +    TY +++H  C+  R+    KLL   L    +  ++A
Sbjct: 568 KGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTA 625

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              V++ L   G   +A K+  K+
Sbjct: 626 YNQVIEKLCSFGNLEQAYKLLGKV 649



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 184/383 (48%), Gaps = 5/383 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D + Y  +++   +         +L  M +  I      +  ++   +R   L  ++ +L
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVL 192

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M + GI PD+   N+ +H L    + D+A R  + M   ++ P   T+N ++ G C  
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDL 252

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAIT 219
              ++A+ +   +   G  P+ ++Y  ++  LCK  R++  R ++ K L DS   P+ +T
Sbjct: 253 HRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT 312

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T +    ++      LE L   + + +  D  GY  ++ +F + GR+ +A + + +M 
Sbjct: 313 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 372

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   D+V+Y ++IN  C+E K++ A  +L +M K G + +  ++T L++GLCK GN  
Sbjct: 373 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 432

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MV 395
            AR  +    +  +  N   Y+ ++    ++GK   A ++   M  K  F        ++
Sbjct: 433 EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 492

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
            +LC+ +++  A + +  CL +G
Sbjct: 493 QSLCQEEKVDEAKRFMEQCLNNG 515



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 103/272 (37%), Gaps = 13/272 (4%)

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           ++LN           +R F G +     P       L++ +C+   LR+A W  K  G+ 
Sbjct: 41  MVLNSFTGGYRQTEGIRRFEGGEDESRHP-------LVREICRLIELRSA-WNPKLEGEL 92

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKE 270
            H   ++    +          ++ L       R+  Y  D   Y  ++    K    + 
Sbjct: 93  RHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQG 152

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  M    ++    ++  ++  Y + GKL  A  +L  M+K G E D       I 
Sbjct: 153 AKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIH 212

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
            L     +  A   LE M  +  + N+  YNC++       +++ A+ +   M  K    
Sbjct: 213 VLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSP 272

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D  +Y +++  LCK KR+     L+   LK  
Sbjct: 273 DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDS 304


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 198/409 (48%), Gaps = 34/409 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V  +C+   +++A   I      G+ P+ + +N +ID +C+    D     + +M
Sbjct: 279 IYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKM 338

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              GI+P V TYN LI G  R  + S    +L+EM E G  P+V SY SL++CL + GK 
Sbjct: 339 VGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKI 398

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  V +DM+   + P    +N++++G C       ALR F  + K+G    +VTYN L
Sbjct: 399 LEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSL 458

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           IKGLCK G+L+ A  +   +  +GH P+ ITY +++         +  LE+   MK+ G 
Sbjct: 459 IKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGL 518

Query: 249 -----TF-----------------------------DGFGYCTVIAAFVKIGRLKEATDY 274
                TF                             D   Y  +I  + + G +++A   
Sbjct: 519 KPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSL 578

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++MV  GV+ D  +YN+LI  + KEGKL     L+D+M+ +G   +  T+++LI G C 
Sbjct: 579 QKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCD 638

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             +  GA +    M + GF  N+   N +   L KDG++  A ++   M
Sbjct: 639 LKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEM 687



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 214/447 (47%), Gaps = 16/447 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  R+  AE +  +     ++P+ VT+N LID YC+    D    +  RM++
Sbjct: 105 NVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKK 164

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P ++T+NSL++G  +   +  +  +L+E+   G  PD ++Y+ +   L    K D+
Sbjct: 165 EKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLL---KSDD 221

Query: 131 ----ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               A  ++++ I   +     T +I+LNGLCK    + A  + + L +HG VP  V YN
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++ G C+ G +  A   ++++   G  PN I + +++      +      E +  M  K
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK 341

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y  +I  + ++         +E+M  +G + +++SY +LIN  CK+GK+  A
Sbjct: 342 GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEA 401

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            ++L +M  +G   +   + +LIDG C  G ++ A    + M+K G  + +  YN ++  
Sbjct: 402 EMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKG 461

Query: 367 LGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K GK+  A  +F     +    D  TY+S++     A       +L  +  K G++  
Sbjct: 462 LCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +    ++     SGC +E  K++  +
Sbjct: 522 INTFHPLI-----SGCSKEGIKLKETL 543



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 205/433 (47%), Gaps = 6/433 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           + C  +++    + + D +R  G LP      M++++  +   FD    +   M   G  
Sbjct: 4   SVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFR 63

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PD + Y   +  A +   L  +++L + M    + P+V+ YN L+  L +  +  +A ++
Sbjct: 64  PDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKL 123

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F +M   +L P   TFN +++G CK    D A+ +   ++K    P ++T+N L+ GLCK
Sbjct: 124 FGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCK 183

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK-YKLGLEILSAMKRKGYTFDGF 253
           A R+  AR +L E+  +G  P+  TY+ I     ++       L++      KG   D +
Sbjct: 184 ARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNY 243

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
               ++    K G++++A + ++ +V  G+    V YNT++N YC+ G ++ A L +++M
Sbjct: 244 TCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQM 303

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E +G   +      +ID  C+   I  A   ++ M   G   ++E YN ++D  G+    
Sbjct: 304 ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVF 363

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
                + E ME      +  +Y S+++ LCK  ++  A  +L   +  GV    +    +
Sbjct: 364 SRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNML 423

Query: 430 VDGLRHSGCRREA 442
           +DG    G  REA
Sbjct: 424 IDGSCTVGKLREA 436



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 1/303 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ +AE ++ D +  GVLP+   YNMLID  C            + M + GI   
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYNSLI G  +   L  + ++   +   G  PDV +YNSL+      G   +   +++
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYE 511

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   TF+ +++G C          +F  + +    P+ V YN +I    + G
Sbjct: 512 TMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETG 570

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            ++ A  + KE+ D G  P+  TY +++    +  K     +++  MK KG   +   Y 
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS 630

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I     +     A  +  +M+ +G   ++   N L     K+G+L+ A  +  EM   
Sbjct: 631 LLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIAN 690

Query: 317 GFE 319
           G +
Sbjct: 691 GMD 693



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 138/286 (48%), Gaps = 6/286 (2%)

Query: 153 MLNGLC-KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           ML  +C +++       ++  +++ G +P      ++++ L ++ +      + KE+   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+ + Y   M    +    KL +E+   MKR+    + F Y  +I    K  R+++A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                +M    +  + V++NTLI+ YCK G+++ A  L + M+K+  E    T   L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK-DGKIDHAINVFESMEVK---- 386
           LCKA  I+ AR  L  +   GF  +   Y+ I D L K D     A++++     K    
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           D++T S +++ LCK  ++  A ++L S ++ G+   +     +V+G
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 34/236 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAY------------------ 52
           N  +   CK  +L++AE +       G  PDV+TYN LI  Y                  
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 53  ----------------CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
                           C         T+ N M +  +SPD V YN++I        +  +
Sbjct: 516 LGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKA 575

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L  EM++MG+ PD  +YNSL+    + GK  E   +  DM    L P   T+++++ G
Sbjct: 576 FSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQG 635

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
            C  +  + A   +R + ++GF+P +   N L  GL K GRL+ A+ I  E+  +G
Sbjct: 636 HCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 51/449 (11%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +++Y+++ID  C+    D    +   M+  GI PDV++Y +LI G   +     +  L
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EML++GI PDV + + L+  L + GK  EAN++ + +I         T   ++ GLC 
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 160 NRYTDNALRMFRGLQKHGFVPELVT----------------------------------- 184
                 A ++F  +QK G +P +VT                                   
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 185 ------YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
                 Y+I+I GLCK GR   AR + KE+   G  P+ I+YT+++    R+ K+K    
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + + M   G   D   +  +I    K G++ EA + +E M+  G   + V+Y TL+   C
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIG----- 352
              ++  A  L  +M+K G   D  T+  L+ GLC+ GNIK A  LH + ++  G     
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
           F  ++ +Y+ I+D L K G+ D A  +F+ M+    + +  +Y+S++H  C++ +L  A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            L    +  GV++       ++ G    G
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEG 904



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 22/456 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF----VSFDAGYTILNRMREAG 72
            C  +R+ +A  + +   +LG  PD +TY  L+   CQ     ++      +LN     G
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451

Query: 73  IS--PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           I   P +++Y+ +I G  ++     + +L +EM   GI PDV SY +L+H     GK ++
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   + P   T +++++ LCK      A ++   + + G + ++VT   L+K
Sbjct: 512 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVK 571

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   R+  A  +  ++   G  PN +T  T+MK   ++   K+ LE+   M      +
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 251 ------DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                 +   Y  +I    K GR  EA +  ++M   GV  D++SY +LI+ +C+ GK +
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L +EM   G + D  T ++LID LCK G +  A   LE M + G   N   Y  +V
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA----SKLLLSCLK 416
             L  + +I  A  +F  M+    + D  TY +++  LC+   + +A     K+L    +
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 417 SGVRILKS--AQKAVVDGLRHSGCRREAKKIQSKIR 450
            G        +   ++DGL   G   EA+++  +++
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMK 847



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 205/407 (50%), Gaps = 16/407 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC + + EKA+ +  + + +G+ PDV T ++LID  C+         +L  + + G   D
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT  +L+ G      +S +  L  +M ++G  P+V +  +LM  L Q G    A  + +
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622

Query: 137 DMICG------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +M+        +  P   +++I+++GLCK    D A  +F+ ++  G +P++++Y  LI 
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C++G+ + A+++  E+ D G  P+  T++ ++    +  K     E+L  M ++G   
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T++       R+ EAT    +M   G   D+V+Y TL+   C+ G ++ A  L 
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 802

Query: 311 DEMEKQ------GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +M          F+ D  +++I+IDGLCK G    AR   + M  +G   N+ +Y  ++
Sbjct: 803 KKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLI 862

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
               + GK++ A ++F  M  +    ++ TYS M+H  CK  ++  A
Sbjct: 863 HGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 204/427 (47%), Gaps = 26/427 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYN---------MLIDAYCQFVSFDA 60
            NI +   C   R+ +  A +   +R G +PD+VTY+         MLID  C+      
Sbjct: 13  FNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIE 72

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L  M + G   D+VTY++LI G      +S +  L   M ++G  PD  +Y +LM 
Sbjct: 73  ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 132

Query: 121 CLFQLGKPDEANRVFQDMICG------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
            L Q G  + A ++ Q+M+           P   +++I+++GLCK+R  D A  +F+ ++
Sbjct: 133 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 192

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             G +P++++Y  LI G C +G+   A+ +  E+ D G  P+  T   ++    +  K  
Sbjct: 193 AQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVI 252

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              E+L  M  +G   D   Y T+I       R+ EAT     M   G + D ++Y TL+
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312

Query: 295 NLYCKEGKLEAAYLLLDEM----EKQGFEC---DKYTHTILIDGLCKAGNIKGARLHLEY 347
              C+ GK+  A  L  EM     + G +C   D  T ++LID LCK G +  A   LE 
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV 372

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 403
           M + G   ++  Y+ ++  L  + +I  A  +F SM+      D+ TY +++  LC+   
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432

Query: 404 LPSASKL 410
           +  A +L
Sbjct: 433 INIALQL 439



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 179/350 (51%), Gaps = 17/350 (4%)

Query: 9   LLNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF----VSFD 59
           +L++  CT      C  +R+ KA  + +   +LG +P+VVT   L+   CQ     ++ +
Sbjct: 560 ILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 619

Query: 60  AGYTILNRMREAGIS--PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
               +L+     GI+  P+ ++Y+ +I G  +      + +L  EM  +G+ PDV SY S
Sbjct: 620 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 679

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L+H   + GK  +A  +F +M+   + P   TF+++++ LCK      A  +   + + G
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            +P  VTY  L+KGLC   R+  A  +  ++   G  P+ +TY T+MK   +    K  L
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799

Query: 238 EI----LSAMKRKGYTF--DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
           E+    LS   + G  F  D   Y  +I    K GR  EA +  ++M   GV  +++SY 
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           +LI+ +C+ GKLE A  L +EM  QG + +  T++++I G CK G I  A
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 160/281 (56%), Gaps = 8/281 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ ++Y+++ID  C+    D    +   M+  G+ PDV++Y SLI G  R+     +  L
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EM+++G+ PDV +++ L+  L + GK  EAN + + MI     P T T+  ++ GLC 
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH----- 213
           N     A ++F  +QK G +P++VTY  L+KGLC+ G ++TA  + K+ L D+G      
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ I+Y+ I+    ++ +     E+   MK  G   +   Y ++I  F + G+L++A  
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 876

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
              +MV  GVQL+ V+Y+ +I+ +CKEG+++ A  L  +ME
Sbjct: 877 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 203/428 (47%), Gaps = 28/428 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD  T+N+LI+  C     + G   +  +   G  PD+VTY S+    T +S+L   
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTY-SIRPDVTTSSMLIDI 63

Query: 97  L----------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
           L          +LL+ M++ G   D+ +Y++L+  L    +  EA  +F  M      P 
Sbjct: 64  LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD 123

Query: 147 TATFNIMLNGLCKNRYTDNALR----MFRGLQKHGF--VPELVTYNILIKGLCKAGRLRT 200
             T+  ++ GLC+    + AL+    M     ++G    P L++Y+I+I GLCK  R   
Sbjct: 124 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 183

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           AR + KE+   G  P+ I+YT+++     + K++    + + M   G   D      +I 
Sbjct: 184 ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID 243

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            F K G++ EA + +E MV  G  LDIV+Y+TLI   C + ++  A  L   M+K G   
Sbjct: 244 MFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRP 303

Query: 321 DKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIG------FDSNLEAYNCIVDRLGKDGKI 373
           D   +  L+ GLC+ G I  A  LH E +N            ++   + ++D L K+GK+
Sbjct: 304 DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKV 363

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A  + E M     + D  TYS+++  LC   R+  A+ L +S  K G R        +
Sbjct: 364 IEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTL 423

Query: 430 VDGLRHSG 437
           + GL  +G
Sbjct: 424 MKGLCQTG 431



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 191/380 (50%), Gaps = 14/380 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ +A  ++   I+ G + DVVT   L+   C          +  +M++ G  P+
Sbjct: 538 LCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPN 597

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP------PDVWSYNSLMHCLFQLGKPDE 130
           VVT  +L+ G  ++  +  +L+L   ML    P      P+  SY+ ++  L + G+ DE
Sbjct: 598 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 657

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M    + P   ++  +++G C++    +A  +F  +   G  P++ T+++LI 
Sbjct: 658 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK G++  A  +L+ +   G  PN +TYTT++K    N +     ++   M++ G   
Sbjct: 718 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 777

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL------DIVSYNTLINLYCKEGKLE 304
           D   Y T++    + G +K A +  ++M++D  Q       D++SY+ +I+  CK G+ +
Sbjct: 778 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 837

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L  EM+  G   +  ++T LI G C++G ++ A+     M   G   N   Y+ ++
Sbjct: 838 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897

Query: 365 DRLGKDGKIDHAINVFESME 384
               K+G+ID A+  F+ ME
Sbjct: 898 HGFCKEGQIDKAL--FQKME 915



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 183/384 (47%), Gaps = 40/384 (10%)

Query: 68  MREAGISPDVVTYNSLI----------------AGATRNSLLSCSLDLLDEMLEMGIPPD 111
           MR AG+ PD  T+N LI                AG  R   +        +++   I PD
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIP-------DIVTYSIRPD 53

Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           V + + L+  L + GK  EAN + + MI         T++ ++ GLC       A  +F 
Sbjct: 54  VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 113

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGH-----APNAITYTTIMK 225
            +QK G  P+ +TY  L+KGLC+ G +  A  + +E L D+G       P  I+Y+ I+ 
Sbjct: 114 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 173

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              ++R+     E+   MK +G   D   Y ++I  F   G+ ++A     +M+  G+Q 
Sbjct: 174 GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQP 233

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D+ +   LI+++CKEGK+  A  LL+ M  +G   D  T++ LI GLC    I  A    
Sbjct: 234 DVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLF 293

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----------VKDSFTYSSMV 395
             M K+G   +  AY  ++  L + GKI+ A+++ + M           ++   T SSM+
Sbjct: 294 MSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSML 353

Query: 396 HN-LCKAKRLPSASKLLLSCLKSG 418
            + LCK  ++  A++LL   ++ G
Sbjct: 354 IDILCKEGKVIEANELLEVMIQRG 377


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 212/433 (48%), Gaps = 7/433 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N  +  + KA   E+A  +  + +  G+  +V TYN L+   C+        +I  +M 
Sbjct: 402 VNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMV 460

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P VV+YN++I G  +   +  +  +  EMLE G+ P++ +Y+ LM   F+ G  +
Sbjct: 461 RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  ++  M   ++ P   T NI++NGLCK   T  +    + L + GF+P  +TYN +I
Sbjct: 521 YAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K G + +A  +  E+   G +PN  TYT ++    ++    L L+++  MK KG  
Sbjct: 581 DGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIE 640

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   YC +I  F + G +  A+  + ++   G+  + V Y+++I+ + K   +EAA  L
Sbjct: 641 LDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHL 700

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
              M  +G  CD   +T LI GL K G +   + L+ E + K G   +L  Y+ ++  L 
Sbjct: 701 HKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAK-GIMPDLITYSVLIHGLC 759

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             G++++A  + E M+ K      F Y++++    K   L  A +L    L  G+    +
Sbjct: 760 NKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDT 819

Query: 425 AQKAVVDGLRHSG 437
               +V+G    G
Sbjct: 820 TYDILVNGKVKDG 832



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 210/436 (48%), Gaps = 11/436 (2%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR++ +C+    K  ++ +A  +  + +  G   +VV    L+  YC+    D+   + +
Sbjct: 298 TRVIGVCM----KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFD 353

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M E GI P+ VTY  +I    +N  +  + ++ ++M    I P V++ NSL+    +  
Sbjct: 354 KMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKAR 413

Query: 127 KPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            P+EA+++F + + CG       T+N +L+ LCK      A  ++  + + G  P +V+Y
Sbjct: 414 SPEEASKLFDEAVACG--IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSY 471

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I G C+ G + +A  +  E+ + G  PN ITY+ +M   F+    +    +   M+ 
Sbjct: 472 NNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRG 531

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +      F    +I    K GR  E+ D ++++V +G     ++YN +I+ + KEG + +
Sbjct: 532 ENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNS 591

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +  EM K G   + +T+T LI+G CK+ N+  A   ++ M   G + ++  Y  ++D
Sbjct: 592 ALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALID 651

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              + G + +A  +   ++      +   YSSM+    K + + +A  L    +  G+  
Sbjct: 652 GFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPC 711

Query: 422 LKSAQKAVVDGLRHSG 437
                  ++ GL   G
Sbjct: 712 DLQIYTTLISGLLKEG 727



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 202/441 (45%), Gaps = 5/441 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  +LE+AE    +    GV  D   Y+++I+A C+     A   +L  MR+ G  P  V
Sbjct: 236 REGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEV 295

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            +  +I    +   +  ++ +  EML  G P +V    +LM    + G  D A  +F  M
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM 355

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P   T+ +++   CKN   D A  ++  ++     P +   N LI+G  KA   
Sbjct: 356 NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSP 415

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E    G A N  TY +++    +  K      I   M RKG       Y  +
Sbjct: 416 EEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    + G +  A     +M+  G++ ++++Y+ L++ Y K+G  E A+ L D M  +  
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T  I+I+GLCKAG    ++  L+ + + GF      YNCI+D   K+G ++ A+ 
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           V+  M       + FTY+++++  CK+  +  A K++      G+ +  +   A++DG  
Sbjct: 595 VYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654

Query: 435 HSGCRREAKKIQSKIRMAKIS 455
             G    A ++ S+++   +S
Sbjct: 655 RKGDMVNASQLLSELQEVGLS 675



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 171/356 (48%), Gaps = 35/356 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+   ++ A  + ++ +  G+ P+++TY++L+D Y +    +  + + +RMR   I+P  
Sbjct: 479 CQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            T N +I G  +    S S D L ++++ G  P   +YN ++    + G  + A  V+ +
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    ++P   T+  ++NG CK+   D AL++   ++  G   ++  Y  LI G C+ G 
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +L EL + G +PN + Y++++    + +  +  L +   M  +G   D   Y T
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY--------------------------- 290
           +I+  +K G+L  A++   +M+  G+  D+++Y                           
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778

Query: 291 --------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
                   NTLI  + KEG L+ A+ L +EM  +G   D  T+ IL++G  K GN+
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 148/293 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA R  +++  +   ++ G +P  +TYN +ID + +  S ++   +   M +
Sbjct: 542 NIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCK 601

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+V TY +LI G  +++ +  +L ++DEM   GI  DV  Y +L+    + G    
Sbjct: 602 IGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVN 661

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++  ++    L+P    ++ M++G  K +  + AL + + +   G   +L  Y  LI 
Sbjct: 662 ASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLIS 721

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K G+L  A  +  E+   G  P+ ITY+ ++       + +   +IL  M RK  T 
Sbjct: 722 GLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTP 781

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             F Y T+I    K G L+EA     +M+  G+  D  +Y+ L+N   K+G L
Sbjct: 782 TVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 148/325 (45%), Gaps = 3/325 (0%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L++    +    D   +N L++   +  + ++A   F  +I  D+ PC    NI L+ L 
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           KN     A  ++  +   G   +  T +++I+   + G+L  A    +E  + G   +A 
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y+ +++   +       L +L  M+ KG+      +  VI   +K G++ EA     +M
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           ++ G  +++V   TL+  YCK+G L++A  L D+M + G   +  T+ ++I+  CK GN+
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSFTYSSMV 395
             A      M        +   N ++    K    + A  +F+      + + FTY+S++
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLL 440

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVR 420
             LCK  ++  A  +    ++ GVR
Sbjct: 441 SWLCKEGKMSEACSIWEKMVRKGVR 465



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 174/396 (43%), Gaps = 5/396 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++   R      D   +N L+    +   ++ ++D  + ++E  I P +   N  +  L 
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +     EA  V+  M    +    AT ++M+    +    + A   FR  +  G   +  
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y+I+I+ +CK      A  +L+E+ D G  P+ + +T ++  C +  K    +++   M
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +     T++  + K G L  A +  ++M  +G+  + V+Y  +I   CK G +
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + AY + ++M+ +      +    LI G  KA + + A    +     G  +N+  YN +
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSL 439

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K+GK+  A +++E M  K       +Y++M+   C+   + SA+ + +  L+ G+
Sbjct: 440 LSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           +        ++DG    G    A  +  ++R   I+
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 225/453 (49%), Gaps = 16/453 (3%)

Query: 8   RLLNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           ++ ++  CT     FCK  R + A  I+      G + D  +YN+LI+AYC+    +   
Sbjct: 100 KIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEAL 159

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L+      ++P+  TY++++        L  ++ +LD  L+    PDV +   L+   
Sbjct: 160 RVLDH---TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDAT 216

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +     +A ++F +M      P   T+N+++ G CK    D A+   + L  +G   ++
Sbjct: 217 CKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDV 276

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEIL 240
           +++N++++ LC  GR   A  +L  +   G  P+ +T+  ++   F  +K  LG  L +L
Sbjct: 277 ISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN--FLCQKGLLGKALNVL 334

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + G+T +   +  +I  F     +  A +++E MV+ G   DIV+YN L+   CK+
Sbjct: 335 EMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKD 394

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK++ A ++L ++  +G      ++  +IDGL K G  + A   LE M   G   +L   
Sbjct: 395 GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITC 454

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             +V  L ++GK+  AI  F  ++      ++F Y+S++  LCKA++   A   L+  + 
Sbjct: 455 TSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVA 514

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +G +  +++   ++ G+ + G   EA K+ +++
Sbjct: 515 NGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 146/308 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK  RL++A   +      G   DV+++NM++ + C    +     +L  M  
Sbjct: 245 NVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLR 304

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P VVT+N LI    +  LL  +L++L+ M + G  P+  S+N L+         D 
Sbjct: 305 KGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDR 364

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + M+     P   T+NI+L  LCK+   D+A+ +   L   G  P L++YN +I 
Sbjct: 365 AIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 424

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K G+   A  +L+E+   G  P+ IT T+++    R  K    ++    +K  G   
Sbjct: 425 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKP 484

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y +++    K  +   A D++  MV +G +    SY TLI     EG  E A  L 
Sbjct: 485 NAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLS 544

Query: 311 DEMEKQGF 318
           +E+  +G 
Sbjct: 545 NELYSRGL 552



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 9/291 (3%)

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L + G+ +E +R  + M      P       ++   CK   T NA R+   L++ G V +
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR-KYKLGLEIL 240
             +YN+LI   CK+G +  A   L+ L  +  APNA TY  ++ C   +R K K  +++L
Sbjct: 139 ANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVL-CSLCDRGKLKQAMQVL 194

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
               +     D      +I A  K   + +A     +M   G + D+V+YN LI  +CKE
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKE 254

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+L+ A + L ++   G + D  +H +++  LC  G    A   L  M + G   ++  +
Sbjct: 255 GRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF 314

Query: 361 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
           N +++ L + G +  A+NV E M       +S +++ ++   C  K +  A
Sbjct: 315 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRA 365



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ++R  N  +  FC    +++A   +   +  G  PD+VTYN+L+ A C+    D    IL
Sbjct: 345 NSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 404

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +++   G SP +++YN++I G  +      +++LL+EM   G+ PD+ +  S++  L + 
Sbjct: 405 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 464

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA + F  +    + P    +N ++ GLCK + T  A+     +  +G  P   +Y
Sbjct: 465 GKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASY 524

Query: 186 NILIKGLCKAGRLRTARWILKELGDSG 212
             LIKG+   G    A  +  EL   G
Sbjct: 525 TTLIKGITYEGLAEEASKLSNELYSRG 551



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 75/169 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  +++ A  I+      G  P +++YN +ID   +    +    +L  M  
Sbjct: 385 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 444

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD++T  S++ G +R   +  ++     +   GI P+ + YNS+M  L +  +   
Sbjct: 445 KGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSL 504

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           A     DM+     P  A++  ++ G+      + A ++   L   G V
Sbjct: 505 AIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            ++ G L+E + ++E M   G   D+V+   LI  +CK G+ + A  ++  +E+ G   D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV-- 379
             ++ +LI+  CK+G I+ A   L  ++      N   Y+ ++  L   GK+  A+ V  
Sbjct: 139 ANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 380 --FESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +S    D  T + ++   CK   +  A KL 
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 229


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 2/376 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   + +AE ++    + GV PD V Y  +I  +C+  +  A   + + M
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           R   I PD+VTY S+I G  ++  +  + ++ +EML  G+ PD  +Y +L+    + G+ 
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEM 433

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  V   M+   LTP   T+  + +GLCKN   D A  +   + + G  P + TYN +
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + GLCK G +     +++E+  +G  P+ ITYTT+M    +  +     E+L  M  K  
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 +  ++  F   G L++    +E M+  G+  +  ++N+L+  YC +  + A   
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRL 367
           +   M  +G   D  T+ ILI G CKA N+K A  LH E + K G+      Y+ ++   
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK-GYSVTAATYDALIRGF 672

Query: 368 GKDGKIDHAINVFESM 383
            K  K   A  +FE M
Sbjct: 673 YKRKKFVEARKLFEEM 688



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 218/444 (49%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  ++ +A  +++     G  PDVV+Y +++  YC+    D    +++ ++ 
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD   YN++I    +N  +  +  LL  M + G+ PD   Y +++    +LG    
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F +M    + P   T+  +++G+CK+     A  MF  +   G  P+ VTY  LI 
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CKAG ++ A  +  ++   G  PN +TYT +     +N +  +  E+L  M RKG   
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y T++    KIG +++    ME+M   G   D ++Y TL++ YCK G++  A+ LL
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M  +  +    T  +L++G C +G ++     +E+M + G   N   +N ++ +    
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +     ++++M     + DS TY+ ++   CKA+ +  A  L    ++ G  +  +  
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
            A++ G        EA+K+  ++R
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEMR 689



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 166/321 (51%), Gaps = 2/321 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK+ ++ +A  +  + +  G+ PD VTY  LID YC+       +++ N+M + G++P+V
Sbjct: 393 CKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY +L  G  +N  +  + +LL EM   G+ P+V++YN++++ L ++G  ++  ++ ++
Sbjct: 453 VTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M      P T T+  +++  CK      A  + R +      P LVT+N+L+ G C +G 
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGM 572

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           L     +++ + + G  PNA T+ ++MK  C +N   +   EI  AM  +G   D   Y 
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKN-NMRATTEIYKAMHDRGVMPDSNTYN 631

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K   +KEA    ++MV  G  +   +Y+ LI  + K  K   A  L +EM K 
Sbjct: 632 ILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKH 691

Query: 317 GFECDKYTHTILIDGLCKAGN 337
           G   +K  + I +D   + GN
Sbjct: 692 GLVAEKDIYDIFVDVNYEEGN 712



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 169/361 (46%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCK   +  A  +  +  R  ++PD+VTY  +I   C+         + N M   G+
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD VTY +LI G  +   +  +  + ++M++ G+ P+V +Y +L   L + G+ D AN 
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M    L P   T+N ++NGLCK    +  +++   +   GF P+ +TY  L+   C
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G +  A  +L+ + +    P  +T+  +M     +   + G  ++  M  KG   +  
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + +++  +     ++  T+  + M   GV  D  +YN LI  +CK   ++ A+ L  EM
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G+     T+  LI G  K      AR   E M K G  +  + Y+  VD   ++G  
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNW 713

Query: 374 D 374
           +
Sbjct: 714 E 714



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 147/297 (49%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  +++A ++    ++ G+ P+VVTY  L D  C+    D    +L+ M   G+ P+
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYN+++ G  +   +  ++ L++EM   G  PD  +Y +LM    ++G+  +A+ + +
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR 546

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L P   TFN+++NG C +   ++  R+   + + G +P   T+N L+K  C   
Sbjct: 547 IMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKN 606

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +R    I K + D G  P++ TY  ++K   + R  K    +   M  KGY+     Y 
Sbjct: 607 NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +I  F K  +  EA    E+M   G+  +   Y+  +++  +EG  E    L DE 
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEF 723



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 174/370 (47%), Gaps = 12/370 (3%)

Query: 93  LSCSLDLLDEML-----EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           +S S  L  EML     + G  P V  ++     L + G   EA ++F  ++   +    
Sbjct: 149 VSKSFHLFTEMLIYTYKDWGSHPLV--FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSV 206

Query: 148 ATFNIMLNGL-CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
            + N+ L+ L C       A+++F    + G     V+ NI++  LC+ G++R A  +L 
Sbjct: 207 DSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLV 266

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           ++ D G+ P+ ++Y  ++    R  +    L+++  +K KG   D + Y  +I    K G
Sbjct: 267 QMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNG 326

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
            + EA   +  M   GV  D V Y T+I+ +CK G + AA  L DEM ++    D  T+T
Sbjct: 327 EVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYT 386

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            +I G+CK+G +  AR     M   G + +   Y  ++D   K G++  A +V   M  K
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446

Query: 387 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               +  TY+++   LCK   +  A++LL    + G++        +V+GL   G   + 
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506

Query: 443 KKIQSKIRMA 452
            K+  ++ +A
Sbjct: 507 VKLMEEMDLA 516



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 10/217 (4%)

Query: 248 YTFDGFGYCTVI-----AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-LYCKEG 301
           YT+  +G   ++        V+ G + EA     +++  GV + + S N  ++ L C   
Sbjct: 162 YTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFE 221

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            ++ A  + +E  + G   +  +  I++  LC+ G ++ A   L  M   G   ++ +Y 
Sbjct: 222 GIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +V    + G++D  + + + ++ K    D + Y++++  LCK   +  A +LL    K 
Sbjct: 282 VVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           GV         V+ G    G    A K+  ++R  KI
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI 378


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 188/374 (50%), Gaps = 2/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  ++ +AE ++ + I  G+ PD V Y  LID +C+  +  + Y + + M++
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ISPD +TY ++I G  +   +  +  L  EM+   + PD  +Y +L+    + GK  E
Sbjct: 287 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 346

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M+   LTP   T+  + +GLCK    D A  +   + + G    + TYN L+ 
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 406

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKAG +  A  ++K++  +G  P+A+TYTT+M    ++R+     E+L  M  +    
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               +  ++  F   G L++    ++ M+  G+  +  +YN+LI  YC    + A   + 
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             M  +G   D  T+ ILI G CKA N+K A  LH + + K GF+  + +YN ++    K
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK-GFNLTVSSYNALIKGFYK 585

Query: 370 DGKIDHAINVFESM 383
             K   A  +FE M
Sbjct: 586 RKKFLEARELFEQM 599



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 162/318 (50%), Gaps = 2/318 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+  R+ +A+ +  + +   + PD VTY  LID YC+       +++ N+M + G+
Sbjct: 300 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 359

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P++VTY +L  G  +   +  + +LL EM   G+  ++++YNSL++ L + G  D+A +
Sbjct: 360 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 419

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + +DM      P   T+  +++  CK+R    A  + R +      P +VT+N+L+ G C
Sbjct: 420 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 479

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDG 252
            +G L     +LK + + G  PNA TY +++K  C RN   +   EI   M  KG   DG
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN-NMRATTEIYRGMCAKGVVPDG 538

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I    K   +KEA      MV  G  L + SYN LI  + K  K   A  L ++
Sbjct: 539 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 598

Query: 313 MEKQGFECDKYTHTILID 330
           M ++G   D+  + I  D
Sbjct: 599 MRREGLVADREIYNIFAD 616



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 39/418 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+  TYN +I   C+         +L  M   GI+PD V Y +LI G  +   +S +
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L DEM +  I PD  +Y +++  L Q G+  EA+++F +M+C  L P   T+  +++G
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 337

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK      A  +   + + G  P +VTY  L  GLCK G + TA  +L E         
Sbjct: 338 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE--------- 388

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
                                     M RKG   + + Y +++    K G + +A   M+
Sbjct: 389 --------------------------MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   D V+Y TL++ YCK  ++  A+ LL +M  +  +    T  +L++G C +G
Sbjct: 423 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 482

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            ++     L++M + G   N   YN ++ +      +     ++  M     V D  TY+
Sbjct: 483 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYN 542

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++   CKA+ +  A  L    +  G  +  S+  A++ G        EA+++  ++R
Sbjct: 543 ILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 600



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+    N  V   CKA  +++A  ++ D    G  PD VTY  L+DAYC+       + 
Sbjct: 395 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 454

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M +  + P VVT+N L+ G   + +L     LL  MLE GI P+  +YNSL+    
Sbjct: 455 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 514

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                     +++ M    + P   T+NI++ G CK R    A  + R +   GF   + 
Sbjct: 515 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 574

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           +YN LIKG  K  +   AR + +++   G   +   Y       +   K +L LE+
Sbjct: 575 SYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 4/220 (1%)

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L+++  M+ KG   + + Y  VI    K G++ EA   + +M+++G+  D V Y TLI+ 
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +CK G + +AY L DEM+K+    D  T+T +I GLC+ G +  A      M     + +
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              Y  ++D   K+GK+  A ++   M       +  TY+++   LCK   + +A++LL 
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
              + G+ +      ++V+GL  +G   +A K+   + +A
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 427


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 203/414 (49%), Gaps = 6/414 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +FCK  ++++A  +++   ++G LP+ VTYN+L++        +    ++  M  
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     TY+ LI G      L  +  L +EML  G  P + +YN++M+ L + G+  +
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M+  +L P   ++N ++ G  +      A  +F  L+  G VP +VTYN LI 
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L  A  +  E+   G  P+  T+T +++   +     +  E+   M  +G   
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y T I   +K+G   +A    E+M+  G   D+++YN  I+   K G L+ A  L+
Sbjct: 434 DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELV 493

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +M   G   D  T+T +I     AG+++ AR + LE ++K G   ++  Y  ++     
Sbjct: 494 KKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSK-GIFPSVVTYTVLIHSYAV 552

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            G++  AI  F  M  K    +  TY+++++ LCK +++  A K        G+
Sbjct: 553 RGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 196/401 (48%), Gaps = 4/401 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P VVTYN ++D++C+         +L +M++ G  P+ VTYN L+ G + +  L  +
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L+ EML +G+    ++Y+ L+    + G+ DEA+R+ ++M+     P   T+N ++ G
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYG 304

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A ++   +     +P+LV+YN LI G  + G +  A  +  EL   G  P+
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY T++    R     + + +   M + G   D F +  ++  F K+G L  A +  +
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G+Q D  +Y T I    K G    A+ + +EM  +GF  D  T+ + IDGL K G
Sbjct: 425 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYS 392
           N+K A   ++ M   G   +   Y  I+      G +  A  VF  M  K  F    TY+
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYT 544

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ++H+     RL  A        + GV        A+++GL
Sbjct: 545 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 585



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 191/379 (50%), Gaps = 7/379 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+  A  ++   +   ++PD+V+YN LI  Y +  +    + +   +R 
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P VVTYN+LI G  R   L  ++ L DEM++ G  PDV+++  L+    +LG    
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   L P    +   + G  K      A  M   +   GF P+L+TYN+ I 
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K G L+ A  ++K++  +G  P+ +TYT+I+         +    +   M  KG   
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I ++   GRLK A  +  +M   GV  ++++YN LIN  CK  K++ AY   
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK-IGFDSNLEAYNCIVDRLG 368
            EM+ +G   +KYT+TILI+  C  G+ + A RL+ + +++ I  DS    ++ ++  L 
Sbjct: 599 TEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSC--THSALLKHLN 656

Query: 369 KDGK---IDHAINVFESME 384
           KD K   + H  NV  + E
Sbjct: 657 KDYKSHVVRHLENVIAAGE 675



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 195/408 (47%), Gaps = 5/408 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISP 75
           + K + LEK   +    +  G+LPD+   N ++     +  S D    + N M E GI P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            VVTYN+++    +   +  +L LL +M +MG  P+  +YN L++ L   G+ ++A  + 
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   L     T++ ++ G C+    D A R+   +   G VP LVTYN ++ GLCK 
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  AR +L  + +    P+ ++Y T++    R         + + ++ +G       Y
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTY 368

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    ++G L  A    ++M+  G   D+ ++  L+  +CK G L  A  L DEM  
Sbjct: 369 NTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLN 428

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G + D++ +   I G  K G+   A    E M   GF  +L  YN  +D L K G +  
Sbjct: 429 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 488

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           A  + + M     V D  TY+S++H    A  L  A  + L  L  G+
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGI 536



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 143/293 (48%), Gaps = 7/293 (2%)

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYT--DNALRMFRGLQKHGFVPELVTYNILIKG 191
           VF  M+   + P     N +L  L ++R +  D A  ++  + + G  P +VTYN ++  
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLR-LLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDS 199

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CK G+++ A  +L ++   G  PN +TY  ++     + + +   E++  M R G    
Sbjct: 200 FCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVS 259

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            + Y  +I  + + G+L EA+   E+M++ G    +V+YNT++   CK G++  A  LLD
Sbjct: 260 AYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLD 319

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M  +    D  ++  LI G  + GNI  A L    +   G   ++  YN ++D L + G
Sbjct: 320 VMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMG 379

Query: 372 KIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            +D A+ + + M       D FT++ +V   CK   LP A +L    L  G++
Sbjct: 380 DLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 369 KDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           +D  ID A  V+  M    ++ +  TY++M+ + CK  ++  A +LLL   K G      
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 425 AQKAVVDGLRHSGCRREAKK-IQSKIRMA 452
               +V+GL HSG   +AK+ IQ  +R+ 
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLG 255


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 179/367 (48%), Gaps = 8/367 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P   TYN +I + C+          L+ M  +G  PD  T+NSLI G  R + +  + DL
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            D+M   G   DV SY +L+  L + G+ DEA  +F +M   D+      +  ++ GLC 
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM----HMYAALVKGLCN 266

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               +  L M R +++ G+ P    Y  ++   C+  + + A  +L+E+ + G AP  +T
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
            T ++    +  +    L +L  MK +G   + + Y  ++  F   G++ +A   + +M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV  D V+YN LI   C +G +E+A+ LL  ME  G   D+YT+  LI+ LCK G   
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A    + +   G   N   +N +++ L K GK D A    E M       D++TYSS +
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 396 HNLCKAK 402
            +LCK K
Sbjct: 507 EHLCKMK 513



 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 222/474 (46%), Gaps = 30/474 (6%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           M  ++  + L  CV T       +CK  R+  A  ++      G  P+V TYN L+  +C
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                    T+LN+MR  G++PD VTYN LI G   +  +  +  LL  M   G+  D +
Sbjct: 371 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 430

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN+L++ L + G+ D+A  +F  +    + P   TFN ++NGLCK+   D A +    +
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P+  TY+  I+ LCK    +     + E+      P+ + YT ++    + R Y
Sbjct: 491 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 550

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
            L       M   G   D   Y T + A+   GRL EA + + +M  +GV +D ++YNTL
Sbjct: 551 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 610

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK------------AGNIKGA 341
           ++ +   G+ + A  +L +M       +++T+ IL+  L +            AG  K  
Sbjct: 611 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI 670

Query: 342 RLH-----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----Y 391
            L       + M K  F  N   Y+ I++   +DG+ + A ++   M+ +DS +     Y
Sbjct: 671 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK-EDSISLNEDIY 729

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +++V   CK+KR   A  L+ S ++ G      + + ++ GL   G   +AK+I
Sbjct: 730 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 783



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 8/354 (2%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           R A  +P   TYN++I    R + L+ +L  L  M+  G  PD +++NSL+    +  + 
Sbjct: 145 RHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 204

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  +F  M          ++  ++ GLC+    D A+ +F  + +    P++  Y  L
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 260

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +KGLC A R      +L+ + + G  P+   Y  ++    R RK K   E+L  M  KG 
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                    VI A+ K GR+ +A   +E M   G + ++ +YN L+  +C EGK+  A  
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL++M   G   D  T+ +LI G C  G+I+ A   L  M   G  ++   YN +++ L 
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 440

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           KDG+ D A ++F+S+E +    ++ T++S+++ LCK+ +   A K L   + +G
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 205/460 (44%), Gaps = 41/460 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C+   L +A   +   +R G  PD  T+N LI  YC+    D    + ++M  
Sbjct: 157 NAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 216

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--------------------------- 103
            G + DVV+Y +LI G      +  +++L  EM                           
Sbjct: 217 RGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLM 276

Query: 104 ----LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
                E+G  P   +Y +++    +  K  EA  + Q+M    L PC  T   ++N  CK
Sbjct: 277 LRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCK 336

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                +ALR+   ++  G  P + TYN L++G C  G++  A  +L ++   G  P+A+T
Sbjct: 337 EGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVT 396

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  +++    +   +    +L  M+  G   D + Y  +I A  K GR  +A    + + 
Sbjct: 397 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLE 456

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           T G++ + V++N+LIN  CK GK + A+  L++M   G   D YT++  I+ LCK   +K
Sbjct: 457 TRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK---MK 513

Query: 340 GARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
           G++  L ++ ++       +   Y  ++ +L K+         +  M       D  TY+
Sbjct: 514 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 573

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + +   C   RL  A  +L+   K+GV +   A   ++DG
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 4/390 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E+   ++     LG  P    Y  ++D  C+         +L  M E G++P 
Sbjct: 264 LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 323

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT  ++I    +   +S +L +L+ M   G  P+VW+YN+L+      GK  +A  +  
Sbjct: 324 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 383

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+N+++ G C + + ++A R+ R ++  G + +  TYN LI  LCK G
Sbjct: 384 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 443

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +   L   G  PNA+T+ +++    ++ K  +  + L  M   G T D + Y 
Sbjct: 444 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 503

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           + I    K+   +E   ++ +M+   V+   V+Y  +I+   KE           EM   
Sbjct: 504 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 563

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+T  +   C  G +  A   L  M+K G   +  AYN ++D     G+ DHA
Sbjct: 564 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 623

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAK 402
           +++ + M     V + FTY  ++ +L + +
Sbjct: 624 VSILKQMTSVASVPNQFTYFILLRHLVRMR 653



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 176/375 (46%), Gaps = 9/375 (2%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           + SL+A  +R +L   +L L   M     P P   +YN+++  L +      A R    M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P   TFN ++ G C+    D A  +F  +   GF  ++V+Y  LI+GLC+AGR+
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E+      P+   Y  ++K      + + GL +L  MK  G+      Y  V
Sbjct: 240 DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    +  + KEA + +++M   G+   +V+   +IN YCKEG++  A  +L+ M+ +G 
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           + + +T+  L+ G C  G +  A   L  M   G + +   YN ++     DG I+ A  
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 415

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           +   ME    + D +TY+++++ LCK  R   A  L  S    G++       ++++GL 
Sbjct: 416 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 475

Query: 435 HSGCRREAKKIQSKI 449
            SG    A K   K+
Sbjct: 476 KSGKADIAWKFLEKM 490



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 156/394 (39%), Gaps = 55/394 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R ++A ++       G+ P+ VT+N LI+  C+    D  +  L +M  
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG +PD  TY+S I    +       L  + EML+  + P   +Y  ++H L +      
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             R + +M+     P   T+   +   C     + A  +   + K+G   + + YN L+ 
Sbjct: 553 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 612

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA-------- 242
           G    G+   A  ILK++      PN  TY  +++   R R  +  L +  A        
Sbjct: 613 GHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 672

Query: 243 ---------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                    MK+  +  +   Y +++  F + GR +EAT  +  M  D + L+   Y  L
Sbjct: 673 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 732

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGF----------------------------------- 318
           +  +CK  +   A++L+  M + GF                                   
Sbjct: 733 VTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY 792

Query: 319 ECDKYTHTILIDGLCKAGNIKGAR---LHLEYMN 349
             D+    ++IDGL K G+   +R   + LE MN
Sbjct: 793 SPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 826



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 8/241 (3%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           AP A TY  +++   R       L  LS M R G+  D + + ++I  + +  ++  A D
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M   G   D+VSY TLI   C+ G+++ A  L  EM++     D + +  L+ GLC
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQP----DMHMYAALVKGLC 265

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SF 389
            A   +   L L  M ++G+  +  AY  +VD   ++ K   A  + + M  K       
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           T +++++  CK  R+  A ++L      G +       A+V G  + G   +A  + +K+
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 450 R 450
           R
Sbjct: 386 R 386


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 197/400 (49%), Gaps = 5/400 (1%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FCK   +++A  I+ + + R G+ PDVVTY  ++D  C+    D    ++  M+  G+ P
Sbjct: 55  FCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 114

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D  T+++LI G      +  +L L  E+L      D  S ++L+  L +  +  EA  +F
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174

Query: 136 QDMIC---GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           Q+M     G   P   T+  +++G CK+   + A++M   ++    VP +VTY+ L+ GL
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CKAG L  A  + + +   G  PN +TYTT++       K      ++  M       D 
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADT 294

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  ++  + ++GR++EA    ++M       D ++Y  L+  +C   +LE A  LL+ 
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354

Query: 313 ME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M+   G + D  T++I++ G  +A     A   ++ M       N   Y+ ++D L K G
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414

Query: 372 KIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +++HA+ V ++++  D  TY+ ++  LC   R   A  LL
Sbjct: 415 RVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLL 454



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 207/425 (48%), Gaps = 22/425 (5%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVVTY  LID +C+  + +    +L  M      P+VVTY+SL+ G  +   L  +LDL
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M   G  P+V +Y +L+H L    K D A  +  +M        T ++N +L+G C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD-SGHAPNAI 218
               + A ++F+ +     +P+ +TY  L++G C A RL  AR++L+ +   +G  P+ +
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+ ++    R +++    E +  M  +    +   Y ++I    K GR+  A + ++ +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
                + D+V+Y  +I   C   + E A  LL+EM  +  E    T   +I  LC+ G++
Sbjct: 427 ----DKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----------D 387
             A   L  M   G +  +  Y  +++   + G+++ A  +FE M  K            
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVP 542

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK---AVVDGLRHSGCRREAKK 444
              +S+++  LCKA+ +  A  ++   L+S  R  + A++   A+VDGL  +G   EA K
Sbjct: 543 EQAFSALIRGLCKAREIDKAMAVVEE-LRS--RECEPAEEDCLAIVDGLLRAGRTEEAGK 599

Query: 445 IQSKI 449
           + + I
Sbjct: 600 LINSI 604



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 204/417 (48%), Gaps = 20/417 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           FCK+  LEKA  ++  G+  G   +P+VVTY+ L+   C+    D    +  RM   G  
Sbjct: 199 FCKSGNLEKAMKML--GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 256

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+VVTY +LI G      +  +  L+DEM     P D  SYN+L+    +LG+ +EA ++
Sbjct: 257 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQL 316

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNILIKGLC 193
           F++M      P   T+  ++ G C     + A  +   ++   G  P++VTY+I++ G  
Sbjct: 317 FKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 376

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +A R   A   ++E+     APNA+TY++++    +  +    +E+L  + +     D  
Sbjct: 377 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----DVV 432

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI       R +EA   +E+MV   V+  + ++N++I   C+ G ++ A+ LL  M
Sbjct: 433 TYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 492

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS----NL---EAYNCIVDR 366
              G E    T+T L++G  + G ++ A    E M +    S    NL   +A++ ++  
Sbjct: 493 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRG 552

Query: 367 LGKDGKIDHAINVFESMEVKDSFTYS----SMVHNLCKAKRLPSASKLLLSCLKSGV 419
           L K  +ID A+ V E +  ++         ++V  L +A R   A KL+ S  K G+
Sbjct: 553 LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 206/414 (49%), Gaps = 10/414 (2%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISPDVVTYNSLIAGATRNSL 92
           +R  V P+  TYN++++  C+       Y +L  MR+   ++PD+VTY+++I G  +   
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 93  LSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
           +  + ++L EM+   G+ PDV +Y S++  L + GK D A  + ++M    + P   TF+
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-- 209
            ++ G C  R  D AL++++ +       + V+ + LI GLC+  R+  A  + +E+   
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 210 -DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            D    P+ +TYT ++    ++   +  +++L  M+ +    +   Y +++    K G L
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +A D   +M + G   ++V+Y TLI+  C   K++AA LL+DEM       D  ++  L
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           +DG C+ G I+ A+   + M       +   Y C+V       +++ A  + E+M+    
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 386 --KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              D  TYS +V    +AKR   A++ +   +   V        +++DGL  +G
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 13/206 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V  + +A R  +A   I + I   V P+ VTY+ LID  C+    +    +L  + +
Sbjct: 369 SIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK 428

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PDVVTY  +I G         +L LL+EM+   + P V ++NS++  L +LG  DE
Sbjct: 429 ----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDE 484

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG--------FVPEL 182
           A ++   M    L P   T+  +L G  +    + A  +F  +++           VPE 
Sbjct: 485 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ 544

Query: 183 VTYNILIKGLCKAGRLRTARWILKEL 208
             ++ LI+GLCKA  +  A  +++EL
Sbjct: 545 -AFSALIRGLCKAREIDKAMAVVEEL 569


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 203/414 (49%), Gaps = 3/414 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           N  +  +C  +RLE A  +I +    G  PD ++Y  ++   C+         ++ +M +
Sbjct: 306 NCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLK 365

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++ + PD VTYN+ +   +++     +L+ L E  E     D   Y++++H   + G+ D
Sbjct: 366 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMD 425

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M      P   T+  ++NGLC+ R  D A +M R + KHG  P  V+Y  L+
Sbjct: 426 KAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALL 485

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G    AR ++    +    PNAITY+ +M    R  K     +++  M +KG+ 
Sbjct: 486 NGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFF 545

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                   +I +  +  ++ EA  +MEQ + +G  +++V++ T+I+ +C++  LEAA  L
Sbjct: 546 PTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSL 605

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LD+M       D  T+T +ID L K G I+ A      M ++G       Y  ++ +  +
Sbjct: 606 LDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 665

Query: 370 DGKIDHAINVFESMEVKDS--FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            G+++  + + E M  +      Y+ ++  LC    L  A KLL   L++  +I
Sbjct: 666 MGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKI 719



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 204/444 (45%), Gaps = 7/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +      NRL+KA   +     + + P+V+TYN LI  YC     +    ++  M  
Sbjct: 271 NTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPF 330

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPD 129
            G SPD ++Y +++    +   +     L+++ML +  + PD  +YN+ +H L + G  D
Sbjct: 331 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 390

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA    ++            ++ +++  C+    D A  +   +   G +P++VTY  +I
Sbjct: 391 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 450

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+  ++  A+ +L+++   G  PN ++YT ++    +N       E+++  +   + 
Sbjct: 451 NGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWI 510

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++  F + G+  EA D + +M+  G     V  N LI   C+E K++ A   
Sbjct: 511 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 570

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +++    G   +    T +I G C+  +++ A   L+ M       ++  Y  I+D LGK
Sbjct: 571 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 630

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I+ A  +   M     +    TY +++H  C+  R+    KLL   L    +  ++A
Sbjct: 631 KGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTA 688

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              V++ L   G   +A K+  K+
Sbjct: 689 YNQVIEKLCSFGNLEQAYKLLGKV 712



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 199/431 (46%), Gaps = 9/431 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           + ++ +A +L  A  ++    + G+ PD+   N  I         D     L RM+   I
Sbjct: 239 MVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEI 298

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+V+TYN LI G      L  +++L+ EM   G  PD  SY ++M  L +  +  E   
Sbjct: 299 EPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRL 358

Query: 134 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           + + M+   +L P   T+N  ++ L K+ + D AL   R  ++  F  + V Y+ ++   
Sbjct: 359 LMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF 418

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           C+ GR+  A+ I+ E+   G  P+ +TYT+++    + RK     ++L  M + G   + 
Sbjct: 419 CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 478

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  ++    K G   EA + M     D    + ++Y+ L++ + +EGK   A  L+ E
Sbjct: 479 VSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVRE 538

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M K+GF        +LI  LC+   +  A+  +E     G   N+  +  ++    +   
Sbjct: 539 MIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDD 598

Query: 373 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           ++ A+++ + M +     D  TY++++  L K  R+  A+KL +  L+ G+       + 
Sbjct: 599 LEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRT 658

Query: 429 VVDGLRHSGCR 439
           V+    H  CR
Sbjct: 659 VI----HQYCR 665



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 155/349 (44%), Gaps = 42/349 (12%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P+ + Y  +M    + GK   A RV   M    + P  +  N  ++ L      D A+R 
Sbjct: 232 PEAFGY--VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
              +Q     P ++TYN LIKG C   RL  A  ++ E+   G +P+ I+Y T+M    +
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349

Query: 230 NRKYK------------------------------------LGLEILSAMKRKGYTFDGF 253
            ++ K                                      LE L   + + +  D  
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           GY  ++ +F + GR+ +A + + +M + G   D+V+Y ++IN  C+E K++ A  +L +M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K G + +  ++T L++GLCK GN   AR  +    +  +  N   Y+ ++    ++GK 
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 374 DHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSG 418
             A ++   M  K  F        ++ +LC+ +++  A + +  CL +G
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 578



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 130/277 (46%), Gaps = 7/277 (2%)

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN-AITYTTIMKCCFRNRKY 233
           +H  +     +  ++    +AG+LR A  +L  +  +G  P+ +I  T I      NR  
Sbjct: 225 RHDPIRRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLD 284

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           K  +  L  M+      +   Y  +I  +  + RL++A + + +M   G   D +SY T+
Sbjct: 285 K-AVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTV 343

Query: 294 INLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +   CKE +++   LL+++M K      D+ T+   +  L K G+   A   L    +  
Sbjct: 344 MGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERR 403

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
           F  +   Y+ IV    ++G++D A  +   M  K    D  TY+S+++ LC+ +++  A 
Sbjct: 404 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAK 463

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K+L    K G +    +  A+++GL  +G   EA+++
Sbjct: 464 KMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 500


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 200/424 (47%), Gaps = 8/424 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGY-TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           LP + + N+L+++   FV   A        +  AG  PD   +N ++        L  +L
Sbjct: 119 LPSLSSCNLLLESLL-FVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 98  DLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            +L  M   E   PPD +SYN ++  L++ GK  +A +VF +M+   + P   T+N M++
Sbjct: 178 AMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMID 237

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  K    +   R+   +   G  P +VTYN+L+ GLC+ GR+   R ++ E+      P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLP 297

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  TY+ +     R  + +  L + +   +KG     +    ++    K G++ +A    
Sbjct: 298 DGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVF 357

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E +V  G+    V YNTLIN YC+   L  A+ + ++M+ +    D  T+  LI+GLCK 
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             +  A   +  M K G D ++E +N ++D  G  G+++    V   M+ K    D  ++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            S+V   CK  ++P A  +L   +   V        +++D    SG   +A  +  K++ 
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537

Query: 452 AKIS 455
           + +S
Sbjct: 538 SGVS 541



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 209/431 (48%), Gaps = 4/431 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    ++ +   A  +  + + +GV P+ +TYN +ID + +    +AG+ + ++M  
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLH 257

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVTYN L++G  R   +  +  L+DEM    + PD ++Y+ L   L + G+   
Sbjct: 258 DGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQT 317

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F + +   +     T +I+LNGLCK+     A ++F  L   G VP  V YN LI 
Sbjct: 318 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLIN 377

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+   LR A  I +++      P+ ITY  ++    +        +++  M++ G   
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 437

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               + T+I A+   G+L++    +  M   G++ D++S+ +++  +CK GK+  A  +L
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D+M  +    +   +  +ID   ++G+ + A L +E M   G  +++  YN ++  L + 
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +ID A  +  ++  +    D  +Y++++   C       A +LL    K G+R      
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617

Query: 427 KAVVDGLRHSG 437
             +V  L  +G
Sbjct: 618 HTLVSALASAG 628



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD  +YN++I    +         + + M + G++P+ +TYN++I G  +   L     L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            D+ML  G  P+V +YN L+  L + G+ DE   +  +M    + P   T++I+ +GL +
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              +   L +F    K G +    T +IL+ GLCK G++  A+ + + L  +G  P  + 
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    + R  +    I   MK +    D   Y  +I    K+  + +A D + +M 
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV   + ++NTLI+ Y   G+LE  + +L +M+++G + D  +   ++   CK G I 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMV 395
            A   L+ M       N + YN I+D   + G  + A+ + E M+   V  S  TY+ ++
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVR 420
             LC++ ++  A +L+ +    G+R
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLR 576



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 173/393 (44%), Gaps = 35/393 (8%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+VVTYN+L+   C+    D    +++ M    + PD  TY+ L  G TR       
Sbjct: 259 GPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTM 318

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA-------- 148
           L L  E L+ G+    ++ + L++ L + GK  +A +VF+ ++   L P T         
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378

Query: 149 ---------------------------TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
                                      T+N ++NGLCK      A  +   ++K G  P 
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + T+N LI     AG+L     +L ++   G   + I++ +++K   +N K    + IL 
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M  K    +   Y ++I A+++ G  ++A   +E+M   GV   IV+YN L+   C+  
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +++ A  L+  +  QG   D  ++  +I   C  G+   A   L+ MNK G    L   +
Sbjct: 559 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCH 618

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
            +V  L   G++     +++ M  K+    SS+
Sbjct: 619 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 35/340 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  ++ KA+ +    +  G++P  V YN LI+ YCQ       + I  +M+   I PD
Sbjct: 344 LCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPD 403

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM----------HCLFQL- 125
            +TYN+LI G  +  +++ + DL+ EM + G+ P V ++N+L+           C   L 
Sbjct: 404 HITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLS 463

Query: 126 ------------------------GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                                   GK  EA  +  DMI  D+ P    +N +++   ++ 
Sbjct: 464 DMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESG 523

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            T+ AL +   ++  G    +VTYN+L+KGLC++ ++  A  ++  L + G  P+ ++Y 
Sbjct: 524 DTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYN 583

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           TI+  C         LE+L  M + G         T+++A    GR+ +     +QM+  
Sbjct: 584 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHK 643

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
            V+     Y  +++ Y +         L  EM ++G   D
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 213/449 (47%), Gaps = 4/449 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI   + C+  R+ +A  +++     G +PDV++Y+ +I+ YCQ         ++
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+ P+  TYN +I    +   ++ +  +L EM+  GI PD   Y +L+    +L
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G    A R+F +M    ++P   T+  ++ GLC+      A ++F  +      P+ VTY
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI G CK G+++ A  +  ++   G  PN +TYT +     +  +     E+L  M R
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG   + + Y +++    K G + +A   M+ M   G   D V+Y TL++ YCK  ++  
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+ LL +M  +  +    T  +L++G C +G ++     L++M + G   N   YN ++ 
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611

Query: 366 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           +      +     ++  M     V D  TY+ ++   CKA+ +  A  L    +  G  +
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             S+  A++ G        EA+++  ++R
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMR 700



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN-SLLSCSLDL 99
           D   +++      +    D    + ++M   G+   V + N  I+  + +   +  +L +
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             E  E+G+  +  SYN + H L QLG+  EA+++   M      P   +++ ++NG C+
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                  L++   +Q  G  P   TYN +I  LCK G++  A  +L+E+   G AP+ + 
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YTT++    +         +   M+++  + D   Y  VI    + GR+ EA     +MV
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              ++ D V+Y  LI+ YCKEGK++ A+ L ++M + G   +  T+T L DGLCK G + 
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A   L  M + G + N+  YN +V+ L K G ID A+ + + MEV     D+ TY++++
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              CK++ +  A +LL   L   ++        +++G   SG   + +K+
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 162/318 (50%), Gaps = 2/318 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+  R+ +A+ +  + +   + PD VTY  LID YC+       +++ N+M + G+
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P++VTY +L  G  +   +  + +LL EM   G+  ++++YNSL++ L + G  D+A +
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + +DM      P   T+  +++  CK+R    A  + R +      P +VT+N+L+ G C
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDG 252
            +G L     +LK + + G  PNA TY +++K  C RN   +   EI   M  KG   DG
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN-NMRATTEIYRGMCAKGVVPDG 638

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I    K   +KEA      MV  G  L + SYN LI  + K  K   A  L ++
Sbjct: 639 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698

Query: 313 MEKQGFECDKYTHTILID 330
           M ++G   D+  + I  D
Sbjct: 699 MRREGLVADREIYNIFAD 716



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 175/353 (49%), Gaps = 7/353 (1%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-RYT 163
           + G  P V  ++     L + G  DEA ++F  M+   L     + N+ ++ L ++    
Sbjct: 177 DWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 234

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL++F    + G      +YNI+   LC+ GR+  A  +L ++   G  P+ I+Y+T+
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  + +  L+++  M+ KG   + + Y  VI    K G++ EA   + +M+++G+
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V Y TLI+ +CK G + +AY L DEM+K+    D  T+T +I GLC+ G +  A  
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
               M     + +   Y  ++D   K+GK+  A ++   M       +  TY+++   LC
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           K   + +A++LL    + G+ +      ++V+GL  +G   +A K+   + +A
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 527



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+    N  V   CKA  +++A  ++ D    G  PD VTY  L+DAYC+       + 
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M +  + P VVT+N L+ G   + +L     LL  MLE GI P+  +YNSL+    
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                     +++ M    + P   T+NI++ G CK R    A  + R +   GF   + 
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 674

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           +YN LIKG  K  +   AR + +++   G   +   Y       +   K +L LE+
Sbjct: 675 SYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 192/390 (49%), Gaps = 4/390 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G   D V+Y  L++  C+         +L  + +    P+VV YN++I G  ++ L++ +
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            DL  EM   GI PD  +Y +L++    LG+   A  +  +MI  ++ P    +NI++N 
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINA 229

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK      A  +   + K G  P +VTY+ L+ G C  G ++ A+ I   +   G  PN
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             +Y  ++    + ++    + +L  M  K    D   Y ++I    K GR+  A + M 
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G   D+V+Y +L++  CK   L+ A  L  +M+++G +   YT+T LIDGLCK G
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +K A+   +++   G   ++  Y  ++  L K+G  D A+ +   ME    + ++ T+ 
Sbjct: 410 RLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFE 469

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            ++ +L +      A KLL   +  G+ +L
Sbjct: 470 IIIRSLFEKDENDKAEKLLHEMIAKGLLVL 499



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  + VT N+LI+ +C        +++L ++ + G  PD +T N+L+ G      +  S
Sbjct: 40  GIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKS 99

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   D  SY +L++ L ++G+   A ++ + +      P    +N +++G
Sbjct: 100 LHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDG 159

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++  + A  ++  +   G  P+ +TY  LI G C  G+L  A  +L E+      P 
Sbjct: 160 LCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPG 219

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y  ++    +    K    +L+ M ++G       Y T++  +  +G ++ A     
Sbjct: 220 VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV  GV  ++ SYN +IN  CK  +++ A  LL EM  +    D  T+  LIDGLCK+G
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   +  M+  G  +++  Y  ++D L K+  +D A  +F  M+ +      +TY+
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++  LCK  RL +A +L    L  G  I       ++ GL   G   EA  I+SK+ 
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 457



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 178/380 (46%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV YN +ID  C+    +  Y + + M   GI PD +TY +LI G      L  +  L
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSL 207

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           LDEM+   I P V+ YN L++ L + G   EA  +   M    + P   T++ +++G C 
Sbjct: 208 LDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL 267

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                NA ++F  + + G  P + +YNI+I GLCK  R+  A  +L+E+      P+ +T
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++    ++ +    L +++ M  +G   D   Y +++ A  K   L +AT    +M 
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+Q  + +Y  LI+  CK G+L+ A  L   +  +G   D +T+T++I GLCK G   
Sbjct: 388 ERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFD 447

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC 399
            A      M   G   N   +  I+  L +  + D A  +   M  K        V ++ 
Sbjct: 448 EALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVF 507

Query: 400 KAKRLPSASKLLLSCLKSGV 419
                  A KLL   +  G+
Sbjct: 508 VQNENDKAEKLLHEMIAKGL 527



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 199/410 (48%), Gaps = 4/410 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P ++ +N ++ +  +   +    ++  +M   GI  + VT N LI        ++ S  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L++G  PD  + N+LM  L   G+  ++      ++         ++  +LNGLCK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+++ R ++     P +V YN +I GLCK   +  A  +  E+   G  P+AIT
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YTT++       +      +L  M  K      + Y  +I A  K G +KEA + +  M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G++  +V+Y+TL++ YC  G+++ A  +   M + G   + Y++ I+I+GLCK   + 
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A   L  M       +   YN ++D L K G+I  A+N+   M    +  D  TY+S++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             LCK + L  A+ L +   + G++       A++DGL   G  + A+++
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 417



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 170/342 (49%), Gaps = 4/342 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P ++ +N ++    +      ++ L  +M   GI  +  + N L++C   LG+   +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   ++     P T T N ++ GLC       +L     +   GF  + V+Y  L+ GLC
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G  R A  +L+ + D    PN + Y TI+    +++      ++ S M  +G   D  
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I  F  +G+L  A   +++M+   +   +  YN LIN  CKEG ++ A  LL  M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K+G +    T++ L+DG C  G ++ A+     M ++G + N+ +YN +++ L K  ++
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 374 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           D A+N+   M     V D+ TY+S++  LCK+ R+ SA  L+
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 145/333 (43%), Gaps = 39/333 (11%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           TP    FN +L  L K +    A+ + + ++  G     VT NILI   C  G++  +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +L ++   G+ P+ IT  T+MK      + K  L     +  +G+  D   Y T++    
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE----------------------- 300
           KIG  + A   +  +     + ++V YNT+I+  CK+                       
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 301 ------------GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
                       G+L  A+ LLDEM  +      Y + ILI+ LCK GN+K A+  L  M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 404
            K G    +  Y+ ++D     G++ +A  +F +M       + ++Y+ M++ LCK KR+
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             A  LL   L   +        +++DGL  SG
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 116/241 (48%), Gaps = 12/241 (4%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H P  I +  I+    + ++Y   + +   M+ KG   +      +I  F  +G++  + 
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             + +++  G Q D ++ NTL+   C +G+++ +    D++  QGF+ D  ++  L++GL
Sbjct: 66  SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G  + A   L  +       N+  YN I+D L KD  ++ A +++  M+ +    D+
Sbjct: 126 CKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDA 185

Query: 389 FTYSSMVHNLCKAKRLPSASKLL----LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
            TY+++++  C   +L  A  LL    L  +  GV I       +++ L   G  +EAK 
Sbjct: 186 ITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYI----YNILINALCKEGNVKEAKN 241

Query: 445 I 445
           +
Sbjct: 242 L 242


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  A  +  +     V P+VVTY  LI  +C     D  + +LN M
Sbjct: 191 MYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               ++P+V T+N+L+ G  +   +  +  L+  M++ G+ PDV++YN+LM   F + + 
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 310

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  VF  M    +T    ++++M++GL K +  D A+ +F G++    +P++V Y+ L
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSL 370

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK+GR+ +A   + E+ D G  PN ITYT+++    ++ +    + +L  +K +G 
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + + Y  ++    K GRL +A    + ++  G  +D+V+Y+ +IN  CKE   + A  
Sbjct: 431 QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALT 490

Query: 309 LLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNKIGFDSN 356
           LL +ME +G   D   +  +I+    K  N K  +L  E ++ + +  N
Sbjct: 491 LLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKDN 539



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 207/418 (49%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  + +T N+LI++YC     ++ +++  ++ + G  PD++TY +LI G   N  +  S
Sbjct: 79  GIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKES 138

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L+  D ++  GI  D  SY +L++ L ++G+   A R+ + +      P    +N +++G
Sbjct: 139 LNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDG 198

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++   +A  ++  + +    P +VTY  LI G C  G+L  A  +L E+      PN
Sbjct: 199 LCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPN 258

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+ T++    +  K +    +++ M ++G   D F Y  ++  +  +    +A +   
Sbjct: 259 VCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFN 318

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  D+ SY+ +I+   K   L+ A  L + M  +    D   ++ LIDGLCK+G
Sbjct: 319 IMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSG 378

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A  +++ M+  G   N+  Y  ++D L K  ++D AI + + ++ +    + +TY+
Sbjct: 379 RINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYN 438

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +V  LCK  RL  A K+    L  G  +       +++GL       EA  + SK+ 
Sbjct: 439 ILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 496



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 212/475 (44%), Gaps = 74/475 (15%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI + ++C   ++  A ++    ++LG  PD++TY  LI   C            +R+ 
Sbjct: 87  LNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLV 146

Query: 70  EAGIS-----------------------------------PDVVTYNSLIAGATRNSLLS 94
             GI                                    PDVV YN++I G  ++ L+ 
Sbjct: 147 SQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVR 206

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + DL  EM E  + P+V +Y SL++    +G+ D+A  +  +M+  ++ P   TFN ++
Sbjct: 207 DAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLV 266

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLCK      A  +   + K G  P++ TYN L+ G           +++KE   +G A
Sbjct: 267 DGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY----------FLVKE---AGKA 313

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            N                      + + M + G T D   Y  +I+   K+  L EA D 
Sbjct: 314 KN----------------------VFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E M  + V  D+V+Y++LI+  CK G++ +A   +DEM  +G   +  T+T LID LCK
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
           +  +  A   L+ +   G  +N+  YN +VD L KDG++  A  VF+ + +K    D  T
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVT 471

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           YS M++ LCK      A  LL      G      A + +++         +A+K+
Sbjct: 472 YSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKL 526



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 4/349 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            NRM      P ++ +  ++    +       + L   M   GI  +  + N L++    
Sbjct: 37  FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCH 96

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           L + + A  VF  ++     P   T+  ++ GLC N     +L     L   G   + V+
Sbjct: 97  LRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVS 156

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCK G+   A  +L+++      P+ + Y TI+    +++  +   ++   M 
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF 216

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K    +   Y ++I  F  +G+L +A   + +MV   V  ++ ++NTL++  CKEGK+ 
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L+  M K+G   D +T+  L+DG         A+     M ++G   ++ +Y+ ++
Sbjct: 277 EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
             L K   +D A+++FE M     + D   YSS++  LCK+ R+ SA K
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 141/321 (43%), Gaps = 42/321 (13%)

Query: 118 LMHCLFQ-LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           L H  F  L   ++A   F  M+     P    F  +L  L K ++    + +F+ ++ H
Sbjct: 19  LSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELH 78

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G     +T NILI   C   ++ +A  +  ++   G+ P+ IT                 
Sbjct: 79  GIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIIT----------------- 121

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
                             Y T+I      G++KE+ ++ +++V+ G++LD VSY TLIN 
Sbjct: 122 ------------------YTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLING 163

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 355
            CK G+   A  LL ++E +    D   +  +IDGLCK   ++ A  L+ E   K  F  
Sbjct: 164 LCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVF-P 222

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+  Y  ++      G++D A  +   M +K    +  T++++V  LCK  ++  A  L+
Sbjct: 223 NVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLV 282

Query: 412 LSCLKSGVRILKSAQKAVVDG 432
              +K GV        A++DG
Sbjct: 283 AVMMKEGVGPDVFTYNALMDG 303



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 4/185 (2%)

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F  +  L +A D   +M+       I+ +  ++    K         L   ME  G + +
Sbjct: 24  FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSN 83

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T  ILI+  C    I  A      + K+G+  ++  Y  ++  L  +G++  ++N  +
Sbjct: 84  YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHD 143

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +  +    D  +Y ++++ LCK  +   A +LL        R        ++DGL    
Sbjct: 144 RLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDK 203

Query: 438 CRREA 442
             R+A
Sbjct: 204 LVRDA 208


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 165/320 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C+  R+  A   +   +   ++PD+V+YN LI  Y +  +F     + + +R 
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P VVTYN+LI G  R   L  +  + D+M++ G+ PDV ++  L+    Q+G    
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+   L P    +   + G  K      A  M   ++  GF P+L+TYN+LI 
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G    A  +++++   G  P+ +TYT+I+     +   +   E+ S M +KG   
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I ++   GRL  A  Y ++M   GV  ++++YN LI   CKE  ++ AY L 
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 311 DEMEKQGFECDKYTHTILID 330
            EME +G   +KYT+TILI+
Sbjct: 616 AEMESKGVSPNKYTYTILIN 635



 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 199/415 (47%), Gaps = 6/415 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            N  + + CK   + +A   ++D +R+ G  P+ V+YN+L++       FD    ++ +M
Sbjct: 210 FNTMMDSRCKEGEVGRA-VEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQM 268

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+     TYN LI G  +  +   + DL  EML  G  P V +YN++M+ L +LG+ 
Sbjct: 269 SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRV 328

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A R    M+  DL P   ++N ++ G  +      AL +F  L+    VP +VTYN L
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C+ G L  A+ +  ++   G  P+ +T+T +++   +     +  E+   M  +G 
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL 448

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T I   +K+G   +A    E+M  +G   D+++YN LIN  CK G  + A  
Sbjct: 449 KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANE 508

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L+ +M  +G   D  T+T +I     +G ++ A      M K G   ++  Y  ++    
Sbjct: 509 LVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYA 568

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             G++D A   F+ M+ K    +  TY+++++ LCK   +  A  L       GV
Sbjct: 569 VRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGV 623



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 8/406 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V         ++A+ +I     LG+     TYN LI  +C+   F+    +   M  
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P VVTYN+++    R   +S +   LD M+   + PD+ SYN+L++   +LG   E
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F ++   +L P   T+N +++G C+    D A  M   + KHG  P++VT+ IL++
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTT--IMKCCFRNRKYKLGLEILSAMKRKGY 248
           G C+ G L  A+ +  E+   G  P+ I YTT  + +    N     G++    MK +G+
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK--EEMKAEGF 483

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I    K+G   +A + +++M  +G+  D V+Y ++I+ +   G L  A  
Sbjct: 484 PPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE 543

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +M K+G      T+T+LI      G +  A+ + + M   G   N+  YN ++  L 
Sbjct: 544 VFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLC 603

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           K+  +D A N+F  ME K    + +TY+ +++     +    A KL
Sbjct: 604 KENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKL 649



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 191/439 (43%), Gaps = 14/439 (3%)

Query: 23  LEKAEAIIIDGIRLGVLP----------DVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           +EKA  + +DG  L VL            V   ++LI  + + +  +    +  +M   G
Sbjct: 108 MEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNG 167

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + PDV   N ++      S+++   ++   M++  I P + ++N++M    + G+   A 
Sbjct: 168 LLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAV 227

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V   M      P   ++N+++NGL      D A  +   +   G      TYN LI+G 
Sbjct: 228 EVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGF 287

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK      A  + +E+   G  P  +TY TIM    R  +       L  M  +    D 
Sbjct: 288 CKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDL 347

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I  + ++G   EA     ++ +  +   +V+YNTLI+  C+ G L+ A  + D+
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDD 407

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M K G   D  T TIL+ G C+ GN+  A+   + M   G   +  AY   +    K G 
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
              A  + E M+ +    D  TY+ +++ LCK      A++L+      G+        +
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527

Query: 429 VVDGLRHSGCRREAKKIQS 447
           ++     SG  R+A+++ S
Sbjct: 528 IIHAHLISGLLRKAEEVFS 546


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 211/446 (47%), Gaps = 28/446 (6%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  +L + + I+   I  G  P+   +N LI AYC+   +   Y +  +M + G  P  +
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385

Query: 79  TYNSLIAGATRNSLLSCS--LDLLD----EMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            YN  I     N     S  LDL++    EML++G+  +  + ++   CL   GK D+A 
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAF 445

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++  +M+     P  +T++ ++  LC     + A  +F  ++++G VP + TY ILI   
Sbjct: 446 KIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSF 505

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CKAG ++ AR    E+   G  PN +TYT ++    + ++  +  E+   M  +G   + 
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD----------------IVSYNTLINL 296
             Y  +I    K G++++A     +M  D    D                +++Y  L++ 
Sbjct: 566 VTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDG 625

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK  +++ A+ LLD M   G E ++  +  +IDG CK G ++ A+     M++ G+  N
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLL 411
           L  Y+  +D L KD ++D  + V   M +++S T     Y+ MV  LCK  +   A KL+
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKM-LENSCTPNVVIYTEMVDGLCKIGKTDEAYKLM 744

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSG 437
           L   + G         A++DG   SG
Sbjct: 745 LKMEEKGCNPNVVTYTAMIDGFGKSG 770



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 225/491 (45%), Gaps = 61/491 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A+++EKA ++  +  R G++P V TY +LID++C+           + M   G +P+
Sbjct: 470 LCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPN 529

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           VVTY +LI    +   +  + +L + ML  G  P+V +Y +L+  HC  + G+ ++A ++
Sbjct: 530 VVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC--KAGQIEKACQI 587

Query: 135 FQDMICGDLT-----------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           +  M  GD+                  P   T+  +++GLCK      A  +   +  HG
Sbjct: 588 YARMR-GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHG 646

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P  + Y+ +I G CK G+L+ A+ +  ++ + G++PN  TY++ + C F++ +  L L
Sbjct: 647 CEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVL 706

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++LS M     T +   Y  ++    KIG+  EA   M +M   G   ++V+Y  +I+ +
Sbjct: 707 KVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGF 766

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL------------ 345
            K GK+E    L  +M  +G   +  T+ +LI+  C  G +  A   L            
Sbjct: 767 GKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHI 826

Query: 346 ------------EYMNKIGFDSNLEA---------YNCIVDRLGKDGKIDHAINVFE--- 381
                       E++  IG    L           Y  ++D   K G+++ A+++ E   
Sbjct: 827 LSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEIS 886

Query: 382 ---SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
              S  V + + Y+S++ NL  A ++  A +L  S +   V    S    ++ GL     
Sbjct: 887 SSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDK 946

Query: 439 RREAKKIQSKI 449
            +EA ++   I
Sbjct: 947 WQEALQLSDSI 957



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 23/440 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  +  +A  +I +      +PD V YN ++   C+   F+    IL+RMR +   P
Sbjct: 255 SLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY  L++G  R   L     +L  M+  G  P+   +NSL+H   +      A ++F
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYT------DNALRMFRGLQKHGFVPELVTYNILI 189
           + MI     P    +NI +  +C N         D   + +  +   G V   V  +   
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           + LC AG+   A  I+ E+   G  P+  TY+ ++       K +    +   MKR G  
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
              + Y  +I +F K G +++A  + ++M+  G   ++V+Y  LI+ Y K  ++  A  L
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + M  +G + +  T+T LIDG CKAG I+ A      M      S+++ Y         
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKY--------- 603

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             K+DH      + E  +  TY ++V  LCKA R+  A +LL + L  G    +    AV
Sbjct: 604 -FKLDH-----NNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAV 657

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +DG    G  ++A+++ +K+
Sbjct: 658 IDGFCKIGKLQDAQEVFTKM 677



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 182/384 (47%), Gaps = 16/384 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + ++A  II + +  G +PD  TY+ +I   C     +  +++   M+  GI P 
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  +    DEML  G  P+V +Y +L+H   +  +   A+ +F+
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE 554

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF---RG------LQKHGFV-------P 180
            M+     P   T+  +++G CK    + A +++   RG      + K+  +       P
Sbjct: 555 MMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGP 614

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            ++TY  L+ GLCKA R++ A  +L  +   G  PN I Y  ++    +  K +   E+ 
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +GY+ + + Y + I    K  RL      + +M+ +    ++V Y  +++  CK 
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI 734

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK + AY L+ +ME++G   +  T+T +IDG  K+G I+        M   G   N   Y
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITY 794

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             +++    +G +D A  + + M+
Sbjct: 795 RVLINHCCSNGLLDEAYKLLDEMK 818



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 190/416 (45%), Gaps = 14/416 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N L+   C+   ++     L R+++ G  P   TYN+LI    R   L  +  +  EML 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
                D ++ +   + L + GK  EA  +  +    D  P T  +N M++GLC+    + 
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+ +   ++    +P +VTY IL+ G  + G+L   + IL  +   G  PN   + +++ 
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME-------QM 278
              ++R Y    ++   M + G    G+    +    V     + ++D ++       +M
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQ-PGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEM 416

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  GV L+ V+ +      C  GK + A+ ++ EM  +GF  D  T++ +I  LC A  +
Sbjct: 417 LDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKV 476

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
           + A    E M + G   ++  Y  ++D   K G I  A   F+ M  K    +  TY+++
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +H   KAK++P A +L    L  G +       A++DG   +G   +A +I +++R
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR 592



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 39/306 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +L+ A+ +       G  P++ TY+  ID   +    D    +L++M E   +P+
Sbjct: 661 FCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPN 720

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  ++ G  +      +  L+ +M E G  P+V +Y +++    + GK ++   +F+
Sbjct: 721 VVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR 780

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-----KH---------GFVPEL 182
           DM      P   T+ +++N  C N   D A ++   ++     KH         GF  E 
Sbjct: 781 DMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEF 840

Query: 183 VT-------------------YNILIKGLCKAGRLRTARWILKELGDS-GHA-PNAITYT 221
           +T                   Y ILI    KAGRL  A  +L+E+  S  HA  N   Y 
Sbjct: 841 ITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYA 900

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           ++++      K    LE+ ++M  K    +      +I   +K+ + +EA     Q+   
Sbjct: 901 SLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEAL----QLSDS 956

Query: 282 GVQLDI 287
             Q+DI
Sbjct: 957 ICQMDI 962



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 112/284 (39%), Gaps = 16/284 (5%)

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N  T    R FR       V E++  N+    LC    ++   W  +++G S H P    
Sbjct: 90  NIETHQFFRQFRNQLNDSLVVEVMN-NVKNPELC----VKFFLWAGRQIGYS-HTPQVFD 143

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
               +  C  N   ++ L+ L  +K   +         ++    + G    A + + ++ 
Sbjct: 144 KLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLK 203

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G +    +YN LI ++ +  KL+ AYL+  EM    F  D+YT +     LCK G  +
Sbjct: 204 DFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCR 263

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A   ++       D+    YN +V  L +    + A+++   M     + +  TY  ++
Sbjct: 264 EAFDLIDEAEDFVPDTVF--YNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILL 321

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
               +  +L    ++L   +  G        + + + L H+ C+
Sbjct: 322 SGCLRKGQLGRCKRILSMMITEGCY----PNREIFNSLIHAYCK 361


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 10/415 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   C   RL +A  ++   +  G +P+ +TY  L+   C     +   T+L R+ 
Sbjct: 245 FNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVP 304

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E     +VV +N++I     +  L  + +L + M   G PPD  +Y+ L+H L +LG+  
Sbjct: 305 EL----NVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLG 360

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++ ++M      P   T+ I+L+  C+N   DN   M   +   G    L  YN +I
Sbjct: 361 SAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMI 420

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             +CK  R+  A   ++E+   G+ P+  TY TI+     N + +    +   +  +G  
Sbjct: 421 CAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVV 480

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I A ++ G  ++A      MV  G  LDIVSYN LI   C++G ++ + +L
Sbjct: 481 ANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIML 540

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L EM ++G + +  ++ +LI  LCK   ++ A  L  E +N+     ++  YN +++ L 
Sbjct: 541 LSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ-ELTPDIVTYNTLINGLC 599

Query: 369 KDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           K G +  A+N+ E +  +D      TY+ ++   CKA+ L  AS LL   + SG+
Sbjct: 600 KMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGI 654



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 190/408 (46%), Gaps = 35/408 (8%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P   T+++   A C+    D   T+L  M   G  PD V Y ++I        ++ + 
Sbjct: 168 VPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAA 227

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            LLDEM  MG   DV ++N ++H L  LG+  EA R+   M+     P   T+  +L GL
Sbjct: 228 TLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGL 287

Query: 158 CKNRYTDNALRM-------------------------------FRGLQKHGFVPELVTYN 186
           C     + A  M                               +  +   G  P+  TY+
Sbjct: 288 CLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYS 347

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI GLCK GRL +A  +L+E+ D G AP+ +TYT ++    RN  +     +L  M  K
Sbjct: 348 ILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK 407

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G + +  GY  +I A  K  R+ +A  +M++M + G + DI +YNT+I   C   ++E A
Sbjct: 408 GLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEA 467

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L + +  +G   +  T+  LI  L + G+ + A      M   G   ++ +YN ++  
Sbjct: 468 EYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKA 527

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           L +DG +D +I +   M  K    ++ +Y+ ++  LCK +R+  A +L
Sbjct: 528 LCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALEL 575



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDE 130
            +SP   +YN+++A   R    +  L L   M+    +PP  ++++     L +LG+ DE
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M      P T  +  +++ LC     + A  +   +   G   ++ T+N ++ 
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYT 249
           GLC  GRLR A  ++  +   G  PNAITY  ++K  C  ++     +E    M  +   
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQ-----VEEARTMLGRVPE 305

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + TVI   +  G+LKEA +  E M + G   D  +Y+ LI+  CK G+L +A  L
Sbjct: 306 LNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKL 365

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EME +GF     T+TIL+   C+ G     R  LE M+  G   NLE YN ++  + K
Sbjct: 366 LREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCK 425

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           D ++D A+   + M+ +    D  TY++++++LC   ++  A  L  + L  GV      
Sbjct: 426 DRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAIT 485

Query: 426 QKAVVDGLRHSGCRREA 442
              ++  L  +G  ++A
Sbjct: 486 YNTLIHALLRNGSWQDA 502



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 167/324 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  RL  A  ++ +    G  P +VTY +L+ ++C+   +D    +L  M +
Sbjct: 347 SILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSD 406

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+S ++  YN +I    ++  +  ++  + EM   G  PD+ +YN++++ L    + +E
Sbjct: 407 KGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEE 466

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++++   +     T+N +++ L +N    +A+ +   +  HG   ++V+YN LIK
Sbjct: 467 AEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIK 526

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC+ G +  +  +L E+ + G  PN ++Y  ++    + R+ +  LE+   M  +  T 
Sbjct: 527 ALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTP 586

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I    K+G +  A + +E++  + V  DI++YN LI+ +CK   L  A +LL
Sbjct: 587 DIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLL 646

Query: 311 DEMEKQGFECDKYTHTILIDGLCK 334
           +     G   ++ T  I++    +
Sbjct: 647 NRAVTSGITPNERTWGIMVQNFVR 670



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 156/328 (47%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD  TY++LI   C+     +   +L  M + G +P +VTY  L+    RN +    
Sbjct: 338 GCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNI 397

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +L+ M + G+  ++  YN ++  + +  + D+A R  Q+M      P   T+N ++  
Sbjct: 398 RAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYH 457

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC N   + A  +F  L   G V   +TYN LI  L + G  + A  +  ++   G + +
Sbjct: 458 LCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLD 517

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++Y  ++K   R+      + +LS M  KG   +   Y  +I+   K  R+++A +  +
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+   +  DIV+YNTLIN  CK G + AA  LL+++  +    D  T+ ILI   CKA 
Sbjct: 578 EMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKAR 637

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            +  A + L      G   N   +  +V
Sbjct: 638 LLHDASMLLNRAVTSGITPNERTWGIMV 665


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  177 bits (449), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 209/441 (47%), Gaps = 47/441 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-----GVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N  V   CKANR+++A  +  D  +      G  PDV++Y+ +IDA C+    D  Y   
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            RMR  G +P+VVTY+SLI G  +    S  L+LL  M E G   ++  +N+++H L++ 
Sbjct: 244 KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            + ++A + F+ ++     P   T+N+ ++GLCK    D A R+   + +    P+++TY
Sbjct: 304 DEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITY 363

Query: 186 NILIKGLCKAGRL-----------------------------------RTARWILKELGD 210
           + +I G CKAGR+                                   R A  + +++ +
Sbjct: 364 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           +G  P   TY  +M C       +  LEI   MKRK    D   Y  +I    +  R+ E
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDE 483

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A ++++ M  D V  +    + L+ + CK+G+++ A  +LD + + G +    T  IL++
Sbjct: 484 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVE 543

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
            L      + A    + +   GF ++   Y+  V  + K GK D A+ V E M +K    
Sbjct: 544 ELYLRKKWEAAS---KLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRP 600

Query: 387 DSFTYSSMVHNLCKAKRLPSA 407
           D  TY +++ +LC   R+ SA
Sbjct: 601 DEGTYVAVLRSLCGLDRVESA 621



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 209/424 (49%), Gaps = 47/424 (11%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G + G   +  T  +L++A+ +    +  + +L    E    P+ + Y ++I G  +   
Sbjct: 67  GNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQ 126

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  + +LLDEM E G+  DV  +++L+  L + G+ DEA   F+ M   + +P   T+N 
Sbjct: 127 VDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNT 185

Query: 153 MLNGLCKNRYTDNALRMFRGLQK-----HGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           ++NGLCK    D AL +F  ++K     HG  P++++Y+ +I  LCKA R+  A    K 
Sbjct: 186 VVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 245

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +   G APN +TY++++    +  +    LE+L  MK KG+  +   +  ++ A  K   
Sbjct: 246 MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 305

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
            ++A  + E+++  G + ++V+YN  ++  CK G+++ AY +L EM +     D  T++ 
Sbjct: 306 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 328 LIDGLCKAGNIKGA------------------------------------RLHLEYMNKI 351
           +IDG CKAG +  A                                    R+H + +N  
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA- 424

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
           GF   L+ YN ++D +     ++ A+ ++  M+ K    D  TY+ ++  LC+A+R+  A
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484

Query: 408 SKLL 411
            + L
Sbjct: 485 KEFL 488



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 182/442 (41%), Gaps = 68/442 (15%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--------------------- 54
             CKA R++KA         +G  P+VVTY+ LID  C+                     
Sbjct: 229 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGI 288

Query: 55  -FVSFDA-------------GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
             + F+A                   R+ ++G  P+VVTYN  + G  +   +  +  +L
Sbjct: 289 NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRIL 348

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM+E  + PDV +Y+S++    + G+ D+A+ VF  M+  +  P   TF  +L+G  ++
Sbjct: 349 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 408

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           + +  A R+   +   GF+P L TYN+L+  +C A  + +A  I  ++      P+  TY
Sbjct: 409 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTY 468

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             +++C  R R+     E L  M+      +G     ++    K G + EA   ++ +V 
Sbjct: 469 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528

Query: 281 DGVQ--------------------------------LDIVSYNTLINLYCKEGKLEAAYL 308
            G Q                                 D  +Y+  +   CK GK + A  
Sbjct: 529 VGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVE 588

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           ++++M  +G   D+ T+  ++  LC    ++ A    E M   G    L  Y  ++    
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEAC 648

Query: 369 KDGKIDHAINVFESMEVKDSFT 390
                D A  +FE+M V   FT
Sbjct: 649 SADMADEAFRIFEAM-VAAGFT 669



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 159/343 (46%), Gaps = 3/343 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   CKA R+++A  I+++ +   V PDV+TY+ +ID +C+    D    +  RM  
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P  VT+ +L+ G + +     +  + ++M+  G  P + +YN LM C+      + 
Sbjct: 389 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++  M      P   T+  ++  LC+ R  D A      ++    VP     + L++
Sbjct: 449 ALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 508

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK G +  A  +L  + + G  P   T+  +++  +  +K++   ++L   +  G+  
Sbjct: 509 VLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLL---RSPGFVA 565

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y   +A   K G+  EA + +EQMV  GV+ D  +Y  ++   C   ++E+A    
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++M  +G      T+T+LI   C A     A    E M   GF
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGF 668



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 155/340 (45%), Gaps = 45/340 (13%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G   + ++   L++   +  + +EA+R+ ++ +     P    +  ++NG CK    D A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
             +   +++ G   +++ ++ LI+GLC+ GR+  A    K +G+   +PN ITY T++  
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC-SPNVITYNTVVN- 188

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-----VTD 281
                                      G C       K  R+ EA +  + M      + 
Sbjct: 189 ---------------------------GLC-------KANRIDEALELFDDMEKRYEASH 214

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + D++SY+T+I+  CK  +++ AY     M   G   +  T++ LIDGLCK       
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE----SMEVKDSFTYSSMVHN 397
              L +M + GF  N+  +N ++  L K+ + + A   FE    S +  +  TY+  VH 
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           LCKA R+  A ++LL  ++S V        +++DG   +G
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 374



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 13/329 (3%)

Query: 139 ICGDLTPCTATFNIMLNG--LCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKA 195
           +C DL    +T    + G  L +    D A   F+    K GF     T  +L+    KA
Sbjct: 30  LCRDLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKA 89

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A  +LKE  +    PN I YTT++    +  +     E+L  MK +G   D   +
Sbjct: 90  KRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLH 149

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    + GR+ EA +  + M  +    ++++YNT++N  CK  +++ A  L D+MEK
Sbjct: 150 STLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEK 208

Query: 316 Q-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +     G E D  +++ +ID LCKA  +  A  + + M  +G   N+  Y+ ++D L K 
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV 268

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +    + +   M+ K    +   +++M+H L K      A +     LKSG +      
Sbjct: 269 DRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 328

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              V GL  +G   EA +I  ++  +K++
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVT 357



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A R+++A+  +       V+P+    + L++  C+    D   ++L+ + E G  P 
Sbjct: 475 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPL 534

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T+  L+           +  LL      G   D  +Y+  +  + + GKPDEA  V +
Sbjct: 535 GETFKILVEELYLRKKWEAASKLLRSP---GFVADAATYSLCVAEICKAGKPDEAVEVIE 591

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   + P   T+  +L  LC     ++A+  F  +   G  P LVTY +LI   C A 
Sbjct: 592 QMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 651

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
               A  I + +  +G  P A T  T +  C R+  Y+
Sbjct: 652 MADEAFRIFEAMVAAGFTPQAQTMRT-LSSCLRDAGYQ 688



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 53/119 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++CV   CKA + ++A  +I   +  GV PD  TY  ++ + C     ++      +M  
Sbjct: 571 SLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMAS 630

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            G +P +VTY  LI  A    +   +  + + M+  G  P   +  +L  CL   G  D
Sbjct: 631 RGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 218/481 (45%), Gaps = 37/481 (7%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  L N+ + +  K  R+E    +  D +  G+ P   T+N+LI A C     DA   
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M E G  P+  T+  L+ G  +  L    L+LL+ M   G+ P+   YN+++    
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV---- 179
           + G+ D++ ++ + M    L P   TFN  ++ LCK     +A R+F  ++   ++    
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  +TYN+++KG CK G L  A+ + + + ++    +  +Y   ++   R+ K+     +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L  M  KG     + Y  ++    K+G L +A   +  M  +GV  D V+Y  L++ YC 
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GK++AA  LL EM +     + YT  IL+  L K G I  A   L  MN+ G+  +   
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEV---------------------------KDSFTYS 392
            N IVD L   G++D AI + + M V                            D  TYS
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++++ LCKA R   A  L    +   ++    A    +    H  C++   KI S  R+ 
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI----HHFCKQ--GKISSAFRVL 582

Query: 453 K 453
           K
Sbjct: 583 K 583



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 219/480 (45%), Gaps = 31/480 (6%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  NI +    +  +  +AE ++      G+ P + +YN+L+D  C+        TI+
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+ PD VTY  L+ G      +  +  LL EM+     P+ ++ N L+H L+++
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------- 178
           G+  EA  + + M        T T NI+++GLC +   D A+ + +G++ HG        
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504

Query: 179 ----------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
                           +P+L+TY+ L+ GLCKAGR   A+ +  E+      P+++ Y  
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
            +    +  K      +L  M++KG       Y ++I       ++ E    M++M   G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  +I +YNT I   C+  K+E A  LLDEM ++    + ++   LI+  CK  +   A+
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684

Query: 343 LHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHN 397
              E    I G    L  Y+ + + L   G++  A  + E++  +     +F Y  +V +
Sbjct: 685 EVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 456
           LCK   L  AS +L   +  G     +A   V+DGL   G ++EA     K + MA +  
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGE 802



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 206/450 (45%), Gaps = 32/450 (7%)

Query: 2   FGKLSTRLL-NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG L  +++ N  V +FC+  R + +E ++      G++PD+VT+N  I A C+      
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270

Query: 61  GYTILNRMR---EAGIS-PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
              I + M      G+  P+ +TYN ++ G  +  LL  +  L + + E      + SYN
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
             +  L + GK  EA  V + M    + P   ++NI+++GLCK     +A  +   ++++
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P+ VTY  L+ G C  G++  A+ +L+E+  +   PNA T   ++   ++  +    
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL----------- 285
            E+L  M  KGY  D      ++      G L +A + ++ M   G              
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510

Query: 286 ------------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
                       D+++Y+TL+N  CK G+   A  L  EM  +  + D   + I I   C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           K G I  A   L+ M K G   +LE YN ++  LG   +I     + + M+ K    +  
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY++ +  LC+ +++  A+ LL   ++  +
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 16/424 (3%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           L V+      N +  A+ QF         L R R     P V  YN L+    +   +  
Sbjct: 79  LSVVSIFAKSNHIDKAFPQFQ--------LVRSRFPENKPSVYLYNLLLESCIKERRVEF 130

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
              L  +M+  GI P  +++N L+  L      D A  +F +M      P   TF I++ 
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK   TD  L +   ++  G +P  V YN ++   C+ GR   +  +++++ + G  P
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY----TFDGFGYCTVIAAFVKIGRLKEA 271
           + +T+ + +    +  K      I S M+   Y      +   Y  ++  F K+G L++A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
               E +  +     + SYN  +    + GK   A  +L +M  +G     Y++ IL+DG
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           LCK G +  A+  +  M + G   +   Y C++      GK+D A ++ + M     + +
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           ++T + ++H+L K  R+  A +LL    + G  +       +VDGL  SG   +A +I  
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490

Query: 448 KIRM 451
            +R+
Sbjct: 491 GMRV 494


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 178/341 (52%), Gaps = 1/341 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + +  +   CK   + +A  +  +    G+  DVVTY+ LI  +C          
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG 255

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +LN M    I+P+V TYN L+    +   +  +  +L  ML+  + PDV +Y++LM   F
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + +  +A  VF  M    +TP   T+ I++NG CKN+  D AL +F+ + +   VP +V
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ LI GLCK+GR+     ++ E+ D G   + ITY++++    +N      + + + M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +    + F +  ++    K GRLK+A +  + ++T G  L++ +YN +IN +CK+G L
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLL 495

Query: 304 EAAYLLLDEMEKQGFECDKYT-HTILIDGLCKAGNIKGARL 343
           E A  +L +ME  G   + +T  TI+I    K  N K  +L
Sbjct: 496 EEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 6/419 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD++T N+LI+ +C       G+++L ++ + G  PD VT N+LI G      +  +
Sbjct: 89  GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
           L   D++L  G   +  SY +L++ + ++G    A ++ +  I G LT P    ++ +++
Sbjct: 149 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK-IDGRLTKPNVEMYSTIID 207

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK +    A  +F  +   G   ++VTY+ LI G C  G+L+ A  +L E+      P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TY  ++    +  K K    +L+ M +     D   Y T++  +  +  +K+A    
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M   GV  D+ +Y  LIN +CK   ++ A  L  EM ++       T++ LIDGLCK+
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTY 391
           G I      ++ M   G  +++  Y+ ++D L K+G +D AI +F  M   E++ + FT+
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++  LCK  RL  A ++    L  G  +       +++G    G   EA  + SK+ 
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 185/384 (48%), Gaps = 39/384 (10%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+V  Y+ +IDA C++      Y + + M   GIS DVVTY++LI G      L  ++ L
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM+   I P+V++YN L+  L + GK  EA  V   M+   + P   T++ +++G   
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A  +F  +   G  P++ TY ILI G CK   +  A  + KE+      P  +T
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y++++                             G C       K GR+    D +++M 
Sbjct: 377 YSSLID----------------------------GLC-------KSGRIPYVWDLIDEMR 401

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D+++Y++LI+  CK G L+ A  L ++M+ Q    + +T TIL+DGLCK G +K
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A+   + +   G+  N+  YN +++   K G ++ A+ +   ME    + ++FT+ +++
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521

Query: 396 HNLCKAKRLPSASKLLLSCLKSGV 419
             L K      A KLL   +  G+
Sbjct: 522 IALFKKDENDKAEKLLRQMIARGL 545



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 4/406 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +  FC   ++    +++   ++ G  PD VT N LI   C            +++ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   + V+Y +LI G  +      ++ LL ++      P+V  Y++++  L +     
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +M    ++    T++ ++ G C       A+ +   +      P + TYNIL+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G+++ A+ +L  +  +   P+ ITY+T+M   F   + K    + +AM   G T
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I  F K   + EA +  ++M    +   IV+Y++LI+  CK G++   + L
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           +DEM  +G   D  T++ LIDGLCK G++  A      M       N+  +  ++D L K
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            G++  A  VF+ +  K    + +TY+ M++  CK   L  A  +L
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 187/400 (46%), Gaps = 4/400 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   +  NRM     +P ++ +N ++    +    S ++ L   +   GI PD+ + N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C   +G+      V   ++     P T T N ++ GLC       AL     L   GF
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
               V+Y  LI G+CK G  R A  +L+++      PN   Y+TI+    + +       
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + S M  KG + D   Y T+I  F   G+LKEA   + +MV   +  ++ +YN L++  C
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           KEGK++ A  +L  M K   + D  T++ L+DG      +K A+     M+ +G   ++ 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  +++   K+  +D A+N+F+ M  K+      TYSS++  LCK+ R+P    L+   
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              G         +++DGL  +G    A  + +K++  +I
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 198/410 (48%), Gaps = 4/410 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P ++ +N ++D++ +   +    ++ +R+   GI PD++T N LI        ++    +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L ++L+ G PPD  + N+L+  L   G+  +A      ++         ++  ++NG+CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T  A+++ R +      P +  Y+ +I  LCK   +  A  +  E+   G + + +T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++       K K  + +L+ M  K    + + Y  ++ A  K G++KEA   +  M+
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              V+ D+++Y+TL++ Y    +++ A  + + M   G   D +T+TILI+G CK   + 
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    + M++      +  Y+ ++D L K G+I +  ++ + M    +  D  TYSS++
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             LCK   L  A  L        +R        ++DGL   G  ++A+++
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 35/192 (18%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ R+     +I +    G   DV+TY+ LID  C+    D    + N+M++  I P+
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + T+  L+ G  +   L  + ++  ++L  G   +V++Y                     
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY--------------------- 482

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                         N+M+NG CK    + AL M   ++ +G +P   T+  +I  L K  
Sbjct: 483 --------------NVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528

Query: 197 RLRTARWILKEL 208
               A  +L+++
Sbjct: 529 ENDKAEKLLRQM 540


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 190/385 (49%), Gaps = 43/385 (11%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+R  E    PDV+TY  LI      S +  ++ LLDEM   G  PDV           
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDV----------- 51

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                                    T+N+++NG+CK    D A++    +  +G  P ++
Sbjct: 52  ------------------------VTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVI 87

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILS 241
           T+NI+++ +C  GR   A  +L E+   G +P+ +T+  ++   F  RK  LG  ++IL 
Sbjct: 88  THNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN--FLCRKGLLGRAIDILE 145

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G T +   Y  ++  F K  ++  A  Y+E MV+ G   DIV+YNT++   CK+G
Sbjct: 146 KMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDG 205

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K++AA  LL+++  +G      T+  +IDGL K G    A   L  M   G   ++  Y+
Sbjct: 206 KVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYS 265

Query: 362 CIVDRLGKDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L ++GK++ AI  F  +E   VK ++FTY+S++  LCKA++   A   L   +  
Sbjct: 266 SLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISK 325

Query: 418 GVRILKSAQKAVVDGLRHSGCRREA 442
           G +  + +   +++G+ + G  +EA
Sbjct: 326 GCKPTEVSYTILIEGIANEGLAKEA 350



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 174/344 (50%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV+TY +LI+A C          +L+ M   G  PDVVTYN L+ G  +   L  ++  
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ M   G  P+V ++N ++  +   G+  +A ++  +M+    +P   TFNI++N LC+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+ +   +  HG  P  ++YN L+ G CK  ++  A   L+ +   G  P+ +T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    ++ K    +E+L+ +  KG +     Y TVI    K+G+  +A + + +M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G++ D+++Y++LI    +EGK+E A     ++E  G + + +T+  ++ GLCKA    
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A   L YM   G      +Y  +++ +  +G    A+ +   +
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 3/315 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PDVVTYN+L++  C+    D     LN M   G  P+V+T+N ++           +
Sbjct: 46  GCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDA 105

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             LL EM+  G  P V ++N L++ L + G    A  + + M     TP + ++N +L+G
Sbjct: 106 EKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK +  D A++    +   G  P++VTYN ++  LCK G++  A  +L +L   G +P 
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV 225

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY T++    +  K    +E+L  M+ KG   D   Y ++IA   + G+++EA  +  
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH 285

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   GV+ +  +YN+++   CK  + + A   L  M  +G +  + ++TILI+G+   G
Sbjct: 286 DVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEG 345

Query: 337 NIKGARLHLEYMNKI 351
             K A   LE +N++
Sbjct: 346 LAKEA---LELLNEL 357



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 151/307 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   CK  RL++A   +      G  P+V+T+N+++ + C    +     +L  M  
Sbjct: 55  NVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVR 114

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP VVT+N LI    R  LL  ++D+L++M   G  P+  SYN L+H   +  K D 
Sbjct: 115 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR 174

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +  + M+     P   T+N ML  LCK+   D A+ +   L   G  P L+TYN +I 
Sbjct: 175 AIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVID 234

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K G+   A  +L E+   G  P+ ITY++++    R  K +  ++    ++  G   
Sbjct: 235 GLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKP 294

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y +++    K  +   A D++  M++ G +   VSY  LI     EG  + A  LL
Sbjct: 295 NAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354

Query: 311 DEMEKQG 317
           +E+  +G
Sbjct: 355 NELCSRG 361



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 137/273 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   R   AE ++ + +R G  P VVT+N+LI+  C+         IL +M  
Sbjct: 90  NIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPT 149

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ ++YN L+ G  +   +  ++  L+ M+  G  PD+ +YN+++  L + GK D 
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   +     +P   T+N +++GL K   TD A+ +   ++  G  P+++TY+ LI 
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIA 269

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G++  A     ++   G  PNA TY +IM    + ++    ++ L+ M  KG   
Sbjct: 270 GLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKP 329

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
               Y  +I      G  KEA + + ++ + GV
Sbjct: 330 TEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 40/284 (14%)

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           R L+K  + P+++TY ILI+  C    +  A  +L E+G  G  P+ +TY  ++      
Sbjct: 6   RQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN----- 59

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                                  G C       K GRL EA  ++  M + G Q +++++
Sbjct: 60  -----------------------GMC-------KEGRLDEAIKFLNSMPSYGSQPNVITH 89

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N ++   C  G+   A  LL EM ++G      T  ILI+ LC+ G +  A   LE M  
Sbjct: 90  NIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPT 149

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            G   N  +YN ++    K+ K+D AI   E M  +    D  TY++M+  LCK  ++ +
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           A +LL      G   +      V+DGL   G   +A ++  ++R
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 85/180 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  +++ A  ++      G  P ++TYN +ID   +    D    +L+ MR 
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDV+TY+SLIAG +R   +  ++    ++   G+ P+ ++YNS+M  L +  + D 
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      MI     P   ++ I++ G+        AL +   L   G V +     ++++
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 219/440 (49%), Gaps = 40/440 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI----------DAYCQ 54
           +S  +LNI   ++C  +R++ A +++   ++ G+  +VVT+N L+          DA   
Sbjct: 95  ISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVL 154

Query: 55  FVSF--------------------------DAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           F                             +   ++L  M +    PDV TY+ +I    
Sbjct: 155 FKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALC 214

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           ++  L  +++LL+EM +  IPP++++YNSL+  L +LG+ ++   +  +M+  ++ P   
Sbjct: 215 KDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVH 274

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           TF+I+++GLCK    ++A  + R + + G  P+++TY+ ++ G C  G++  AR +   L
Sbjct: 275 TFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVL 334

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            D G  PN  +Y+ ++    + +     +++   + +KG   D   Y T++   +++GR+
Sbjct: 335 RDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRI 394

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +A    ++M+  G   DI  ++TL+  Y K G +E A LL  ++E+   + +   +T++
Sbjct: 395 GDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVV 454

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           I+GLCK   ++ A    E +  IG   ++  YN ++    ++G  D    +   ME    
Sbjct: 455 INGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGC 514

Query: 385 VKDSFTYSSMVHNLCKAKRL 404
             ++ TY+ ++    ++ ++
Sbjct: 515 PANNITYNVIMQGFFRSNKI 534



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 172/344 (50%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV TY+++IDA C+ ++ DA   +LN M++  I P++ TYNSLI G  +         L
Sbjct: 201 PDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTL 260

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L EM+ + I P+V +++ L+  L + GK ++A+ V + MI   + P   T++ +++G C 
Sbjct: 261 LSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCL 320

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A R+F  L+  G  P + +Y+ILI G CK   L  A  +  E+   G  P+ +T
Sbjct: 321 RGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+TI+       +     +I   M R G T D   + T++  + K G ++EA     ++ 
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +    +I  Y  +IN  CK  ++  A+ + +++   G   D  T+ ++I G C+ G   
Sbjct: 441 RNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFD 500

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             +  L  M   G  +N   YN I+    +  KI   ++  + M
Sbjct: 501 EVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 190/378 (50%), Gaps = 5/378 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K   R  +I +   CK   L+ A  ++ +  +  + P++ TYN LID  C+   ++   T
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M    I+P+V T++ LI G  +   +  + +++  M+E G+ PD+ +Y+++M    
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+ D A RVF  +    + P   +++I++NG CK +    A+++F  + + G  P+ V
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ ++ GL + GR+  A+ I  E+   G  P+   ++T++   F+    +  + + S +
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +R     +   Y  VI    K  R++EA    E++ + G+  D+ +YN +I  +C+EG  
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           +    +L +ME  G   +  T+ +++ G  ++  I      ++ M   GF  +      +
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559

Query: 364 VDRLGKDGKI-----DHA 376
           ++ L ++  I     DH+
Sbjct: 560 INVLKENPSIVDMIPDHS 577



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 198/410 (48%), Gaps = 5/410 (1%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N++ ++YC     D  +++L    + GI  +VVT+N+L+ G    + ++ ++ L  +++ 
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 106 MGI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             I  P+   Y ++M+ L + G  ++   + + M  G+  P   T++I+++ LCK+   D
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +   +++    P + TYN LI GLCK G+    + +L E+ +    PN  T++ ++
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  K +   E++  M  KG   D   Y  ++  +   G++  A      +   G++
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +I SY+ LIN YCK+  L  A  L  E+ ++G + D  T++ ++ GL + G I  A+  
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCK 400
            + M ++G   ++  ++ ++    K G ++ A+ +F  +E     T    Y+ +++ LCK
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCK 460

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             R+  A  +       G+         ++ G    G   E K I  K+ 
Sbjct: 461 NDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 183/401 (45%), Gaps = 40/401 (9%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L+ A ++    +R+  LP V+ ++ L         + A  ++   MR  GI       N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           +         + C+  +L   L+ GIP +V ++N+L+  LF   K  +A  +F+ ++   
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 143 L-TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           +  P    +  ++NGL K  +T+  L + R +++    P++ TY+I+I  LCK   L  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
                                              + +L+ MK+K    + F Y ++I  
Sbjct: 223 -----------------------------------INLLNEMKQKNIPPNIFTYNSLIDG 247

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             K+G+ ++    + +MV   +  ++ +++ LI+  CKEGK+E A  ++  M ++G E D
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T++ ++DG C  G +  AR     +   G   N+ +Y+ +++   K   +  A+ +F 
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG 367

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +  K    D+ TYS+++H L +  R+  A K+    L+ G
Sbjct: 368 EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 162/360 (45%), Gaps = 5/360 (1%)

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
           S L  ++ L   M+ M   P V  ++ L   +  +        +F++M    +    +  
Sbjct: 41  SCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSIL 100

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-G 209
           NI+ N  C     D A  +     K G    +VT+N L+ GL    ++  A  + K+L  
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           +    PN + Y T+M    +    +  L +L  M++     D   Y  VI A  K   L 
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A + + +M    +  +I +YN+LI+  CK G+ E    LL EM       + +T +ILI
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DGLCK G ++ A   + +M + G + ++  Y+ I+D     G++D A  VF  +  K   
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            + F+YS +++  CK K L  A +L     + G++        ++ GL   G   +AKKI
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/323 (20%), Positives = 132/323 (40%), Gaps = 32/323 (9%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A  +F  M+     P    F+ +   +   ++    + +FR ++  G        NI+
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
               C   R+  A  +L     +G   N +T+ T++   F   K    + +   + R+  
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 249 -TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y TV+    K G  ++    +  M     + D+ +Y+ +I+  CK+  L+AA 
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL+EM+++    + +T+  LIDGLCK G  +  +  L  M  +  + N+          
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVH--------- 274

Query: 368 GKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
                                 T+S ++  LCK  ++  A +++   ++ GV        
Sbjct: 275 ----------------------TFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYS 312

Query: 428 AVVDGLRHSGCRREAKKIQSKIR 450
           A++DG    G    A+++ + +R
Sbjct: 313 AIMDGYCLRGQVDRARRVFNVLR 335


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 207/430 (48%), Gaps = 4/430 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC   ++ +A       I +G   D V+Y  LI+  C+     A   +L R     + PD
Sbjct: 273 FCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPD 332

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV YN++I G  ++  ++ + DL  E +   I PDV++YN+L+     +GK  +A  +F 
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFN 392

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   ++ P   TF+I+++G CK+     A  +   + K    P++VTY+ L+ G C   
Sbjct: 393 KMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVN 452

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  I   +   G   N  +Y  ++    + +     +++   M  K    D   Y 
Sbjct: 453 EVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYS 512

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    K GR+  A + +++M   G Q DI++YN++++  CK+  ++ A  LL +++ Q
Sbjct: 513 SLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQ 572

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+TIL+ GLC++G ++ AR   E +   G++ ++ AY  ++      G  D A
Sbjct: 573 GIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEA 632

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + +   ME    + D+ TY  ++ +L +      A KLL   +  G+ +  +        
Sbjct: 633 LALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASIL 692

Query: 433 LRHSGCRREA 442
           +R + C R A
Sbjct: 693 VRRTWCARLA 702



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 166/324 (51%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +  A  +  + +   + PDV TYN LI  +C          + N+M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               I PDV T++ L+ G  ++  +  + ++L  M++  I PDV +Y+SLM     + + 
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +F  M    +T    ++NIM+NG CK +  D A+++F+ +      P+++TY+ L
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK+GR+  A  ++ E+   G  P+ ITY +I+    +       + +L+ +K +G 
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  ++    + G+L++A    E ++  G  LD+ +Y  +I  +C +G  + A  
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 309 LLDEMEKQGFECDKYTHTILIDGL 332
           LL +ME+ G   D  T+ I+I  L
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSL 658



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 185/388 (47%), Gaps = 4/388 (1%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           ++ + G  PD +T  + I G      +  +L   D+++ MG   D  SY +L++ L ++G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +   A  + +      + P    +N +++G+CK+++ ++A  ++         P++ TYN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G C  G+L+ A  +  ++      P+  T++ ++    ++   K    +L+ M ++
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D   Y +++  +  +  + +A      M   GV  ++ SYN +IN +CK   ++ A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  EM  +    D  T++ LIDGLCK+G I  A   ++ M+  G   ++  YN I+D 
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K   +D AI +   ++ +    D  TY+ +V  LC++ +L  A K+    L  G  + 
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             A   ++ G    G   EA  + SK+ 
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKME 640



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 14/333 (4%)

Query: 1   MFGKLSTR-------LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K++++         +I V  FCK   +++A+ ++   ++  + PDVVTY+ L+D YC
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                +   +I N M   G++ +V +YN +I G  +  ++  ++ L  EM    I PDV 
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y+SL+  L + G+   A  +  +M      P   T+N +L+ LCK  + D A+ +   L
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  G  P++ TY IL+KGLC++G+L  AR + ++L   G+  +   YT +++       +
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL----DIVS 289
              L +LS M+  G   D   Y  +I +  +      A   + +M+  G+ +    D+V+
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVA 689

Query: 290 YNTLINLYCKEGKLEAAY--LLLDEME-KQGFE 319
              +   +C    L   +  LLL  +E K GF+
Sbjct: 690 SILVRRTWCARLALWVTFISLLLRVIELKPGFD 722



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 154/307 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC   +L+ A  +        ++PDV T+++L+D +C+  +      +L  M +
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I PDVVTY+SL+ G    + ++ +  + + M   G+  +V SYN +++   ++   DE
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F++M    + P   T++ +++GLCK+     AL +   +   G  P+++TYN ++ 
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK   +  A  +L +L   G  P+  TYT ++K   ++ K +   ++   +  KGY  
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G   EA   + +M  +G   D  +Y  +I    ++ + + A  LL
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLL 671

Query: 311 DEMEKQG 317
            EM  +G
Sbjct: 672 REMIMRG 678


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 191/405 (47%), Gaps = 5/405 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+VV Y  +ID   +    + G      M  +   P   TY  +I G  +  +L  +
Sbjct: 138 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 197

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             + ++M++ G  PD  +Y +L+    +  K DEA ++   M+     P   T+  +++G
Sbjct: 198 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 257

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + A  +   +++ G  P L  +  L+      GR   A  +L E+   G AP+
Sbjct: 258 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 317

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            I YT+++   F   +      +  +M  KG   D   Y T+I  F KIG ++ A + +E
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE 377

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  D  +YN+L++ Y K  +++ A+ + D M   G + +  T  +L+ GL K G
Sbjct: 378 LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDG 437

Query: 337 NIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
               A  L  E + K      L +Y  ++D LGK G++  A   F+ M     + +  TY
Sbjct: 438 KTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTY 497

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           +S++++L KA R+P A KL+   +K GV     A  A++ GL  S
Sbjct: 498 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 542



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 220/468 (47%), Gaps = 36/468 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN---- 66
           N  +      +++++A       I  G  PDV+ +  LI  +C+      G+ +LN    
Sbjct: 11  NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALK 70

Query: 67  RMR--------------EAG---------ISP----DVVTYNSLIAGATRNSLLSCSLDL 99
           R R              +AG         ++P    DV++Y ++I G   +  +  + +L
Sbjct: 71  RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACEL 130

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +E+   G  P+V +Y +++  L + G+ ++  + F++M      P   T+ ++++GLCK
Sbjct: 131 FEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCK 190

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +   +A ++F  + + G VP+ +TY  LI G  KA ++  AR +L  +   G  P A+T
Sbjct: 191 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 250

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +I+    +        E+++ M+ +G     F + ++++ ++  GR +EA   + +M 
Sbjct: 251 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D++ Y +LI+L    G++  A  + D M ++G   D  T+  +I    K GN++
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A   LE M K G   +  AYN ++D   K  ++D A  V++ M       ++ T++ ++
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430

Query: 396 HNLCKAKRLPSASKLLLSCL-KSGVRILKSAQKAVVDGLRHSGCRREA 442
           H L K  +   A  L    L K  V     +   ++DGL  +G   EA
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 177/381 (46%), Gaps = 36/381 (9%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +P   TY ++ID  C+         +  +M + G  PD +TY +LI G ++ S +  +  
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           LLD ML  G  P   +Y S++H   +L   +EA  V   M      P    F  +L+   
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                + A ++   +   G  P+++ Y  LI  L   GR+  AR +   + + G AP+A+
Sbjct: 295 SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDAL 354

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY TI++   +    +   EIL  M + G   D F Y +++  +VK+ R+ +A    ++M
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGL----- 332
           V  G++ + V++N L++   K+GK + A+ L  EM EK+       ++TILIDGL     
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGR 474

Query: 333 ------------------------------CKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
                                          KAG I  A+  +E M K+G + +++AY+ 
Sbjct: 475 VSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSA 534

Query: 363 IVDRLGKDGKIDHAINVFESM 383
           ++  L     +D A +VF+ M
Sbjct: 535 LITGLIDSSMVDTAWDVFQEM 555



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 188/438 (42%), Gaps = 37/438 (8%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G  P +V+YN +I         D  Y   N M + G  PDV+ + +LI G  +      
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG----------------------------- 126
              LL++ L+    PDV+ Y S++H   + G                             
Sbjct: 61  GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 127 ---KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              + DEA  +F+++     +P    +  +++GL K    ++ L+ F  +     VP   
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY ++I GLCKA  L  A  + +++   G  P+ ITYTT++    +  K     ++L  M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG       Y +++  F K+  + EA + + QM   G +  +  + +L++ Y  +G+ 
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E AY +L EM  +G   D   +T LID L   G +  AR   + M + G   +   Y  I
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    K G ++ A  + E M       D F Y+S++    K +R+  A  +    + SG+
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 420 RILKSAQKAVVDGLRHSG 437
           +        ++ GL   G
Sbjct: 420 KPNAVTFNVLMHGLFKDG 437



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 36/321 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +    R E+A  ++ +    G  PDV+ Y  LID             + + M E G +PD
Sbjct: 293 YLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 352

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TY ++I   ++   +  + ++L+ M + G+ PD ++YNSLM    +L + D+A  V+ 
Sbjct: 353 ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYD 412

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKA 195
            M+   + P   TFN++++GL K+  TD A  +F+  L+K    P LV+Y ILI GL KA
Sbjct: 413 RMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKA 472

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A    +E+ D G  P   TYT++                                
Sbjct: 473 GRVSEAFLQFQEMIDRGIIPECHTYTSL-------------------------------- 500

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
              I +  K GR+ EA   +E MV  GV  D+ +Y+ LI        ++ A+ +  EM K
Sbjct: 501 ---IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK 557

Query: 316 QGFECDKYTHTILIDGLCKAG 336
           +G   ++ T+ +L  G   AG
Sbjct: 558 RGCAPNEVTYKVLRRGFRAAG 578



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 138/283 (48%), Gaps = 6/283 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T L+++   T     R+ +A  +    I  G  PD +TY  +I  + +  + +A   I
Sbjct: 320 LYTSLIDLLFST----GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 375

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M ++G+ PD   YNSL+ G  +   +  +  + D M+  GI P+  ++N LMH LF+
Sbjct: 376 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 435

Query: 125 LGKPDEANRVFQDMICGDLTPCT-ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            GK D A  +F++M+  +  P T  ++ I+++GL K      A   F+ +   G +PE  
Sbjct: 436 DGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECH 495

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  LI  L KAGR+  A+ +++++   G  P+   Y+ ++     +       ++   M
Sbjct: 496 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 555

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            ++G   +   Y  +   F   GR  +  + ++Q  + GV ++
Sbjct: 556 MKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQHFSQGVAME 597



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 10/276 (3%)

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P +V+YN +I GL    ++  A      + D+G  P+ I +TT++    +  + ++G ++
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 240 LS-AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           L+ A+KR  +  D F Y +VI  + K G L   T Y  + VT    LD++SY T+I    
Sbjct: 65  LNQALKR--FRPDVFLYTSVIHGYCKAGDLD--TGYF-RAVTPKASLDVISYTTVIKGLA 119

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
              +++ A  L +E++  G   +   +T +IDGL KAG I+    + E M+         
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D L K   +  A  VFE M     V D+ TY++++    KA ++  A KLL   
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           L  G         ++V G        EAK++ +++R
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 203/391 (51%), Gaps = 11/391 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA R E    +  +    G+ PDVV Y  LID+ C+         ++++M E G+ P+
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    +   +  ++ L + MLE G+  D  +YN+L+  L  + + DEA  + +
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 137 DMICGD--LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +MI G+  + P   TFN +++GLCK      A ++   + ++G    LVT+N+LI GL +
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             +++ A  ++ E+  SG  P++ TY+ ++    +  +      +LS M+R G   +   
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  ++AA  + G +++A ++ ++M  +  +LD+V+Y+T+I+  C+    ++A   L  M 
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   D  T+++LI+    +G++  A   L+ M   GF  ++  ++ ++   G  G  +
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTE 551

Query: 375 HAINVFESMEVKD--------SFTYSSMVHN 397
             + +   M  KD        S  Y+ +V N
Sbjct: 552 KVLELIREMTAKDIALDSKIISTIYTCLVAN 582



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 214/444 (48%), Gaps = 16/444 (3%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C   R  +A  ++ D    GV PDVVTY  LI   C     D    +L  M E+GI P
Sbjct: 122 ALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEP 181

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VV Y+ L+ G  +     C   + +EM   GI PDV  Y  L+  L + GK  +A +V 
Sbjct: 182 NVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVM 241

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   L P   T+N+++N +CK      A+ +   + + G   + VTYN LI GL   
Sbjct: 242 DKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGV 301

Query: 196 GRLRTARWILKEL--GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             +  A  +L+E+  G++   PN +T+ +++    +  + +   ++   M   G   +  
Sbjct: 302 LEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLV 361

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +  +I   +++ ++K+A + M++M + G++ D  +Y+ LIN +CK  +++ A  LL +M
Sbjct: 362 TFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKM 421

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK------IGFDSNLEAYNCIVDRL 367
            + G E +   +  L+  LC+ G ++ AR   + M+K      + + + +     + DR 
Sbjct: 422 RRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRK 481

Query: 368 GKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
             +  + H ++  E + + DS TYS +++    +  L +A ++L     SG         
Sbjct: 482 SAEEFLKHMLD--EGL-IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGF----VPDV 534

Query: 428 AVVDGL-RHSGCRREAKKIQSKIR 450
           AV D L +  G + + +K+   IR
Sbjct: 535 AVFDSLIKGYGAKGDTEKVLELIR 558



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 196/445 (44%), Gaps = 45/445 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLP---DVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGIS 74
           + NRL +   +      L  LP   D V+YN ++ A C Q    DA   +L  M      
Sbjct: 52  RLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TR 110

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P  V+Y +L+           ++ LL +M   G+ PDV +Y +L+  L      D+A  +
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            ++M    + P    ++ +L G CK    +   ++F  +   G  P++V Y  LI  LC+
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G+++ A  ++ ++ + G  PN +TY  ++    +    K  + + + M  KG   D   
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLDIVSYNTLINLYCKEGKLEAAYL---- 308
           Y T+I     +  + EA   +E+M+     V+ ++V++N++I+  CK G++  A+     
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350

Query: 309 -------------------------------LLDEMEKQGFECDKYTHTILIDGLCKAGN 337
                                          L+DEM   G E D +T++ILI+G CK   
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSM 394
           +  A   L  M + G +  L  Y  ++  L + G ++ A N F+ M      D   YS+M
Sbjct: 411 VDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTM 470

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGV 419
           +H  C+ +   SA + L   L  G+
Sbjct: 471 IHGACRLRDRKSAEEFLKHMLDEGL 495



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 196/396 (49%), Gaps = 16/396 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C+  +++KA  ++   +  G+ P+VVTYN+LI++ C+  S     ++ N M E G++ 
Sbjct: 227 SLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVAL 286

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEML--EMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           D VTYN+LI G +    +  ++ LL+EM+  E  + P+V ++NS++H L + G+  +A +
Sbjct: 287 DAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQ 346

Query: 134 VFQDMICGDLTPCT-ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           V +DM+  +   C   TFN+++ GL +      A+ +   +   G  P+  TY+ILI G 
Sbjct: 347 V-RDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGF 405

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK  ++  A  +L ++   G  P  + Y  ++         +        M  K    D 
Sbjct: 406 CKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDV 464

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I    ++   K A ++++ M+ +G+  D V+Y+ LIN++   G L AA  +L +
Sbjct: 465 VAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQ 524

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK--IGFDSNLEA--YNCIVDRLG 368
           M   GF  D      LI G    G+ +     +  M    I  DS + +  Y C+V    
Sbjct: 525 MTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLV--AN 582

Query: 369 KDGK-IDHAINVFESM----EVKDSFTYSSMVHNLC 399
            +GK +  ++  F++      V  S   ++M+H LC
Sbjct: 583 NEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLC 618



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 161/350 (46%), Gaps = 10/350 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-- 68
           N+ + + CK   +++A ++  + +  GV  D VTYN LI      +  D    +L  M  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  + P+VVT+NS+I G  +   +  +  + D M E G   ++ ++N L+  L ++ K 
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +  +M    L P + T++I++NG CK    D A  +   +++ G  PELV Y  L
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LC+ G +  AR    E+  +    + + Y+T++    R R  K   E L  M  +G 
Sbjct: 437 LAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I  F   G L  A   ++QM   G   D+  +++LI  Y  +G  E    
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555

Query: 309 LLDEMEKQGFECD-KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           L+ EM  +    D K   TI     C   N +G  L     +  GFD+ +
Sbjct: 556 LIREMTAKDIALDSKIISTIYT---CLVANNEGKAL---LQSVPGFDTEV 599



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 133/274 (48%), Gaps = 6/274 (2%)

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           V + V+YN ++  LC+ G    A   L  +      P A++YTT+M+     R+    + 
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M+  G   D   Y T+I        + +A + + +M   G++ ++V Y+ L+  YC
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G+ E    + +EM  +G E D   +T LID LC+ G +K A   ++ M + G + N+ 
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 359 AYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN +++ + K+G +  A+    N+ E     D+ TY++++  L     +  A  LL   
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 415 LKSGVRILKSAQ--KAVVDGLRHSGCRREAKKIQ 446
           +     +  +     +V+ GL  +G  R+A +++
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 198/413 (47%), Gaps = 6/413 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +C  C+   +E+A  +  + I  G    +++  +L+ + C+    D  + +   M   
Sbjct: 391 VLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEAN 450

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ PD++TY++LI G  +   +  ++ L ++M    I P+   + +++  L + GK  +A
Sbjct: 451 GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
              F  +I  +L+     +NIM++G  K   T  A+++++ L + G  P +VT+N L+ G
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C   +L  AR +L  +   G  PNA+TYTT+M         +  LE+LS MK K     
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  VI    K  +L+E+   +E M   G+  D VSYNT+I  +CK   +  A+ L D
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYD 690

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M     E    T+ ILI+G C  G++K A   L  +     + N  AY  I+      G
Sbjct: 691 KMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKG 750

Query: 372 KIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +D A+  F  M V+  F      YS+++  LCK   +  A       L  GV
Sbjct: 751 DVDKAVVYFRQM-VEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGV 802



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 200/407 (49%), Gaps = 8/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CK   ++ A++     ++ G+LPD  +YN+LI   C   S      + N M 
Sbjct: 284 FNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDME 343

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGK 127
             G+ PD+VTYN L  G     L++ + +++ +ML  G  P++ +Y  L+  HC  Q+G 
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHC--QIGN 401

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA +++++MI         +  ++L  LCK+R  D A ++F  ++ +G  P+L+TY+ 
Sbjct: 402 VEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYST 461

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK G ++ A  + +++  +   PN++ +  I+       K          +    
Sbjct: 462 LIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSN 521

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + D   Y  +I  ++K G  +EA    +Q+   G+   IV++N+L+  +C   KL  A 
Sbjct: 522 LSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQAR 581

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LLD ++  G E +  T+T L++  C+ GN++     L  M           Y  ++  L
Sbjct: 582 RLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGL 641

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            K  K+  +  + E M+      D  +Y++++   CKA+ +  A +L
Sbjct: 642 CKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQL 688



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 52/413 (12%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           V ++ML  AY +         +L +M++      + TYNSL+     ++++    D+ +E
Sbjct: 180 VVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIM---WDVYNE 236

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +   G P   ++ + ++  L +  +  +A   FQD    +  P   +FN +++  CK  +
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D A   F  + KHG +P+  +YNILI GLC AG +  A  +  ++ + G  P+ +TY  
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 223 IMKCCFRNRKYKLGL-----EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           + K  FR     LGL      I+  M  KG   +   Y  +I    +IG ++EA    ++
Sbjct: 357 LAK-GFR----LLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE 411

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M++ G QL I+S   L+   CK  +++ A+ L  EME  G   D  T++ LI GLCK G 
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGE 471

Query: 338 IK-----------------------------------GARLHLEYMNKIGFDSNLEAYNC 362
           ++                                    AR++ +Y+       ++  YN 
Sbjct: 472 VQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNI 531

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++D   K G    A+ +++ +  K       T++S+++  C  ++L  A +LL
Sbjct: 532 MIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 155/339 (45%), Gaps = 4/339 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  ++ +A       I   +  D++ YN++ID Y +  +      +  ++ E GISP 
Sbjct: 501 LCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VT+NSL+ G   N  LS +  LLD +   G+ P+  +Y +LM+   + G       +  
Sbjct: 561 IVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T+ +++ GLCK      + ++   +   G  P+ V+YN +I+  CKA 
Sbjct: 621 EMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKAR 680

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            +R A  +  ++      P ++TY  ++   C + + K    L  L +++ +    + + 
Sbjct: 681 DMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL--LVSLQNRKVNLNKYA 738

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I A    G + +A  Y  QMV  G ++ I  Y+ +I   CK   +  A      M 
Sbjct: 739 YTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMML 798

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
             G   D+    +L++   + G++      L  M K G+
Sbjct: 799 SDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 169/407 (41%), Gaps = 39/407 (9%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T ++++D  C+   F                P VV++N++++   +   +  +      M
Sbjct: 248 TSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMM 307

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           L+ G+ PD +SYN L+H L   G   EA  +  DM    L P   T+NI+  G       
Sbjct: 308 LKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI 367

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A  + + +   G  P LVTY +LI G C+ G +  A  + KE+   G   + I+ T +
Sbjct: 368 NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVL 427

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI------------------ 265
           +    ++R+  +  ++   M+  G   D   Y T+I    K                   
Sbjct: 428 LGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRI 487

Query: 266 -----------------GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                            G++ +A  Y + ++T  + LDI+ YN +I+ Y K G    A  
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  ++ ++G      T   L+ G C    +  AR  L+ +   G + N   Y  +++   
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++G +   + +   M+ K       TY+ ++  LCK  +L  + +LL
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLL 654



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 37/271 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC   +L +A  ++ D I+L G+ P+ VTY  L++ YC+  +  +   +L+ M+   I P
Sbjct: 571 FCINRKLSQARRLL-DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGP 629

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             +TY  +I G  +   L  S  LL++M  +G+ PD  SYN+++    +     +A +++
Sbjct: 630 THITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLY 689

Query: 136 QDMICGDLTPCTATFNIMLNGLC---------------KNR--------YT--------- 163
             M+  +L P + T+NI++NG C               +NR        YT         
Sbjct: 690 DKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAK 749

Query: 164 ---DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A+  FR + + GF   +  Y+ +I  LCK   +  A++    +   G  P+   +
Sbjct: 750 GDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLF 809

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
             ++    +        E+L+ M + G+ ++
Sbjct: 810 EVLLNAFHQCGHLNSEFELLAEMIKSGWLYE 840


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 215/451 (47%), Gaps = 6/451 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    ++ R ++A  ++      GV PDV++Y+  I A      ++    +L+ M  
Sbjct: 289 NMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAG 348

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P+ + +NS I    +      +++LL E+  +G+ PD  S+NS +    + G+  E
Sbjct: 349 RGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKE 408

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    L P   ++N  +    K    + AL + R +   G  P +++ NI I+
Sbjct: 409 ALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIR 468

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              + GR +    +L+++   G  PN ITY + +K C +  +++  L++L+ MK    T 
Sbjct: 469 ACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTP 528

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y + IAA  K GR KEA   + +M   G+  D++SY   I+ Y K G+ E A  LL
Sbjct: 529 DSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELL 588

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G   +  T+  +I    + G  + A   L+ + +     +L +YN  +   GK 
Sbjct: 589 RQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKR 648

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS-GVRILKSA 425
           G+ + A+++   M  +    D  +Y+S +   C A+     +  LL+ + + GV    ++
Sbjct: 649 GRWEEALDLLREMPAEGLTPDVISYTSAIR-ACNAEGEWEKALGLLNLMGAHGVSPTATS 707

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
               ++     G R EA  +  ++    +SH
Sbjct: 708 YSLAIEACGKGGRREEAVCLVREMAQRGLSH 738



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 4/379 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P+V  YN  I+A      ++   ++L  M +  + PD ++YNS I    R       
Sbjct: 175 GVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LL EM  +G+ PD  +YNS++    + G+  EA  V  +M    LTP T ++N+ +  
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRA 294

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             ++     A+ + R ++  G  P++++Y+  IK     G+  T+  +L E+   G APN
Sbjct: 295 CGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            I + + +  C +  +++  +E+L  +   G T D   + + IAA  K GR KEA + ++
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLK 414

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M    ++ D +SYN+ I    K G+ E A  L  +M  +G   +  +  I I    + G
Sbjct: 415 EMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERG 474

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
             +     L  M   G   N+  YN  +   GK G+ + A+++   M+      DS TY+
Sbjct: 475 RWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYN 534

Query: 393 SMVHNLCKAKRLPSASKLL 411
           S +    K  R   A  LL
Sbjct: 535 SAIAACSKRGRWKEAVALL 553



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 181/381 (47%), Gaps = 4/381 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  + E+   ++ +   +G+ PD +TYN +I    +   +    ++L  M   G++P+ +
Sbjct: 227 RGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI 286

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           +YN  I    R+     ++++L +M   G+ PDV SY++ +      G+ + +  +  +M
Sbjct: 287 SYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEM 346

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P T  FN  +    K    + A+ + R +   G  P+  ++N  I    K+GR 
Sbjct: 347 AGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRW 406

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  +LKE+      P+AI+Y + ++ C +  ++++ LE+   M  KG T +       
Sbjct: 407 KEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIA 466

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I A  + GR +E  + + QM   G+  ++++YN+ I    K G+ E A  LL +M++   
Sbjct: 467 IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAM 526

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  T+   I    K G  K A   L  M   G   ++ +Y   +D  GK+G+ + A+ 
Sbjct: 527 TPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVE 586

Query: 379 VFESMEVK----DSFTYSSMV 395
           +   M  K    +  TY+S++
Sbjct: 587 LLRQMPTKGLTPNVITYNSVI 607



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 172/361 (47%), Gaps = 2/361 (0%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I  CT  K+ R ++A  ++ +     + PD ++YN  I+A  +   ++    +  +M   
Sbjct: 397 IAACT--KSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTK 454

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G++P+V++ N  I            L+LL +M   G+ P+V +YNS +    + G+ ++A
Sbjct: 455 GLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKA 514

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +   M    +TP + T+N  +    K      A+ + R +   G  P++++Y   I  
Sbjct: 515 LDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDA 574

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
             K G+   A  +L+++   G  PN ITY +++K C R  +++  L++L  +K      D
Sbjct: 575 YGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPD 634

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y   I+A  K GR +EA D + +M  +G+  D++SY + I     EG+ E A  LL+
Sbjct: 635 LMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLN 694

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M   G      ++++ I+   K G  + A   +  M + G      + + IV+ LG D 
Sbjct: 695 LMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGDDA 754

Query: 372 K 372
           K
Sbjct: 755 K 755



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 107/215 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  R ++A A++ +    G+ PDV++Y   IDAY +   ++    +L +M  
Sbjct: 534 NSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPT 593

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P+V+TYNS+I    R      +LDLL E+ E  + PD+ SYN  +    + G+ +E
Sbjct: 594 KGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEE 653

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    LTP   ++   +         + AL +   +  HG  P   +Y++ I+
Sbjct: 654 ALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIE 713

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
              K GR   A  +++E+   G +   I+ + I++
Sbjct: 714 ACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVE 748



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 36/284 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + T  K  + EKA  ++     L + PD +TYN  I A  +   +     +L  M  
Sbjct: 499 NSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPG 558

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PDV++Y + I    +N     +++LL +M   G+ P+V +YNS++           
Sbjct: 559 QGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKA--------- 609

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
                    CG                 +    + AL + + L++    P+L++YN+ I 
Sbjct: 610 ---------CG-----------------RGGEWEKALDLLKELKETAVAPDLMSYNLAIS 643

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K GR   A  +L+E+   G  P+ I+YT+ ++ C    +++  L +L+ M   G + 
Sbjct: 644 ACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSP 703

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
               Y   I A  K GR +EA   + +M   G+    +S N+LI
Sbjct: 704 TATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNIS-NSLI 746


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 204/436 (46%), Gaps = 4/436 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+ TYN +++A C+  + D    IL +M +
Sbjct: 220 NTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVD 279

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD  TYNSLI G +       ++ +  +M   GI PDV + NSLM  L + GK  +
Sbjct: 280 KGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKD 339

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M          ++ IMLNG        +   +F  +   G  P+   +N+LIK
Sbjct: 340 ARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K G L  A  I  E+ + G  P+ +TY+T++    R  K    +E  + M  +G   
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAP 459

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  +I  F   G L +A D + QM+  G++ DI  +N +IN  CK G++  A  + 
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D     G   +   +  L+DG C  G ++ A    + M   G   N+  Y  +V+   K 
Sbjct: 520 DFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKV 579

Query: 371 GKIDHAINVFESM---EVKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+ID  +++F  +    +K S T Y+ ++H L +A R   A        +SG+ + +   
Sbjct: 580 GRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTY 639

Query: 427 KAVVDGLRHSGCRREA 442
             V+ GL  + C  EA
Sbjct: 640 SIVLGGLFKNSCSDEA 655



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 202/425 (47%), Gaps = 9/425 (2%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFV-SFDAGYTILNRMREAGI 73
           CT  +A+R +   A     ++ G+  D +  + L+   C+   + +A   +L+RM   G 
Sbjct: 118 CT--RAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGC 175

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP--PDVWSYNSLMHCLFQLGKPDEA 131
            PDV +Y  ++     +     + +LL  M E G    P+  +YN+++   F+ G  ++A
Sbjct: 176 VPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKA 235

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F +M+   ++P  +T+N ++N LCK R  D A  + R +   G +P+  TYN LI G
Sbjct: 236 CDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYG 295

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + K++   G  P+ +T  ++M    ++ K K   ++  +M  KG   D
Sbjct: 296 YSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + T+    M++DG+  D   +N LI  Y K G L+ A ++ +
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM +QG E D  T++ +I  LC+ G +  A      M   G   ++  Y+ ++      G
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            +  A ++   M  K    D   ++ +++NLCK  R+  A  +    +  G+        
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535

Query: 428 AVVDG 432
            ++DG
Sbjct: 536 TLMDG 540



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 1/362 (0%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           + + N+ +  + K   L++A  I  +    GV PDVVTY+ +I A C+    D      N
Sbjct: 391 SHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFN 450

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M + G++P + TY+ LI G   +  L  + DL+ +M+  G+ PD+  +N +++ L +LG
Sbjct: 451 QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLG 510

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  +F   I   L P    +N +++G C     +NALR+F  +   G  P +V Y 
Sbjct: 511 RVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYG 570

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G CK GR+     + +E+   G  P+   Y  I+   F+  +          M   
Sbjct: 571 TLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTES 630

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D + Y  V+    K     EA    +++    V++DI + N +I    +  ++E A
Sbjct: 631 GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEA 690

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS-NLEAYNCIVD 365
             L   + + G      T++I++  L K G ++ A      M   G +  N +  N +V 
Sbjct: 691 KDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVR 750

Query: 366 RL 367
            L
Sbjct: 751 EL 752



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 164/348 (47%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD   +N+LI AY +    D    I N MRE G+ PDVVTY+++IA   R   +  +
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDA 445

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++  ++M++ G+ P + +Y+ L+      G   +A  +   M+   + P    FN ++N 
Sbjct: 446 VEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN 505

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK     +A  +F      G  P ++ YN L+ G C  G++  A  +   +  +G  PN
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + Y T++    +  +   GL +   +  KG       Y  ++    + GR   A     
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFH 625

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+ +D  +Y+ ++    K    + A LL  E+     + D  T  I+I G+ +  
Sbjct: 626 EMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIR 685

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            ++ A+     +++ G   ++  Y+ ++  L K+G ++ A ++F SME
Sbjct: 686 RVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 8/311 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   CK  R+  A+ I    I +G+ P+V+ YN L+D YC     +    + + M 
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            AGI P+VV Y +L+ G  +   +   L L  E+L  GI P    YN ++H LFQ G+  
Sbjct: 559 SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTV 618

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A   F +M    +     T++I+L GL KN  +D A+ +F+ L       ++ T NI+I
Sbjct: 619 PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+ +  R+  A+ +   +  SG  P+ +TY+ +M    +    +   ++ S+M+  G  
Sbjct: 679 AGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCE 738

Query: 250 FDGFGYCT-VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK------ 302
                    V+   ++   +  A  Y+ ++      LD  +   LI+L+  +G       
Sbjct: 739 QPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCREHIR 798

Query: 303 -LEAAYLLLDE 312
            L A Y  L E
Sbjct: 799 FLPAKYHFLAE 809



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 175/393 (44%), Gaps = 11/393 (2%)

Query: 64  ILNRMREAG----ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           + NR+  A     +SP + TY  L+   TR      +L    ++L+ G+  D    ++L+
Sbjct: 91  LFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLL 150

Query: 120 HCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
             L +  +  EA + +   M      P   ++ I+L  LC +R +  A  + R + + G 
Sbjct: 151 RGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGA 210

Query: 179 V--PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           V  P  V YN +I G  K G +  A  +  E+   G +P+  TY  ++    + R     
Sbjct: 211 VCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKA 270

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             IL  M  KG   D + Y ++I  +   G+ KEA    ++M + G+  D+V+ N+L+  
Sbjct: 271 EAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMAS 330

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CK GK++ A  + D M  +G + D +++ I+++G    G +         M   G   +
Sbjct: 331 LCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPD 390

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
              +N ++    K G +D A  +F  M  +    D  TYS+++  LC+  ++  A +   
Sbjct: 391 SHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFN 450

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +  GV    S    ++ G    G   +AK +
Sbjct: 451 QMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 38/241 (15%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P   TY  +M CC R  + KL L     + + G   D      ++    +  R  EA D
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164

Query: 274 -YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             + +M   G   D+ SY  ++   C + K   A  LL  M + G  C            
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLP---------- 214

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
                                  N  AYN ++D   K+G ++ A ++F  M  +    D 
Sbjct: 215 -----------------------NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDL 251

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            TY+ +V+ LCKA+ +  A  +L   +  GV        +++ G   +G  +EA ++  K
Sbjct: 252 STYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKK 311

Query: 449 I 449
           +
Sbjct: 312 M 312



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 6/197 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST L NI +    +A R   A+    +    G+  D  TY++++    +    D    
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +    +  D+ T N +IAG  +   +  + DL   +   G+ P V +Y+ +M  L 
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717

Query: 124 QLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           + G  +EA+ +F  M   G   P +   N ++  L + R    A      + +  F  + 
Sbjct: 718 KEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDH 777

Query: 183 VTYNILI-----KGLCK 194
            T  +LI     KG C+
Sbjct: 778 STTTLLIDLFSSKGTCR 794


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 202/413 (48%), Gaps = 4/413 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  ++ +    G+ PDV TY++LI  +C+    + G  ++  M+ 
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           + + P +V+Y+SL  G  +  L   SLD+  ++   G   D  +Y+ L+      G  D 
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+++ ++M+  +L P  + F  +++G CK     NAL  F  + + G +P + T N++I 
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C+ GR+  A  ++ E+   G  PN  TY  ++    + RK +  LE+   M ++    
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y T+I  F K    ++A     +M+  GV  D+V+Y  LIN+ C   ++  AY L 
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M + G   DK ++T +I G C+ G+++ A      M + G    +  Y  +VD   K 
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKM 688

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +ID A  + + M+ K    D  TY+ ++    +   L  A ++L    ++GV
Sbjct: 689 NRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGV 741



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 217/475 (45%), Gaps = 47/475 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--FVSFD-- 59
           +LSTR  N  +    +ANR E   ++  +    G  P+V TY ++++ YC+  F   D  
Sbjct: 211 ELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADID 270

Query: 60  --AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD------------------- 98
                 IL  M   G SP VVTY++ I G  R   +  +LD                   
Sbjct: 271 TRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNA 330

Query: 99  ----------------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
                           +L+EM   GI PDV++Y+ L+H   + G  ++   + ++M   +
Sbjct: 331 IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSN 390

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P   +++ + +GLCK R +D +L +FR L   G+  +   Y+ILIKG C  G L +A 
Sbjct: 391 MEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAH 450

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA-A 261
            +++E+  +  AP+   + +++    +   +   LE  + M   G        C VI  A
Sbjct: 451 KLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGG-ILPSIATCNVIIDA 509

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             + GR++EA + M +M T G+  ++ +YN +IN  CKE K E A  L   M K+     
Sbjct: 510 HCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPS 569

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
              ++ LIDG  K  N + A +    M KIG   ++ AY  +++ L    ++  A N+F+
Sbjct: 570 VVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFK 629

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            M       D  +Y+S++   C+   +  A  L    L+ G         ++VDG
Sbjct: 630 KMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDG 684



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 173/332 (52%), Gaps = 1/332 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC    L+ A  ++ + +R  + PD   +  L+  +C+   +       N M E
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P + T N +I    R   +  +L+L++EM   GI P++++YN++++ L +  K + 
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M+  ++ P    ++ +++G  K   +  AL ++  + K G  P++V Y ILI 
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC   R+  A  + K++ ++G  P+ I+YT+++    R    +    + + M ++G+  
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y +++  + K+ R+  A   +++M   G+  D+V+YN LI  + + G L+ A  +L
Sbjct: 674 TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +EM++ G   D  T+ ++++ L KA  +K  R
Sbjct: 734 NEMKENGVLPDHMTY-MMLEWLLKAKKLKTRR 764



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 37/396 (9%)

Query: 69  REAGISPDVV-TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           R+  +SP VV  + SL     R+   S +      M + G    + ++ ++++ L   G 
Sbjct: 86  RKHVLSPVVVKVFKSLNWEVARHIKFSTT------MKKYGFSRSIDAFRTVVNVLALAGM 139

Query: 128 PDEANRVFQDMIC--------------------GDLTPCTATFNIMLNGLCKNRYTDNAL 167
             E   + +D++C                     D       F++++     N   +NA+
Sbjct: 140 HMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAV 199

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            +F   +K G      + N L+K L +A R    R + +E+  +G  PN  TYT +M   
Sbjct: 200 DVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFY 259

Query: 228 FRNR------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +          +   EIL  M+R G +     Y T I    ++G ++ A D++  +++ 
Sbjct: 260 CKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISA 319

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
              +++  YN +I+  CK+G+L+ A  +L+EM+  G   D YT++ILI G CK G+++  
Sbjct: 320 NGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              +E M     + +L +Y+ +   L K    D ++++F  +       D   YS ++  
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG 439

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            C    L SA KL+   +++ +    S  +++V G 
Sbjct: 440 FCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 25/198 (12%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  F     L+ A D   Q    G++L   S N L+    +  + E    L +EM+  G
Sbjct: 185 LIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTG 244

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              + +T+TI+++  CK GN   A            D +      I++ + ++G      
Sbjct: 245 PPPNVFTYTIMMNFYCK-GNFGEA------------DIDTRQATEILEEMERNG------ 285

Query: 378 NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                 E     TYS+ ++ LC+   + SA   + S + +   +      A++ GL   G
Sbjct: 286 ------ESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339

Query: 438 CRREAKKIQSKIRMAKIS 455
              EA K+  +++   IS
Sbjct: 340 ELDEALKVLEEMKSCGIS 357


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 207/464 (44%), Gaps = 38/464 (8%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C  + ++ A +++ D  + G +P+ V Y  LI A C+         +L  M      P
Sbjct: 214 ALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEP 273

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA---- 131
           DV T+N +I G  R   +  +  LLD ML  G   D  +Y  LMH L ++G+ DEA    
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333

Query: 132 ----------------------------NRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
                                       + ++ +M+     P   TFNIM++GL K  Y 
Sbjct: 334 NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
            +AL +   +    F P ++TY ILI G CK GRL  A  I+  +   G + N + Y  +
Sbjct: 394 VSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCL 453

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++   +  L++   M  KG   D + + ++I    K  +++EA      M  +GV
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGAR 342
             + V+YNTL++ +     ++ A+ L+DEM  +G   D  T+  LI  LCK G + KG  
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 398
           L  E + K G    + + N ++  L + GK++ A+   + M       D  TY+S+++ L
Sbjct: 574 LFEEMLGK-GIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           CK   +  AS L       G+R        ++    H G   +A
Sbjct: 633 CKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 192/399 (48%), Gaps = 11/399 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGISP 75
            C+  ++++A A++         P+ V YN LI  Y     F+    +L N M  AG  P
Sbjct: 320 LCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D  T+N +I G  +   L  +L+LL+EM+     P+V +Y  L++   + G+ +EA  + 
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M    L+  T  +N ++  LCK+   + AL++F  +   G  P++ T+N LI GLCK 
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKN 495

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            ++  A  +  ++   G   N +TY T++         +   +++  M  +G   D   Y
Sbjct: 496 HKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITY 555

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I A  K G +++     E+M+  G+   I+S N LI+  C+ GK+  A   L +M  
Sbjct: 556 NGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIH 615

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D  T+  LI+GLCK G+++ A      +   G   +   YN ++ R   +G  + 
Sbjct: 616 RGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFND 675

Query: 376 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
           A  +     +S  + +  T+S +++ +   K++P  ++ 
Sbjct: 676 ACLLLYKGVDSGFIPNEVTWSILINYI--VKKIPWGARF 712



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 201/400 (50%), Gaps = 13/400 (3%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           V  ++L+D  C  V+ +  Y +L+R    G+SP V T+  ++      S +  +  LL +
Sbjct: 175 VVLDILVDGDCPRVAPNVFYDMLSR----GVSPTVYTFGVVMKALCMVSEVDSACSLLRD 230

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M + G  P+   Y +L+H L +  +  EA ++ +DM      P   TFN +++GLC+   
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
              A ++   +   GF  + +TY  L+ GLC+ G++  AR +L ++ +    PN + Y T
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNT 346

Query: 223 IMKCCFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           ++     + +++   ++L + M   GY  D + +  +I   VK G L  A + + +MV  
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
             + ++++Y  LIN +CK+G+LE A  +++ M  +G   +   +  LI  LCK GNI+ A
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
                 M+  G   ++  +N +++ L K+ K++ A++++  M     + ++ TY+++VH 
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                 +  A KL+   L  G  +       ++  L  +G
Sbjct: 527 FLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 175/379 (46%), Gaps = 42/379 (11%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   SYN ++  L     P  A  VF DM+   ++P   TF +++  LC     D+A  +
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            R + KHG VP  V Y  LI  LC+  R+  A  +L+++      P+  T+  ++    R
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 230 NRKYKLGLEILSAMKRKGYTFDG--FGYC-----------------------------TV 258
             +     ++L  M  +G++ D   +GY                              T+
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTL 347

Query: 259 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           I+ +V  GR +EA D +   MV  G + D  ++N +I+   K+G L +A  LL+EM  + 
Sbjct: 348 ISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR 407

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           FE +  T+TILI+G CK G ++ A   +  M+  G   N   YNC++  L KDG I+ A+
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +F  M  K    D +T++S+++ LCK  ++  A  L       GV     A     + L
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV----IANTVTYNTL 523

Query: 434 RHSGCRREAKKIQSKIRMA 452
            H+   R++  IQ   ++ 
Sbjct: 524 VHAFLMRDS--IQQAFKLV 540



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 118/220 (53%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  +C  CK   +E+A  +  +    G  PD+ T+N LI+  C+    +   ++
Sbjct: 445 LNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSL 504

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M   G+  + VTYN+L+        +  +  L+DEML  G P D  +YN L+  L +
Sbjct: 505 YHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCK 564

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  ++   +F++M+   + P   + NI+++GLC+    ++AL+  + +   G  P++VT
Sbjct: 565 TGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVT 624

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           YN LI GLCK G ++ A  +  +L   G  P+AITY T++
Sbjct: 625 YNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 45/336 (13%)

Query: 126 GKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           G P +A R+  DM       P   ++N++L+ L        A  +F  +   G  P + T
Sbjct: 148 GLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYT 207

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           + +++K LC    + +A  +L+++   G  PN++ Y T+                     
Sbjct: 208 FGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL--------------------- 246

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                         I A  +  R+ EA   +E M     + D+ ++N +I+  C+ G++ 
Sbjct: 247 --------------IHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH 292

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  LLD M  +GF  D  T+  L+ GLC+ G +  AR     +NKI  + N   YN ++
Sbjct: 293 EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEAR---ALLNKIP-NPNTVLYNTLI 348

Query: 365 DRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
                 G+ + A ++  +  V      D++T++ M+  L K   L SA +LL   +    
Sbjct: 349 SGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRF 408

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                    +++G    G   EA +I + +    +S
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLS 444



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 103/190 (54%), Gaps = 2/190 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V  F   + +++A  ++ + +  G   D +TYN LI A C+  + + G  + 
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLF 575

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   GI P +++ N LI+G  R   ++ +L  L +M+  G+ PD+ +YNSL++ L ++
Sbjct: 576 EEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKM 635

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTDNALRMFRGLQKHGFVPELVT 184
           G   EA+ +F  +    + P   T+N +++  C +  + D  L +++G+   GF+P  VT
Sbjct: 636 GHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDS-GFIPNEVT 694

Query: 185 YNILIKGLCK 194
           ++ILI  + K
Sbjct: 695 WSILINYIVK 704


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 203/414 (49%), Gaps = 10/414 (2%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++IA
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 86  GATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDL 143
           G      +  +LD++ EM E G I P+ ++Y +++    ++G+ DEA +VF +M+  G++
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P    +N ++ G C     D AL     + + G    + TYN+L+  L   GR   A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +++E+G  G AP+  TY  ++    +    K  LEI   M R+G       Y  +I A  
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K G+++E     ++ V  G++ D+V YN LIN +   G ++ A+ ++ EMEK+    D  
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  L+ GLC  G +  AR  ++ M + G   +L  YN ++      G +  A+ +   M
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             K       TY++++  LCK  +   A  ++   +++G+    S   ++++GL
Sbjct: 454 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 174/359 (48%), Gaps = 2/359 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  FC   R++ A  I+ +   R G+ P+  TY  +I  +C+    D    + + M 
Sbjct: 149 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 208

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + P+ V YN+LI G      L  +L   D M+E G+   V +YN L+H LF  G+ 
Sbjct: 209 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 268

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  + ++M    L P   T+NI++NG CK      AL +F  + + G    +VTY  L
Sbjct: 269 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 328

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K G+++    +  E    G  P+ + Y  ++     +       EI+  M++K  
Sbjct: 329 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 388

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T++     +GR+ EA   +++M   G+Q D+V+YNTLI+ Y  +G ++ A  
Sbjct: 389 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 448

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           + +EM  +GF     T+  LI GLCK G    A   ++ M + G   +   Y  +++ L
Sbjct: 449 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + SL L   M  + +P    S + L+  L        A  +F DM    L  CT TFNIM
Sbjct: 65  ATSLRLYSRMKSLSLPISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIM 120

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  LC       AL + R + +    P  VTYN +I G C  GR++ A  I++E+ + G 
Sbjct: 121 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 176

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 271
            APN  TY T++    +  +    +++   M  KG    +   Y  +I  +   G+L  A
Sbjct: 177 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 236

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             Y ++MV  GV + + +YN L++    +G+   AY L++EM  +G   D +T+ ILI+G
Sbjct: 237 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 296

Query: 332 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 356
            CK GN+K A    E M++ G                           FD         +
Sbjct: 297 HCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPD 356

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           L  YN +++     G ID A  +   ME K    D  TY++++  LC   R+  A KL+ 
Sbjct: 357 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 416

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              + G++        ++ G    G  ++A +I++++
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 164/330 (49%), Gaps = 16/330 (4%)

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R++  M    L   TA+ + +L+ L     +  A  +F  + +        T+NI+++ L
Sbjct: 69  RLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHL 124

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK-RKGYTF 250
           C AG+   A  +L+++      PNA+TY T++   C R R  +  L+I+  M+ R G   
Sbjct: 125 CSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAP 179

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLL 309
           + + Y TVI+ + K+GR+ EA    ++M+T G V+ + V YN LI  YC +GKL+ A L 
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 239

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D M ++G      T+ +L+  L   G    A   +E M   G   ++  YN +++   K
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 299

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G +  A+ +FE+M  +       TY+++++ L K  ++    KL    ++ G+R     
Sbjct: 300 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 359

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             A+++    SG    A +I  ++   +I+
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIA 389



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 83/150 (55%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  + +   +  +++A  I+ +  +  + PD VTYN L+   C     D    +++ M
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E GI PD+VTYN+LI+G +    +  +L + +EM+  G  P + +YN+L+  L + G+ 
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 478

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           D+A  + ++M+   +TP  +T+  ++ GL 
Sbjct: 479 DDAENMVKEMVENGITPDDSTYISLIEGLT 508


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 221/481 (45%), Gaps = 31/481 (6%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +S +  NI +    +  +  +AE ++   I  G+ P + +YN+L+D  C+        TI
Sbjct: 324 VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M+  G+SPD VTY  L+ G      +  +  LL EM+     P+ ++ N L+H L+ 
Sbjct: 384 VGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWN 443

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------ 178
           +G+  EA  + + M        T T NI+++GLC +   D A+ + +G++ HG       
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503

Query: 179 -----------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
                            +P+L+TY+ L+ GLCKAGR   A+ +  E+      P+++ Y 
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYN 563

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
             +    +  K      +L  M++KG       Y ++I       ++ E    M++M   
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK 623

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  +I +YNT I   C+ GK+E A  LLDEM ++    + ++   LI   CK  +   A
Sbjct: 624 GISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMA 683

Query: 342 RLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           +   E    I G    L  Y+ + + L   G++  A  + E++  +     +F Y  +V 
Sbjct: 684 QEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVV 741

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKIS 455
           +LCK   L  AS +L   +  G     +A   V+DGL   G ++EA     K + MA + 
Sbjct: 742 SLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVG 801

Query: 456 H 456
            
Sbjct: 802 E 802



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 216/476 (45%), Gaps = 37/476 (7%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N+ + +  +  R+E    +  D +  G+ P+  T+N+LI A C     DA   + + M
Sbjct: 114 LYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEM 173

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G  P+  T+  L+ G  +  L    L+LL+ M   G+ P+   YN+++    + G+ 
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRN 233

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----PELVT 184
           D++ ++ + M    L P   TFN  ++ LCK     +A R+F  ++   ++    P  +T
Sbjct: 234 DDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN+++KG CK G L  A+ + + + ++    +  +Y   ++   R+ K+     +L  M 
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMI 353

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG     + Y  ++    K+G L +A   +  M  +GV  D V+Y  L++ YC  GK++
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVD 413

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           AA  LL EM +     + YT  IL+  L   G I  A   L  MN+ G+  +    N IV
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473

Query: 365 DRLGKDGKIDHAINVFESMEV---------------------------KDSFTYSSMVHN 397
           D L   G++D AI + + M V                            D  TYS++++ 
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           LCKA R   A  L    +   ++    A    +    H  C++   KI S  R+ K
Sbjct: 534 LCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI----HHFCKQ--GKISSAFRVLK 583



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 214/443 (48%), Gaps = 31/443 (6%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N+ +   C ++ ++ A  +  +    G  P+  T+ +L+  YC+    D G  +LN
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G+ P+ V YN++++   R      S  L+++M E G+ PD+ ++NS +  L + G
Sbjct: 207 SMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEG 266

Query: 127 KPDEANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           K  +A+R+F DM      G   P + T+N+ML G CK    ++A  +F  ++++  +  L
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSL 326

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +YNI ++GL + G+   A  +LK++ D G  P+  +Y  +M    +         I+  
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MKR G + D   Y  ++  +  +G++  A   +++M+ +    +  + N L++     G+
Sbjct: 387 MKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGR 446

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-------IKGARLH-LEYMNKIG-- 352
           +  A  LL +M ++G+  D  T  I++DGLC +G        +KG R+H    +  +G  
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506

Query: 353 ----FDSNLEAYNCIVD---------RLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
                D +L   NC+ D          L K G+   A  +F  M  +    DS  Y+  +
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566

Query: 396 HNLCKAKRLPSASKLLLSCLKSG 418
           H+ CK  ++ SA ++L    K G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKG 589



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 8/393 (2%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           R R     P +  YN L+    R   +     L  +M+  GI P+ +++N L+  L    
Sbjct: 102 RSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSS 161

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             D A  +F +M      P   TF I++ G CK   TD  L +   ++  G +P  V YN
Sbjct: 162 CVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYN 221

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++   C+ GR   +  +++++ + G  P+ +T+ + +    +  K      I S M+  
Sbjct: 222 TIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281

Query: 247 GY----TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            Y      +   Y  ++  F K+G L++A    E +  +   + + SYN  +    + GK
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGK 341

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
              A  +L +M  +G     Y++ IL+DGLCK G +  A+  +  M + G   +   Y C
Sbjct: 342 FIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGC 401

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++      GK+D A ++ + M     + +++T + ++H+L    R+  A +LL    + G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKG 461

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             +       +VDGL  SG   +A +I   +R+
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 202/382 (52%), Gaps = 4/382 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + KA   E+A  +  + +  GV  ++ TYN+++   C+    D   ++L+ M   G+ P+
Sbjct: 445 YLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 503

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN +I G  R   +  +  +  +ML   + P+V +Y+ L+   F+ G  ++A  +F 
Sbjct: 504 VVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 563

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  ++ P   TFN ++NGLCK      A    +   + GF+P  +TYN ++ G  K G
Sbjct: 564 QMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 623

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            + +A  + +E+ + G +PN +TYT+++    ++ +  L L+    M+ KG   D   Y 
Sbjct: 624 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 683

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F K   ++ A D   +++  G+  + + YN++I+ +     +EAA +   +M   
Sbjct: 684 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 743

Query: 317 GFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
              CD  T+T LIDGL K G  +  + L++E ++K G   ++  ++ +V+ L   G++++
Sbjct: 744 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK-GIVPDIITFHVLVNGLCNKGQLEN 802

Query: 376 AINVFESMEVKDSFTYSSMVHN 397
           A  + E M+ K+  T S +++N
Sbjct: 803 ARKILEEMDRKN-MTPSVLIYN 823



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 206/397 (51%), Gaps = 4/397 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  ++++A +++ + +  G++P+VV+YN +I  +C+  + D   ++ + M  
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 532

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+VVTY+ LI G  +      +LDL D+ML + I P  +++N++++ L ++G+  E
Sbjct: 533 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 592

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    ++ +     P   T+N +++G  K    D+AL ++R + + G  P +VTY  LI 
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 652

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK+ R+  A     E+ + G   +   Y+ ++    + R  +   ++   +   G + 
Sbjct: 653 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 712

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I+ F  +  ++ A  + ++M+ D +  D+ +Y TLI+   KEG+L  A  L 
Sbjct: 713 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   D  T  +L++GLC  G ++ AR  LE M++     ++  YN ++    ++
Sbjct: 773 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 832

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 403
           G +  A  + + M     V D  TY  +++   K  R
Sbjct: 833 GNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 197/400 (49%), Gaps = 9/400 (2%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C +  +EKA  +       G+ P V   N L+  Y +   ++    + +   + G++ ++
Sbjct: 411 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NI 469

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVF 135
            TYN +++   +   +  +  LLD M+  G+ P+V SYN ++  HC  + G  D A+ VF
Sbjct: 470 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHC--RKGNMDMASSVF 527

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            DM+  DL P   T++I+++G  K   ++ AL +F  +      P   T+N +I GLCK 
Sbjct: 528 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 587

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  AR  LK   + G  P+ +TY +I+    +       L +   M   G + +   Y
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F K  R+  A    ++M   G++LD+ +Y+ LI+ +CK   +E+A  L  E+ +
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   ++  +  +I G     N++ A +  + M       +L  Y  ++D L K+G++  
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 767

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           A +++  M     V D  T+  +V+ LC   +L +A K+L
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 195/426 (45%), Gaps = 9/426 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+E+AE    +    GV  D   Y+++I A C+  + + G  +L  M+E G  P   
Sbjct: 272 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T+ S+I        +  +L L +EM+  G P ++    SLM      G  D A  +F  +
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   T+++++ G C +   + A  ++  ++ +G  P +   N L++G  KA   
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E  D G A N  TY  +M    +  K      +L  M  +G   +   Y  +
Sbjct: 452 EEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    + G +  A+     M+   ++ ++V+Y+ LI+   K+G  E A  L D+M     
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T   +I+GLCK G +  AR  L+   + GF  +   YN IVD   K+G ID A+ 
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           V+  M       +  TY+S+++  CK+ R+  A K      + G+ +  +A  A++DG  
Sbjct: 631 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF- 689

Query: 435 HSGCRR 440
              C+R
Sbjct: 690 ---CKR 692



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 49/421 (11%)

Query: 26  AEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           A+  +++ +RL       G   ++V    L+  YC   + D+   + N++ E G+ P+ V
Sbjct: 342 AQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKV 401

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ LI G   +  +  + +L  +M   GIPP V++ NSL+    +    +EA+++F + 
Sbjct: 402 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 461

Query: 139 I-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           + CG       T+NIM++ LCK    D A  +   +   G VP +V+YN +I G C+ G 
Sbjct: 462 VDCG--VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 519

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +  ++      PN +TY+ ++   F                             
Sbjct: 520 MDMASSVFSDMLARDLKPNVVTYSILIDGNF----------------------------- 550

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
                 K G  ++A D  +QM++  +     ++NT+IN  CK G++  A   L    ++G
Sbjct: 551 ------KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F     T+  ++DG  K GNI  A      M + G   N+  Y  +++   K  +ID A+
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
              + M  K    D   YS+++   CK + + SA  L    L+ G+   +    +++ G 
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724

Query: 434 R 434
           R
Sbjct: 725 R 725



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 195/438 (44%), Gaps = 5/438 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L  R+ N  +  + +ANR+E A       I   V+P V   N+L+ A  +         
Sbjct: 187 ELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRD 246

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + N+M   GI  D  T + ++    +   +  + +   E  E G+  D  +Y+ ++  + 
Sbjct: 247 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 306

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    +    + ++M      P  ATF  ++           ALR+   +   G    LV
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
               L+KG C  G L +A  +  ++ + G  PN +TY+ +++ C  +   +   E+ + M
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  G     F   +++  ++K    +EA+   ++ V  GV  +I +YN +++  CK GK+
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 485

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LLD M  QG   +  ++  +I G C+ GN+  A      M       N+  Y+ +
Sbjct: 486 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 545

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K G  + A+++F+ M         FT++++++ LCK  ++  A   L + L+ G 
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 605

Query: 420 RILKSAQKAVVDGLRHSG 437
                   ++VDG    G
Sbjct: 606 IPSCMTYNSIVDGFIKEG 623



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/336 (20%), Positives = 128/336 (38%), Gaps = 73/336 (21%)

Query: 126 GKPDEANRVFQDMICG-----DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           G  D +  VF D +       D       FN +LN   +    +NA+  F  +     +P
Sbjct: 164 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 223

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +   NIL+  L +       R ++ EL D                            + 
Sbjct: 224 WVPYMNILLTALVR-------RNMIGELRD----------------------------LY 248

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +G   D F    ++ A +K GR++EA +Y  +    GV+LD  +Y+ +I   CK+
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEA 359
                   LL+EM+++G+   + T T +I      GN ++  RL  E +N  G   NL  
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN-CGKPMNLVV 367

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              ++      G +D A+N+F  +                                + G+
Sbjct: 368 ATSLMKGYCAQGNLDSALNLFNKIT-------------------------------EDGL 396

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              K     +++G  +SG   +A ++ +++++  I 
Sbjct: 397 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 198/412 (48%), Gaps = 7/412 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL T+L N  +  + +AN +EKA   +    + G  P   TY+ +I  + +      G  
Sbjct: 27  KLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLL 86

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M +A   PD  T+N LI    +   +  + ++  +M ++ + PDV++Y  L+  L 
Sbjct: 87  MYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLG 146

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            +G+ D   ++F+ M      P   T++ +++        D A  +F+ + + G  P+ V
Sbjct: 147 TIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAV 206

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYNILI    K G+L  A      +G S    N +TY +++    R    +  +E+   M
Sbjct: 207 TYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQM 263

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K KG   +   Y  +I      GR+++      +MV + ++ DIV+ N +++   K G++
Sbjct: 264 KAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRV 323

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           EAA+ L  +M+ +G   D  T+ ILI+GL +AG +  A   L  M + G   N+  YN +
Sbjct: 324 EAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTL 383

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +   GK   +  A  +F  M+ +    +  +YSS++    KA R  +A  L 
Sbjct: 384 ISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLF 435



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 3/313 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F  A R+++A  I    ++ G+ PD VTYN+LIDA+ +    +  +  + + R      +
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSF---TN 236

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYNSL++   R   +   ++L  +M   G+  +  +Y  L+  L   G+ ++  +++ 
Sbjct: 237 EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYL 296

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D+     T N +L+ L K    + A  +F+ ++  G   + VTYNILI GL +AG
Sbjct: 297 EMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +L E+ ++G APN ITY T++    +         +   MK +G   +   Y 
Sbjct: 357 KLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYS 416

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I  F K GR   A     +M  +G   + V+YN LI+   + G+  AA   L EM   
Sbjct: 417 SLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDA 476

Query: 317 GFECDKYTHTILI 329
           G +  K T ++L+
Sbjct: 477 GCQMGKVTKSLLV 489



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 182/367 (49%), Gaps = 11/367 (2%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           +D    ++  M++     D   +N+LI      +++  +L  L    + G  P  ++Y+S
Sbjct: 11  YDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSS 70

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           ++    + G       +++ M+     P   TFNI+++ L K    + A  +F  + K  
Sbjct: 71  MIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLN 130

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P++ TY ILI+ L   GR+     + + +   G  PN  TY ++M       +     
Sbjct: 131 VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEAC 190

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +I   M +KG   D   Y  +I AF K G+L+ A D++ +  +     + V+YN+L++  
Sbjct: 191 DIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FTNEVTYNSLLSSL 247

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYM-NKIGFDS 355
            ++G ++    L  +M+ +G   ++ T+ ILI+ L  AG ++   +L+LE + N I +D 
Sbjct: 248 GRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYD- 306

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            +   N ++D L K G+++ A  +F+ M+ K    D+ TY+ +++ L +A +L +A  LL
Sbjct: 307 -IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL 365

Query: 412 LSCLKSG 418
           L   ++G
Sbjct: 366 LEMEENG 372



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 106/206 (51%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           A R+E    + ++ +   +  D+VT N ++D   +    +A + +   M+  G++ D VT
Sbjct: 285 AGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVT 344

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           YN LI G  R   L  +  LL EM E G  P++ +YN+L+    +      A R+F +M 
Sbjct: 345 YNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMK 404

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P   +++ ++ G  K   TD A+ +FR ++  G  P  VTYN+LI  L +AGR  
Sbjct: 405 ERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFG 464

Query: 200 TARWILKELGDSGHAPNAITYTTIMK 225
            A   L+E+ D+G     +T + +++
Sbjct: 465 AAMEYLREMRDAGCQMGKVTKSLLVR 490



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 1/249 (0%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ML  L   R  D+  R+   +QK     +   +N LI    +A  +  A   L      G
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P A TY+++++   +    + GL +   M +  +  D   +  +I +  K  +++EA 
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +    M    V  D+ +Y  LI      G+++A   L + M  QG + + +T+  ++   
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-VFESMEVKDSFTY 391
             AG +  A    + M + G   +   YN ++D  GK G+++ A + V +S    +  TY
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTY 240

Query: 392 SSMVHNLCK 400
           +S++ +L +
Sbjct: 241 NSLLSSLGR 249


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 189/399 (47%), Gaps = 4/399 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++   L I V   C+   +EK++ +I +    G+ P+  TYN +I+AY +   F     
Sbjct: 202 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEK 261

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           IL  M++ G+  + VTY  LI  + +N  ++    L DEM E GI  D+  Y SL+    
Sbjct: 262 ILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNC 321

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G    A  +F ++    L P + T+  +++G+CK      A  +   +Q  G     V
Sbjct: 322 RKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 381

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            +N LI G C+ G +  A  I   +   G   +  T  TI  C  R ++Y    + L  M
Sbjct: 382 VFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 441

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G       Y  +I  + K G ++EA     +M +  VQ + ++YN +I  YCK+GK+
Sbjct: 442 MEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKV 501

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  L   M+  G + D YT+T LI G C A N+  A      M   G D N   Y  +
Sbjct: 502 KEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 561

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +  L K GK D A  +++ ++ K    D+  Y++++ ++
Sbjct: 562 ISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSM 600



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 182/404 (45%), Gaps = 5/404 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV   V +  ++++  C+    +    ++      GI P+  TYN++I    ++   S  
Sbjct: 200 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGV 259

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +L  M + G+  +  +Y  L+    + GK ++  ++F +M    +      +  +++ 
Sbjct: 260 EKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISW 319

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+      A  +F  L + G +P   TY  LI G+CK G +  A  ++ E+   G    
Sbjct: 320 NCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 379

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + + T++    R         I   M++KG+  D F   T+ + F ++ R  EA  ++ 
Sbjct: 380 QVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 439

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  GV+L  VSY  LI++YCKEG +E A  L  EM  +  + +  T+ ++I   CK G
Sbjct: 440 RMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQG 499

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +K AR     M   G D +   Y  ++        +D A+ +F  M +K    +S TY+
Sbjct: 500 KVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 559

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
            M+  L KA +   A  L     + G  I      A++ G  HS
Sbjct: 560 VMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI-GSMHS 602



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  +E  RVF  M+   L+    +  + L    K R  D  L  FR +   G    + + 
Sbjct: 149 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSL 208

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I+++GLC+ G +  ++ ++KE    G  P A TY TI+    ++R +    +IL  MK+
Sbjct: 209 TIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKK 268

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G  ++   Y  +I   VK G++ +     ++M   G++ DI  Y +LI+  C++G ++ 
Sbjct: 269 DGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKR 328

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+LL DE+ ++G     +T+  LIDG+CK G +  A + +  M   G +     +N +++
Sbjct: 329 AFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIN 388

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              + G ID A  +++ ME K    D FT +++     + KR   A + L   ++ GVR+
Sbjct: 389 GYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRL 448

Query: 422 LKSAQKAVVDGLRHSGCRREAKKI 445
              +   ++D     G   EAK++
Sbjct: 449 STVSYTNLIDVYCKEGNVEEAKRL 472



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/445 (22%), Positives = 194/445 (43%), Gaps = 39/445 (8%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           ++++   Y     F+ G  + + M + G+S D  +    +  A +   +   L+    M+
Sbjct: 138 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMV 197

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G+   V+S   ++  L + G+ +++ ++ ++     + P   T+N ++N   K+R   
Sbjct: 198 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFS 257

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
              ++ + ++K G V   VTY +LI+   K G++     +  E+ + G   +   YT+++
Sbjct: 258 GVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLI 317

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               R    K    +   +  KG       Y  +I    K+G +  A   M +M + GV 
Sbjct: 318 SWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 377

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT-------------------- 324
           +  V +NTLIN YC++G ++ A ++ D MEK+GF+ D +T                    
Sbjct: 378 ITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQW 437

Query: 325 ---------------HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
                          +T LID  CK GN++ A+     M+      N   YN ++    K
Sbjct: 438 LFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCK 497

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK+  A  ++ +M+      DS+TY+S++H  C A  +  A +L       G+      
Sbjct: 498 QGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 557

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
              ++ GL  +G   EA  +  +I+
Sbjct: 558 YTVMISGLSKAGKSDEAFGLYDEIK 582


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 210/471 (44%), Gaps = 42/471 (8%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           FC   R E+A  ++    D       P+VV+Y  +I+ +      D  Y +   M + GI
Sbjct: 175 FCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGI 234

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY ++I G  +  ++  +  +  +M++ G+ PD  +YN L+H    +GK  E  R
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M    L P   T+  +LN LC N     A   F  + + G  P +  Y ILI G  
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYA 354

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L     +L  + ++G +P+   +  I     +       + I + MK++G + D  
Sbjct: 355 TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414

Query: 254 GYCTVIAAFVKIGRLKEAT-----------------------------------DYMEQM 278
            +  +I A  K+GR+ +A                                    ++  +M
Sbjct: 415 NFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G++ D+V +NT++   C +G++  A  L+D ME+ G   D  ++T LI G C  G I
Sbjct: 475 LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRI 534

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A   L+ M  +G   +   YN ++    + G+ID A  VF  M          TYS++
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +H L   +R   A +L L+ + SG +        +++GL  + C  EA K+
Sbjct: 595 LHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKL 645



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 193/418 (46%), Gaps = 8/418 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMR 69
           +I +  FC+  RLE   A     ++ G   + +  N L+   C          IL  RM 
Sbjct: 98  SILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMP 157

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLG 126
           E G +PDVV+YN+L+ G         +L+LL  M +      PP+V SY ++++  F  G
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEG 217

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D+A  +F +M+   + P   T+  +++GLCK +  D A  +F+ +   G  P+  TYN
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G    G+ +    +L+E+   G  P+  TY +++     N + +       +M RK
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I  +   G L E  D +  MV +G+  D   +N +   Y K+  ++ A
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + ++M++QG   D      LID LCK G +  A L    M   G   N+  +N +V  
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           L    K + A   +  M  +    D   +++++ NLC   ++  A +L+    + G R
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 204/508 (40%), Gaps = 76/508 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-------- 68
            CKA  +++AE +    I  GV PD  TYN LI  Y     +     +L  M        
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307

Query: 69  -----------------REA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
                            REA          GI P+V  Y  LI G      LS   DLL+
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN 367

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M+E G+ PD   +N +     +    DEA  +F  M    L+P    F  +++ LCK  
Sbjct: 368 LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLG 427

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D+A+  F  +   G  P +  +N L+ GLC   +   A+    E+ + G  P+ + + 
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 222 TIM-KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TI+   C + +  K    ++  M+R G   D   Y T+I     +GR+ EA   ++ M++
Sbjct: 488 TILCNLCTKGQVMK-AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D  +YNTL++ YC+ G+++ AY +  EM + G      T++ ++ GL        
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----------------- 383
           A+     M   G   N+  YN I++ L K+  +D A  +F+S+                 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 384 ----------------------EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
                                  V D FTY  +  NL +   L     L  +  KSG   
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                 A+V  L H G    A    SK+
Sbjct: 727 NSRMLNALVRRLLHRGDITRAGAYLSKL 754



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 166/368 (45%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI    + K   +++A  I     + G+ PDVV +  LIDA C+    D      N+M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G++P++  +NSL+ G         + +   EML  GI PDV  +N+++  L   G+ 
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A R+   M      P   ++  ++ G C     D A +    +   G  P+  TYN L
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G C+AGR+  A  + +E+  +G  P  +TY+TI+   F  R++    E+   M   G 
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            ++ + Y  ++    K   + EA    + + +   QL+I ++N +I    K G+ E A  
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   D +T+ ++ + L + G ++        M K G   N    N +V RL 
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 369 KDGKIDHA 376
             G I  A
Sbjct: 740 HRGDITRA 747



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 6/313 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  +C  C   ++ KA+ +I    R+G  PDV++Y  LI  +C     D     L+ M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ PD  TYN+L+ G  R   +  +  +  EML  GI P V +Y++++H LF   + 
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  ++ +MI          +NI+LNGL KN   D A ++F+ L    F  E+ T+NI+
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K+GR   A  +   +   G  P+  TY  I +        +   ++ SAM++ G 
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE------GK 302
           T +      ++   +  G +  A  Y+ ++      L+  +   LI+L  ++        
Sbjct: 725 TPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATS 784

Query: 303 LEAAYLLLDEMEK 315
           L   Y +L+E +K
Sbjct: 785 LPEKYRVLNEAKK 797



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 173/394 (43%), Gaps = 11/394 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + L+  V  F       CK  R++ A       +  GV P++  +N L+   C
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
               ++        M   GI PDVV +N+++        +  +  L+D M  +G  PDV 
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVI 519

Query: 114 SYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           SY +L+  HCL  +G+ DEA +    M+   L P   T+N +L+G C+    D+A  +FR
Sbjct: 520 SYTTLIGGHCL--VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            + ++G  P +VTY+ ++ GL    R   A+ +   +  SG   N   Y  I+    +N 
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
                 ++  ++  K +  +   +  +I A  K GR ++A      + + G+  D+ +Y 
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            +     +EG LE    L   MEK G   +      L+  L   G+I  A  +L  +++ 
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEK 757

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
            F         ++  L +D    HA ++ E   V
Sbjct: 758 NFSLEASTTAMLISLLSRDEYHHHATSLPEKYRV 791



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 176/396 (44%), Gaps = 29/396 (7%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           R + +S   +    +I    R+  L    +L L D +L    P  + ++N L+  + ++ 
Sbjct: 4   RVSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVS 63

Query: 127 -------KPDEANRVFQDMI--CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
                  + +    +F  MI  C   +TP   T++I++   C+    ++    F  + K 
Sbjct: 64  GRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKS 123

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
           G+    +  N L+KGLC A RLR A  IL K + + G  P+ ++Y T++K     ++ + 
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEE 183

Query: 236 GLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            LE+L  M   + +    +   Y TVI  F   G++ +A +   +M+  G+Q ++V+Y T
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I+  CK   ++ A  +  +M  +G + D  T+  LI G    G  K     LE M+  G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
              +   Y  +++ L  +G+   A   F+SM  K    +   Y  ++H       L    
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363

Query: 409 KLLLSCLKSGVR---------ILKSAQKAVVDGLRH 435
            LL   +++G+              A+KA++D   H
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 207/418 (49%), Gaps = 23/418 (5%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C+A ++EK+  +  +  R GV PDV TY +LID++C+    +   +  + MR  G
Sbjct: 458 VITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVG 517

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP+VVTY +L+    ++  L  + D+   M++    P+  +Y++L+  L + G+  +A 
Sbjct: 518 CSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKAC 577

Query: 133 RVFQDMICGD----------------LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V++ +I                   + P   T+  +++GLCK +   +A  +   +   
Sbjct: 578 EVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA 637

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI G CK G++  A+ +   +   G+ P+  TYT+++   F++ +  L 
Sbjct: 638 GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M       +   Y  +I    K+G +++A + +  M   G   ++V+Y  LI+ 
Sbjct: 698 MKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDG 757

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K GK +A+  L  +M  +G   +  T+ +LI+  C AG +  A L L+ M    +  +
Sbjct: 758 LGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKH 817

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKL 410
           L+ Y+C V    K  K   ++ + E ME  ++      Y  ++ +  KA RL +A +L
Sbjct: 818 LQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALEL 873



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 200/428 (46%), Gaps = 28/428 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+   +N L+  YC    +   Y + NRM   G  P  V YN  I        L  +
Sbjct: 336 GCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA 395

Query: 97  --LDLL----DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             LDL+    +EML      +  +  +   CL  +GK ++A ++ ++M+     P T+T+
Sbjct: 396 ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTY 455

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
             ++  LC+ +  + +  +F+ +++ G  P++ TY ILI   CKAG +  AR    E+  
Sbjct: 456 TKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 515

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G +PN +TYT ++    ++++     +I   M       +   Y  +I    K G +++
Sbjct: 516 VGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQK 575

Query: 271 ATDYMEQMV-TDG---------------VQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           A +  E+++ T G               +  ++V+Y  LI+  CK  K+  A+ LLD M 
Sbjct: 576 ACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAML 635

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G E ++  +  LIDG CK G I  A+     M K G+  ++  Y  ++DR+ KDG++D
Sbjct: 636 AAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLD 695

Query: 375 HAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
            A+ V   M + DS      TY++M+  L K   +  A  LL    + G         A+
Sbjct: 696 LAMKVLSEM-LNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754

Query: 430 VDGLRHSG 437
           +DGL  +G
Sbjct: 755 IDGLGKTG 762



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 192/464 (41%), Gaps = 61/464 (13%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDA----------------- 51
           L N  V  +C A     A  +       G  P  V YN+ I +                 
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVE 402

Query: 52  ------------------------YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
                                    C    F+  + IL  M   G  PD  TY  +I   
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
            +   +  S  L  EM   G+ PDV++Y  L+    + G  ++A   F +M     +P  
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+  +L+   K++    A  +F  +      P  VTY+ LI GLCKAG ++ A  + ++
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 208 L-GDSGH---------------APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           L G SG+               APN +TY  ++    + +K     E+L AM   G   +
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPN 642

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I  F KIG++  A +   +M   G    + +Y +LI+   K+G+L+ A  +L 
Sbjct: 643 QIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM       +  T+T +IDGL K G I+ A   L  M + G   N+  Y  ++D LGK G
Sbjct: 703 EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           K D ++ +F+ M  K    +  TY  ++++ C A  L  A  LL
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLL 806



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 186/423 (43%), Gaps = 31/423 (7%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D V    +I    +   F+   + L+RMR     P+VVTY +L++G  +         ++
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           + M+  G  P+   +NSL+H     G    A ++F  M      P    +NI +  +C  
Sbjct: 330 NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQ 389

Query: 161 RYTDNA------LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
               NA       +++  +     V   V      + LC  G+   A  ILKE+   G  
Sbjct: 390 EELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFV 449

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TYT ++    + +K +    +   MKR G   D + Y  +I +F K G +++A  +
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M + G   ++V+Y  L++ Y K  +L  A+ +   M       +  T++ LIDGLCK
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
           AG I+ A                E Y  ++   G  G ++     FE  +      +  T
Sbjct: 570 AGEIQKA---------------CEVYEKLI---GTSGNVESDF-YFEGNDTCTIAPNVVT 610

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y +++  LCKA+++  A +LL + L +G    +    A++DG    G    A+++   +R
Sbjct: 611 YGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV--FLR 668

Query: 451 MAK 453
           M K
Sbjct: 669 MTK 671



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 175/415 (42%), Gaps = 15/415 (3%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+L+   C+   +D     L R+++ G  P  VTYN+L+        +     +  EM  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 106 MGIPPDVWSYNSLMHCLFQLGK-PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
            G   D  +       L ++G+  D  N + ++    D   CT     M++GL +    +
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQ----MISGLMEASLFN 288

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+     ++ +  +P +VTY  L+ G  K  +    + I+  +   G  PN   + +++
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT------DYMEQM 278
                   Y    ++ + M   G       Y   I +      L  A          E+M
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +     L+ V+        C  GK E A+ +L EM ++GF  D  T+T +I  LC+A  +
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           + + L  + M + G + ++  Y  ++D   K G I+ A + F+ M       +  TY+++
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +H   K+K+L  A  +    + +          A++DGL  +G  ++A ++  K+
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 36/291 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +++ A+ + +   + G LP V TY  LID   +    D    +L+ M     +P+
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY ++I G ++   +  +L+LL  M E G  P+V +Y +L+  L + GK D + ++F+
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFK 772

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNA------------------------------ 166
            M      P   T+ +++N  C     D A                              
Sbjct: 773 QMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKF 832

Query: 167 ---LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT---Y 220
              L +   ++ H  VP    Y +LI    KAGRL TA  + KEL +   + N  +   Y
Sbjct: 833 IASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMY 892

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
            ++++      + +    + + M RKG   D   + +++   +++ +  EA
Sbjct: 893 ASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEA 943



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/418 (22%), Positives = 167/418 (39%), Gaps = 58/418 (13%)

Query: 50  DAYCQFVSF-DAGYTILNRMREAGISPDVVT---YNSLIAGATRNSLLSCSLDLLDEMLE 105
           DA  + + F D   T    +RE G     V     N L+    R+ L   +L+ L  + +
Sbjct: 138 DALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKD 197

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G  P   +YN+L+  L   G+ +   RV ++M         +T       LCK     +
Sbjct: 198 FGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWAD 257

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           AL M   L+K  F  + V    +I GL +A     A   L  +  +   PN +TY T++ 
Sbjct: 258 ALNM---LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLS 314

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              + ++                    FG+C  I               +  M+T+G   
Sbjct: 315 GFLKKKQ--------------------FGWCKRI---------------INMMMTEGCNP 339

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           +   +N+L++ YC  G    AY L + M   G       + I I  +C    +  A L L
Sbjct: 340 NPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAEL-L 398

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKD---------GKIDHAINVFESME----VKDSFTYS 392
           + + K+ ++  L A +C+++++            GK + A  + + M     V D+ TY+
Sbjct: 399 DLVEKV-YEEMLAA-SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYT 456

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++  LC+AK++  +  L     ++GV         ++D    +G   +A+    ++R
Sbjct: 457 KVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 216/433 (49%), Gaps = 39/433 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + E+AE ++ + IR    P+ VT+   I A+CQ    D    +L +M + G +PD
Sbjct: 17  LCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPD 76

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ Y++L+ G + +  +  +L LL+ ML     P+   YN+ +  L   G+ +E   +  
Sbjct: 77  VIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIA 133

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P  ATF+ ++N LC+NR  + A+ +   +QK+G++P++V+YN +I       
Sbjct: 134 EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA 193

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +LK +      P+ I++  ++KC  + +++   +E+++ M +K    +   + 
Sbjct: 194 RADDALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFN 250

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I +  + G++K+A +  E M       DIV+Y++LIN + ++G  E A+ L   M  +
Sbjct: 251 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 310

Query: 317 G------------------------------FEC--DKYTHTILIDGLCKAGNIKGARLH 344
                                           +C  ++ T  ILI  LC+ G +  A   
Sbjct: 311 ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDV 370

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKR 403
            E M K G   ++  YN +++   + G++D A+    +M  + D+ +Y+S++  LC+A+R
Sbjct: 371 YEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAER 430

Query: 404 LPSASKLLLSCLK 416
              A KL+   L+
Sbjct: 431 WKDAEKLVTEMLR 443



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 36/339 (10%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           M + PD ++YN+++  L    + ++A  + ++MI     P   TF   +   C+N   D 
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60

Query: 166 ALRMFRGLQKHGFVPELVTYNILI--------------------------------KGLC 193
           A+ +   + K+G  P+++ Y+ L+                                KGLC
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLC 120

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            AGR      ++ E+      PN  T++T++    +NR  +  +E+L  M++ GY  D  
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T+I+ F    R  +A   ++ M+    + D +S+N ++   CK  +   A  L+ +M
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K+    ++ T  ILID LC+ G +K A    E M K     ++  Y+ +++   + G  
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 297

Query: 374 DHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
           + A ++F SM  + D F+Y++ +  LC A R   A +L+
Sbjct: 298 EMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELI 336



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 168/342 (49%), Gaps = 9/342 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + +T   N  +   C A R E+   +I + +R    P+  T++ LI++ CQ    + 
Sbjct: 103 MLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEY 162

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L +M++ G  PDVV+YN++I+  +  +    +L LL  ML     PD  S+N+++ 
Sbjct: 163 AVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLK 219

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           CL +  +  +A  +   M+  D      TFNI+++ LC+N    +A+ +F  + K+  +P
Sbjct: 220 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMP 279

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++VTY+ LI G  + G    A  + + +       +  +Y   +K      ++    E++
Sbjct: 280 DIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELI 336

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +    +   +  +I++  + G +  A D  EQM   G+  DI +YN LIN Y ++
Sbjct: 337 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQ 396

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           G+L+ A   L  M     E D  ++  ++ GLC+A   K A 
Sbjct: 397 GRLDDALKFLSTM---PCEPDTISYNSILKGLCRAERWKDAE 435



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 6/264 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  K  T   N  +   CKA R   A  ++   ++     + +T+N+LID+ CQ      
Sbjct: 205 MLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD 264

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +   M +    PD+VTY+SLI G +   L   + DL   M       D++SYN+ + 
Sbjct: 265 AIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLK 321

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L    + D+A  +  DM+  D  P   TFNI+++ LC+    + A+ ++  + K+G  P
Sbjct: 322 GLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITP 381

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++ TYN LI G  + GRL  A   LK L      P+ I+Y +I+K   R  ++K   +++
Sbjct: 382 DIFTYNALINGYSEQGRLDDA---LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLV 438

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVK 264
           + M RK  T +   +      F+K
Sbjct: 439 TEMLRKNCTPNEVTFKYANQLFIK 462


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 5/362 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK      A+ +  + +  G+ P+V TYN +ID +C F  +     +L  M E  I+PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+T+N+LI+ + +   L  +  L DEML   I PD  +YNS+++   +  + D+A  +F 
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M     +P   TFN +++  C+ +  D  +++ R + + G V    TYN LI G C+  
Sbjct: 426 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A+ + +E+   G  P+ IT   ++     N K +  LE+   ++      D   Y 
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K  ++ EA D    +   GV+ D+ +YN +I+ +C +  +  A +L  +M+  
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E D  T+  LI G  KAG I  +   +  M   GF  +      + D L  DG++D +
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660

Query: 377 IN 378
            +
Sbjct: 661 FS 662



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 8/406 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   R+ +A A++   +  G+  DVVTY  +++  C+     +   +L++M 
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  I PDVV Y+++I    ++   S +  L  EMLE GI P+V++YN ++      G+  
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DMI  ++ P   TFN +++   K      A ++   +      P+ VTYN +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK  R   A    K + D   +P+ +T+ TI+    R ++   G+++L  + R+G  
Sbjct: 409 YGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F ++  L  A D  ++M++ GV  D ++ N L+  +C+  KLE A  L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + ++    + D   + I+I G+CK   +  A      +   G + +++ YN ++     
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              I  A  +F  M+      D+ TY++++    KA  +  + +L+
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/443 (22%), Positives = 207/443 (46%), Gaps = 23/443 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---------------Q 54
            NI +  FC  ++L  + +      +LG  PDVVT+N L+   C                
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
              F     + ++M E G++P V+T+N+LI G      +  +  L+++M+  G+  DV +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y ++++ + ++G    A  +   M    + P    ++ +++ LCK+ +  +A  +F  + 
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           + G  P + TYN +I G C  GR   A+ +L+++ +    P+ +T+  ++    +  K  
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++   M  +    D   Y ++I  F K  R  +A    + M +     D+V++NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTII 439

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           ++YC+  +++    LL E+ ++G   +  T+  LI G C+  N+  A+   + M   G  
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            +    N ++    ++ K++ A+ +FE +++     D+  Y+ ++H +CK  ++  A  L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559

Query: 411 LLSCLKSGVRILKSAQKAVVDGL 433
             S    GV         ++ G 
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGF 582



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 200/449 (44%), Gaps = 30/449 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLP-DVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  F + NR + A ++    + +  +P ++ ++N+LI  +C         +   ++ 
Sbjct: 110 NKVIGVFVRMNRPDVAISLY-RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDVVT+N+L+ G      +S +L L   M+E G                      
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-------------------- 208

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M+   LTP   TFN ++NGLC       A  +   +   G   ++VTY  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+CK G  ++A  +L ++ ++   P+ + Y+ I+    ++  +     + S M  KG  
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + F Y  +I  F   GR  +A   +  M+   +  D++++N LI+   KEGKL  A  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            DEM  +    D  T+  +I G CK      A+   + M       ++  +N I+D   +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
             ++D  + +   +     V ++ TY++++H  C+   L +A  L    +  GV      
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              ++ G   +    EA ++   I+M+KI
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKI 533



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           F S D      + M  +      V  N +I    R +    ++ L  +M    IP +++S
Sbjct: 84  FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           +N L+ C     K   +   F  +      P   TFN +L+GLC       AL +F  + 
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 175 KHGFV---------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           + GF+               P ++T+N LI GLC  GR+  A  ++ ++   G   + +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y TI+    +    K  L +LS M+      D   Y  +I    K G   +A     +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 338
             G+  ++ +YN +I+ +C  G+   A  LL +M ++    D  T   LI    K G + 
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           +  +L  E +++  F   +  YN ++    K  + D A ++F+ M   D  T+++++   
Sbjct: 384 EAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           C+AKR+    +LL    + G+     A     + L H  C  +       +    ISH
Sbjct: 443 CRAKRVDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 109/210 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +C+A R+++   ++ +  R G++ +  TYN LI  +C+  + +A   +   M 
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD +T N L+ G   N  L  +L+L + +    I  D  +YN ++H + +  K D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  +    + P   T+N+M++G C      +A  +F  ++ +G  P+  TYN LI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +G  KAG +  +  ++ E+  +G + +A T
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFT 644


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 196/397 (49%), Gaps = 4/397 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C   ++ +A     + + +G   D V Y  LI   C+     A   +L R+    + P+V
Sbjct: 138 CLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNV 197

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y+++I G  ++  ++ + DL  EM+  GI P+V +Y++L+   F +G+  +A  +F  
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNK 257

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI  ++ P   TFNI+++G CK+        +F  + K G  P +VTY  L+ G C    
Sbjct: 258 MILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE 317

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A+ IL  +   G  P+  +Y  ++    + +K    + +   M  K    D   Y +
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    K+G++  A   +++M   GV  DI++Y+++++  CK  +++ A  LL +++ QG
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQG 437

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              + YT+TILIDGLCK G ++ A    E +   G++  +  Y  ++      G  D A+
Sbjct: 438 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAL 497

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            +   M+    + D+ TY  ++ +L        A KL
Sbjct: 498 ALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 213/455 (46%), Gaps = 20/455 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           TF   N +  A ++    +R    P  + +N ++ +  +   +    ++  +M   GI+P
Sbjct: 50  TFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP 109

Query: 76  ----------------DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
                           + +T+ +LI G      +  +L   D ++ MG   D   Y +L+
Sbjct: 110 VLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLI 169

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           H L ++G+   A  + + +    + P    ++ +++G+CK+++ ++A  ++  +   G  
Sbjct: 170 HGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 229

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P +VTY+ LI G    G+L+ A  +  ++      P+  T+  ++    ++ K K G  +
Sbjct: 230 PNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV 289

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            + M ++G   +   YC+++  +  +  + +A   +  M   GV  DI SYN LI+ +CK
Sbjct: 290 FAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCK 349

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
             K++ A  L  EM  +    D  T+  LIDGLCK G I  A   ++ M+  G   ++  
Sbjct: 350 IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 409

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y+ I+D L K+ ++D AI +   ++ +    + +TY+ ++  LCK  RL  A  +    L
Sbjct: 410 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 469

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             G  I  +    ++ G  + G   EA  + SK++
Sbjct: 470 VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 139/274 (50%), Gaps = 1/274 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V  FCK  ++++ + +    ++ G+ P+VVTY  L+D YC     +   +IL  M 
Sbjct: 270 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMS 329

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++PD+ +YN LI G  +   +  +++L  EM    I PDV +YNSL+  L +LGK  
Sbjct: 330 QRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKIS 389

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++  +M    + P   T++ +L+ LCKN   D A+ +   L+  G  P + TY ILI
Sbjct: 390 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 449

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK GRL  A  I ++L   G+     TYT ++        +   L +LS MK     
Sbjct: 450 DGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCI 509

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            D   Y  +I +        +  + + +M+T G+
Sbjct: 510 PDAVTYEIIIRSLFDKDE-NDKAEKLREMITRGL 542



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 36/331 (10%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  F    +L+ A  +    I   + PDV T+N+L+D +C+      G T+   M + GI
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY SL+ G      ++ +  +L  M + G+ PD+ SYN L+    ++ K DEA  
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F++M    + P   T+N +++GLCK      AL++   +   G  P+++TY+ ++  LC
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K  ++  A  +L +L D G  PN  TYT ++                             
Sbjct: 419 KNHQVDKAIALLTKLKDQGIRPNMYTYTILID---------------------------- 450

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           G C       K GRL++A +  E ++  G  + + +Y  +I+ +C +G  + A  LL +M
Sbjct: 451 GLC-------KGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503

Query: 314 EKQGFECDKYTHTILIDGLC-KAGNIKGARL 343
           +      D  T+ I+I  L  K  N K  +L
Sbjct: 504 KDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 47/255 (18%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I Y++I      N        + S + R+  T     +  ++ + VK           
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 276 EQMVTDGV-----------QL-----DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
           +QM  +G+           QL     + +++ TLI   C +G++  A L  D +   GF+
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D+  +  LI GLCK G  + A   L+ + ++  D NL   N ++               
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAA---LDLLRRV--DGNLVQPNVVM--------------- 199

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
                      YS+++  +CK K +  A  L    +  G+        A++ G    G  
Sbjct: 200 -----------YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 440 REAKKIQSKIRMAKI 454
           ++A  + +K+ +  I
Sbjct: 249 KDAIDLFNKMILENI 263


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 211/471 (44%), Gaps = 42/471 (8%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           FC   R E+A  ++    D       P+VV+Y ++I+ +      D  Y +   M + GI
Sbjct: 175 FCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGI 234

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY ++I G  +  ++  +  +  +M++ G+ PD  +YN L+H    +GK  E  R
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M    L P   T+  +LN LC N     A  +F  + + G  P +  Y ILI G  
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYA 354

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L     +L  + ++G +P+   +  I     +       + I + MK++G + D  
Sbjct: 355 TKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414

Query: 254 GYCTVIAAFVKIGRLKEAT-----------------------------------DYMEQM 278
            Y  +I A  K+GR+ +A                                    ++  +M
Sbjct: 415 NYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM 474

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G++ D+V +NT++   C +G++  A  L+D ME+ G      ++T LI G C  G I
Sbjct: 475 LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRI 534

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A   L+ M  +G   +   YN ++    + G+ID A  VF  M          TYS++
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTI 594

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +H L   +R   A +L L+ + SG +        +++GL  + C  EA K+
Sbjct: 595 LHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKL 645



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 196/418 (46%), Gaps = 8/418 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF-DAGYTILNRMR 69
           +I +  FC+  RLE   A     ++ G   + +  N L+   C      +A   ++ RM 
Sbjct: 98  SILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMP 157

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLG 126
           E G +PDVV+YN+L+ G         +L+LL  M +      PP+V SY  +++  F  G
Sbjct: 158 ELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEG 217

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D+A  +F +M+   + P   T+  +++GLCK +  D A  +F+ +   G  P+  TYN
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G    G+ +    +L+E+   G  P+  TY +++     N + +    +  +M RK
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I  +   G L E  D +  MV +G+  D   +N +   Y K+  ++ A
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + ++M++QG   D   +  LID LCK G +  A L    M   G   N+  +N +V  
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           L    K + A   +  M  +    D   +++++ NLC   ++  A +L+    + G R
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 196/495 (39%), Gaps = 74/495 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  +++AE +    I  GV PD  TYN LI  Y     +     +L  M   G+ PD
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY SL+     N     +  L D M+  GI P+V  Y  L+H     G   E + +  
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN 367

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   L+P    FNI+     K    D A+ +F  +++ G  P++V Y  LI  LCK G
Sbjct: 368 LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE------------------ 238
           R+  A     ++ + G APN   + +++       K++   E                  
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFN 487

Query: 239 -----------------ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                            ++  M+R G       Y T+I     +GR+ EA   ++ M++ 
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D  +YNTL++ YC+ G+++ AY +  EM + G      T++ ++ GL        A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM------------------ 383
           +     M   G   N+  YN I++ L K+  +D A  +F+S+                  
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667

Query: 384 ---------------------EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
                                 V D FTY  +  NL +   L     L  +  KSG    
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727

Query: 423 KSAQKAVVDGLRHSG 437
                A+V  L H G
Sbjct: 728 SRMLNALVRRLLHRG 742



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 175/391 (44%), Gaps = 8/391 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PD  TY++LI  +C+    + G+     + ++G   + +  N L+ G      L  ++
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 98  DLL-DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD---LTPCTATFNIM 153
           D+L   M E+G  PDV SYN+L+       + +EA  +   M         P   ++ I+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NG       D A  +F  +   G  P +VTY  +I GLCKA  +  A  + +++ D G 
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  TY  ++       K+K  + +L  M   G   D + Y +++      GR +EA  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             + M+  G++ ++  Y  LI+ Y  +G L   + LL+ M + G   D +   I+     
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K   I  A      M + G   ++  Y  ++D L K G++D A+  F  M       + F
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            ++S+V+ LC   +   A +     L  G+R
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 166/369 (44%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI    + K   +++A  I     + G+ PDVV Y  LIDA C+    D      N+
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQ 438

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++P++  +NSL+ G         + +   EML  GI PDV  +N+++  L   G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A R+   M      P   ++  ++ G C     D A +    +   G  P+  TYN 
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G C+AGR+  A  + +E+  +G  P  +TY+TI+   F  R++    E+   M   G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
             ++ + Y  ++    K   + EA    + + +   QL+I ++N +I    K G+ E A 
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G   D +T+ ++ + L + G ++        M K G   N    N +V RL
Sbjct: 679 HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 368 GKDGKIDHA 376
              G I  A
Sbjct: 739 LHRGDITRA 747



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 6/313 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  +C  C   ++ KA+ +I    R+G  P V++Y  LI  +C     D     L+ M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVM 544

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ PD  TYN+L+ G  R   +  +  +  EML  GI P V +Y++++H LF   + 
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  ++ +MI          +NI+LNGL KN   D A ++F+ L    F  E+ T+NI+
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K+GR   A  +   +   G  P+  TY  I +        +   ++ SAM++ G 
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE------GK 302
           T +      ++   +  G +  A  Y+ ++      L+  +   LI+L  ++        
Sbjct: 725 TPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATS 784

Query: 303 LEAAYLLLDEMEK 315
           L   Y +L+E +K
Sbjct: 785 LPEKYRVLNEAKK 797



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 163/371 (43%), Gaps = 4/371 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A       +  GV P++  +N L+   C    ++        M   GI PD
Sbjct: 423 LCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPD 482

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           VV +N+++        +  +  L+D M  +G  P V SY +L+  HCL  +G+ DEA + 
Sbjct: 483 VVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCL--VGRIDEAAKS 540

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
              M+   L P   T+N +L+G C+    D+A  +FR + ++G  P +VTY+ ++ GL  
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             R   A+ +   +  SG   N   Y  I+    +N       ++  ++  K +  +   
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           +  +I A  K GR ++A      + + G+  D+ +Y  +     +EG LE    L   ME
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           K G   +      L+  L   G+I  A  +L  +++  F         ++  L +D    
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHH 780

Query: 375 HAINVFESMEV 385
           HA ++ E   V
Sbjct: 781 HATSLPEKYRV 791



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 175/396 (44%), Gaps = 29/396 (7%)

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           R + +S   +    +I    R+  L    +L L D +L    P  V ++N L+  + ++ 
Sbjct: 4   RVSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVS 63

Query: 127 -------KPDEANRVFQDMI--CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
                  + +    +F  MI  C   +TP   T++I++   C+    ++    F  + K 
Sbjct: 64  GRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKS 123

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
           G+    +  N L+KGLC A RL  A  IL K + + G  P+ ++Y T++K     ++ + 
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEE 183

Query: 236 GLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            LE+L  M   + +    +   Y  VI  F   G++ +A +   +M+  G+Q ++V+Y T
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +I+  CK   ++ A  +  +M  +G + D  T+  LI G    G  K     LE M+  G
Sbjct: 244 VIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHG 303

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
              +   Y  +++ L  +G+   A  +F+SM  K    +   Y  ++H       L    
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363

Query: 409 KLLLSCLKSGVR---------ILKSAQKAVVDGLRH 435
            LL   +++G+              A+KA++D   H
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399


>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
 gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
 gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 190/406 (46%), Gaps = 5/406 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    + +R E AEAI  D   +G      TY+  I   C+   FD    +L+ M  
Sbjct: 48  NRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMET 107

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+  +N  +    R + +  ++     M++ G  PDV SY  L++ LF+ GK  +
Sbjct: 108 LGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTD 167

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP-ELVTYNILI 189
           A  ++  MI   ++P       ++ GLC  R  D A  M     K   V    V YN LI
Sbjct: 168 AVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CKAGR+  A  +   +   G  P+ +TY  ++   + N   K    +++ M R G  
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  ++    ++    +  ++M + +      D+VSY+TLI  +C+      AY L
Sbjct: 288 LDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRL 347

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +EM ++G   +  T+T LI    + GN   A+  L+ M ++G   +   Y  I+D L K
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407

Query: 370 DGKIDHAINVFESM---EV-KDSFTYSSMVHNLCKAKRLPSASKLL 411
            G +D A  VF  M   E+  D+ +Y+S++  LC++ R+  A KL 
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 209/435 (48%), Gaps = 11/435 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  + +  +A++ D   LG +PD+  +N+ +D  C+             M + G 
Sbjct: 86  ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-N 132
            PDVV+Y  LI G  R   ++ ++++ + M+  G+ PD  +  +L+  L    K D A  
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V +++    +   T  +N +++G CK    + A  +   + K G  P+LVTYN+L+   
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFD 251
                L+ A  ++ E+  SG   +A +Y  ++K  C  +   K    ++  M+ +G+  D
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-D 324

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y T+I  F +    ++A    E+M   G+ +++V+Y +LI  + +EG    A  LLD
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M + G   D+  +T ++D LCK+GN+  A      M +     +  +YN ++  L + G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           ++  AI +FE M+ K    D  T+  ++  L + K+L +A K+    +  G  +     +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL----DR 500

Query: 428 AVVDGLRHSGCRREA 442
            V D L  + C   A
Sbjct: 501 DVSDTLIKASCSMSA 515



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 42/383 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   C+ N++  A       ++ G  PDVV+Y +LI+   +         I N M 
Sbjct: 117 FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176

Query: 70  EAGISPD------------------------------------VVTYNSLIAGATRNSLL 93
            +G+SPD                                     V YN+LI+G  +   +
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  L   M ++G  PD+ +YN L++  +       A  V  +M+   +     ++N +
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296

Query: 154 LNGLCKNRYTDNALR-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           L   C+  + D     M + ++  GF  ++V+Y+ LI+  C+A   R A  + +E+   G
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              N +TYT+++K   R     +  ++L  M   G + D   Y T++    K G + +A 
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 330
                M+   +  D +SYN+LI+  C+ G++  A  L ++M  +G EC  D+ T   +I 
Sbjct: 416 GVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIG 473

Query: 331 GLCKAGNIKGARLHLEYMNKIGF 353
           GL +   +  A    + M   GF
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKGF 496



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 35/283 (12%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI-------------- 49
           KLST + N  +  FCKA R+EKAEA+     ++G  PD+VTYN+L+              
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276

Query: 50  ------------DAY---------CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
                       DAY         C+    D  Y  + +  E     DVV+Y++LI    
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFC 336

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           R S    +  L +EM + G+  +V +Y SL+    + G    A ++   M    L+P   
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +  +L+ LCK+   D A  +F  + +H   P+ ++YN LI GLC++GR+  A  + +++
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
                 P+ +T+  I+    R +K     ++   M  KG+T D
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 5/292 (1%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y S +  L + G  D A +VF +M        +  +N  +  L +    + A  ++  +
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
           +  GF     TY+  I GLCK  +      +L ++   G  P+   +   +    R  K 
Sbjct: 71  KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              ++    M ++G   D   Y  +I    + G++ +A +    M+  GV  D  +   L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190

Query: 294 INLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +   C   K++ AY ++ +E++    +     +  LI G CKAG I+ A     YM+KIG
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            + +L  YN +++    +  +  A  V   M       D+++Y+ ++   C+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 5/233 (2%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           + Y   I  L K+G +  A  +  E+  S +   +  Y   +    R  +++L   I   
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           MK  G++   F Y   I+   K+ +       +  M T G   DI ++N  ++L C+E K
Sbjct: 70  MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A      M ++G E D  ++TILI+GL +AG +  A      M + G   + +A   
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 363 IVDRLGKDGKIDHAINV----FESMEVK-DSFTYSSMVHNLCKAKRLPSASKL 410
           +V  L    K+D A  +     +S  VK  +  Y++++   CKA R+  A  L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 202/382 (52%), Gaps = 4/382 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + KA   E+A  +  + +  GV  ++ TYN+++   C+    D   ++L+ M   G+ P+
Sbjct: 405 YLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 463

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV+YN +I G  R   +  +  +  +ML   + P+V +Y+ L+   F+ G  ++A  +F 
Sbjct: 464 VVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 523

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  ++ P   TFN ++NGLCK      A    +   + GF+P  +TYN ++ G  K G
Sbjct: 524 QMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 583

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            + +A  + +E+ + G +PN +TYT+++    ++ +  L L+    M+ KG   D   Y 
Sbjct: 584 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 643

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F K   ++ A D   +++  G+  + + YN++I+ +     +EAA +   +M   
Sbjct: 644 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 703

Query: 317 GFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
              CD  T+T LIDGL K G  +  + L++E ++K G   ++  ++ +V+ L   G++++
Sbjct: 704 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSK-GIVPDIITFHVLVNGLCNKGQLEN 762

Query: 376 AINVFESMEVKDSFTYSSMVHN 397
           A  + E M+ K+  T S +++N
Sbjct: 763 ARKILEEMDRKN-MTPSVLIYN 783



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 206/397 (51%), Gaps = 4/397 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  ++++A +++ + +  G++P+VV+YN +I  +C+  + D   ++ + M  
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 492

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+VVTY+ LI G  +      +LDL D+ML + I P  +++N++++ L ++G+  E
Sbjct: 493 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 552

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    ++ +     P   T+N +++G  K    D+AL ++R + + G  P +VTY  LI 
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 612

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK+ R+  A     E+ + G   +   Y+ ++    + R  +   ++   +   G + 
Sbjct: 613 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 672

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I+ F  +  ++ A  + ++M+ D +  D+ +Y TLI+   KEG+L  A  L 
Sbjct: 673 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   D  T  +L++GLC  G ++ AR  LE M++     ++  YN ++    ++
Sbjct: 733 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 792

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKR 403
           G +  A  + + M     V D  TY  +++   K  R
Sbjct: 793 GNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 197/400 (49%), Gaps = 9/400 (2%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C +  +EKA  +       G+ P V   N L+  Y +   ++    + +   + G++ ++
Sbjct: 371 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NI 429

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVF 135
            TYN +++   +   +  +  LLD M+  G+ P+V SYN ++  HC  + G  D A+ VF
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHC--RKGNMDMASSVF 487

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            DM+  DL P   T++I+++G  K   ++ AL +F  +      P   T+N +I GLCK 
Sbjct: 488 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 547

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  AR  LK   + G  P+ +TY +I+    +       L +   M   G + +   Y
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  F K  R+  A    ++M   G++LD+ +Y+ LI+ +CK   +E+A  L  E+ +
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   ++  +  +I G     N++ A +  + M       +L  Y  ++D L K+G++  
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 727

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           A +++  M     V D  T+  +V+ LC   +L +A K+L
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 195/426 (45%), Gaps = 9/426 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+E+AE    +    GV  D   Y+++I A C+  + + G  +L  M+E G  P   
Sbjct: 232 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T+ S+I        +  +L L +EM+  G P ++    SLM      G  D A  +F  +
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   T+++++ G C +   + A  ++  ++ +G  P +   N L++G  KA   
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  E  D G A N  TY  +M    +  K      +L  M  +G   +   Y  +
Sbjct: 412 EEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    + G +  A+     M+   ++ ++V+Y+ LI+   K+G  E A  L D+M     
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
               +T   +I+GLCK G +  AR  L+   + GF  +   YN IVD   K+G ID A+ 
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           V+  M       +  TY+S+++  CK+ R+  A K      + G+ +  +A  A++DG  
Sbjct: 591 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF- 649

Query: 435 HSGCRR 440
              C+R
Sbjct: 650 ---CKR 652



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 189/421 (44%), Gaps = 49/421 (11%)

Query: 26  AEAIIIDGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           A+  +++ +RL       G   ++V    L+  YC   + D+   + N++ E G+ P+ V
Sbjct: 302 AQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKV 361

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ LI G   +  +  + +L  +M   GIPP V++ NSL+    +    +EA+++F + 
Sbjct: 362 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 421

Query: 139 I-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           + CG       T+NIM++ LCK    D A  +   +   G VP +V+YN +I G C+ G 
Sbjct: 422 VDCG--VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGN 479

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +  ++      PN +TY+ ++   F                             
Sbjct: 480 MDMASSVFSDMLARDLKPNVVTYSILIDGNF----------------------------- 510

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
                 K G  ++A D  +QM++  +     ++NT+IN  CK G++  A   L    ++G
Sbjct: 511 ------KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F     T+  ++DG  K GNI  A      M + G   N+  Y  +++   K  +ID A+
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
              + M  K    D   YS+++   CK + + SA  L    L+ G+   +    +++ G 
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684

Query: 434 R 434
           R
Sbjct: 685 R 685



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 195/438 (44%), Gaps = 5/438 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L  R+ N  +  + +ANR+E A       I   V+P V   N+L+ A  +         
Sbjct: 147 ELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRD 206

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + N+M   GI  D  T + ++    +   +  + +   E  E G+  D  +Y+ ++  + 
Sbjct: 207 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 266

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    +    + ++M      P  ATF  ++           ALR+   +   G    LV
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
               L+KG C  G L +A  +  ++ + G  PN +TY+ +++ C  +   +   E+ + M
Sbjct: 327 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  G     F   +++  ++K    +EA+   ++ V  GV  +I +YN +++  CK GK+
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 445

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LLD M  QG   +  ++  +I G C+ GN+  A      M       N+  Y+ +
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   K G  + A+++F+ M         FT++++++ LCK  ++  A   L + L+ G 
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565

Query: 420 RILKSAQKAVVDGLRHSG 437
                   ++VDG    G
Sbjct: 566 IPSCMTYNSIVDGFIKEG 583



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/335 (20%), Positives = 125/335 (37%), Gaps = 71/335 (21%)

Query: 126 GKPDEANRVFQDMICG-----DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           G  D +  VF D +       D       FN +LN   +    +NA+  F  +     +P
Sbjct: 124 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 183

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +   NIL+  L +       R ++ EL D                            + 
Sbjct: 184 WVPYMNILLTALVR-------RNMIGELRD----------------------------LY 208

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +G   D F    ++ A +K GR++EA +Y  +    GV+LD  +Y+ +I   CK+
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
                   LL+EM+++G+   + T T +I      GN+  A    E M   G   NL   
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             ++      G +D A+N+F  +                                + G+ 
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKIT-------------------------------EDGLF 357

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             K     +++G  +SG   +A ++ +++++  I 
Sbjct: 358 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 5/362 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK      A+ +  + +  G+ P+V TYN +ID +C F  +     +L  M E  I+PD
Sbjct: 301 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+T+N+LI+ + +   L  +  L DEML   I PD  +YNS+++   +  + D+A  +F 
Sbjct: 361 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 420

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M     +P   TFN +++  C+ +  D  +++ R + + G V    TYN LI G C+  
Sbjct: 421 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 476

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A+ + +E+   G  P+ IT   ++     N K +  LE+   ++      D   Y 
Sbjct: 477 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 536

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K  ++ EA D    +   GV+ D+ +YN +I+ +C +  +  A +L  +M+  
Sbjct: 537 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 596

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E D  T+  LI G  KAG I  +   +  M   GF  +      + D L  DG++D +
Sbjct: 597 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 655

Query: 377 IN 378
            +
Sbjct: 656 FS 657



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 8/406 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   R+ +A A++   +  G+  DVVTY  +++  C+     +   +L++M 
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  I PDVV Y+++I    ++   S +  L  EMLE GI P+V++YN ++      G+  
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DMI  ++ P   TFN +++   K      A ++   +      P+ VTYN +I
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 403

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK  R   A    K + D   +P+ +T+ TI+    R ++   G+++L  + R+G  
Sbjct: 404 YGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F ++  L  A D  ++M++ GV  D ++ N L+  +C+  KLE A  L
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 519

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + ++    + D   + I+I G+CK   +  A      +   G + +++ YN ++     
Sbjct: 520 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 579

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              I  A  +F  M+      D+ TY++++    KA  +  + +L+
Sbjct: 580 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 625



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 209/438 (47%), Gaps = 18/438 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA-----GY-- 62
            NI +  FC  ++L  + +      +LG  PDVVT+N L+   C            GY  
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 63  ---TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
              ++ ++M E G++P V+T+N+LI G      +  +  L+++M+  G+  DV +Y +++
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           + + ++G    A  +   M    + P    ++ +++ LCK+ +  +A  +F  + + G  
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P + TYN +I G C  GR   A+ +L+++ +    P+ +T+  ++    +  K     ++
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  +    D   Y ++I  F K  R  +A    + M +     D+V++NT+I++YC+
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCR 439

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
             +++    LL E+ ++G   +  T+  LI G C+  N+  A+   + M   G   +   
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
            N ++    ++ K++ A+ +FE +++     D+  Y+ ++H +CK  ++  A  L  S  
Sbjct: 500 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 559

Query: 416 KSGVRILKSAQKAVVDGL 433
             GV         ++ G 
Sbjct: 560 IHGVEPDVQTYNVMISGF 577



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 189/423 (44%), Gaps = 18/423 (4%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N +I  + +    D   ++  +M    I  ++ ++N LI        LS SL    ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 106 MGIPPDVWSYNSLMH----------CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +G  PDV ++N+L+H           L   G   E   +F  M+   LTP   TFN ++N
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC       A  +   +   G   ++VTY  ++ G+CK G  ++A  +L ++ ++   P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + Y+ I+    ++  +     + S M  KG   + F Y  +I  F   GR  +A   +
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M+   +  D++++N LI+   KEGKL  A  L DEM  +    D  T+  +I G CK 
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
                A+   + M       ++  +N I+D   +  ++D  + +   +     V ++ TY
Sbjct: 410 NRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           ++++H  C+   L +A  L    +  GV         ++ G   +    EA ++   I+M
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525

Query: 452 AKI 454
           +KI
Sbjct: 526 SKI 528



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 174/413 (42%), Gaps = 16/413 (3%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           F S D      + M  +      V  N +I    R +    ++ L  +M    IP +++S
Sbjct: 84  FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL------- 167
           +N L+ C     K   +   F  +      P   TFN +L+GLC       AL       
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 168 ---RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
               +F  + + G  P ++T+N LI GLC  GR+  A  ++ ++   G   + +TY TI+
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +    K  L +LS M+      D   Y  +I    K G   +A     +M+  G+ 
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARL 343
            ++ +YN +I+ +C  G+   A  LL +M ++    D  T   LI    K G + +  +L
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKR 403
             E +++  F   +  YN ++    K  + D A ++F+ M   D  T+++++   C+AKR
Sbjct: 384 CDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 442

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           +    +LL    + G+     A     + L H  C  +       +    ISH
Sbjct: 443 VDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 491



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 109/210 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +C+A R+++   ++ +  R G++ +  TYN LI  +C+  + +A   +   M 
Sbjct: 430 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD +T N L+ G   N  L  +L+L + +    I  D  +YN ++H + +  K D
Sbjct: 490 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 549

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  +    + P   T+N+M++G C      +A  +F  ++ +G  P+  TYN LI
Sbjct: 550 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 609

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +G  KAG +  +  ++ E+  +G + +A T
Sbjct: 610 RGCLKAGEIDKSIELISEMRSNGFSGDAFT 639


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 216/433 (49%), Gaps = 39/433 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + E+AE ++ + IR    P+ VT+   I A+CQ    D    +L +M + G +PD
Sbjct: 226 LCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPD 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ Y++L+ G + +  +  +L LL+ ML     P+   YN+ +  L   G+ +E   +  
Sbjct: 286 VIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIA 342

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P  ATF+ ++N LC+NR  + A+ +   +QK+G++P++V+YN +I       
Sbjct: 343 EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQA 402

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +LK +      P+ I++  ++KC  + +++   +E+++ M +K    +   + 
Sbjct: 403 RADDALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFN 459

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I +  + G++K+A +  E M       DIV+Y++LIN + ++G  E A+ L   M  +
Sbjct: 460 ILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 519

Query: 317 G------------------------------FEC--DKYTHTILIDGLCKAGNIKGARLH 344
                                           +C  ++ T  ILI  LC+ G +  A   
Sbjct: 520 ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDV 579

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKR 403
            E M K G   ++  YN +++   + G++D A+    +M  + D+ +Y+S++  LC+A+R
Sbjct: 580 YEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAER 639

Query: 404 LPSASKLLLSCLK 416
              A KL+   L+
Sbjct: 640 WKDAEKLVTEMLR 652



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 190/436 (43%), Gaps = 68/436 (15%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS--- 96
           P V++ N+LI   C          +L  ++ +G + D V++N+L+AG  R+  L  +   
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 97  ----------------------------LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
                                        D L  +  M + PD ++YN+++  L    + 
Sbjct: 173 VEAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPVAPDTYTYNTVLKGLCCAKQW 232

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  + ++MI     P   TF   +   C+N   D A+ +   + K+G  P+++ Y+ L
Sbjct: 233 EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 292

Query: 189 I--------------------------------KGLCKAGRLRTARWILKELGDSGHAPN 216
           +                                KGLC AGR      ++ E+      PN
Sbjct: 293 VNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPN 352

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T++T++    +NR  +  +E+L  M++ GY  D   Y T+I+ F    R  +A   ++
Sbjct: 353 DATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLK 412

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+    + D +S+N ++   CK  +   A  L+ +M K+    ++ T  ILID LC+ G
Sbjct: 413 SML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNG 469

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMV 395
            +K A    E M K     ++  Y+ +++   + G  + A ++F SM  + D F+Y++ +
Sbjct: 470 QVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATL 529

Query: 396 HNLCKAKRLPSASKLL 411
             LC A R   A +L+
Sbjct: 530 KGLCMAARWDDAGELI 545



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 173/351 (49%), Gaps = 10/351 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + +T   N  +   C A R E+   +I + +R    P+  T++ LI++ CQ    + 
Sbjct: 312 MLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEY 371

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L +M++ G  PDVV+YN++I+  +  +    +L LL  ML     PD  S+N+++ 
Sbjct: 372 AVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLK 428

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           CL +  +  +A  +   M+  D      TFNI+++ LC+N    +A+ +F  + K+  +P
Sbjct: 429 CLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMP 488

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++VTY+ LI G  + G    A  + + +       +  +Y   +K      ++    E++
Sbjct: 489 DIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELI 545

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +    +   +  +I++  + G +  A D  EQM   G+  DI +YN LIN Y ++
Sbjct: 546 ADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQ 605

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK 350
           G+L+ A   L  M     E D  ++  ++ GLC+A   K A +L  E + K
Sbjct: 606 GRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRK 653



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 6/264 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  K  T   N  +   CKA R   A  ++   ++     + +T+N+LID+ CQ      
Sbjct: 414 MLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKD 473

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +   M +    PD+VTY+SLI G +   L   + DL   M       D++SYN+ + 
Sbjct: 474 AIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLK 530

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L    + D+A  +  DM+  D  P   TFNI+++ LC+    + A+ ++  + K+G  P
Sbjct: 531 GLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITP 590

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++ TYN LI G  + GRL  A   LK L      P+ I+Y +I+K   R  ++K   +++
Sbjct: 591 DIFTYNALINGYSEQGRLDDA---LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLV 647

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVK 264
           + M RK  T +   +      F+K
Sbjct: 648 TEMLRKNCTPNEVTFKYANQLFIK 671



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 73/369 (19%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF-------------------------- 178
           P   + NI++  LC  R   +A R+   L+  G                           
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAADAVSHNTLVAGYCRDGSLGDAERVV 173

Query: 179 -------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFR 229
                     +VTY  LI G C++GRL  A   L+ +     AP+  TY T++K  CC  
Sbjct: 174 EAARASGTANVVTYTALIDGYCRSGRLADA---LRLIASMPVAPDTYTYNTVLKGLCC-- 228

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            ++++   E++  M R     +   + T I AF + G L  A + +EQM   G   D++ 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 290 YNTLINLYCKEGKLEAAYLLLD--------------------------------EMEKQG 317
           Y+TL+N + + G+++ A  LL+                                EM ++ 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKD 348

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              +  T + LI+ LC+   ++ A   LE M K G+  ++ +YN I+       + D A+
Sbjct: 349 CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDAL 408

Query: 378 NVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
            + +SM  K D+ ++++++  LCKAKR   A +L+   LK   RI +     ++D L  +
Sbjct: 409 KLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQN 468

Query: 437 GCRREAKKI 445
           G  ++A ++
Sbjct: 469 GQVKDAIEV 477


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 189/403 (46%), Gaps = 35/403 (8%)

Query: 13  CVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ------------------ 54
           C+C   K   +EKA+A+    I  G++P    Y  LI+ YC+                  
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 55  -FVS----------------FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
             +S                 D  Y I+  M  +G  P+VV Y +LI    +NS    ++
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +L EM E GI PD++ YNSL+  L +  + DEA     +M+   L P   T+   ++G 
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            +     +A +  + +++ G +P  V    LI   CK  ++  A    + + D G   +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TYT +M   F+N K     EI   M+ KG   D F Y  +I  F K+G +++A+   ++
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV +G+  +++ YN L+  +C+ G++E A  LLDEM  +G   +  T+  +IDG CK+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  A    + M   G   +   Y  +VD   +   ++ AI +F
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 50/449 (11%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C +  L+ A  I+ + I  G  P+VV Y  LI  + Q   F     +L  M+E GI+PD+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
             YNSLI G ++   +  +   L EM+E G+ P+ ++Y + +    +  +   A++  ++
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547

Query: 138 M-ICGDLT--------------------PCTA--------------TFNIMLNGLCKNRY 162
           M  CG L                      C+A              T+ +++NGL KN  
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D+A  +FR ++  G  P++ +Y +LI G  K G ++ A  I  E+ + G  PN I Y  
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R+ + +   E+L  M  KG   +   YCT+I  + K G L EA    ++M   G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  D   Y TL++  C+   +E A  +     K+G          LI+ + K G      
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGK---TE 783

Query: 343 LHLEYMNKI---GFD----SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           L  E +N++    FD     N   YN ++D L K+G ++ A  +F  M+    +    TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +S+++   K  R      +    + +G+ 
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 194/413 (46%), Gaps = 4/413 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P   TY++LID  C+    +   ++L  M   G+S D  TY+ LI G  +      +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L+ EM+  GI    + Y+  +  + + G  ++A  +F  MI   L P    +  ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+ +       +   ++K   V    TY  ++KG+C +G L  A  I+KE+  SG  PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + YTT++K   +N ++   + +L  MK +G   D F Y ++I    K  R+ EA  ++ 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV +G++ +  +Y   I+ Y +  +  +A   + EM + G   +K   T LI+  CK  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A      M   G   + + Y  +++ L K+ K+D A  +F  M  K    D F+Y 
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +++   K   +  AS +    ++ G+         ++ G   SG   +AK++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 203/471 (43%), Gaps = 74/471 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  RLE A++++++   LGV  D  TY++LID   +  + DA   +++ M  
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340

Query: 71  AGIS-----------------------------------PDVVTYNSLIAGATRNSLLSC 95
            GI+                                   P    Y SLI G  R   +  
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
             +LL EM +  I    ++Y +++  +   G  D A  + ++MI     P    +  ++ 
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              +N    +A+R+ + +++ G  P++  YN LI GL KA R+  AR  L E+ ++G  P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520

Query: 216 NAITYTTI-------------------MKCC--FRNRKYKLGL-----------EILSA- 242
           NA TY                      M+ C    N+    GL           E  SA 
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAY 580

Query: 243 --MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +G   D   Y  ++    K  ++ +A +   +M   G+  D+ SY  LIN + K 
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G ++ A  + DEM ++G   +   + +L+ G C++G I+ A+  L+ M+  G   N   Y
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
             I+D   K G +  A  +F+ M++K    DSF Y+++V   C+   +  A
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 163/344 (47%), Gaps = 10/344 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K ++++ AE I  +    G+ PDV +Y +LI+ + +  +     +I + M E G++P+V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN L+ G  R+  +  + +LLDEM   G+ P+  +Y +++    + G   EA R+F +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P +  +  +++G C+    + A+ +F G  K G       +N LI  + K G+ 
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782

Query: 199 RTARWILKELGDSGH----APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
                +L  L D        PN +TY  ++    +    +   E+   M+          
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++  + K+GR  E     ++ +  G++ D + Y+ +IN + KEG    A +L+D+M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 315 KQ-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            +     G +    T   L+ G  K G ++ A   +E M ++ +
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 184/426 (43%), Gaps = 32/426 (7%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G   D V + +L D Y      +    + +      + P +     L+    R + L  
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLM--HCL---FQLGKPD--EANRVFQDMICGDLTPCTA 148
             D+   M+E  +  DV +Y+ L+  HC     QLGK    +  + F+          TA
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR----------TA 254

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T N+           D AL++   +   G VP   TY++LI GLCK  RL  A+ +L E+
Sbjct: 255 TLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G + +  TY+ ++    + R       ++  M   G     + Y   I    K G +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A    + M+  G+     +Y +LI  YC+E  +   Y LL EM+K+      YT+  +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           + G+C +G++ GA   ++ M   G   N+  Y  ++    ++ +   A+ V + M+    
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D F Y+S++  L KAKR+  A   L+  +++G++       A + G   +     A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543

Query: 445 IQSKIR 450
              ++R
Sbjct: 544 YVKEMR 549



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 43/330 (13%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +  F K   ++KA +I  + +  G+ P+V+ YNML+  +C+    +    +L+ M   
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY---------------- 115
           G+ P+ VTY ++I G  ++  L+ +  L DEM   G+ PD + Y                
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 116 ------------------NSLMHCLFQLGKPDEANRVFQDMICGDL----TPCTATFNIM 153
                             N+L++ +F+ GK +    V   ++ G       P   T+NIM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ LCK    + A  +F  +Q    +P ++TY  L+ G  K GR      +  E   +G 
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG----FGYC-TVIAAFVKIGRL 268
            P+ I Y+ I+    +       L ++  M  K    DG       C  +++ F K+G +
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + A   ME MV      D  +   LIN  C
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/453 (21%), Positives = 198/453 (43%), Gaps = 25/453 (5%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           +E+A  +    + L ++P +    +L+DA  ++   D  + +   M E  +  DV TY+ 
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226

Query: 83  LIAGATRNSLLSCSLDLL---------------------DEMLEMGIPPDVWSYNSLMHC 121
           LI    R   +    D+L                     + M+  G+ P  ++Y+ L+  
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L ++ + ++A  +  +M    ++    T++++++GL K R  D A  +   +  HG   +
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              Y+  I  + K G +  A+ +   +  SG  P A  Y ++++   R +  + G E+L 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            MK++      + Y TV+      G L  A + +++M+  G + ++V Y TLI  + +  
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +   A  +L EM++QG   D + +  LI GL KA  +  AR  L  M + G   N   Y 
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
             +    +  +   A    + M     + +    + +++  CK +++  A     S +  
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQ 586

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           G+         +++GL  +    +A++I  ++R
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTYN++ID  C+  + +A   + ++M+ A + P V+TY SL+ G  +    +    +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-----CTATFNIML 154
            DE +  GI PD   Y+ +++   + G   +A  +   M   +          +T   +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           +G  K    + A ++   + +  ++P+  T   LI   C +   R 
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRV 968



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           FGK +    NI +   CK   LE A+ +        ++P V+TY  L++ Y +       
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-----VWSYN 116
           + + +    AGI PD + Y+ +I    +  + + +L L+D+M       D     + +  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L+    ++G+ + A +V ++M+     P +AT   ++N  C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 167/321 (52%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +   CKA  +  A  +    +   + PDV TYN LI  +      +    + N+M
Sbjct: 203 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKM 262

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           ++  I+P+V T+N L+ G  +   ++ +  +L  M++  I PDV +YNSLM     + K 
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +F  M  G +      +  M+NG CK +  D A+ +F  ++    +P +VTY+ L
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK GR+  A  ++ E+ D G  PN +TY++I+    +N      + +L+ +K +G 
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  +I    + GRL++A +  E ++  G  LD+ +Y  +I  +C +G  + A  
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502

Query: 309 LLDEMEKQGFECDKYTHTILI 329
           LL +ME  G   +  T+ ++I
Sbjct: 503 LLSKMEDNGCIPNAKTYELVI 523



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 167/342 (48%), Gaps = 4/342 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P    +N +++   +    S +L L  +M   GI  D +++N L++C  QLG    +  
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  ++     P   TFN ++ GLC   +   AL     +   GF  + V+Y  LI GLC
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR+  A  +LK +      PNA+ Y  I+    + +      ++ S M  K    D F
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I+ F  + +L  A D   +M  + +  ++ ++N L++ +CKEGK+  A ++L  M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K   + D  T+  L+DG C    +  A+   + M   G  +N++ Y  +V+   K   +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           D AIN+FE M     + +  TYSS++  LCK  R+  A KL+
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 201/418 (48%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D  T+N+LI+ + Q       ++I  ++ + G  P  +T+N+LI G      +  +
Sbjct: 91  GIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQA 150

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   D  SY +L++ L ++G+   A ++ + +    + P    +N++++ 
Sbjct: 151 LHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDN 210

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK +  ++A  ++  +      P++ TYN LI G     +L  A  +  ++      PN
Sbjct: 211 MCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPN 270

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    +  K      +L+ M +     D   Y +++  +  I ++ +A D  +
Sbjct: 271 VYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFD 330

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M + GV  ++  Y T++N +CK   ++ A  L +EM  +    +  T++ LIDGLCK G
Sbjct: 331 SMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLG 390

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A   ++ M+  G   N+  Y+ I+D L K+  +D AI +  +++ +    D +TY+
Sbjct: 391 RIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYT 450

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++  LC++ RL  A  +    L  G  +   A   ++ G    G   +A  + SK+ 
Sbjct: 451 ILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 186/410 (45%), Gaps = 4/410 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    +N ++ +  +        ++  +M   GI  D  T+N LI   ++  L S S  +
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             ++L+ G  P   ++N+L+  L   G   +A      ++         ++  ++NGLCK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 AL++ + +      P  V YN++I  +CKA  +  A  +  ++      P+  T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++       K    +++ + MK++    + + +  ++  F K G++ +A   +  M+
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            D ++ D+V+YN+L++ YC   K+  A  + D M   G   +   +T +++G CK   + 
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMV 395
            A    E M       N+  Y+ ++D L K G+I +A+ + + M    +  +  TYSS++
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             LCK   +  A  LL +    G+R        ++ GL  SG   +A+ +
Sbjct: 419 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 141/274 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V  FCK  ++  A+ ++   ++  + PDVVTYN L+D YC     +    I + M 
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  +V  Y +++ G  +  ++  +++L +EM    I P+V +Y+SL+  L +LG+  
Sbjct: 334 SGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIF 393

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++  +M      P   T++ +L+ LCKN + D A+ +   L+  G  P++ TY ILI
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC++GRL  A+ + ++L   G+  +   YT +++       +   L +LS M+  G  
Sbjct: 454 KGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCI 513

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y  VI +  +      A   + +M+  G+
Sbjct: 514 PNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 151/307 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F   ++L  A  +     +  + P+V T+N+L+D +C+    +    +L  M +
Sbjct: 240 NALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I PDVVTYNSL+ G    + ++ + D+ D M   G+  +V  Y ++++   ++   DE
Sbjct: 300 DDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDE 359

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M C  + P   T++ +++GLCK      AL++   +   G  P +VTY+ ++ 
Sbjct: 360 AINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILD 419

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK   +  A  +L  L D G  P+  TYT ++K   ++ + +    +   +  KGY  
Sbjct: 420 ALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNL 479

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y  +I  F   G   +A   + +M  +G   +  +Y  +I    ++ + + A  LL
Sbjct: 480 DVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLL 539

Query: 311 DEMEKQG 317
            EM  +G
Sbjct: 540 REMIVRG 546


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 194/414 (46%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G+  +V T N+LI+++C     +  +++L ++ + G  PD  ++ +LI G      +  
Sbjct: 103 FGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGE 162

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M+  G  PDV  Y +L++ L + G    A R+ + M  G+  P    +  +++
Sbjct: 163 ALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIH 222

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK+R    A  +F  +   G  P +VT N L+  LC  G  +    +L E+ DS   P
Sbjct: 223 SLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP 282

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           NAI+ TT++    +        +++  M + G   D   Y  +I        + EA    
Sbjct: 283 NAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVF 342

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV  G   ++ SYNTLIN YCK  +++ A  L +EM +Q    +  T+  LI GLC  
Sbjct: 343 DMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHV 402

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++ A      M   G   +L  Y  ++D L K+  +D A+ + +++E      D   Y
Sbjct: 403 GRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIY 462

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + ++  +C+A  L  A  L  +    G++        +  GL   G   EA K+
Sbjct: 463 TIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 201/408 (49%), Gaps = 6/408 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ + +FC  NR+  A +++   ++LG  PD  ++  LI   C          + ++M 
Sbjct: 112 LNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI 171

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDVV Y +LI G  +    S ++ LL  M +    PDV  Y +L+H L +  +  
Sbjct: 172 WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F +MI   ++P   T N ++  LC      +   +   +     +P  ++   ++
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGY 248
             LCK G +  A  ++  +  SG  P+ +TYT ++   C R+   +  +++   M  KG 
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDE-AVKVFDMMVHKGC 350

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + F Y T+I  + KI R+ +A    E+M    +  + V+YNTLI+  C  G+L+ A  
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM   G   D  T+ IL+D LCK  ++  A   L+ +     D +++ Y  ++D + 
Sbjct: 411 LFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC 470

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           + G+++ A ++F ++  K    + +TY+ M H LCK   L  A+KL +
Sbjct: 471 RAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 199/444 (44%), Gaps = 5/444 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   ++ +A  +    I  G  PDVV Y  LI+  C+     A   +L  M +    PD
Sbjct: 154 LCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPD 213

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y +LI    ++   + + +L  EM+  GI P++ + NSL++ L  LG+    N +  
Sbjct: 214 VVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLN 273

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   +   +++ LCK      A  +   + + G  P++VTY  LI G C   
Sbjct: 274 EMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRS 333

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +   +   G APN  +Y T++    +  +    + +   M R+    +   Y 
Sbjct: 334 EMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYN 393

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I     +GRL++A     +MV  G   D+V+Y  L++  CK   L+ A  LL  +E  
Sbjct: 394 TLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGS 453

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + D   +TI+IDG+C+AG ++ AR     ++  G   N+  YN +   L K G +D A
Sbjct: 454 NLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEA 513

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +F  M+      D  TY+++     +      A +LL   L  G     S    +V  
Sbjct: 514 TKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGM 573

Query: 433 LRHSGC-RREAKKIQSKIRMAKIS 455
           L   G  + EA K++      +I 
Sbjct: 574 LSDDGLDQSEAHKLEDMFPHLRIQ 597



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 187/378 (49%), Gaps = 9/378 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  +  +A  +  + I  G+ P++VT N L+ A C    +    T+LN M ++ I P
Sbjct: 223 SLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP 282

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           + ++  +++    +  +++ + D++D M + G+ PDV +Y +L+  HCL    + DEA +
Sbjct: 283 NAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL--RSEMDEAVK 340

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF  M+     P   ++N ++NG CK    D A+ +F  + +   +P  VTYN LI GLC
Sbjct: 341 VFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             GRL+ A  + +E+   G  P+ +TY  ++    +N      + +L A++      D  
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQ 460

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI    + G L++A D    + + G++ ++ +YN + +  CK G L+ A  L  EM
Sbjct: 461 IYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM 520

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           ++     D  T+  +  G  +      A   LE M   GF  ++     +V  L  DG +
Sbjct: 521 DENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG-L 579

Query: 374 DHAINVFESMEVKDSFTY 391
           D +    E+ +++D F +
Sbjct: 580 DQS----EAHKLEDMFPH 593



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 176/378 (46%), Gaps = 4/378 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N     Y  F + D   +  NRM      P +V +  ++   T+    S  L L  +M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             GIP +V++ N L++    L + + A  V   ++     P TA+F  ++ GLC      
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            AL +F  +   GF P++V Y  LI GLCK G    A  +L+ +      P+ + Y T++
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               ++R+      + S M  KG + +     +++ A   +G  K     + +MV   + 
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            + +S  T+++  CKEG +  A+ ++D M + G E D  T+T LIDG C    +  A   
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
            + M   G   N+ +YN +++   K  ++D A+ +FE M     + ++ TY++++H LC 
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401

Query: 401 AKRLPSASKLLLSCLKSG 418
             RL  A  L    +  G
Sbjct: 402 VGRLQDAIALFREMVACG 419



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 169/338 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C     +    ++ + +   ++P+ ++   ++DA C+       + +++ M +
Sbjct: 253 NSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQ 312

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+ PDVVTY +LI G    S +  ++ + D M+  G  P+V+SYN+L++   ++ + D+
Sbjct: 313 SGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDK 372

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M    L P T T+N +++GLC      +A+ +FR +   G +P+LVTY IL+ 
Sbjct: 373 AMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLD 432

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK   L  A  +LK +  S   P+   YT ++    R  + +   ++ S +  KG   
Sbjct: 433 YLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKP 492

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + Y  +     K G L EAT    +M  +    D  +YNT+   + +  +   A  LL
Sbjct: 493 NVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLL 552

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +EM  +GF CD  T T+L+  L   G  +     LE M
Sbjct: 553 EEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 201/433 (46%), Gaps = 4/433 (0%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           N L+ A +     + +   P +V +  ++ +  +   +    ++  +M   GI  +V T 
Sbjct: 53  NTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           N LI      + ++ +  +L ++L++G  PD  S+ +L+  L   G+  EA  +F  MI 
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P    +  ++NGLCK  +T  A+R+ R ++K    P++V Y  LI  LCK  +   
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ 232

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +  E+   G +PN +T  +++       ++K    +L+ M       +     TV+ 
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           A  K G + +A D ++ M   GV+ D+V+Y  LI+ +C   +++ A  + D M  +G   
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAP 352

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           + +++  LI+G CK   +  A    E M +     N   YN ++  L   G++  AI +F
Sbjct: 353 NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALF 412

Query: 381 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
             M    ++ D  TY  ++  LCK   L  A  LL +   S +         V+DG+  +
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472

Query: 437 GCRREAKKIQSKI 449
           G   +A+ + S +
Sbjct: 473 GELEDARDLFSNL 485



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   C   RL+ A A+  + +  G +PD+VTY +L+D  C+    D    +L
Sbjct: 388 NTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALL 447

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             +  + + PD+  Y  +I G  R   L  + DL   +   G+ P+VW+YN + H L + 
Sbjct: 448 KAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKR 507

Query: 126 GKPDEANRVFQDMICGDLTPCTA---TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           G  DEA ++F +M   D   C+A   T+N +  G  +N  T  A+++   +   GF  ++
Sbjct: 508 GLLDEATKLFMEM---DENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDV 564

Query: 183 VTYNILIKGLCKAG 196
            T  +L+  L   G
Sbjct: 565 STTTLLVGMLSDDG 578



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 59/131 (45%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++  I +   C+A  LE A  +  +    G+ P+V TYN++    C+    D    +   
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E   S D  TYN++  G  RN+  S ++ LL+EML  G   DV +   L+  L   G 
Sbjct: 520 MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579

Query: 128 PDEANRVFQDM 138
                   +DM
Sbjct: 580 DQSEAHKLEDM 590


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 181/380 (47%), Gaps = 35/380 (9%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LPDV TYN LI  +CQ         + +RM++AG+ P + TYNSL+ G  +   +  ++ 
Sbjct: 398 LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVK 457

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L  EM   G  P+V +Y +LM         D A  +  +M    ++    T+N+++NG+C
Sbjct: 458 LYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC 517

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                     M +     GF+P ++TYN +I G  KAG + +A  + +++ + G  PN I
Sbjct: 518 MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR----------- 267
           TYT+ +    R     + L++L+ ++R+G   D   Y  +I  F + G            
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637

Query: 268 ------------------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                                   +KE + + E M+  G+  D  +Y TLI+ + K+G +
Sbjct: 638 LKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNV 697

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L  EM  +G+  D +T T L  GLC++G+I GA+  LE M ++    N+  YN +
Sbjct: 698 AFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNML 757

Query: 364 VDRLGKDGKIDHAINVFESM 383
           ++   +D K+  A  + + M
Sbjct: 758 INGYLRDCKLQEAFRLHDEM 777



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 201/444 (45%), Gaps = 42/444 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C    +  A  +  + ++ G++P  V Y +LI    Q       Y +  +M   G+ P 
Sbjct: 307 YCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPS 366

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               + ++ G   +     ++ L +EM + G+ PDV++YN+L+H   Q  K  EA  +F 
Sbjct: 367 TFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFD 425

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+N +L G CK    D A++++  +   GF P +VTY  L++G     
Sbjct: 426 RMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKK 485

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
               A  +L E+  +G + N  TY  ++   C  +R  ++   +L +   +G+      Y
Sbjct: 486 DFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVD-GMLKSFMSEGFIPTMMTY 544

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  FVK G +  A    +QM   G+  +I++Y + I+ YC+ G  + A  +L+++ +
Sbjct: 545 NSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR 604

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHL------------------------------ 345
           +G + D   +  LI+G C+ GN+  A   L                              
Sbjct: 605 RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKE 664

Query: 346 -----EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
                E M K G  ++   Y  ++D   KDG +  A+ ++  M  K    D+FT++++ H
Sbjct: 665 VSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTH 724

Query: 397 NLCKAKRLPSASKLLLSCLKSGVR 420
            LC++  +  A KLL    +  VR
Sbjct: 725 GLCRSGDIDGAKKLLEEMRRLDVR 748



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 202/444 (45%), Gaps = 6/444 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V    K  R+E+A  +  +    G   DV+    L+  YC          +     + GI
Sbjct: 269 VDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGI 328

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P  V Y  LI G  +  +   + +L  +M   G+ P  +  + ++  L    +  +A  
Sbjct: 329 VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVC 388

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F++M    L P   T+N +++  C+      AL +F  ++K G  P + TYN L+ G C
Sbjct: 389 LFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYC 447

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G +  A  +  E+   G  PN +TY T+M+     + +     +L  MK+ G + + +
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDY 507

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I     + R+ E    ++  +++G    +++YN++IN + K G + +A+ +  +M
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G   +  T+T  IDG C+ G    A   L  + + G   ++ AYN +++   ++G +
Sbjct: 568 REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNM 627

Query: 374 DHAIN----VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
            HA+     + +     ++  Y+S++        +   SK   S +K G+    S    +
Sbjct: 628 SHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTL 687

Query: 430 VDGLRHSGCRREAKKIQSKIRMAK 453
           +DG    G    A ++ S++ MAK
Sbjct: 688 IDGFSKDGNVAFALELYSEM-MAK 710



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 159/361 (44%), Gaps = 35/361 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N  +  +CK   +++A  +  +    G  P+VVTY  L+  Y     FD  Y 
Sbjct: 433 KPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYA 492

Query: 64  ILNRMREAGIS-----------------------------------PDVVTYNSLIAGAT 88
           +L+ M++ G+S                                   P ++TYNS+I G  
Sbjct: 493 LLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFV 552

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           +  ++  +  +  +M E G+PP++ +Y S +    + G  D A ++  D+    L P   
Sbjct: 553 KAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIV 612

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +N ++NG C+     +AL++   L K G  P  V YN LI G      ++      + +
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G   +  TYTT++    ++      LE+ S M  KGY  D F +  +     + G +
Sbjct: 673 IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDI 732

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
             A   +E+M    V+ ++  YN LIN Y ++ KL+ A+ L DEM   G + D  T+ IL
Sbjct: 733 DGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDIL 792

Query: 329 I 329
           +
Sbjct: 793 V 793



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 191/475 (40%), Gaps = 75/475 (15%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV+PD+ +   L+    +  S      +   MR  G   D   +++L++   +  +   +
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN- 155
           + L DEM    I PD   Y   +  L +LG    A R+ ++M       C  T+  M++ 
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271

Query: 156 ----------------------------------GLCKNRYTDNALRMFRGLQKHGFVPE 181
                                             G C  +   NAL +F+   K G VP 
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331

Query: 182 LVTYNILIKG------------LCKA------------------GRLRTARW-----ILK 206
            V Y +LI+G            LC+                   G L   RW     + +
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFE 391

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+ DSG  P+  TY  ++    +  K +  L +   MK+ G       Y +++  + K G
Sbjct: 392 EMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
            + EA     +M  +G + ++V+Y TL+  Y  +   + AY LLDEM++ G  C+ YT+ 
Sbjct: 451 CMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYN 510

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           +LI+G+C    +      L+     GF   +  YN I++   K G +  A  V++ M  K
Sbjct: 511 VLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREK 570

Query: 387 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
               +  TY+S +   C+      A K+L    + G++    A  A+++G    G
Sbjct: 571 GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEG 625



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 142/285 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C  +R+ + + ++   +  G +P ++TYN +I+ + +     + +T+  +MRE
Sbjct: 510 NVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE 569

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+++TY S I G  R      +L +L+++   G+ PD+ +YN+L++   Q G    
Sbjct: 570 KGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSH 629

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   ++   L P T  +N ++ G           + +  + K G V +  TY  LI 
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLID 689

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G +  A  +  E+   G+ P+A T+T +     R+       ++L  M+R     
Sbjct: 690 GFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP 749

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           + F Y  +I  +++  +L+EA    ++M+  G+Q D  +Y+ L++
Sbjct: 750 NVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 122/314 (38%), Gaps = 38/314 (12%)

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            G VP++ +   L+    +    + A  +  E+   G+  +A  +  +M  C +   ++ 
Sbjct: 151 RGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHED 210

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            + +   M       D   Y   I A  K+G    A   + +M   G      +Y T+++
Sbjct: 211 AVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVD 270

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
           +  K G++E A  + DEM   G + D    T L+ G C    +  A    +   K G   
Sbjct: 271 VLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330

Query: 356 NLEAYNCIV---DRLG--------------------------------KDGKIDHAINVF 380
               Y  ++   D++G                                 D +   A+ +F
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390

Query: 381 ESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           E M    + D FTY++++H  C+A +L  A  L     K+GV+   +   +++ G    G
Sbjct: 391 EEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450

Query: 438 CRREAKKIQSKIRM 451
           C  EA K+ S++ M
Sbjct: 451 CMDEAVKLYSEMPM 464



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 73/150 (48%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T + N  +  +   N +++        I+ G++ D  TY  LID + +  +      + 
Sbjct: 645 NTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELY 704

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   G  PD  T+ +L  G  R+  +  +  LL+EM  + + P+V+ YN L++   + 
Sbjct: 705 SEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRD 764

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            K  EA R+  +M+   + P   T++I+++
Sbjct: 765 CKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 213/439 (48%), Gaps = 7/439 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGISPD 76
           C+A RL+ A A     +R G+  DV+  + L+   C     D    +L +RM E G  PD
Sbjct: 114 CRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPD 173

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRV 134
            ++Y++++     +     +LD+L   ++ G   P +V  Y++++H LF+ GK  EA  +
Sbjct: 174 AISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDL 233

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F +M    + P   T+N +++ LCK R  D A  + R +  +G  P+ VTYN LI G   
Sbjct: 234 FHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYST 293

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G+ + A  + KE+   G  PN +T +T +    ++ + +   E   +M  KG+  +   
Sbjct: 294 LGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIIS 353

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++  +   G L + ++    MV DG+  +   +N L+N Y K G +  A  + ++M+
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           K+G   D  T+  +I   C+ G++  A     +M   G + N   Y C++      G + 
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473

Query: 375 HAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  +   +  K       +++S++++LCK  R+  A ++    +++G +   +   +++
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLI 533

Query: 431 DGLRHSGCRREAKKIQSKI 449
           DG    G   EA ++   +
Sbjct: 534 DGYCLIGKMSEAFRVHDAM 552



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 217/488 (44%), Gaps = 42/488 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA+ I+   +  GV PD VTYN LI  Y     +     +   M  
Sbjct: 250 NSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTS 309

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VT ++ +A   ++  +  + +  D ML  G   ++ SY++L+H     G   +
Sbjct: 310 RGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVD 369

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +F  M+   + P    FNI++NG  K      A+ +F  +QK G  P+++TY  +I 
Sbjct: 370 MSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIH 429

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-------------CCFRNRKYKLGL 237
             C+ G +  A      + D G  PN   Y  +++               +  R   LG 
Sbjct: 430 AFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGP 489

Query: 238 EILS----------------------AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
            ILS                       + R G   D   + ++I  +  IG++ EA    
Sbjct: 490 CILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVH 549

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + MV+ G++ DIV+Y TL+N  CK G+++   +L  E+  +G +   +T+ I++DGL  A
Sbjct: 550 DAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHA 609

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SMEVK-DSFTY 391
           G    A+   + M + G    +  Y+ ++  L ++   + AI VF+   +M VK D    
Sbjct: 610 GRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVIL 669

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS---K 448
           + M+  + KA+R   A  L  S    G+         +++ L   G   EA+ + S   K
Sbjct: 670 NIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLK 729

Query: 449 IRMAKISH 456
             ++  SH
Sbjct: 730 SGLSPTSH 737



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 188/409 (45%), Gaps = 4/409 (0%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           +VV Y+ ++    +         + + M + G+ P+VVTYNS+I    +   +  +  +L
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M+  G+ PD  +YN+L+H    LG+  +A R+F++M    + P T T +  +  LCK+
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              + A   F  +   G    +++Y+ L+ G   AG L     +   +   G  PN   +
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    +    +  + I   M+++G   D   Y  VI AF ++G + +A D    M+ 
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            GV+ +   Y  LI  +C  G L  A  L+ E+  +G      +   LI+ LCK G +  
Sbjct: 450 KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE 509

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 396
           A+   + + + G  +++  +  ++D     GK+  A  V ++M       D  TY ++V+
Sbjct: 510 AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVN 569

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             CK  R+     L    L  GV+        ++DGL H+G    AK++
Sbjct: 570 GCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEM 618



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 161/369 (43%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI V  + K   + +A  I  D  + G+ PDV+TY  +I A+C+  S D      N 
Sbjct: 387 HVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNH 446

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G+ P+   Y  LI G   +  L  + +L+ E+   G+ P + S+ SL++ L + G+
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA R+F  +I          F  +++G C       A R+   +   G  P++VTY  
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G CK GR+     + +EL   G  P   TY  I+   F   +     E+   M   G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  ++    +    +EA    +++    V+ DIV  N +I+   K  + E A 
Sbjct: 627 IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G      T+TI+++ L K G+++ A      M K G        N IV  L
Sbjct: 687 GLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTL 746

Query: 368 GKDGKIDHA 376
            + G+I  A
Sbjct: 747 LEKGEIVKA 755



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 7/300 (2%)

Query: 10  LNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           L  C+ +F       CK  R+ +A+ I    IR G   DV  +  LID YC        +
Sbjct: 487 LGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            + + M   GI PD+VTY +L+ G  +N  +   L L  E+L  G+ P  ++Y  ++  L
Sbjct: 547 RVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGL 606

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           F  G+   A  +FQ+MI   +     T++I+L GLC+N  T+ A+ +F+ L       ++
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V  NI+I  + KA R   A  +   + D G  P   TYT +M+   +    +    + S 
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSV 726

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M + G +        ++   ++ G + +A  YM ++    +  +  + + L++L+  +GK
Sbjct: 727 MLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGK 786



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 134/317 (42%), Gaps = 42/317 (13%)

Query: 168 RMFRGLQKHGFVPELVTYNILI-----------------------------------KGL 192
           RM  G      +P + TY+ILI                                   +GL
Sbjct: 89  RMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGL 148

Query: 193 CKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--T 249
           C A R   A  +L   + + G  P+AI+Y+T++K    + + +  L+IL    ++G    
Sbjct: 149 CDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCP 208

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y TV+    K G++ EA D   +M   GV  ++V+YN++I+  CK   ++ A  +
Sbjct: 209 CNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGI 268

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L +M   G + D  T+  LI G    G  K A    + M   G   N    +  V  L K
Sbjct: 269 LRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCK 328

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I+ A   F+SM  K    +  +YS+++H    A  L   S L    ++ G+   +  
Sbjct: 329 HGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV 388

Query: 426 QKAVVDGLRHSGCRREA 442
              +V+G    G  REA
Sbjct: 389 FNILVNGYAKCGMVREA 405


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 203/415 (48%), Gaps = 10/415 (2%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
            A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++I
Sbjct: 466 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 521

Query: 85  AGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GD 142
           AG      +  +LD++ EM E G I P+ ++Y +++    ++G+ DEA +VF +M+  G+
Sbjct: 522 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 581

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P    +N ++ G C     D AL     + + G    + TYN+L+  L   GR   A 
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 641

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +++E+G  G AP+  TY  ++    +    K  LEI   M R+G       Y  +I A 
Sbjct: 642 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 701

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K G+++E     ++ V  G++ D+V YN LIN +   G ++ A+ ++ EMEK+    D 
Sbjct: 702 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 761

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  L+ GLC  G +  AR  ++ M + G   +L  YN ++      G +  A+ +   
Sbjct: 762 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 821

Query: 383 MEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           M  K       TY++++  LCK  +   A  ++   +++G+    S   ++++GL
Sbjct: 822 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 174/359 (48%), Gaps = 2/359 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  FC   R++ A  I+ +   R G+ P+  TY  +I  +C+    D    + + M 
Sbjct: 518 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 577

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + P+ V YN+LI G      L  +L   D M+E G+   V +YN L+H LF  G+ 
Sbjct: 578 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 637

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  + ++M    L P   T+NI++NG CK      AL +F  + + G    +VTY  L
Sbjct: 638 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 697

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K G+++    +  E    G  P+ + Y  ++     +       EI+  M++K  
Sbjct: 698 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 757

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T++     +GR+ EA   +++M   G+Q D+V+YNTLI+ Y  +G ++ A  
Sbjct: 758 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           + +EM  +GF     T+  LI GLCK G    A   ++ M + G   +   Y  +++ L
Sbjct: 818 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + SL L   M  + +P    S + L+  L        A  +F DM    L  CT TFNIM
Sbjct: 434 ATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIM 489

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  LC       AL + R + +    P  VTYN +I G C  GR++ A  I++E+ + G 
Sbjct: 490 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 545

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 271
            APN  TY T++    +  +    +++   M  KG    +   Y  +I  +   G+L  A
Sbjct: 546 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 605

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             Y ++MV  GV + + +YN L++    +G+   AY L++EM  +G   D +T+ ILI+G
Sbjct: 606 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 665

Query: 332 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 356
            CK GN+K A    E M++ G                           FD         +
Sbjct: 666 HCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPD 725

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           L  YN +++     G ID A  +   ME K    D  TY++++  LC   R+  A KL+ 
Sbjct: 726 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 785

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              + G++        ++ G    G  ++A +I++++
Sbjct: 786 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 145/280 (51%), Gaps = 12/280 (4%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILS 241
            T+NI+++ LC AG+   A  +L+++      PNA+TY T++   C R R  +  L+I+ 
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMR 538

Query: 242 AMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCK 299
            M+ R G   + + Y TVI+ + K+GR+ EA    ++M+T G V+ + V YN LI  YC 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +GKL+ A L  D M ++G      T+ +L+  L   G    A   +E M   G   ++  
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++   K+G +  A+ +FE+M  +       TY+++++ L K  ++    KL    +
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           + G+R       A+++    SG    A +I  ++   +I+
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 83/149 (55%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  + +   +  +++A  I+ +  +  + PD VTYN L+   C     D    +++ M
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 787

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E GI PD+VTYN+LI+G +    +  +L + +EM+  G  P + +YN+L+  L + G+ 
Sbjct: 788 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 847

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGL 157
           D+A  + ++M+   +TP  +T+  ++ GL
Sbjct: 848 DDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 28/52 (53%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           G  P ++TYN LI   C+    D    ++  M E GI+PD  TY SLI G T
Sbjct: 826 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 877


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 223/449 (49%), Gaps = 20/449 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C A + E AEA++ + +R    P+ VT+   I A+CQ    D    +L+
Sbjct: 212 TYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLD 271

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           RM + G +PDVV Y++L+ G +    +  +++LL+ ML     P+   YN+ +  L    
Sbjct: 272 RMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQ 328

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + ++  ++  +M+  D  P  ATF+++ + LC+N   D A+ +   + K+G  P+ V YN
Sbjct: 329 RWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYN 388

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI    + GR+  A   LK L     +P+ I++   +K   R  ++    E++  M R+
Sbjct: 389 TLIYSFSEQGRVDDA---LKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLRE 445

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                   +  +I +  + GR+  A +  EQM   G   DIV+Y++LIN   ++G +E+A
Sbjct: 446 DCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESA 505

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L   M  +    D + +  ++ GLC+A   + A   +  M +     N   +N +++ 
Sbjct: 506 IELFQSMPCKP---DIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINS 562

Query: 367 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGVR 420
           L + G +D AI VFE M       D FTY+++++   +  RL  A +LL  +SC    V 
Sbjct: 563 LCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAV- 621

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               +  + + GL  +   +EA+++ +++
Sbjct: 622 ----SYNSALKGLCRAERWKEAEEVVAEM 646



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 200/434 (46%), Gaps = 41/434 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C   RL  AE ++ D ++     D V++N L+  YC+     A    L     
Sbjct: 116 NILIKKLCAQRRLADAERVL-DALKAAGAADPVSHNTLVAGYCRDGRL-ADAERLLAAAG 173

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              + +VVTY +LI G  R+  L+ +L L+     M + PD ++YN+++  L    + ++
Sbjct: 174 LSGAANVVTYTTLINGYCRSGRLADALALI---ASMPVAPDTYTYNTVLMGLCGARQWED 230

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M+     P   TF   +   C+N   D A+++   + ++G  P++V Y+ L+ 
Sbjct: 231 AEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVN 290

Query: 191 GLCKAGRLRTA---------------------------RW-----ILKELGDSGHAPNAI 218
           G  + GR+  A                           RW     ++ E+      PN  
Sbjct: 291 GFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEA 350

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T++ +  C  +N      +E+L  M + G   D   Y T+I +F + GR+ +A   +  M
Sbjct: 351 TFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM 410

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
                  D++S+N  +   C+  + + A  L+ +M ++     + T  ILID LC+ G +
Sbjct: 411 PCSP---DVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRV 467

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHN 397
             A    E M K G   ++  Y+ +++ L + G ++ AI +F+SM  K D F Y++++  
Sbjct: 468 NNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKG 527

Query: 398 LCKAKRLPSASKLL 411
           LC+A R   A +L+
Sbjct: 528 LCRAARWEDAGELI 541



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 169/341 (49%), Gaps = 9/341 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  K +T   N  +   C A R E    +I++ +R   LP+  T++ML    CQ    D 
Sbjct: 308 MLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDC 367

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L +M + G  PD V YN+LI   +    +  +L LL+ M      PDV S+N+ + 
Sbjct: 368 AMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALK 424

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L +  + D+A  +   M+  D      TFNI+++ LC+N   +NA+ +F  + K+G  P
Sbjct: 425 GLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTP 484

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++VTY+ LI GL + G + +A  + + +      P+   Y  ++K   R  +++   E++
Sbjct: 485 DIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELI 541

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S M RK    +   +  +I +  + G +  A +  EQM   G   DI +YN LIN + ++
Sbjct: 542 SNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQ 601

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+L+ A  LL  M  +    D  ++   + GLC+A   K A
Sbjct: 602 GRLDDARRLLSTMSCKP---DAVSYNSALKGLCRAERWKEA 639



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 125/229 (54%), Gaps = 6/229 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A R + AE +I+  +R       +T+N+LID+ CQ    +    +  +M + G +PD
Sbjct: 426 LCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPD 485

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY+SLI G +   L+  +++L   M      PD++ YN+++  L +  + ++A  +  
Sbjct: 486 IVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELIS 542

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   D  P   TFNI++N LC+    D A+ +F  + K+G  P++ TYN LI G  + G
Sbjct: 543 NMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQG 602

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           RL  AR +L  +      P+A++Y + +K   R  ++K   E+++ M R
Sbjct: 603 RLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLR 648



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 65/351 (18%)

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL------------ 198
           NI++  LC  R   +A R+   L+  G   + V++N L+ G C+ GRL            
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAAAGL 174

Query: 199 -----------------RTARW--ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
                            R+ R    L  +     AP+  TY T++      R+++    +
Sbjct: 175 SGAANVVTYTTLINGYCRSGRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDAEAL 234

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           ++ M R     +   + T I AF + G L  A   +++M   G   D+V Y+TL+N + +
Sbjct: 235 MAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSE 294

Query: 300 EGKLEAAYLLLD--------------------------------EMEKQGFECDKYTHTI 327
           +G+++ A  LL+                                EM ++    ++ T ++
Sbjct: 295 QGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSM 354

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-K 386
           L   LC+ G +  A   LE M+K G   +   YN ++    + G++D A+ +  SM    
Sbjct: 355 LTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSP 414

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           D  ++++ +  LC+A+R   A +L++  L+    +++     ++D L  +G
Sbjct: 415 DVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNG 465



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 44/234 (18%)

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +V  NILIK LC   RL  A  +L  L  +G A                           
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAA--------------------------- 144

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
                    D   + T++A + + GRL +A + +          ++V+Y TLIN YC+ G
Sbjct: 145 ---------DPVSHNTLVAGYCRDGRLADA-ERLLAAAGLSGAANVVTYTTLINGYCRSG 194

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +L  A  L+  M       D YT+  ++ GLC A   + A   +  M +     N   + 
Sbjct: 195 RLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFA 251

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
             +    ++G +D A+ + + M       D   YS++V+   +  R+  A +LL
Sbjct: 252 TQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELL 305


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 4/412 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL   + +  +  + K+  L  A  +    +  G+ P+VVTY +LI   CQ       + 
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  ++ + G+ P +VTY+SLI G  +   L     L ++M++MG PPDV  Y  L+  L 
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G    A R    M+   +      FN +++G C+    D AL++FR +  +G  P++ 
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+  +++     GRL  A ++   +   G  P+A+ Y T++    ++ K  +GL++   M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +R   + D      VI    K  R+++A+ +   ++   ++ DIV+YNT+I  YC   +L
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  + + ++   F  +  T TILI  LCK  ++ GA      M + G   N   Y C+
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +D   K   I+ +  +FE M+ K       +YS ++  LCK  R+  A+ + 
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 156/319 (48%), Gaps = 2/319 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAII-IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           +L+  + N  +  +C+ NR ++A  +  + GI  G+ PDV T+  ++         +   
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVMRVSIMEGRLEEAL 551

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +  RM + G+ PD + Y +LI    ++   +  L L D M    I  D+   N ++H L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           F+  + ++A++ F ++I G + P   T+N M+ G C  R  D A R+F  L+   F P  
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT  ILI  LCK   +  A  +   + + G  PNA+TY  +M    ++   +   ++   
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+ KG +     Y  +I    K GR+ EAT+   Q +   +  D+V+Y  LI  YCK G+
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791

Query: 303 LEAAYLLLDEMEKQGFECD 321
           L  A LL + M + G + D
Sbjct: 792 LVEAALLYEHMLRNGVKPD 810



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 178/431 (41%), Gaps = 74/431 (17%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            +++E A  ++   +  G  P+VVT+  LI+ +C+    D  + +   M + GI PD++ 
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y++LI G  +  +L     L  + L  G+  DV  ++S +    + G    A+ V++ M+
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
           C                                    G  P +VTY ILIKGLC+ GR+ 
Sbjct: 384 C-----------------------------------QGISPNVVTYTILIKGLCQDGRIY 408

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  +  ++   G  P+ +TY++++    +    + G  +   M + GY  D   Y  ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-------------------- 299
               K G +  A  +  +M+   ++L++V +N+LI+ +C+                    
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 300 ---------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
                          EG+LE A  L   M K G E D   +  LID  CK          
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCK 400
            + M +    +++   N ++  L K  +I+ A     N+ E     D  TY++M+   C 
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648

Query: 401 AKRLPSASKLL 411
            +RL  A ++ 
Sbjct: 649 LRRLDEAERIF 659



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 156/392 (39%), Gaps = 61/392 (15%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI----------------MLNGL 157
           S+ ++ H L + G  D A++VF +MI    T     FN+                ++   
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMI----TNRGKDFNVLGSIRDRSLDADVCKFLMECC 156

Query: 158 CKNRYTDNALRMFRGLQKHGFV-PELVTYNIL---------------IKGLCKAG----R 197
           C+    D AL +F    + G V P+   Y +L                  LC+ G     
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 198 LRTARWILKELGDSGHAPNAITY-TTIMKCCFR------NRKYK--------LGLEILSA 242
           +    ++L  L   G    A+ +   +M+  FR      N+  K        +   +LS 
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +   G   +   +CT+I  F K G +  A D  + M   G++ D+++Y+TLI+ Y K G 
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L   + L  +   +G + D    +  ID   K+G++  A +  + M   G   N+  Y  
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396

Query: 363 IVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           ++  L +DG+I  A  ++       ME     TYSS++   CK   L S   L    +K 
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           G          +VDGL   G    A +   K+
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 195/418 (46%), Gaps = 4/418 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+ P    YN +IDA  +  S D  Y    +M      PD  TYN LI G  R+ ++  
Sbjct: 211 LGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDE 270

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L+ +M  +G  P+V++Y  L+   F   K DEA RV + M    ++P  AT    ++
Sbjct: 271 ALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIH 330

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G+ +    + A  +     +   V + +  + L+  L      R A  +LK+ G  GH P
Sbjct: 331 GVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKP 390

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           ++ T+   M C  +         IL     +G  F    Y  +I A    G++ E   Y 
Sbjct: 391 DSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYF 450

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            QMV DG+  ++ SYN +I+ +CK   ++ A     EM+ +G   +  T   LIDG CK 
Sbjct: 451 NQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKG 510

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G I  +R  L  + + GF  ++  ++ I+D L +  +I+ A+  F  M +     ++ TY
Sbjct: 511 GEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTY 570

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + ++H+LC    +P + KLL      G+     +  A++      G   +AKK+ S +
Sbjct: 571 NILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM 628



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 178/436 (40%), Gaps = 70/436 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C++  +++A  ++     LG  P+V TY +LID +      D  + +L  M+ 
Sbjct: 256 NILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKA 315

Query: 71  AGISPDVVTYNSLIAGATR--------------------------NSLLSC--------- 95
             +SP   T  S I G  R                          ++LL C         
Sbjct: 316 RKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMARE 375

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHC---------------------------------- 121
           +  LL +  ++G  PD  ++N  M+C                                  
Sbjct: 376 AGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIK 435

Query: 122 -LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L+  GK  E N  F  M+   L     ++N++++  CK    D A   F+ +Q  G  P
Sbjct: 436 ALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPP 495

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            LVT+N LI G CK G +  +R +L  L + G  P+  T+++I+    R ++ +  L   
Sbjct: 496 NLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCF 555

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S M   G + +   Y  +I +   IG +  +   + +M TDG+  D+ S+N LI  +C+ 
Sbjct: 556 SEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRM 615

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK+E A  L   M   G   D YT+   I   C++G    A+     M   G   +    
Sbjct: 616 GKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTC 675

Query: 361 NCIVDRLGKDGKIDHA 376
           N I+D L K  + + A
Sbjct: 676 NIILDALVKQDQFEAA 691



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 40/367 (10%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           +AG  +L +  + G  PD  T+N  +    +   L+   ++LD  +E G+     +Y +L
Sbjct: 375 EAG-ALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLAL 433

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +  L+  GK  E N  F  M+   L     ++N++++  CK    D A   F+ +Q  G 
Sbjct: 434 IKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGI 493

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P LVT+N LI G CK G +  +R +L  L + G  P                       
Sbjct: 494 PPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKP----------------------- 530

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
                       D F + ++I    +  ++++A     +MV  G+  + V+YN LI+  C
Sbjct: 531 ------------DIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLC 578

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             G +  +  LL +M+  G   D ++   LI   C+ G ++ A+     M  +G   +  
Sbjct: 579 IIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNY 638

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y   +    + G+ + A  +F SME    + DSFT + ++  L K  +  +A K+  +C
Sbjct: 639 TYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTC 698

Query: 415 LKSGVRI 421
            + G+ +
Sbjct: 699 SEWGILV 705



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 114/229 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FCK + ++KA     +    G+ P++VT+N LID YC+         +L  + E
Sbjct: 466 NMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLE 525

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+ T++S+I G  R   +  +L    EM+  G+ P+  +YN L+H L  +G    
Sbjct: 526 HGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPR 585

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + ++ + M    + P   +FN ++   C+    ++A ++F  +   G +P+  TY   IK
Sbjct: 586 SMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIK 645

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
             C++GR   A+ +   +  +G  P++ T   I+    +  +++   +I
Sbjct: 646 VFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKI 694



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 39/345 (11%)

Query: 2   FGKLSTR----LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS 57
           FGK+  +      NI +    K   L +   I+   +  G+     TY  LI A      
Sbjct: 383 FGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGK 442

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
              G    N+M + G+  +V +YN +I    + S++  + +   EM   GIPP++     
Sbjct: 443 VTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNL----- 497

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
                                          TFN +++G CK      +  +   L +HG
Sbjct: 498 ------------------------------VTFNTLIDGYCKGGEICKSRDLLVMLLEHG 527

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
           F P++ T++ +I GLC+A ++  A     E+   G +PNA+TY  ++            +
Sbjct: 528 FKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSM 587

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++L  M+  G   D F +  +I +F ++G++++A      M++ G+  D  +Y   I ++
Sbjct: 588 KLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVF 647

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           C+ G+   A  L   ME  G   D +T  I++D L K    + A+
Sbjct: 648 CQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQ 692



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+A ++E A     + +  G+ P+ VTYN+LI + C          +L +M+  GI+PDV
Sbjct: 543 CRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDV 602

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            ++N+LI    R   +  +  L   ML +G+ PD ++Y + +    Q G+ +EA  +F  
Sbjct: 603 FSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLS 662

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           M      P + T NI+L+ L K    + A ++ +   + G +
Sbjct: 663 MEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGIL 704



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 6/239 (2%)

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +  C +R     L +E+L  +K  GY  +    C +I ++ ++G  K   +   Q+   
Sbjct: 152 VLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFL 211

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+      YN +I+   K   L+ AYL   +M     + D++T+ ILI G+C++G +  A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              ++ M  +G+  N+  Y  ++D      K+D A  V E+M+ +       T  S +H 
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           + +      A +L +  ++    + + A   ++  L      REA  +  K    KI H
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKK--FGKIGH 388



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 42/99 (42%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  + +FC+  ++E A+ +    + LG++PD  TY   I  +CQ   F+    +   M 
Sbjct: 605 FNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSME 664

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
             G  PD  T N ++    +      +  +     E GI
Sbjct: 665 ANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGI 703



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 6/160 (3%)

Query: 196 GRLRTARW---ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           GRL  A++   I  ++   G +P+   Y  ++    ++    L       M       D 
Sbjct: 193 GRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDR 252

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           F Y  +I    + G + EA   ++QM   G   ++ +Y  LI+ +    K++ A+ +L+ 
Sbjct: 253 FTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLET 312

Query: 313 MEKQGFECDKYTHTILIDGL--CKAGNIKGARLHLEYMNK 350
           M+ +     + T    I G+  C A N K   L +E++ +
Sbjct: 313 MKARKVSPSEATIRSFIHGVFRCVAPN-KAFELAIEFIER 351


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 203/415 (48%), Gaps = 10/415 (2%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
            A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++I
Sbjct: 471 PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVI 526

Query: 85  AGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GD 142
           AG      +  +LD++ EM E G I P+ ++Y +++    ++G+ DEA +VF +M+  G+
Sbjct: 527 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 586

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P    +N ++ G C     D AL     + + G    + TYN+L+  L   GR   A 
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 646

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +++E+G  G AP+  TY  ++    +    K  LEI   M R+G       Y  +I A 
Sbjct: 647 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 706

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K G+++E     ++ V  G++ D+V YN LIN +   G ++ A+ ++ EMEK+    D 
Sbjct: 707 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 766

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  L+ GLC  G +  AR  ++ M + G   +L  YN ++      G +  A+ +   
Sbjct: 767 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 826

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           M  K       TY++++  LCK  +   A  ++   +++G+    S   ++++GL
Sbjct: 827 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 174/359 (48%), Gaps = 2/359 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  FC   R++ A  I+ +   R G+ P+  TY  +I  +C+    D    + + M 
Sbjct: 523 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 582

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + P+ V YN+LI G      L  +L   D M+E G+   V +YN L+H LF  G+ 
Sbjct: 583 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 642

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  + ++M    L P   T+NI++NG CK      AL +F  + + G    +VTY  L
Sbjct: 643 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 702

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K G+++    +  E    G  P+ + Y  ++     +       EI+  M++K  
Sbjct: 703 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 762

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T++     +GR+ EA   +++M   G+Q D+V+YNTLI+ Y  +G ++ A  
Sbjct: 763 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 822

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           + +EM  +GF     T+  LI GLCK G    A   ++ M + G   +   Y  +++ L
Sbjct: 823 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + SL L   M  + +P    S + L+  L        A  +F DM    L  CT TFNIM
Sbjct: 439 ATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIM 494

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  LC       AL + R + +    P  VTYN +I G C  GR++ A  I++E+ + G 
Sbjct: 495 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 550

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 271
            APN  TY T++    +  +    +++   M  KG    +   Y  +I  +   G+L  A
Sbjct: 551 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 610

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             Y ++MV  GV + + +YN L++    +G+   AY L++EM  +G   D +T+ ILI+G
Sbjct: 611 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILING 670

Query: 332 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 356
            CK GN+K A    E M++ G                           FD         +
Sbjct: 671 HCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPD 730

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           L  YN +++     G ID A  +   ME K    D  TY++++  LC   R+  A KL+ 
Sbjct: 731 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 790

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              + G++        ++ G    G  ++A +I++++
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 164/330 (49%), Gaps = 16/330 (4%)

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R++  M    L   TA+ + +L+ L     +  A  +F  + +        T+NI+++ L
Sbjct: 443 RLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHL 498

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK-RKGYTF 250
           C AG+   A  +L+++      PNA+TY T++   C R R  +  L+I+  M+ R G   
Sbjct: 499 CSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAP 553

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLL 309
           + + Y TVI+ + K+GR+ EA    ++M+T G V+ + V YN LI  YC +GKL+ A L 
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 613

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D M ++G      T+ +L+  L   G    A   +E M   G   ++  YN +++   K
Sbjct: 614 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCK 673

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G +  A+ +FE+M  +       TY+++++ L K  ++    KL    ++ G+R     
Sbjct: 674 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 733

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             A+++    SG    A +I  ++   +I+
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIA 763



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 83/149 (55%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  + +   +  +++A  I+ +  +  + PD VTYN L+   C     D    +++ M
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 792

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E GI PD+VTYN+LI+G +    +  +L + +EM+  G  P + +YN+L+  L + G+ 
Sbjct: 793 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 852

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGL 157
           D+A  + ++M+   +TP  +T+  ++ GL
Sbjct: 853 DDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score = 41.2 bits (95), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 28/52 (53%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           G  P ++TYN LI   C+    D    ++  M E GI+PD  TY SLI G T
Sbjct: 831 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 882


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P V  YN +I   C+       Y +L +M E  I P+V TY  L+ G  R++    + ++
Sbjct: 86  PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM   G  P+  +Y +L+  L + G+ DEA RV  +    +L     T   ++ GLCK
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKELGDSGHAPNAI 218
               D+AL+    +++ G  P  VTY+ L+ G  + G L R  R+  +E    G +  A 
Sbjct: 206 ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAA 265

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y   +    +        + +  +++ G   D   Y  +I  F + G+   + + +E M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             +GV+ D+V+Y+TLIN+ CKE K + A+ LL+ ME  G   +  T+  ++DGLCK+G +
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKM 385

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE----SMEVKDSFTYSSM 394
                  E M K     ++  Y+ I++ L K G +D A+ +FE    S E  D+  YS +
Sbjct: 386 DEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMV 445

Query: 395 VHNLCKAKRLPSA 407
           + +LC+A +L  A
Sbjct: 446 ITSLCRAGKLEEA 458



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 184/381 (48%), Gaps = 6/381 (1%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           EAG   D   +  L     R S  S  + L   +   G+     +Y  ++  L   G  +
Sbjct: 12  EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  + +++  G  TP    +N ++ GLC+     +A ++   + +   VP + TY IL+
Sbjct: 72  QALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILL 130

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC++ + + AR + +E+  +G  PN ITY T+++   R  +    L ++   +     
Sbjct: 131 NGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP 190

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D     T++    K  RL +A  +ME+M   GV+ + V+Y+ L++ + + G+L+     
Sbjct: 191 TDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRF 250

Query: 310 LDEME-KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            +E + ++G   +   +   +D LCKAG +  AR  +E + + G   ++  Y+ +++   
Sbjct: 251 FEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFA 310

Query: 369 KDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + G+ D ++ + E M    VK D  TYS++++ LCK ++   A +LL     +G      
Sbjct: 311 RAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
              +V+DGL  SG   E  ++
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRV 391



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 111/185 (60%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  L++A   + +  + GV+PDVVTY+MLI+ + +   FDA   +L  MR  G+ PD
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY++LI    +      +  LL+ M   G PP+V +YNS+M  L + GK DE +RV++
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+    +P   T++I++NGL K    D+A+++F  ++     P+   Y+++I  LC+AG
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453

Query: 197 RLRTA 201
           +L  A
Sbjct: 454 KLEEA 458



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 44/294 (14%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------------- 49
           ++  CT      CKA+RL+ A   + +  ++GV P+ VTY+ L+                
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251

Query: 50  --------------------DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR 89
                               DA C+    D     +  +R++G+ PDVVTY+ LI    R
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311

Query: 90  NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 SL+LL++M   G+ PDV +Y++L++ L +  K  +A R+ + M      P   T
Sbjct: 312 AGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVT 371

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N +++GLCK+   D   R++  + K    P++VTY+I++ GL KAG L +A  + + + 
Sbjct: 372 YNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
            S   P+A  Y+ ++    R  K +    +   M+    T  G   C  +A  V
Sbjct: 432 SSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME---VTVAGDNICRALAGLV 482


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 179/363 (49%), Gaps = 8/363 (2%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TYN +I + C+     +    L+ M  +G  PD  T+NSLI G  R + +  + DL D+M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G   DV SY +L+    + G+ DEA  +F +M   D+      +  ++ GLCK    
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDM----HMYAALVKGLCKAGRG 128

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           +  L M R +++ G+ P    Y  ++   C   + + A  +L+E+ + G AP  +T T +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  +    L +L  MK +G   + + Y  ++  F   G++ +A   + +M   GV
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V+YN LI   C +G +E+A+ LL  ME  G   D+YT+  LI+ LCK G    A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
             + +   G   N   +N +++ L K GK+D A    E M       D++TYSS + +LC
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 400 KAK 402
           K K
Sbjct: 369 KMK 371



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 221/474 (46%), Gaps = 30/474 (6%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           M  ++  + L  CV T       +CK  R+  A  ++      G  P+V TYN L+  +C
Sbjct: 169 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 228

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                     +LN+MR  G++PD VTYN LI G   +  +  +  LL  M   G+  D +
Sbjct: 229 NEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 288

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN+L++ L + G+ D+A  +F  +    + P   TFN ++NGLCK+   D A +    +
Sbjct: 289 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P+  TY+  I+ LCK    +     + E+      P+ + YT ++    + R Y
Sbjct: 349 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 408

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
            L       M   G   D   Y T + A+   GRL EA + + +M  +GV +D ++YNTL
Sbjct: 409 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 468

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK------------AGNIKGA 341
           ++ +   G+ + A  +L +M       +++T+ IL+  L +            AG  K  
Sbjct: 469 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI 528

Query: 342 RLH-----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----Y 391
            L       + M K  F  N   Y+ I++   +DG+ + A ++   M+ +DS +     Y
Sbjct: 529 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK-EDSISLNEDIY 587

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +++V   CK+KR   A  L+ S ++ G      + + ++ GL   G   +AK+I
Sbjct: 588 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 204/460 (44%), Gaps = 41/460 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + C+   L  A   +   +R G  PD  T+N LI  YC+    D    + ++M  
Sbjct: 15  NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDE---------------------------- 102
            G + DVV+Y +LI G      +  +++L  E                            
Sbjct: 75  RGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLM 134

Query: 103 ---MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M E+G  P   +Y +++       K  EA  + Q+M    L PC  T   ++N  CK
Sbjct: 135 LRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCK 194

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                +ALR+   ++  G  P + TYN L++G C  G++  A  +L ++   G  P+A+T
Sbjct: 195 EGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVT 254

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  +++    +   +    +L  M+  G   D + Y  +I A  K GR  +A    + + 
Sbjct: 255 YNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLE 314

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           T G++ + V++N+LIN  CK GK++ A+  L++M   G   D YT++  I+ LCK   +K
Sbjct: 315 TRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK---MK 371

Query: 340 GARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           G++  L ++ ++       +   Y  ++ +L K+         +  M       D  TY+
Sbjct: 372 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 431

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + +   C   RL  A  +L+   K+GV +   A   ++DG
Sbjct: 432 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 471



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 8/344 (2%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TYN++I    R + L+ +L  L  M+  G  PD +++NSL+    +  + D A  +F  M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                     ++  ++ G C+    D A+ +F  + +    P++  Y  L+KGLCKAGR 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
                +L+ + + G  P+   Y  ++      RK K   E+L  M  KG          V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I A+ K GR+ +A   +E M   G + ++ +YN L+  +C EGK+  A  LL++M   G 
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  T+ +LI G C  G+I+ A   L  M   G  ++   YN +++ L KDG+ D A +
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +F+S+E +    ++ T++S+++ LCK+ ++  A K L   + +G
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 183/391 (46%), Gaps = 6/391 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R E+   ++     LG  P    Y  ++D  C          +L  M E G++P 
Sbjct: 122 LCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPC 181

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT  ++I    +   +S +L +L+ M   G  P+VW+YN+L+      GK  +A  +  
Sbjct: 182 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLN 241

Query: 137 DM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M +CG + P   T+N+++ G C + + ++A R+ R ++  G + +  TYN LI  LCK 
Sbjct: 242 KMRVCG-VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKD 300

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR   A  +   L   G  PNA+T+ +++    ++ K  +  + L  M   G T D + Y
Sbjct: 301 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTY 360

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            + I    K+   +E   ++ +M+   V+   V+Y  +I+   KE           EM  
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 420

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   D  T+T  +   C  G +  A   L  M+K G   +  AYN ++D     G+ DH
Sbjct: 421 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 480

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKAK 402
           A+++ + M     V + FTY  ++ +L + +
Sbjct: 481 AVSILKQMTSVASVPNQFTYFILLRHLVRMR 511



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 162/403 (40%), Gaps = 90/403 (22%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++ D  TYN LI+A C+    D   ++ + +   GI P+ VT+NSLI G  ++  +  +
Sbjct: 282 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIA 341

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              L++M+  G  PD ++Y+S +  L ++    E      +M+  D+ P T  + I+++ 
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 401

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-------- 208
           L K R      R +  +   G  P++VTY   ++  C  GRL  A  +L E+        
Sbjct: 402 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 461

Query: 209 --------------GDSGHA-------------PNAITYTTIMKCCFRNRKYKLGLEILS 241
                         G + HA             PN  TY  +++   R R  +  L +  
Sbjct: 462 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 521

Query: 242 A-----------------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           A                 MK+  +  +   Y +++  F + GR +EAT  +  M  D + 
Sbjct: 522 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 581

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF-------------------------- 318
           L+   Y  L+  +CK  +   A++L+  M + GF                          
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641

Query: 319 ---------ECDKYTHTILIDGLCKAGNIKGAR---LHLEYMN 349
                      D+    ++IDGL K G+   +R   + LE MN
Sbjct: 642 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 684



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 8/241 (3%)

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY  +++   R       L  LS M R G+  D + + ++I  + +  ++  A D  ++M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   D+VSY  LI  +C+ G+++ A  L  EM++     D + +  L+ GLCKAG  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQP----DMHMYAALVKGLCKAGRG 128

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSM 394
           +   L L  M ++G+  +  AY  +VD    + K   A  + + M  K       T +++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           ++  CK  R+  A ++L      G +       A+V G  + G   +A  + +K+R+  +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 455 S 455
           +
Sbjct: 249 N 249


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 197/411 (47%), Gaps = 4/411 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    N  +   C+   L++A  +  +    G+LPDV +Y++LID +C+    D    +
Sbjct: 278 LNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEV 337

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              MR +GI P++ +Y+ LI G  +   +  +L++ +EM   GI PDV+SY+ L+    +
Sbjct: 338 FKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCR 397

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D A + +++M   + +P    +  ++ G  K++   NAL+ FR +QK G  P+ + 
Sbjct: 398 KGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIA 457

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
            N ++   C+      A  + ++  ++G   N  +Y   +    R    +  L++L  M 
Sbjct: 458 CNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVML 517

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           ++    D   Y T+I+ F K    ++A     +M   G+  ++ +Y  LINL+  + K++
Sbjct: 518 KRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMD 577

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            AY L   M++     D+  +T L+ G C  G +  AR   + M++ G   N+  Y C +
Sbjct: 578 VAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +   K  K + A  ++E M+ +    D   Y+ ++   C    +  A  L 
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 202/457 (44%), Gaps = 48/457 (10%)

Query: 10  LNICVCTF-----CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ----FVSFDA 60
           LNI  C F      + NR++    +    I+ G  P++ TY ++++ +C+     V    
Sbjct: 169 LNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRR 228

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              IL ++  +G +P+VVTY + I G  +  L   +  L+  +     P +   +N++++
Sbjct: 229 ASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIY 288

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L Q G  DEA+ VF++M    + P   +++I+++G C+    D A  +F+ ++  G +P
Sbjct: 289 GLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILP 348

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            + +Y+ILI G CK GR+  A  + +E+ +SG  P+  +Y+ ++    R       ++  
Sbjct: 349 NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFW 408

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M    ++   F YC++I  + K  +   A      M   G+  D ++ N ++++YC++
Sbjct: 409 EEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRK 468

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------ 336
                A  L ++ ++ G   + Y++   I  +C+                          
Sbjct: 469 PDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNY 528

Query: 337 -----------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
                      N + A +    M K+G   N++ Y  +++    D K+D A  +F+ M+ 
Sbjct: 529 STLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKE 588

Query: 385 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                D   Y+S+V   C    +  A  L     + G
Sbjct: 589 SRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG 625



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 4/311 (1%)

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V ++ LI     NS+L  +  +     + GI  ++ S N L+ CL +  + D    +F+ 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALR----MFRGLQKHGFVPELVTYNILIKGLC 193
           +I     P   T+ IM+N  C+       +R    +   +   G  P +VTY   IKGLC
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G    A  +++ L       N   +  ++    +        E+   MK  G   D +
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I  F + GR+ +A++  ++M   G+  +I SY+ LI+ +CKEG+++ A  + +EM
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           +  G   D Y+++ILIDG C+ G++  A    E M    F  +   Y  ++    K  + 
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQF 436

Query: 374 DHAINVFESME 384
            +A+  F  M+
Sbjct: 437 ANALKEFRIMQ 447



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 42/311 (13%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           +LG+ PD +  N ++  YC+   F+    +  + +E G+  +  +YN  I    R S+  
Sbjct: 448 KLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPE 507

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L LL  ML+  + PDV +Y++L+ C  +    ++A  +F  M    +T    T+ I++
Sbjct: 508 KALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILI 567

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N    +   D A R+F+G+++    P+ + Y  L+ G C  G +  AR +  E+   G +
Sbjct: 568 NLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCS 627

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-------YT------------------ 249
           PN +TYT  +    +  K     ++   MK +G       YT                  
Sbjct: 628 PNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEAL 687

Query: 250 FDGF---GYCT--------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           FD     G CT        +I +++K+ +  +A    E+M   G+     S  ++   +C
Sbjct: 688 FDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747

Query: 299 ------KEGKL 303
                 K GKL
Sbjct: 748 CRHQVLKTGKL 758



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 8/277 (2%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           D+      F++++     N   ++A  +F   +  G    +++ N L+K L +  R+   
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFR----NRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           R + + L   G  PN  TYT +M    R    +   +   EIL  +   G T +   Y T
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
            I    K+G    A   ++ +      L+   +N +I   C+ G L+ A  +  EM+  G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D Y+++ILIDG C+ G +  A    + M   G   N+ +Y+ ++D   K+G++D A+
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            VFE M+    + D ++YS ++   C+   + SA K 
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKF 407



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/312 (19%), Positives = 124/312 (39%), Gaps = 63/312 (20%)

Query: 170 FRG-LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           F+G +Q HGF   + +++I+I     AG       +++++         +T+        
Sbjct: 72  FKGCVQIHGFENSINSFSIIIHTYALAGMSWEVFILIRDI---------VTFYKE----- 117

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
            NR     + +L  +++    FD      +I  F     L+ A     +   DG++L+I+
Sbjct: 118 ENRDAGELVSLLLDVEKSNVVFD-----MLIKVFASNSMLEHANYVFVRAKDDGIELNIM 172

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL-------------------- 328
           S N L+    ++ +++   LL + + K G   + +T+TI+                    
Sbjct: 173 SCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEI 232

Query: 329 -------------------IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
                              I GLCK G    A   ++ + +     N   +N ++  L +
Sbjct: 233 LGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQ 292

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A  VF+ M+    + D ++YS ++   C+  R+  AS++      SG+     +
Sbjct: 293 GGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYS 352

Query: 426 QKAVVDGLRHSG 437
              ++DG    G
Sbjct: 353 YSILIDGFCKEG 364


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 188/384 (48%), Gaps = 5/384 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV PD  ++  L+   C+   F+    +L  M   G   D  T   ++    R       
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            DL   M EMG PP++ +Y++ +  L + G   +A  V ++M+   L P   T   +++G
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 157 LCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           LCK  + + A R+F  L K   + P + TY ++I G CK G+L  A  +L  + + G AP
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N  TYTT++    +   +    E+++ MK +G+  + + Y  +I  F K G+++EA   +
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
               + G+ LD V+Y  LI  +CK+G +  A  L  +M ++    D +T+T +I   C+ 
Sbjct: 416 RMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQ 475

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
             ++ ++   +    IG     + Y  ++    + GK+  A+ VFE M     + DS TY
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITY 535

Query: 392 SSMVHNLCKAKRLPSASKLLLSCL 415
            +++ +LCK  RL  A  L  + L
Sbjct: 536 GALISSLCKESRLEEARALFETML 559



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 172/367 (46%), Gaps = 1/367 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+  R E+A+A++      G   D  T  +++ A+C+   F     +  RM E G  P++
Sbjct: 192 CREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNM 251

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y++ I G      +  +  +L+EM+  G+ P+V+++ SL+  L ++G  + A R+F  
Sbjct: 252 VNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLK 311

Query: 138 MI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++      P   T+ +M+ G CK      A  +   + + G  P   TY  LI G CK G
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGG 371

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  ++ ++   G  PN  TY  I+    +  K +   ++L     +G   D   Y 
Sbjct: 372 SFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYT 431

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G +  A D  +QM       DI +Y T+I +YC++ ++E +  L D+    
Sbjct: 432 ILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSI 491

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G    K T+T +I G C+ G +  A    E M + G   +   Y  ++  L K+ +++ A
Sbjct: 492 GLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEA 551

Query: 377 INVFESM 383
             +FE+M
Sbjct: 552 RALFETM 558



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 199/447 (44%), Gaps = 14/447 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + V  FC+  R      +      +G  P++V Y+  ID  C+       + +L  M  
Sbjct: 220 TVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVG 279

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPD 129
            G+ P+V T+ SLI G  +   +  +  L  ++++     P+V +Y  ++    + GK  
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +   M+   L P T T+  +++G CK    D A  +   ++  GF+P + TYN +I
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK G+++ A  +L+     G   + +TYT ++    +       L++   M  K   
Sbjct: 400 GGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCH 459

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+IA + +  +++++    ++ ++ G+     +Y ++I  YC+ GKL +A  +
Sbjct: 460 PDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKV 519

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG- 368
            + M + G   D  T+  LI  LCK   ++ AR   E M     D +L    C V R+  
Sbjct: 520 FERMVQHGCLPDSITYGALISSLCKESRLEEARALFETM----LDKHL--VPCDVTRVTL 573

Query: 369 -----KDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
                +  KI  A++  + ++ +  + T  ++V  L     L +AS  L + L     + 
Sbjct: 574 AYEYCRRDKITIAVSFLDRLDKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVD 633

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +   + ++    S     A +I  KI
Sbjct: 634 HATYTSFINSCYESNRYALASEISEKI 660



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 143/325 (44%), Gaps = 14/325 (4%)

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHC-LFQLGKPDEANRVFQDMI--CGDLTPCTATFNIML 154
           D+L E+   G+P  V + N ++   L   G    A   F  M    G + P   +F  ++
Sbjct: 129 DMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALV 188

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            G C+    + A  +   +   GF  +  T  ++++  C+ GR R    + + + + G  
Sbjct: 189 LGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTP 248

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN + Y+  +         K    +L  M  KG   + + + ++I    KIG ++ A   
Sbjct: 249 PNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRL 308

Query: 275 MEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++V +   + ++ +Y  +I  YCKEGKL  A +LL  M +QG   +  T+T LI G C
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHC 368

Query: 334 KAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           K G+   A    E MNK+   GF  N+  YN I+    K GKI  A  V      +    
Sbjct: 369 KGGSFDRA---FELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHL 425

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           D  TY+ ++   CK   +  A  L 
Sbjct: 426 DKVTYTILITEHCKQGHITCALDLF 450



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 141/296 (47%), Gaps = 11/296 (3%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIK-GLCKAGRLRTARWILKELGDS--GHAPNAITYT 221
            A  M   L+ HG    + T N +++ GL   G    AR     +  +  G  P+  ++ 
Sbjct: 126 EAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFR 185

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++  C R  +++    +L+AM  +G+  D      V+ AF + GR +  TD   +M   
Sbjct: 186 ALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEM 245

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G   ++V+Y+  I+  C+ G ++ A+ +L+EM  +G + + YTHT LIDGLCK G ++ A
Sbjct: 246 GTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERA 305

Query: 342 -RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVH 396
            RL L+ +    +  N+  Y  ++    K+GK+  A      + E     ++ TY++++H
Sbjct: 306 FRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIH 365

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
             CK      A +L+      G         A++ G    G  +EA K+   +RMA
Sbjct: 366 GHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKV---LRMA 418



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 32/268 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  ++++A  ++      G+  D VTY +LI  +C+         +  +M E
Sbjct: 396 NAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAE 455

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PD+ TY ++IA   +   +  S  L D+ L +G+ P   +Y S++    +LGK   
Sbjct: 456 KSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTS 515

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP---------- 180
           A +VF+ M+     P + T+  +++ LCK    + A  +F  +     VP          
Sbjct: 516 ALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAY 575

Query: 181 ----------------------ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                                 +  T + L++ L   G L  A   LK + D  +A +  
Sbjct: 576 EYCRRDKITIAVSFLDRLDKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHA 635

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           TYT+ +  C+ + +Y L  EI   + ++
Sbjct: 636 TYTSFINSCYESNRYALASEISEKISKR 663


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 211/440 (47%), Gaps = 8/440 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L+N     +C A  L  A+  +   +R G+ PD   Y   +  YC+   F     +  
Sbjct: 78  TTLIN----AYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFL 133

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M + G +    TY +L+ G     ++  ++ +   M   G  PD   Y+ ++H L   G
Sbjct: 134 LMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAG 193

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA  +  D +     P  A +N +++G C     + A+ +F+G+Q  G +P + TY 
Sbjct: 194 RAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYT 253

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK+G++  A  +   + ++G APN +TYTT+++        +    +L +M+  
Sbjct: 254 QLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEAC 313

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + +    +I A  K GR++EA  ++  +V  G++++ V Y ++I+  CK GK + A
Sbjct: 314 GLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGA 373

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + L+ ++  +GF  D + ++ LIDGLC+   +  A   L  M + G  +N   +  ++D+
Sbjct: 374 HNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDK 433

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             ++ + D    + + M       D  TY+  + + C+  R+  A  +++  +  GVR  
Sbjct: 434 HLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPN 493

Query: 423 KSAQKAVVDGLRHSGCRREA 442
            +    ++ G  + G   +A
Sbjct: 494 LTTYNTLIKGYANLGLVSQA 513



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 171/381 (44%), Gaps = 39/381 (10%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY  LI+AYC      A    L+ +  AG++PD   Y S + G  R  L + +  L   M
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
            + G     ++Y +L+  L   G   EA  VF  M      P +  ++IM++GLC     
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A+ +       GFVP +  YN LI G C  G L  A  I K +   G  PN  TYT +
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                                              I  F K G+++ A     +M+  G+
Sbjct: 256 -----------------------------------ICGFCKSGKVERAMVLYSRMIEAGL 280

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             ++V+Y TLI   C EG LE A+ LL  ME  G   +++T  +LID LCK G I+ A+ 
Sbjct: 281 APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQ 340

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
            L  + + G   N   Y  ++D L K GK D A N+ + +     V D+  YSS++  LC
Sbjct: 341 FLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLC 400

Query: 400 KAKRLPSASKLLLSCLKSGVR 420
           +  +L  A  LL   ++SGV+
Sbjct: 401 RENKLLEAISLLNDMIESGVQ 421



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 191/426 (44%), Gaps = 20/426 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           + + +I V   C A R  +A A++ D +  G +P+V  YN LID YC     +    I  
Sbjct: 179 SHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFK 238

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G  P+V TY  LI G  ++  +  ++ L   M+E G+ P+V +Y +L+      G
Sbjct: 239 GMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEG 298

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             + A R+   M    L P   T  ++++ LCK+   + A +    L + G     V Y 
Sbjct: 299 HLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYT 358

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I  LCK+G+   A  +++++   G  P+A  Y++++    R  K    + +L+ M   
Sbjct: 359 SMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIES 418

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   +  +I   ++  R        ++M   GV+ D+V+Y   I  YC++G++E A
Sbjct: 419 GVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDA 478

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             ++ +M   G   +  T+  LI G    G +  A   L+ M   G   N E+Y  ++  
Sbjct: 479 ESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGL 538

Query: 367 LGKDGK----IDHAINVFESMEVK----------------DSFTYSSMVHNLCKAKRLPS 406
           L K       +  +I++++ +++K                 S+ Y   +  L K  RL  
Sbjct: 539 LLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEE 598

Query: 407 ASKLLL 412
           A   L+
Sbjct: 599 AKSFLV 604



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 163/367 (44%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A  + +A A+       G  PD   Y++++   C          +L      G  P+
Sbjct: 154 LCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPN 213

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V  YN+LI G      L  ++D+   M   G  P+V +Y  L+    + GK + A  ++ 
Sbjct: 214 VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYS 273

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   L P   T+  ++ G C   + ++A R+   ++  G  P   T  +LI  LCK G
Sbjct: 274 RMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHG 333

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A+  L  L   G   N + YT+++    ++ K+     ++  +  +G+  D   Y 
Sbjct: 334 RIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYS 393

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    +  +L EA   +  M+  GVQ + V +  LI+ + +E + ++  ++ D M   
Sbjct: 394 SLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAA 453

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + D  T+T+ I   C+ G ++ A   +  M   G   NL  YN ++      G +  A
Sbjct: 454 GVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQA 513

Query: 377 INVFESM 383
            +  ++M
Sbjct: 514 FSSLKNM 520



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 203/487 (41%), Gaps = 57/487 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C    LE A  I       G LP+V TY  LI  +C+    +    + +RM EAG++P+
Sbjct: 224 YCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPN 283

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +LI G      L  +  LL  M   G+ P+ W+   L+  L + G+ +EA +   
Sbjct: 284 VVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLG 343

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            ++   +      +  M++ LCK+   D A  + + +   GFVP+   Y+ LI GLC+  
Sbjct: 344 SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN 403

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +L ++ +SG   NA+ +T ++    R  +      I   M   G   D   Y 
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYT 463

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
             I ++ + GR+++A   M QM+  GV+ ++ +YNTLI  Y   G +  A+  L  M   
Sbjct: 464 VFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN 523

Query: 317 GFECDKYTHTIL------------------------------------------------ 328
           G + +  ++T+L                                                
Sbjct: 524 GCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVY 583

Query: 329 ---IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
              I  L K   ++ A+  L  M       + + Y C+++   +   +  A+   +SM V
Sbjct: 584 DCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSM-V 642

Query: 386 KDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           K ++     +Y  ++  LC+     +A  +    L       + A K ++DGL   G   
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTA 702

Query: 441 EAKKIQS 447
           +  ++ S
Sbjct: 703 DCSRLLS 709



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 162/380 (42%), Gaps = 45/380 (11%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLGKPDEANR 133
           P +   N+L+    R+ +LS   D+  E L   +P  ++ +Y +L++     G    A R
Sbjct: 41  PPIRCLNTLLMALARHGMLS---DM--ESLAARMPVRNLHTYTTLINAYCHAGDLPAAKR 95

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
               ++   L P +  +   + G C+     +A R+F  + + G      TY  L++GLC
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            AG +R A  +   +   G AP++  Y+ ++                             
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVH---------------------------- 187

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           G C         GR  EA   +   +  G   ++  YN LI+ YC  G LE A  +   M
Sbjct: 188 GLCGA-------GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM 240

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           + +G   +  T+T LI G CK+G ++ A +    M + G   N+  Y  ++     +G +
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL 300

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           +HA  +  SME      + +T   ++  LCK  R+  A + L S ++ G+++ +    ++
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSM 360

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +D L  SG    A  +  KI
Sbjct: 361 IDALCKSGKFDGAHNLMQKI 380



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 16/316 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+ N+L +A +++ D I  GV  + V + +LID + +    D+   I +RM  AG+ PD
Sbjct: 399 LCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY   I    ++  +  +  ++ +M++ G+ P++ +YN+L+     LG   +A    +
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLK 518

Query: 137 DMICGDLTPCTATFNIMLNGLCK-NRYTD---NALRMFRGLQK---HGFVPELV------ 183
           +MI     P   ++ ++L  L K N Y D   +++ +++ +        + E++      
Sbjct: 519 NMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSS 578

Query: 184 ---TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
               Y+  I+ L K  RL  A+  L  +  +   P+   YT +++CC+R +  K  L  L
Sbjct: 579 ASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFL 638

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
            +M ++ Y      Y  +I A  + G    A      +++     D +++  LI+   ++
Sbjct: 639 DSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQK 698

Query: 301 GKLEAAYLLLDEMEKQ 316
           G       LL  ME+Q
Sbjct: 699 GNTADCSRLLSFMEEQ 714



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 140/351 (39%), Gaps = 16/351 (4%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK+ + + A  ++   I  G +PD   Y+ LID  C+        ++LN M E+G+  
Sbjct: 363 ALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQA 422

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + V +  LI    R         + D M   G+ PDV +Y   +    Q G+ ++A  + 
Sbjct: 423 NAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMM 482

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             MI   + P   T+N ++ G         A    + +  +G  P   +Y +L+  L K 
Sbjct: 483 IQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKK 542

Query: 196 GR----------------LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
                             ++    +L+E+     +  +  Y   ++C  +  + +     
Sbjct: 543 NSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSF 602

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L  M+    T     Y  +I    ++  LKEA  +++ MV       + SY  +I   C+
Sbjct: 603 LVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCE 662

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           EG    A  +  ++  + +  D+    ILIDGL + GN       L +M +
Sbjct: 663 EGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEE 713



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 68/162 (41%)

Query: 27  EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG 86
           E ++ + I+L        Y+  I    +    +   + L  M+ A ++P    Y  +I  
Sbjct: 565 EELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIEC 624

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
             R  LL  +L  LD M++    P + SY  ++  L + G    A  +F D++  +    
Sbjct: 625 CYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRD 684

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
              + I+++GL +   T +  R+   +++    P    Y+ L
Sbjct: 685 EIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 222/474 (46%), Gaps = 30/474 (6%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           M  ++  + L  CV T       +CK  R+  A  ++      G  P+V TYN L+  +C
Sbjct: 133 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 192

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                    T+LN+MR  G++PD VTYN LI G   +  +  +  LL  M   G+  D +
Sbjct: 193 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 252

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN+L++ L + G+ D+A  +F  +    + P   TFN ++NGLCK+   D A +    +
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 312

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P+  TY+  I+ LCK    +     + E+      P+ + YT ++    + R Y
Sbjct: 313 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 372

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
            L       M   G   D   Y T + A+   GRL EA + + +M  +GV +D ++YNTL
Sbjct: 373 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 432

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK------------AGNIKGA 341
           ++ +   G+ + A  +L +M       +++T+ IL+  L +            AG  K  
Sbjct: 433 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI 492

Query: 342 RLH-----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----Y 391
            L       + M K  F  N   Y+ I++   +DG+ + A ++   M+ +DS +     Y
Sbjct: 493 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK-EDSISLNEDIY 551

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +++V   CK+KR   A  L+ S ++ G      + + ++ GL   G   +AK+I
Sbjct: 552 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 8/339 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M  +G  PD  T+NSLI G  R + +  + DL D+M   G   DV SY +L+  L + G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA  +F +M   D+      +  ++ GLC     +  L M R +++ G+ P    Y  
Sbjct: 61  IDEAVELFGEMDQPDM----HMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++   C+  + + A  +L+E+ + G AP  +T T ++    +  +    L +L  MK +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              + + Y  ++  F   G++ +A   + +M   GV  D V+YN LI   C +G +E+A+
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL  ME  G   D+YT+  LI+ LCK G    A    + +   G   N   +N +++ L
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
            K GK D A    E M       D++TYSS + +LCK K
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 335



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 198/430 (46%), Gaps = 14/430 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +C+ N+++ A  +       G   DVV+Y  LI+  C+    D    +   M 
Sbjct: 13  FNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 72

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +    PD+  Y +L+ G          L +L  M E+G  P   +Y +++    +  K  
Sbjct: 73  Q----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 128

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  + Q+M    L PC  T   ++N  CK     +ALR+   ++  G  P + TYN L+
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C  G++  A  +L ++   G  P+A+TY  +++    +   +    +L  M+  G  
Sbjct: 189 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 248

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  +I A  K GR  +A    + + T G++ + V++N+LIN  CK GK + A+  
Sbjct: 249 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 308

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDR 366
           L++M   G   D YT++  I+ LCK   +KG++  L ++ ++       +   Y  ++ +
Sbjct: 309 LEKMVSAGCTPDTYTYSSFIEHLCK---MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K+         +  M       D  TY++ +   C   RL  A  +L+   K+GV + 
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425

Query: 423 KSAQKAVVDG 432
             A   ++DG
Sbjct: 426 TMAYNTLMDG 435



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 4/390 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R E+   ++     LG  P    Y  ++D  C+         +L  M E G++P 
Sbjct: 86  LCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 145

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT  ++I    +   +S +L +L+ M   G  P+VW+YN+L+      GK  +A  +  
Sbjct: 146 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 205

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+N+++ G C + + ++A R+ R ++  G + +  TYN LI  LCK G
Sbjct: 206 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 265

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  +   L   G  PNA+T+ +++    ++ K  +  + L  M   G T D + Y 
Sbjct: 266 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 325

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           + I    K+   +E   ++ +M+   V+   V+Y  +I+   KE           EM   
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+T  +   C  G +  A   L  M+K G   +  AYN ++D     G+ DHA
Sbjct: 386 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHA 445

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAK 402
           +++ + M     V + FTY  ++ +L + +
Sbjct: 446 VSILKQMTSVASVPNQFTYFILLRHLVRMR 475



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 8/316 (2%)

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+     P   TFN ++ G C+    D A  +F  +   GF  ++V+Y  LI+GLC+AGR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +  E+      P+   Y  ++K      + + GL +L  MK  G+      Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           V+    +  + KEA + +++M   G+   +V+   +IN YCKEG++  A  +L+ M+ +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + + +T+  L+ G C  G +  A   L  M   G + +   YN ++     DG I+ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +   ME    + D +TY+++++ LCK  R   A  L  S    G++       ++++GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 434 RHSGCRREAKKIQSKI 449
             SG    A K   K+
Sbjct: 297 CKSGKADIAWKFLEKM 312



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 161/403 (39%), Gaps = 90/403 (22%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++ D  TYN LI+A C+    D   ++ + +   GI P+ VT+NSLI G  ++     +
Sbjct: 246 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 305

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              L++M+  G  PD ++Y+S +  L ++    E      +M+  D+ P T  + I+++ 
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-------- 208
           L K R      R +  +   G  P++VTY   ++  C  GRL  A  +L E+        
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425

Query: 209 --------------GDSGHA-------------PNAITYTTIMKCCFRNRKYKLGLEILS 241
                         G + HA             PN  TY  +++   R R  +  L +  
Sbjct: 426 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 485

Query: 242 A-----------------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           A                 MK+  +  +   Y +++  F + GR +EAT  +  M  D + 
Sbjct: 486 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 545

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF-------------------------- 318
           L+   Y  L+  +CK  +   A++L+  M + GF                          
Sbjct: 546 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605

Query: 319 ---------ECDKYTHTILIDGLCKAGNIKGAR---LHLEYMN 349
                      D+    ++IDGL K G+   +R   + LE MN
Sbjct: 606 FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 648



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M + G+  D YT   LI G C+   +  AR   + M   GF  ++ +Y  +++ L + G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           ID A+ +F  M+  D   Y+++V  LC A+R      +L    + G R    A  AVVD 
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD- 119

Query: 433 LRHSGCR-REAKKIQSKIR 450
            R   CR R+AK+ +  ++
Sbjct: 120 FR---CRERKAKEAEEMLQ 135


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 213/444 (47%), Gaps = 5/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    +   + KA  +  + ++ GV+PDVVTY  +IDA C+  + D    +L +M  
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ VTYN +I G + +     +  +  EM   G+ P++ + NS M  L + GK  E
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F  M      P   T++++L+G        + L +F  ++ +G V +   +NI+I 
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K G +     I  ++ + G  P+A TY  ++    R  +    ++  + M   G   
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV-QLDIVSYNTLINLYCKEGKLEAAYLL 309
           +G  Y ++I  F   G L +A + + +M++ G+ + +IV +N++IN  CKEG++  A+ +
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D +   G   D  T   LIDG    G I+ A   L+ M   G + ++ +YN ++D   +
Sbjct: 531 FDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCR 590

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G+ID  + +F  M  K     + TY  ++H L    R   A K+    ++SG  +  S 
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              ++ GL  + C  EA  +  K+
Sbjct: 651 CGIILGGLCRNNCDDEAIAMFKKL 674



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 217/474 (45%), Gaps = 50/474 (10%)

Query: 14  VCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDA-YCQFVSFDAGYTIL 65
           VCT+       C+  R     A+    ++ G+  DV+  ++L+   Y    S D    +L
Sbjct: 119 VCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLL 178

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM--GIPPDVWSYNSLMHCLF 123
           +RM E G+ PD ++YN+++     +S    +LDLL  M++   G  P+V +YN+++H LF
Sbjct: 179 HRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLF 238

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+  +A  +F +M+   + P   T+  +++ LCK R  D A  + R +  +GF P  V
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKV 298

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN +I G   +G+ +    + +E+   G  PN +T  + M    ++ K K   E   +M
Sbjct: 299 TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG+  +   Y  ++  +   G   +  +    M  +G+  D   +N +I+ Y K G +
Sbjct: 359 AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMM 418

Query: 304 EAAYLLLDEMEKQGFECDKYTHTI-----------------------------------L 328
           +   L+  +M++QG   D  T+ I                                   L
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSL 478

Query: 329 IDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 383
           I G C  GN +K   L  E M++     N+  +N I++ L K+G++  A ++F+ +    
Sbjct: 479 IQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIG 538

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           E  D  T++S++       ++  A  +L + + +G+     +   ++DG   +G
Sbjct: 539 ERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 143/294 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  + + CK  R+ +A  I    I +G  PDV+T+N LID Y      +  + +L+ M
Sbjct: 510 FFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM 569

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             AGI PDVV+YN+LI G  RN  +   L L  EML  G+ P   +Y  ++H LF  G+ 
Sbjct: 570 ISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A ++  +MI    T   +T  I+L GLC+N   D A+ MF+ L        +   N +
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  + K  +   A+ +   +  +G  PNA TY  ++K   +    +    + S M++ G 
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                    +I   ++ G + +A +YM ++    + L+  + + L+ L+ +EGK
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGK 803



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 1/349 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++ D   +N++IDAY +    D    I  +M+E G+ PD  TY  +IA  +R   L+ +
Sbjct: 397 GIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADA 456

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLN 155
           +D  ++M+ MG+ P+   Y+SL+      G   +A  +  +M+  G   P    FN ++N
Sbjct: 457 MDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIIN 516

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK      A  +F  +   G  P+++T+N LI G    G++  A  +L  +  +G  P
Sbjct: 517 SLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEP 576

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y T++    RN +   GL +   M  KG       Y  ++      GR   A    
Sbjct: 577 DVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+  G  +DI +   ++   C+    + A  +  ++     + +      +ID + K 
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              + A+   + ++  G   N   Y  ++  L K+G ++ A N+F  ME
Sbjct: 697 RKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 169/372 (45%), Gaps = 1/372 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+ NI +  + K   +++   I       GV+PD  TY ++I A+ +           N+
Sbjct: 403 RVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQ 462

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLG 126
           M   G+ P+ + Y+SLI G   +  L  + +L+ EM+  GIP P++  +NS+++ L + G
Sbjct: 463 MIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEG 522

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA+ +F  +I     P   TFN +++G       + A  +   +   G  P++V+YN
Sbjct: 523 RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYN 582

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G C+ GR+     +  E+   G  P  ITY  I+   F + +     ++   M   
Sbjct: 583 TLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T D      ++    +     EA    +++    V+ +I   NT+I+   K  K E A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L D +   G   +  T+ ++I  L K G+++ A      M K G   +    N I+  
Sbjct: 703 KELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRV 762

Query: 367 LGKDGKIDHAIN 378
           L + G+I  A N
Sbjct: 763 LLEKGEIVKAGN 774



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 154/321 (47%), Gaps = 1/321 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC    L KA+ ++ + +  G+  P++V +N +I++ C+       + I + +   G  P
Sbjct: 482 FCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERP 541

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV+T+NSLI G      +  +  +LD M+  GI PDV SYN+L+    + G+ D+   +F
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M+   + P T T+ I+L+GL  +  T  A +M   + + G   ++ T  I++ GLC+ 
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                A  + K+LG      N     T++   ++ RK +   E+  ++   G   +   Y
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTY 721

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I   +K G ++EA +    M   G        N +I +  ++G++  A   + +++ 
Sbjct: 722 GVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDG 781

Query: 316 QGFECDKYTHTILIDGLCKAG 336
           +    +  T ++L+    + G
Sbjct: 782 KRISLEASTVSLLMALFSREG 802


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 206/443 (46%), Gaps = 44/443 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKA RL +AE +         +P    YN +I  Y     F+  Y +L++++E G 
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P VV++NS++    +   +  +L L + M +    P+  +YN ++  L   GK +EA  
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYM 412

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +  +M    L P   T NIM++ LCK +  + A  MF    + G  P  VTY  LI GL 
Sbjct: 413 IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLG 472

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD-- 251
           K G +  A  + + + D+GH  N + YT++++  F + + + G +I   M R+G   D  
Sbjct: 473 KKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLT 532

Query: 252 --------------------------GFG-------YCTVIAAFVKIGRLKEATDYMEQM 278
                                     G+G       Y  +I    K G+ +E +     M
Sbjct: 533 LLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM 592

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G  LD  +YN +++ +CK GKL+ AY +L+EM+ +       T+  +IDGL K   +
Sbjct: 593 KQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRL 652

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E     G + N+  Y+ ++D  GK G+ID A  + E M  K    + +T++S+
Sbjct: 653 DEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 712

Query: 395 VHNLCKAKRLPSASKLLLSCLKS 417
           +  L KA+ +  A    L C +S
Sbjct: 713 MDALVKAEEINEA----LICFQS 731



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 39/413 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A ++E+A  I  +    G+ P+++T N+++D  C+   F+  Y +     +
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ VTY SLI G  +   +  +  L + ML+ G   +   Y SL+   F  G+ ++
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKED 514

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            +++F++M      P     N  ++ + K    +    +F  ++ +GF+P++ +Y+ILI 
Sbjct: 515 GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG+ R                                       I  AMK++G+  
Sbjct: 575 GLTKAGQARETS-----------------------------------SIFHAMKQQGFAL 599

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  V+  F K G+L +A + +E+M    V   + +Y ++I+   K  +L+ AY+L 
Sbjct: 600 DARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLF 659

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E + +G E +   ++ LIDG  K G I  A L LE M K G   N+  +N ++D L K 
Sbjct: 660 EEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKA 719

Query: 371 GKIDHAINVFESM-EVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +I+ A+  F+SM E+K   +++TYS +++ LC+ ++   A        K G+
Sbjct: 720 EEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 772



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 208/481 (43%), Gaps = 40/481 (8%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V    +  RL+ AE +I    RL   P    Y +LI A  +    +    +L +M+E G 
Sbjct: 154 VSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGY 213

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
              V  + +L+    R   +  +L L+DE+    + PD+  YN  + C  + G  D A +
Sbjct: 214 EVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWK 273

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F ++    L P   ++  M+  LCK      A  +F  ++    VP    YN +I G  
Sbjct: 274 FFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYG 333

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            AG+   A  +L +L + G  P+ +++ +I+ C  + RK    L +  AMK+     +  
Sbjct: 334 SAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP-NSS 392

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I      G+++EA    ++M   G+  ++++ N +++  CK  K E AY + +  
Sbjct: 393 TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY------------- 360
            ++G   +  T+  LIDGL K GN+  A    E M   G ++N   Y             
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512

Query: 361 ----------------------NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
                                 N  +D + K G ++    +FE ++    + D  +YS +
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 572

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +H L KA +    S +  +  + G  +   A  AVVDG   SG   +A ++  ++++ ++
Sbjct: 573 IHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRV 632

Query: 455 S 455
            
Sbjct: 633 P 633



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 120/221 (54%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R  N  V  FCK+ +L+KA  ++ +     V P V TY  +ID   +    D  Y +
Sbjct: 599 LDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYML 658

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +  GI  +V+ Y+SLI G  +   +  +  +L+EM++ G+ P+V+++NSLM  L +
Sbjct: 659 FEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK 718

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M     +P T T++I++NGLC+ +  + A   ++ +QK G VP +VT
Sbjct: 719 AEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVT 778

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           Y  +I GL K G +  A  + +    +G  P+A ++  +++
Sbjct: 779 YTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIE 819



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 169/389 (43%), Gaps = 1/389 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F    R E    I  +  R G  PD+   N  +D   +    + G  I   ++  G  PD
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V +Y+ LI G T+      +  +   M + G   D  +YN+++    + GK D+A  V +
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P  AT+  +++GL K    D A  +F   +  G    ++ Y+ LI G  K G
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  IL+E+   G  PN  T+ ++M    +  +    L    +MK    + + + Y 
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    ++ +  +A  + ++M   G+  ++V+Y T+I    K G +  A  L +  +  
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKAN 805

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  +   LI+G+  A     A    E     G   N++A   ++D L K   ++ A
Sbjct: 806 GGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865

Query: 377 INV-FESMEVKDSFTYSSMVHNLCKAKRL 404
             V F    V+  F ++  +  L  A +L
Sbjct: 866 AVVGFGENTVRHFFQWTEGLDLLLSAGQL 894



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 44/380 (11%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            YN+++   + +  L+    +L+EM  L  G+P    +   L+  L +  + D+A RV  
Sbjct: 116 AYNAVLPFLSHD--LAAMEKVLEEMSVLGYGVPNPACA--DLVSALVRTRRLDDAERVIA 171

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P  + + +++  + + R  + AL + R +Q+ G+   +  +  L++ L + G
Sbjct: 172 AMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREG 231

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  ++ E+  S   P+ + Y   + C  +     +  +    +K +G   D   Y 
Sbjct: 232 RVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYT 291

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    K GRL EA +   QM T+       +YNT+I  Y   G+ E AY LLD+++++
Sbjct: 292 SMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER 351

Query: 317 G----------------------------------FECDKYTHTILIDGLCKAGNIKGAR 342
           G                                   E +  T+ I+ID LC AG ++ A 
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAY 411

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +  + M   G   NL   N +VDRL K  K + A  +FE+   +    +S TY S++  L
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471

Query: 399 CKAKRLPSASKLLLSCLKSG 418
            K   +  A +L  + L +G
Sbjct: 472 GKKGNVDDAYRLFENMLDTG 491



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 148/350 (42%), Gaps = 42/350 (12%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
            R  +I +    KA +  +  +I     + G   D   YN ++D +C+    D  Y +L 
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+   + P V TY S+I G  +   L  +  L +E    GI  +V  Y+SL+    ++G
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + DEA  + ++M+   LTP   T+N +++ L K    + AL  F+ +++    P   TY+
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ILI GLC+  +   A    +E+   G  PN +TYTT+                       
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTM----------------------- 782

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                       IA   K+G + +A    E+   +G   D  S+N LI       +   A
Sbjct: 783 ------------IAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEA 830

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           Y + +E   +G   +      L+D L KA  ++ A +       +GF  N
Sbjct: 831 YHVFEETRLKGCRINVKACISLLDALNKAECLEQAAV-------VGFGEN 873



 Score = 41.6 bits (96), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 41/83 (49%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   +I +   C+  +  KA     +  + G++P+VVTY  +I    +  +     ++ 
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799

Query: 66  NRMREAGISPDVVTYNSLIAGAT 88
            R +  G +PD  ++N+LI G +
Sbjct: 800 ERFKANGGTPDAASFNALIEGMS 822


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 5/362 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK      A+ +  + +  G+ P+V TYN +ID +C F  +     +L  M E  I+PD
Sbjct: 90  LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 149

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+T+N+LI+ + +   L  +  L DEML   I PD  +YNS+++   +  + D+A  +F 
Sbjct: 150 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 209

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M     +P   TFN +++  C+ +  D  +++ R + + G V    TYN LI G C+  
Sbjct: 210 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 265

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A+ + +E+   G  P+ IT   ++     N K +  LE+   ++      D   Y 
Sbjct: 266 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 325

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K  ++ EA D    +   GV+ D+ +YN +I+ +C +  +  A +L  +M+  
Sbjct: 326 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 385

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E D  T+  LI G  KAG I  +   +  M   GF  +      + D L  DG++D +
Sbjct: 386 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 444

Query: 377 IN 378
            +
Sbjct: 445 FS 446



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 8/406 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   R+ +A A++   +  G+  DVVTY  +++  C+     +   +L++M 
Sbjct: 13  FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 72

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  I PDVV Y+++I    ++   S +  L  EMLE GI P+V++YN ++      G+  
Sbjct: 73  ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 132

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DMI  ++ P   TFN +++   K      A ++   +      P+ VTYN +I
Sbjct: 133 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 192

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK  R   A    K + D   +P+ +T+ TI+    R ++   G+++L  + R+G  
Sbjct: 193 YGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 248

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F ++  L  A D  ++M++ GV  D ++ N L+  +C+  KLE A  L
Sbjct: 249 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 308

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + ++    + D   + I+I G+CK   +  A      +   G + +++ YN ++     
Sbjct: 309 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 368

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              I  A  +F  M+      D+ TY++++    KA  +  + +L+
Sbjct: 369 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 414



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 180/370 (48%), Gaps = 8/370 (2%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E G++P V+T+N+LI G      +  +  L+++M+  G+  DV +Y ++++ + ++G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A  +   M    + P    ++ +++ LCK+ +  +A  +F  + + G  P + TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I G C  GR   A+ +L+++ +    P+ +T+  ++    +  K     ++   M  + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y ++I  F K  R  +A    + M +     D+V++NT+I++YC+  +++   
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 236

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL E+ ++G   +  T+  LI G C+  N+  A+   + M   G   +    N ++   
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            ++ K++ A+ +FE +++     D+  Y+ ++H +CK  ++  A  L  S    GV    
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 424 SAQKAVVDGL 433
                ++ G 
Sbjct: 357 QTYNVMISGF 366



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 8/316 (2%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           LTP   TFN ++NGLC       A  +   +   G   ++VTY  ++ G+CK G  ++A 
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L ++ ++   P+ + Y+ I+    ++  +     + S M  KG   + F Y  +I  F
Sbjct: 66  NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
              GR  +A   +  M+   +  D++++N LI+   KEGKL  A  L DEM  +    D 
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  +I G CK      A+   + M       ++  +N I+D   +  ++D  + +   
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 241

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           +     V ++ TY++++H  C+   L +A  L    +  GV         ++ G   +  
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301

Query: 439 RREAKKIQSKIRMAKI 454
             EA ++   I+M+KI
Sbjct: 302 LEEALELFEVIQMSKI 317



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 109/210 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +C+A R+++   ++ +  R G++ +  TYN LI  +C+  + +A   +   M 
Sbjct: 219 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD +T N L+ G   N  L  +L+L + +    I  D  +YN ++H + +  K D
Sbjct: 279 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 338

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  +    + P   T+N+M++G C      +A  +F  ++ +G  P+  TYN LI
Sbjct: 339 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 398

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +G  KAG +  +  ++ E+  +G + +A T
Sbjct: 399 RGCLKAGEIDKSIELISEMRSNGFSGDAFT 428


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 203/405 (50%), Gaps = 9/405 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    N  +  F KA   +KA A+     + G+ PD  T+N+L++A+ +    D+ + +
Sbjct: 87  LTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M+    SP+V+TY+ LI    +   +  +L +  +M   G  P++++Y S++  L +
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK 206

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  D+A  +F++M    L      +N +++GL ++   D A ++FR +   G  P+ VT
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +  L+ GL  AGR   AR I +E  D G A +   Y  ++    ++++     EI   ++
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D + +  ++    K GR+ +A   +  M   G   D+  YNTLI+   K G++E
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  LL EM+  G+E D  T+  LID  CK G I+ A    E ++  GF +N   YN I+
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTIL 445

Query: 365 DRLGKDGKIDHAINVFESMEVK--------DSFTYSSMVHNLCKA 401
           + L   G++D A  +F  M+ +        D  TY+++++   +A
Sbjct: 446 NGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQA 490



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 176/376 (46%), Gaps = 49/376 (13%)

Query: 45  YNMLIDAYCQFVSFDAGYT-----ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           YN LIDA+ +     AGYT     +   M ++G+ PD  T+N L+    +   +     L
Sbjct: 92  YNSLIDAFVK-----AGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EM      P+V +Y+ L+  + + G  ++A +VF DM      P   T+  M++GL K
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK 206

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           + + D A  +F  +   G V   V YN LI GL ++GR   A  + +E+   G  P+ +T
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +T+++        Y LG+                            GR  EA    ++  
Sbjct: 267 FTSLV--------YGLGVA---------------------------GRASEARRIFQEAR 291

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G  LD+  YN LI+  CK  +L+ A+ +  E+E+ G   D YT   L+DGLCK+G I 
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A + L  M + G   ++  YN ++D L K G+++ A  +   M+      D  TY++++
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411

Query: 396 HNLCKAKRLPSASKLL 411
              CK  R+  A +L 
Sbjct: 412 DESCKGGRIEDALRLF 427



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 5/196 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L N+ + T CK+ RL++A  I  +    G++PDV T+N L+D  C+       + +
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M+ AG +PDV  YN+LI G  ++  +  +  LL EM  +G  PDV +YN+L+    +
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK 416

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH---GFV-P 180
            G+ ++A R+F+++        T T+N +LNGLC     D A ++F G+++    G + P
Sbjct: 417 GGRIEDALRLFEEISAKGFAN-TVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDP 475

Query: 181 ELVTYNILIKGLCKAG 196
           + VTY  L+ G  +AG
Sbjct: 476 DFVTYTTLLNGARQAG 491



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 4/218 (1%)

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +E L  M+          Y ++I AFVK G  ++A      M   G++ D  ++N L+N 
Sbjct: 74  VEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNA 133

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           + K  ++++ + L +EM+ Q    +  T++ILID +CK G ++ A      M   G   N
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPN 193

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           +  Y  ++D LGK G +D A  +FE M     V     Y+S++H L ++ R  +A+KL  
Sbjct: 194 IFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFR 253

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             L  G++       ++V GL  +G   EA++I  + R
Sbjct: 254 EMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+E A   + + I      + VTYN +++  C     D  Y + N M++
Sbjct: 408 NTLIDESCKGGRIEDA-LRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466

Query: 71  AG----ISPDVVTYNSLIAGATRNSL 92
                 I PD VTY +L+ GA +  L
Sbjct: 467 ETVDGVIDPDFVTYTTLLNGARQAGL 492


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 182/357 (50%), Gaps = 3/357 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            NI +  FCK  +L KA  +  +    GV P V TYN LID YC+       Y    +L 
Sbjct: 191 FNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLK 250

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M +AGISPDVVT+N LI G  +   ++ ++ +  EM + GIP +V +YNSL+  L + G
Sbjct: 251 EMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREG 310

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +++ ++ ++M    L    +T N +LNG CK      A     G+ + G  P ++TYN
Sbjct: 311 KVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYN 370

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G  + G+++ A      +   G +PN  TY  ++     +R ++    +L  MK K
Sbjct: 371 TLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEK 430

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I A    G +++A   +++MV  G++   V+YNT+IN +C++G  + A
Sbjct: 431 GVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGA 490

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + +   MEK+    +  T+ + +   CK G +  A + L  M + G   N   Y  I
Sbjct: 491 HEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEII 547



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 197/409 (48%), Gaps = 13/409 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N  +    +A+R++ A+      +R  V PD+ T+N++I  +C+         +   + 
Sbjct: 156 VNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKNIS 215

Query: 70  EAGISPDVVTYNSLIAGATRNSLLS--CSLD-LLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
             G++P V TYN+LI G  +   +     +D LL EM++ GI PDV ++N L++   +  
Sbjct: 216 AWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEP 275

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               A +VFQ+M    +     T+N +++GLC+    ++++++   +++ G    L T N
Sbjct: 276 NITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMN 335

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++ G CK G +  A   +  +   G  PN ITY T++    R  K K       AM  K
Sbjct: 336 SVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGK 395

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G + +   Y  +I  F      +  +  +++M   GV+ D+V+YN LI   C +G++  A
Sbjct: 396 GISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKA 455

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA---RLHLEYMNKIGFDSNLEAYNCI 363
             LLDEM + G E     +  +I+G C+ G+ +GA   RL +E   K    +N+  YN  
Sbjct: 456 VKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKK---RANVVTYNVF 512

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 408
           +    K GK+D A  V   M     V +  TY  +   + +   +P  S
Sbjct: 513 LKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDIS 561



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 190/387 (49%), Gaps = 7/387 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P   + N L+ A  +    D             +SPD+ T+N +I+G  +   L  + D+
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 100 LDEMLEMGIPPDVWSYNSLM--HC-LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              +   G+ P V +YN+L+  +C   Q+GK    + + ++MI   ++P   TFN+++NG
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK      A+++F+ +++ G    +VTYN L+ GLC+ G++  +  +++E+ + G A  
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T  +++    +          +  + ++G   +   Y T++  + ++G++KEA    +
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKD 390

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G+  ++ +YN LI  +       +   LLDEM+++G + D  T+ +LI  LC  G
Sbjct: 391 AMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKG 450

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            ++ A   L+ M ++G +    AYN I++   + G    A  +   ME +    +  TY+
Sbjct: 451 EVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYN 510

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGV 419
             +   CK  ++  A+ +L   L+ G+
Sbjct: 511 VFLKYFCKMGKMDEANVVLNEMLEKGL 537



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 121/252 (48%), Gaps = 18/252 (7%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +N  +  FCK   + +AE  + DGI + G+ P+V+TYN L+D Y +           + M
Sbjct: 334 MNSVLNGFCKKGMMVEAEGWV-DGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAM 392

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              GISP+V TYN LI G T +        LLDEM E G+  DV +YN L+  L   G+ 
Sbjct: 393 AGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEV 452

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A ++  +M+   L P    +N ++NG C+      A  +   ++K      +VTYN+ 
Sbjct: 453 RKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVF 512

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +K  CK G++  A  +L E+ + G  PN ITY  I                 S M  KGY
Sbjct: 513 LKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIIN----------------SGMIEKGY 556

Query: 249 TFDGFGYCTVIA 260
             D  GY   ++
Sbjct: 557 VPDISGYAADVS 568



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 172/351 (49%), Gaps = 9/351 (2%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P  +S N+L+  L +  + D A+R F+  +   ++P   TFNI+++G CK      A  +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 170 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            + +   G  P + TYN LI G CK    G++     +LKE+  +G +P+ +T+  ++  
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +       +++   M+++G   +   Y ++++   + G+++++   +E+M   G+   
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           + + N+++N +CK+G +  A   +D + ++G + +  T+  L+DG  + G +K A    +
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKD 390

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M   G   N++ YNC++              + + M+ K    D  TY+ ++  LC   
Sbjct: 391 AMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKG 450

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            +  A KLL   ++ G+     A   +++G    G  + A +I  ++RM K
Sbjct: 451 EVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEI--RLRMEK 499



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 3/229 (1%)

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
           C    P   + N +L  L +    D A R FR   +    P+L T+NI+I G CK G+LR
Sbjct: 146 CPRYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLR 205

Query: 200 TARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGL--EILSAMKRKGYTFDGFGYC 256
            A  + K +   G AP+  TY T++   C R +  K+     +L  M + G + D   + 
Sbjct: 206 KAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFN 265

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  + K   +  A    ++M   G+  ++V+YN+L++  C+EGK+E +  L++EME+ 
Sbjct: 266 VLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEEL 325

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           G  C   T   +++G CK G +  A   ++ + + G   N+  YN +VD
Sbjct: 326 GLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVD 374


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 194/416 (46%), Gaps = 6/416 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C+  + + A  ++      GV P  VTYN L++ YC+   + A   +++ M 
Sbjct: 178 FNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMA 237

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI  DV TYN  I    R+S  +    LL  M    + P+  +YN+L+    + GK +
Sbjct: 238 SKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIE 297

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A +VF +M   +L P + T+N ++ G C       ALR+   +  HG  P  VTY  L+
Sbjct: 298 VATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALL 357

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL K         IL+ +   G   + I+YT ++    +N   +  +++L  M +    
Sbjct: 358 NGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVN 417

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   +  +I  F ++G++  A + M +M   G+  + + Y+TLI  YCK G L+ A   
Sbjct: 418 PDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNA 477

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M   G   D +T  +L+   C+ G ++ A   + +M+++G D N   ++CI++  G 
Sbjct: 478 YAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGN 537

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGV 419
            G    A +VF+ M         FTY  ++  LC    +  A K    L C+ + V
Sbjct: 538 SGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAV 593



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 196/438 (44%), Gaps = 7/438 (1%)

Query: 18  CKANRL--EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           C  NR+  +  +   + G R G+ P V T NM++ +  +    D  ++    M   GI P
Sbjct: 115 CLRNRMVGDAVQTFYLMGFR-GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICP 173

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV T+N L+           +  LL +M E G+ P   +YN+L++   + G+   A+++ 
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M    +     T+N+ ++ LC++  +     + + ++++   P  +TYN LI G  + 
Sbjct: 234 DCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVRE 293

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  A  +  E+      PN+ITY T++            L ++  M   G   +   Y
Sbjct: 294 GKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTY 353

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++    K       +  +E+M   GV++  +SY  +I+  CK G LE A  LLD+M K
Sbjct: 354 GALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLK 413

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
                D  T ++LI+G  + G I  A+  +  M K G   N   Y+ ++    K G +  
Sbjct: 414 VSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKE 473

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+N +  M     V D FT + +V   C+  +L  A   +    + G+         +++
Sbjct: 474 ALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIIN 533

Query: 432 GLRHSGCRREAKKIQSKI 449
           G  +SG   +A  +  K+
Sbjct: 534 GYGNSGDALKAFSVFDKM 551



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 166/345 (48%), Gaps = 4/345 (1%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            ++ LI    RN ++  ++     M   G+ P V++ N ++  L +  K D     F+ M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   + P  ATFNI+LN LC+     NA  + R +++ G  P  VTYN L+   CK GR 
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  ++  +   G   +  TY   +    R+ +   G  +L  M+R     +   Y T+
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+ FV+ G+++ AT   ++M    +  + ++YNTLI  +C  G +  A  L+D M   G 
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             ++ T+  L++GL K          LE M   G   +  +Y  ++D L K+G ++ A+ 
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQ 406

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + + M       D  T+S +++   +  ++ +A +++    K+G+
Sbjct: 407 LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 203/452 (44%), Gaps = 5/452 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L +  +  +CK   L++A          G + D  T N+L+  +C++   +     +N M
Sbjct: 457 LYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ P+ VT++ +I G   +     +  + D+M   G  P +++Y  L+  L   G  
Sbjct: 517 SRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHI 576

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA + F  + C         FN  L   C++    +A+ +   +  + F+P+  TY  L
Sbjct: 577 NEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNL 636

Query: 189 IKGLCKAGRLRTARWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           I GLCK G++  A  +  +  + G  +PN   YT+++    ++   +  L I   M  K 
Sbjct: 637 IAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKD 696

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   +  +I  + + G+  +  D +  M +  +  ++ +YN L++ Y K   +   +
Sbjct: 697 VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCF 756

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +L  +M + GF  DK++   LI G C++ +   A   L ++   G   +   +N ++ + 
Sbjct: 757 MLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKF 816

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            +  ++  A  + + M     + +  TY+++ + L +      A ++L   L+SG     
Sbjct: 817 CERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTN 876

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                +++G+   G  + A K+Q +++   IS
Sbjct: 877 KQYITLINGMCRVGNIKGAMKLQDEMKTLGIS 908



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 198/424 (46%), Gaps = 8/424 (1%)

Query: 35   RLGVLP---DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
            RL  +P   D V +N  + + C+  +      ++N M      PD  TY +LIAG  +  
Sbjct: 585  RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKG 644

Query: 92   LLSCSLDLLDEMLEMGI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  +L L  + +E G+  P+   Y SL+  L + G    A  +F++M+  D+ P T  F
Sbjct: 645  KIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAF 704

Query: 151  NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
            N++++   +   T     +   ++       L TYNIL+ G  K   +     + K++  
Sbjct: 705  NVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIR 764

Query: 211  SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
             G  P+  ++ +++    +++ + + ++IL  +  +G+  D F +  +I  F +   +K+
Sbjct: 765  HGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKK 824

Query: 271  ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
            A + ++QM    V  ++ +YN L N   +      A+ +L  + + G       +  LI+
Sbjct: 825  AFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLIN 884

Query: 331  GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
            G+C+ GNIKGA    + M  +G  S+  A + IV  L    KI++AI V + M     + 
Sbjct: 885  GMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIP 944

Query: 387  DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
               T+++++H  CK   +  A +L        V++   A   ++ GL  +G    A K+ 
Sbjct: 945  TVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004

Query: 447  SKIR 450
             +++
Sbjct: 1005 EEMK 1008



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/443 (22%), Positives = 182/443 (41%), Gaps = 40/443 (9%)

Query: 9    LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            + N  + + C++  L  A A+I + +    LPD  TY  LI   C+     A   +  + 
Sbjct: 597  IFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKA 656

Query: 69   REAGI-SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
             E G+ SP+   Y SL+ G  ++     +L + +EML   + PD  ++N ++    + GK
Sbjct: 657  IEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGK 716

Query: 128  PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              + N +   M   +L    AT+NI+L+G  K         +++ + +HGF+P+  +++ 
Sbjct: 717  TSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHS 776

Query: 188  LIKGLCKAGRLRTARWILKELGDSGHA--------------------------------- 214
            LI G C++     A  IL+ +   GH                                  
Sbjct: 777  LILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFM 836

Query: 215  --PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              PN  TY  +     R   +     +L  +   G       Y T+I    ++G +K A 
Sbjct: 837  VIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAM 896

Query: 273  DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               ++M T G+    V+ + ++       K+E A  +LD M +        T T L+   
Sbjct: 897  KLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVY 956

Query: 333  CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYS 392
            CK  N+  A      M       ++ AYN ++  L  +G I+ A  ++E M+ +D +  +
Sbjct: 957  CKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNT 1016

Query: 393  S----MVHNLCKAKRLPSASKLL 411
            S    ++ + C       + KLL
Sbjct: 1017 SIYIVLIDSFCAGNYQIESEKLL 1039



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 175/400 (43%), Gaps = 5/400 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   LE+A  ++ D +++ V PDVVT+++LI+ + +    +    I+ +M + G+ P+
Sbjct: 395 LCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            + Y++LI    +   L  +L+    M   G   D ++ N L+    + GK +EA     
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P + TF+ ++NG   +     A  +F  +   G  P L TY  L+KGLC  G
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A      L    +A + + + T +    R+      + +++ M    +  D F Y 
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            +IA   K G++  A     + +  G +  +   Y +L++   K G   AA  + +EM  
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +  E D     ++ID   + G        L  M       NL  YN ++    K   +  
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +++ M     + D F++ S++   C++K    A K+L
Sbjct: 755 CFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKIL 794



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 117/282 (41%), Gaps = 41/282 (14%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   +  +++ C RNR     ++    M  +G     +    V+ + VK  ++     + 
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M+  G+  D+ ++N L+N  C+ GK + A  LL +ME+ G      T+  L++  CK 
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD------------------------- 370
           G  K A   ++ M   G   ++  YN  +D L +D                         
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITY 283

Query: 371 ----------GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
                     GKI+ A  VF+ M     + +S TY++++   C    +  A +L+   + 
Sbjct: 284 NTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVS 343

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA--KISH 456
            G+R  +    A+++GL  +        I  ++RM   ++SH
Sbjct: 344 HGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 188/390 (48%), Gaps = 6/390 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           RL  LP +   N ++D   +       + + + M   G+ P VVTYN+LI        ++
Sbjct: 136 RLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVA 195

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++ D+M+   I P+V +Y S++  L + G   +A R+F  M    + P   T+N+++
Sbjct: 196 KAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLM 255

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G C+    ++A  +++ L   G +P  V +  LI G CKA R   A+ + +++   G A
Sbjct: 256 SGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVA 315

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P    Y ++M   FR+   +  L +   M R G   D F    V+      G+++ A  +
Sbjct: 316 PTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARF 375

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +E +  DGV L+  +YN LI+ YC+ G LE A      M + G E +  +++ LIDG  K
Sbjct: 376 LEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSK 435

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G ++ A      M   G + N+  Y  ++    K+G ID A    + M       ++ T
Sbjct: 436 LGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAIT 495

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            S +V  LC+  R+  A + ++    SG++
Sbjct: 496 VSVLVDGLCRENRVQDAVRFVME--HSGIK 523



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 189/382 (49%), Gaps = 15/382 (3%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA-GYTILNRMREAGISPDV 77
           KA R   A  +  + +R G++P VVTYN LI+A C++    A    + ++M    I P+V
Sbjct: 155 KARRSRCAWELFDEMLRRGMVPSVVTYNTLINA-CRYQGAVAKAQEMWDQMVARQIDPNV 213

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVF 135
           +TY S+I        +  +  L D M E G+ P+ ++YN LM  HC     + D+ N  F
Sbjct: 214 ITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHC-----QGDDVNSAF 268

Query: 136 ---QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
              Q+++   L P    F  +++G CK +    A  MFR + + G  P +  YN L+ G 
Sbjct: 269 VLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGA 328

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            ++G  + A  + +E+   G  P+  T + +++      + ++    L  ++  G   + 
Sbjct: 329 FRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNA 388

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I  + + G L+EA     +M   GV+ ++VSY++LI+ + K GK++ A  +  E
Sbjct: 389 AAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTE 448

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M  +G E +  T+T LI G  K G I  A R H E M + G   N    + +VD L ++ 
Sbjct: 449 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKE-MIENGISPNAITVSVLVDGLCREN 507

Query: 372 KIDHAIN-VFESMEVKDSFTYS 392
           ++  A+  V E   +K S  +S
Sbjct: 508 RVQDAVRFVMEHSGIKYSDIHS 529



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 190/431 (44%), Gaps = 56/431 (12%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+   +  AE +       G+ P+  TYN+L+  +CQ    ++ + +   +  +G+
Sbjct: 220 ICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGL 279

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ V + +LI G  +    S + D+  +M   G+ P V  YNSLM   F+ G   EA  
Sbjct: 280 IPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALS 339

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           ++Q+M    L P   T +I++ GLC       A R   G+++ G       YN LI   C
Sbjct: 340 LYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYC 399

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           + G L  A      + + G  PN ++Y++++                          DG 
Sbjct: 400 RNGNLEEALATCTRMTEVGVEPNVVSYSSLI--------------------------DGH 433

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
                     K+G+++ A     +MV  G++ ++V+Y  LI+ + K G ++AA+    EM
Sbjct: 434 S---------KLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEM 484

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLE-----YMNKIGFDSNLEA-------- 359
            + G   +  T ++L+DGLC+   ++ A R  +E     Y +   F SN           
Sbjct: 485 IENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPN 544

Query: 360 ---YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              Y  ++  L  DG+   A  +F  M     + DSFTY+ ++   C    + +A  L  
Sbjct: 545 SAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYA 604

Query: 413 SCLKSGVRILK 423
             +K GV+ ++
Sbjct: 605 DMMKIGVKPMR 615



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 197/409 (48%), Gaps = 15/409 (3%)

Query: 47  MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           +L+ A  Q    D    +  R+      P +   N+++ G  +     C+ +L DEML  
Sbjct: 116 VLVIALSQMGLLDEALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEMLRR 172

Query: 107 GIPPDVWSYNSLMH-CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           G+ P V +YN+L++ C +Q G   +A  ++  M+   + P   T+  M+  LC+     +
Sbjct: 173 GMVPSVVTYNTLINACRYQ-GAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGD 231

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A R+F  +++ G  P   TYN+L+ G C+   + +A  + +EL +SG  PNA+ +TT++ 
Sbjct: 232 AERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLID 291

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              + +++    ++   M R G       Y +++    + G  +EA    ++M   G+  
Sbjct: 292 GFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCP 351

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D  + + ++   C  G+++ A   L+ + + G   +   +  LID  C+ GN++ A    
Sbjct: 352 DEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATC 411

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             M ++G + N+ +Y+ ++D   K GK+  A+ ++  M  K    +  TY++++H   K 
Sbjct: 412 TRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 471

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             + +A +     +++G+         +VDGL    CR    ++Q  +R
Sbjct: 472 GGIDAAFRFHKEMIENGISPNAITVSVLVDGL----CRE--NRVQDAVR 514



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 21/361 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+ + +  A  +  + +  G++P+ V +  LID +C+   F     +   M  
Sbjct: 252 NVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPR 311

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P V  YNSL+ GA R+     +L L  EM  +G+ PD ++ + ++  L   G+   
Sbjct: 312 FGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQV 371

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R  + +    +    A +N +++  C+N   + AL     + + G  P +V+Y+ LI 
Sbjct: 372 AARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLID 431

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G+++ A  I  E+   G  PN +TYT ++    +N            M   G + 
Sbjct: 432 GHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISP 491

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVS------------------YN 291
           +      ++    +  R+++A  ++  M   G++  DI S                  Y 
Sbjct: 492 NAITVSVLVDGLCRENRVQDAVRFV--MEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYM 549

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           TLI     +G+   A  L   M K G   D +T+T+LI G C  G +  A +    M KI
Sbjct: 550 TLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 609

Query: 352 G 352
           G
Sbjct: 610 G 610



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 8/303 (2%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           +P  A   +++  L +    D AL +FR L     +P L   N ++ GL KA R R A  
Sbjct: 109 SPAPA-LGVLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWE 164

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +  E+   G  P+ +TY T++  C          E+   M  +    +   Y ++I    
Sbjct: 165 LFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLC 224

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           + G + +A    + M   G++ +  +YN L++ +C+   + +A++L  E+   G   +  
Sbjct: 225 EEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAV 284

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             T LIDG CKA     A+     M + G    +  YN ++D   + G    A+++++ M
Sbjct: 285 VFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344

Query: 384 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
                  D FT S +V  LC   ++  A++ L    + GV +  +A  A++D    +G  
Sbjct: 345 TRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNL 404

Query: 440 REA 442
            EA
Sbjct: 405 EEA 407



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 17/228 (7%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    N  +  +C+   LE+A A       +GV P+VV+Y+ LID + +         I
Sbjct: 386 LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAI 445

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M   GI P+VVTY +LI G  +N  +  +     EM+E GI P+  + + L+  L +
Sbjct: 446 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCR 505

Query: 125 LGKPDEANR---------------VFQDMICGD--LTPCTATFNIMLNGLCKNRYTDNAL 167
             +  +A R                F +    +  L P +A +  ++ GL  +     A 
Sbjct: 506 ENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAG 565

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           ++F  ++K G + +  TY +LI+G C  G +  A  +  ++   G  P
Sbjct: 566 KLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 218/446 (48%), Gaps = 22/446 (4%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G+L TRL        C+  +  +   +  + I+LG + +    N L+    +  +F+   
Sbjct: 274 GRLITRL--------CRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMN 325

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--------LEMGIPPDVWS 114
            ++ +M E  I P+VVT+  LI    +   +  +L++L++M        + + + PDV  
Sbjct: 326 ELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVI 385

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           YN+L+  L ++G+  E   + + M       P T T+N +++G CK    +    +F  +
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM 445

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            K G  P +VT N L+ G+C+ GR+ +A     E    G   +A+TYT ++        +
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNF 505

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +  +E+ + M + G + D   Y T+I+ F + GR+ +A+  + ++   G++ D V YNTL
Sbjct: 506 EKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I  +C+  K    + +L EME+ G + D  T+  LI    K G++K A+  +  M K G 
Sbjct: 566 IGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGV 625

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKAKRLPSAS 408
              +  Y  +++    +G  + A+ +F+ M+       ++  Y+ ++++LCK  ++ SA 
Sbjct: 626 VPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAV 685

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLR 434
            L+      GV    +   A+  GLR
Sbjct: 686 SLMEDMKIWGVTPNTTTYNAIFKGLR 711



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 178/383 (46%), Gaps = 13/383 (3%)

Query: 12  ICVCTFCKANRLEKAEAII--------IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           I +   CK  R++ A  ++          GI + V PDVV YN LID  C+      G  
Sbjct: 345 ILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLG 404

Query: 64  ILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           ++ RMR + G +PD +TYN LI G  +   +    +L DEM + G+ P+V + N+L+  +
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G+   A   F +     +     T+  ++N  C     + A+ +F  + K G  P+ 
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDA 524

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           + Y  LI G  +AGR+  A ++L EL   G  P+ + Y T++    R  K+    E+L  
Sbjct: 525 IVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKE 584

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M+  G   D   Y T+IA   K G LK A   M +M+  GV   + +Y  +IN YC  G 
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644

Query: 303 LEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
              A  +  +M+       +   + ILI+ LCK   +K A   +E M   G   N   YN
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704

Query: 362 CIVDRLGKDGKIDHAINVFESME 384
            I   L  +  ++    VFE M+
Sbjct: 705 AIFKGLRDEKDLEK---VFEFMD 724



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 13/412 (3%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           + +S D    ++ +  E G+         LI    RN   +   DL  EM+++G   +  
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESA 306

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR-- 171
           + NSL+  L + G  +  N + + M+  D+ P   TF I++N +CK R  D+AL +    
Sbjct: 307 ACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKM 366

Query: 172 -GLQKHGFV-----PELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIM 224
            G ++ G +     P++V YN LI GLCK GR +    +++ +    G AP+ ITY  ++
Sbjct: 367 SGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI 426

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  + + G E+   M ++G   +     T++    + GR+  A ++  +    G++
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D V+Y  LIN +C     E A  L +EM K G   D   +  LI G  +AG +  A   
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 400
           L  + K+G   +   YN ++    +  K      + + ME      D+ TY++++    K
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
              L  A K++   +K+GV    +   AV++    +G   EA +I   ++ A
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAA 658



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 1/324 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA  +EK + +  +  + GV P+VVT N L+   C+     +        +  G+  D
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY +LI      +    +++L +EML+ G  PD   Y +L+    Q G+  +A+ V  
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++    + P T  +N ++ G C+         M + +++ G  P+ +TYN LI    K G
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGY 255
            L+ A+ +++++  +G  P   TY  ++     N      +EI   MK       +   Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I +  K  ++K A   ME M   GV  +  +YN +      E  LE  +  +D M +
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728

Query: 316 QGFECDKYTHTILIDGLCKAGNIK 339
                D  T  IL + L   G I+
Sbjct: 729 HACNPDYITMEILTEWLSAVGEIE 752



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  F +A R+  A  ++ +  +LG+ PD V YN LI  +C+   F   + +L  M EAG+
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGL 590

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD +TYN+LIA A++N  L  +  ++ +M++ G+ P V +Y ++++     G  +EA  
Sbjct: 591 KPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAME 650

Query: 134 VFQDM-------------------ICGD-----------------LTPCTATFNIMLNGL 157
           +F+DM                   +C +                 +TP T T+N +  GL
Sbjct: 651 IFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              +  +        + +H   P+ +T  IL + L   G + 
Sbjct: 711 RDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 211/481 (43%), Gaps = 83/481 (17%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIID------GIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           R  N  +  F +A R   A+A          G R+   P++ TYN+++ + C     D  
Sbjct: 120 RSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIA--PNLQTYNIVLRSLCARGDLDRA 177

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            T+ + +R   ++PD +TY++L+ G  +   L  +LDLLDEM   G+ PDV  YN+L+  
Sbjct: 178 VTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGG 237

Query: 122 LFQLG------------------KPD------------------EANRVFQDMICGDLTP 145
            F+ G                  +P+                  E   V++ M+  +L P
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-------- 197
              T+ I+++GLC++   D A R++  + K G V +   YN L+KG C+AGR        
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357

Query: 198 ----------LRTARWILKELGDSGHA-----------------PNAITYTTIMKCCFRN 230
                     LRT   ++K L DSG                   P+ +T+ T++    +N
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                   I    +  G   D F Y ++I     +GRL +A    E+M  DG + +   Y
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N LI+ +C+  +   A  +  +M   G      T+  LIDGLCKA   + A      M +
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            GF  ++  Y  ++  L  D KID A+++++ +  K    D   ++ ++H LC A ++  
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDE 597

Query: 407 A 407
           A
Sbjct: 598 A 598



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 172/391 (43%), Gaps = 50/391 (12%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 161
           +G  P + S+N+L+    +  +  +A+  F  +  G     + P   T+NI+L  LC   
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A+ +F  L++    P+ +TY+ L+ GL K  RL  A  +L E+  SG  P+ + Y 
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232

Query: 222 TIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            ++  CF+  +++  + +   + K  G   +   Y  ++    K GR KE  +  E+MV 
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           + +Q D+++Y  LI+  C+ G ++ A  +  E+ K G   D   +  L+ G C+AG ++ 
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352

Query: 341 ARLHLEYMNKIGFDS--NLEAYNCIVDRLGKDGKIDHAI--------------------- 377
           A    ++ +  GF    NL  YN ++  L   G +D AI                     
Sbjct: 353 A---WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409

Query: 378 ---------------NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                           +FE   V     D F+YSSM++ LC   RL  A K+     K G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +       A++ G        +A +I SK+
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 182/368 (49%), Gaps = 5/368 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V  FC+A R+++A     D      L ++ TYN++I         D    + + +
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 69  -REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            ++    PD VT+ +LI G  +N   + +  + +E    G   DV+SY+S+++ L  +G+
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A +V++ M      P +  +N +++G C+   T +A+R++  +  +G  P ++TYN 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCKA + + A  + +E+ ++G  P+  TY ++++  F ++K    L I   +  KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAA 306
              D   +  +I      G++ EA      M        ++V+YNTL++   + G ++ A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 365
             L   + + G E D  ++   I GLC    I +G +L  E +++ G    +  +N +V 
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR-GIIPTVITWNILVR 693

Query: 366 RLGKDGKI 373
            + K G I
Sbjct: 694 AVIKYGPI 701



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 183/375 (48%), Gaps = 5/375 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   C++  ++ A  +  + I+ G++ D   YN L+  +CQ       +   +    A
Sbjct: 304 ILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP--PDVWSYNSLMHCLFQLGKPD 129
           G+  ++ TYN +I G   + ++  +++L D +LE  +   PD  ++ +L+H L Q G  +
Sbjct: 364 GLR-NLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F++           +++ M+NGLC      +A++++  + K G  P    YN LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+  R   A  I  ++ D+G +P  ITY T++    +  KY+    +   M   G+T
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYL 308
            D   Y ++I       ++ +A    +Q++  G+++D++ +N LI+  C  GK+ EA ++
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             D  EK+    +  T+  L+DGL + G I  A      + + G + ++ +YN  +  L 
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 369 KDGKIDHAINVFESM 383
              +I   I + + +
Sbjct: 662 SCDRIHEGIQLLDEV 676



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ + N  +  FC+  R   A  I       G  P V+TYN LID  C+   +    +
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M E G +PD+ TY SLI G   +  +  +L +  ++L  G+  DV  +N L+H L 
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590

Query: 124 QLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             GK DEA  VF DM    +  P   T+N +++GL +  Y D A  ++  + + G  P++
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDI 650

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           ++YN  IKGLC   R+     +L E+   G  P  IT+  +++   +
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 204/419 (48%), Gaps = 4/419 (0%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           + N ++ A  +    +  G+ P VVTYN ++D++C+         +L +M+  G SP+ V
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDV 238

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TYN L+ G + +  +  + +L+ +ML +G+   V++Y+ L+    + G+ +EA+R+ ++M
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +     P   T+N ++ GLCK     +A ++   +     +P+LV+YN LI G  + G +
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  EL     AP+ +TY T++    R     + + +   M + G   D F + T 
Sbjct: 359 GEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF 418

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +  F K+G L  A +  ++M+  G+Q D  +Y T I    K G    A+ + +EM  +GF
Sbjct: 419 VRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  T+ + IDGL K GN+K A   ++ M   G   +   Y  I+      G +  A  
Sbjct: 479 PPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARA 538

Query: 379 VFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +F  M  K  F    TY+ ++H+     RL  A        + GV        A+++GL
Sbjct: 539 LFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 199/416 (47%), Gaps = 5/416 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNR 67
           +L++ +  + K + LEK   +    +  G+LPDV   N ++     +  + D    + N 
Sbjct: 133 ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNV 192

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M E GI P VVTYN+++    +  ++  +L LL +M  MG  P+  +YN L++ L   G+
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            ++A  + QDM+   L     T++ ++ G C+    + A R+   +   G VP +VTYN 
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++ GLCK GR+  AR +L  + +    P+ ++Y T++    R         + + ++ + 
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y T+I    ++G L  A    ++M+  G   D+ ++ T +  +CK G L  A 
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L DEM  +G + D++ +   I G  K G+   A    E M   GF  +L  YN  +D L
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            K G +  A  + + M     V D  TY+S++H    A  L  A  L L  L  G+
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGI 548



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 189/404 (46%), Gaps = 41/404 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+  ++E+A  +  + +  G +P VVTYN ++   C++        +L+ M    + PD
Sbjct: 282 YCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 341

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V+YN+LI G TR   +  +  L  E+    + P V +YN+L+  L +LG  D A R+  
Sbjct: 342 LVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKD 401

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQK---------------- 175
           +MI     P   TF   + G CK      A  +F     RGLQ                 
Sbjct: 402 EMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 461

Query: 176 --------------HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
                          GF P+L+TYN+ I GL K G L+ A  ++K++  +G  P+ +TYT
Sbjct: 462 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 521

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           +I+         +    +   M  KG       Y  +I ++   GRLK A  +  +M   
Sbjct: 522 SIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 581

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           GV  ++++YN LIN  CK  K++ AY    EM+ +G   +KYT+TILI+  C  G+ + A
Sbjct: 582 GVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEA 641

Query: 342 -RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            RL+     K   D  ++  +C    L K    D+ ++V   +E
Sbjct: 642 LRLY-----KDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLE 680



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 7/313 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F +L  R L   V T+       C+   L+ A  +  + I+ G  PDV T+   +  +C
Sbjct: 364 LFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC 423

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +  +      + + M   G+ PD   Y + I G  +    S +  + +EML  G PPD+ 
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 483

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN  +  L +LG   EA+ + + M+   L P   T+  +++      +   A  +F  +
Sbjct: 484 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEM 543

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P +VTY +LI      GRL+ A     E+ + G  PN ITY  ++    + RK 
Sbjct: 544 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 603

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                  + M+ KG + + + Y  +I     +G  +EA    + M+   +Q D  ++ +L
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSL 663

Query: 294 INLYCKEGKLEAA 306
           +    K+ KL   
Sbjct: 664 LKHLNKDYKLHVV 676



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    K   L++A  ++   +  G++PD VTY  +I A+           +   M  
Sbjct: 486 NVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLS 545

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P VVTY  LI        L  ++    EM E G+ P+V +YN+L++ L ++ K D+
Sbjct: 546 KGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQ 605

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M    ++P   T+ I++N  C   +   ALR+++ +      P+  T+  L+K
Sbjct: 606 AYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK 665

Query: 191 GLCKAGRLRTAR 202
            L K  +L   R
Sbjct: 666 HLNKDYKLHVVR 677


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 211/433 (48%), Gaps = 28/433 (6%)

Query: 11  NICVCTFCKANRLEKAEAIII---------DGIRL-------GVLPDVVTYNMLIDAYCQ 54
           N  +   CKA  ++KAEA++          + +RL       G+ PDVVTY++LID YC+
Sbjct: 178 NSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCK 237

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVW 113
                    I + M   G +PD  TY +L+ G AT+ +L+    DLL  M++ GIP +  
Sbjct: 238 IGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMH-DLLALMIQDGIPLEDH 296

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            +N L+    +    D+A   F +M     +P   T+  +++ LCK    ++A+  F  +
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P+++T+  LI GLC  G  +    +  E+ + G  PNAI   TIM    +  + 
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
               +    +   G   D   Y  +I  +   G++ E+   + +MV+ G++ D V+Y+ L
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-- 351
           +N YCK G+++ A  L  EM  +  + +  T+ I++ GL  AG +  AR   E+  KI  
Sbjct: 477 LNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAR---EFYMKIVD 533

Query: 352 -GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            G    +  YN ++  L ++  +D A+ +F+ +  K    +  T++ M+  L K  R+  
Sbjct: 534 SGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGD 593

Query: 407 ASKLLLSCLKSGV 419
           A  L  + L SG+
Sbjct: 594 AKSLFSAILPSGL 606



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 214/460 (46%), Gaps = 55/460 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    K   ++KA  +  + +  G  P++VTYN +ID  C+  + D    +L +M +
Sbjct: 143 NMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFD 202

Query: 71  ----------------AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
                            G+ PDVVTY+ LI    +    + + ++ D M+  G  PD ++
Sbjct: 203 KGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYT 262

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y +L+H     G   + + +   MI   +      FNI++    KN   D A+  F  ++
Sbjct: 263 YRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           + GF P +VTY  +I  LCKAGR+  A     ++   G +P+ IT+T+++       ++K
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWK 382

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++   M  +G   +     T++ +  K GR+ EA D+ +Q++  GV+ D+VSY  LI
Sbjct: 383 KVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILI 442

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           + YC +GK++ +  LL  M   G   D  T++ L++G C                     
Sbjct: 443 DGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYC--------------------- 481

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 410
                         K+G++D A+ ++  M  KD    + TY+ ++H L  A R+ +A + 
Sbjct: 482 --------------KNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREF 527

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +  + SG+++  +    V+ GL  +    EA ++   +R
Sbjct: 528 YMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLR 567



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 142/270 (52%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
            LN  + + CK  R+ +A       I +GV PDVV+Y +LID YC     D    +L RM
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G+ PD VTY++L+ G  +N  +  +L L  EM    + P+  +YN ++H LF  G+ 
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A   +  ++   +     T+NI+L GLC+N + D ALRMF+GL+   F  E+ T+NI+
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GL K GR+  A+ +   +  SG  P+AI Y  +++        +   E+  +M++ G 
Sbjct: 582 IVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGC 641

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T +      ++   ++ G ++ A  Y+ ++
Sbjct: 642 TANSRTLNAIVRKLLEKGDVRRAGTYLTKI 671



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 174/381 (45%), Gaps = 35/381 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   + NI +  + K   L+KA    I+  + G  P+VVTY  +ID  C+    +   + 
Sbjct: 293 LEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSH 352

Query: 65  LNRMREAGISPDVVTYNSLIAGATR--------------------------NSLLSC--- 95
            ++M   G+SPD++T+ SLI G                             N+++     
Sbjct: 353 FSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCK 412

Query: 96  ------SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 + D  D+++ +G+ PDV SY  L+      GK DE+ ++   M+   L P   T
Sbjct: 413 EGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVT 472

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           ++ +LNG CKN   D+AL ++R +      P  +TYNI++ GL  AGR+  AR    ++ 
Sbjct: 473 YSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV 532

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           DSG      TY  ++     N      L +   ++ K +  +   +  +I   +K+GR+ 
Sbjct: 533 DSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIG 592

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A      ++  G+  D + Y  +I  + +EG LE +  L   MEK G   +  T   ++
Sbjct: 593 DAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIV 652

Query: 330 DGLCKAGNIKGARLHLEYMNK 350
             L + G+++ A  +L  +++
Sbjct: 653 RKLLEKGDVRRAGTYLTKIDE 673



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 178/376 (47%), Gaps = 8/376 (2%)

Query: 29  IIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           +I DGI L    +   +N+LI AY +  + D   T    MR+ G SP+VVTY ++I    
Sbjct: 286 MIQDGIPL----EDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILC 341

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           +   +  ++    +M+  G+ PD+ ++ SL+H L  +G+  +  ++  +MI   + P   
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAI 401

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
             N +++ LCK      A   F  +   G  P++V+Y ILI G C  G++  +  +L  +
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  P+ +TY+ ++    +N +    L +   M  K    +   Y  ++      GR+
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
             A ++  ++V  G+QL I +YN ++   C+   ++ A  +   +  + F+ +  T  I+
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           I GL K G I  A+     +   G   +   Y  ++    ++G ++ +  +F SME    
Sbjct: 582 IVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGC 641

Query: 385 VKDSFTYSSMVHNLCK 400
             +S T +++V  L +
Sbjct: 642 TANSRTLNAIVRKLLE 657



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 175/389 (44%), Gaps = 33/389 (8%)

Query: 94  SCSLDLLDEMLEMGI---PPDVWSYNSLMHCL-------FQLGKPDEANRVFQDMICGD- 142
           + ++ L + M ++G+     D  ++  L+ C        F L +    +R    M+  D 
Sbjct: 73  ALAVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDG 132

Query: 143 --LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA----- 195
               P   ++N+++NGL K    D A  +F  +   GF P +VTYN +I GLCKA     
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192

Query: 196 -----------GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
                      G+L  A  +LK++   G  P+ +TY+ ++    +  +      I  +M 
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           R+G   D + Y T++  +   G L +  D +  M+ DG+ L+   +N LI  Y K   L+
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A     EM ++GF  +  T+T +ID LCKAG ++ A  H   M   G   ++  +  ++
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372

Query: 365 DRL---GKDGKIDH-AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L   G+  K++  +  +       ++   ++++ +LCK  R+  A       +  GV+
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
               +   ++DG    G   E+ K+  ++
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRM 461



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/224 (20%), Positives = 103/224 (45%), Gaps = 1/224 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  R++ A A+  +     V P+ +TYN+++          A      ++ ++GI   
Sbjct: 480 YCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLG 539

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN ++ G   NS +  +L +   +       +V ++N ++  L ++G+  +A  +F 
Sbjct: 540 INTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFS 599

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            ++   L P    + +M+    +    + +  +F  ++K+G      T N +++ L + G
Sbjct: 600 AILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKG 659

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +R A   L ++ +  ++  A T   ++      RKY+  ++ L
Sbjct: 660 DVRRAGTYLTKIDEKEYSVEAST-AVLLISIVSERKYQKEVKFL 702


>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
          Length = 975

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 182/373 (48%), Gaps = 4/373 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            K ++   NI VC  CK  +L+ A A+  D I LG    ++ +N LI   C     + GY
Sbjct: 436 AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGY 495

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            I N+M++ G++P   TYNSL  G  R      +LDLL EM   G PP + +   ++  L
Sbjct: 496 GIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQL 555

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              G+  EA +    M+     P   T++  +NG+C     D+AL +FR +    ++P++
Sbjct: 556 CFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDV 615

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V +NILI G  K+ +L  A+ I++E+ + G  P+ +TY  ++  C +  + +  +  L  
Sbjct: 616 VAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDK 675

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  +        Y ++I  F   GR  EA     +M   G   + ++Y   IN   K G+
Sbjct: 676 MVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGR 735

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYN 361
           +E A    +EM  +GFE D ++    I+ L   G+ +KG  L  E + K  + +NL+   
Sbjct: 736 IETALTYFEEMVTKGFELDTFSLLYFINFLISNGHPMKGCELLKEVLQKDTYGNNLKMVG 795

Query: 362 CI---VDRLGKDG 371
            I   V  L KDG
Sbjct: 796 LINEAVVELSKDG 808



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 211/459 (45%), Gaps = 26/459 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS + L++ V  F K  R++KA  +    +  G + D+  Y++LI+  CQ         
Sbjct: 277 RLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVK 336

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCL 122
           +   M+ +G++PDV     +I    R    +     ++E  E +     V  YN ++  L
Sbjct: 337 LFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEEL 396

Query: 123 FQLGKPDEANRVFQDMICG-------------------DLTPCTATFNIMLNGLCKNRYT 163
              G+ + A ++ + M+CG                   D  P + +FNI++ GLCK +  
Sbjct: 397 VHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL 456

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D AL + + +   G   +++ +N LI  LC   RL     I  ++ D G  P+  TY ++
Sbjct: 457 DMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSL 516

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT-VIAAFVKIGRLKEATDYMEQMVTDG 282
                R +  K  L++L  M+  G+       CT ++      GR+ EA  +++ M+  G
Sbjct: 517 FYGICRRKYPKAALDLLREMQTNGHP-PWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DIV+Y+  +N  C  G+++ A  L  ++  + +  D   H ILI+G  K+  +  A+
Sbjct: 576 FLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQ 635

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNL 398
             +E M + G   ++  YN ++D   K G+I+ AI+  + M  ++      TY+S++   
Sbjct: 636 KIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGF 695

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           C A R   A KL     + G      A  A ++GLR  G
Sbjct: 696 CSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCG 734



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 182/481 (37%), Gaps = 74/481 (15%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLL 93
            G  P+  TYN L+DA  +    D     L  M  R    S D  T  SL+         
Sbjct: 168 FGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRP 227

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             + D+   M E+G   D     +LM    + GK D A  +   M    +     T +++
Sbjct: 228 DDANDVFQRMSELGWV-DEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVL 286

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G  K    D A+ MF  +  +GFV +L  Y++LI+GLC+   +  A  + KE+  SG 
Sbjct: 287 VHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGV 346

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRL 268
           AP+      +++   R   +     ++     +   +   G     Y  V+   V  G +
Sbjct: 347 APDVRLLKKVIEAFCREGDFA----VIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEV 402

Query: 269 KEATDYMEQMVTDG--VQLDIV-----------------SYNTLINLYCKEGK------- 302
           + A   +  MV  G  V  D+                  S+N ++   CK  K       
Sbjct: 403 EAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALAL 462

Query: 303 ----------------------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                                       LE  Y + ++M+  G    ++T+  L  G+C+
Sbjct: 463 TKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICR 522

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
               K A   L  M   G    ++    +V +L   G++  A+   + M     + D  T
Sbjct: 523 RKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVT 582

Query: 391 YSSMVHNLCKAKRLPSASKLL--LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           YS+ ++ +C    +  A  L   +SC      ++  A   +++G R S    EA+KI  +
Sbjct: 583 YSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVV--AHNILINGFRKSSKLDEAQKIMEE 640

Query: 449 I 449
           +
Sbjct: 641 M 641



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 9/272 (3%)

Query: 118 LMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           L+ CL   G PD A R F         TP + T+N +L+ L K    D+A    R +   
Sbjct: 144 LLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVAR 203

Query: 177 ---GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G V +  T   L++  C AGR   A  + + + + G     +  TT+M    +  K 
Sbjct: 204 CGDGSV-DKYTLTSLLRCYCNAGRPDDANDVFQRMSELGWVDEHV-LTTLMVAFSKWGKV 261

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L +M+  G          ++  F K GR+ +A D   +MV+ G  +D+  Y+ L
Sbjct: 262 DGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVL 321

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN--IKGARLHLEYMNKI 351
           I   C++  +  A  L  EM+  G   D      +I+  C+ G+  + G  ++ E    +
Sbjct: 322 IEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFIN-ENAEYL 380

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              S +  YN +++ L   G+++ A  +  SM
Sbjct: 381 KSGSVVPLYNVVLEELVHCGEVEAAYQLLRSM 412


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 171/319 (53%), Gaps = 2/319 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G++PD V Y M+I  +C+         + + M   G  PDVVTYN+L+ G  +   L  
Sbjct: 10  FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 69

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  LL+EM E G+PPD+ ++ +L+H     GK D+A ++F  M+   L P   T+N +++
Sbjct: 70  AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 129

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G+C+    D A  ++  +      P  VTY+ILI   C+ G++  A   L E+ + G  P
Sbjct: 130 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 189

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY +I+K   R+     G + L  M     + D   Y T+I  ++K  ++ +A   +
Sbjct: 190 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 249

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M  + VQ D+V+YN LIN +   G ++ A  + ++M  +G E D+YT+  +I+G   A
Sbjct: 250 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 309

Query: 336 GNIKGA-RLHLEYMNKIGF 353
           GN K A +LH E + + GF
Sbjct: 310 GNSKEAFQLHDEMLQR-GF 327



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 163/305 (53%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+A  +  A  +  + +  G LPDVVTYN L++  C+         +LN MRE G+ PD
Sbjct: 26  FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 85

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + T+ +LI G      L  +L L D ML   + PD+ +YN+L+  + + G  D+AN ++ 
Sbjct: 86  LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 145

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM   ++ P   T++I+++  C+    ++A      +   G +P ++TYN +IKG C++G
Sbjct: 146 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 205

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +   +  L+++  +  +P+ ITY T++    +  K     ++L+ M+++    D   Y 
Sbjct: 206 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 265

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F   G ++EA    E+M   G++ D  +Y ++IN +   G  + A+ L DEM ++
Sbjct: 266 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325

Query: 317 GFECD 321
           GF  D
Sbjct: 326 GFAPD 330



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 161/319 (50%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  MR  G+ PD V Y  +I G  R  L+S +L + DEM+  G  PDV +YN+L++ L +
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +  +A  +  +M    + P   TF  +++G C     D AL++F  +      P++VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI G+C+ G L  A  +  ++      PN +TY+ ++       + +     L  M 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   +   Y ++I  + + G + +   ++++M+ + V  D+++YNTLI+ Y KE K+ 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LL+ MEK+  + D  T+ +LI+G    GN++ A    E M   G + +   Y  ++
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 365 DRLGKDGKIDHAINVFESM 383
           +     G    A  + + M
Sbjct: 304 NGHVTAGNSKEAFQLHDEM 322



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 154/319 (48%), Gaps = 4/319 (1%)

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            ++M C  L P    + +++ G C+     +ALR+   +   G +P++VTYN L+ GLCK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
             RL  A  +L E+ + G  P+  T+TT++       K    L++   M  +    D   
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I    + G L +A D  + M +  +  + V+Y+ LI+ +C++G++E A+  LDEM 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            +G   +  T+  +I G C++GN+   +  L+ M       +L  YN ++    K+ K+ 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A  +   ME +    D  TY+ +++       +  A  +       G+   +    +++
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 431 DGLRHSGCRREAKKIQSKI 449
           +G   +G  +EA ++  ++
Sbjct: 304 NGHVTAGNSKEAFQLHDEM 322



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C+   L+KA  +  D     + P+ VTY++LID++C+    +  +  L+ M  
Sbjct: 125 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 184

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P+++TYNS+I G  R+  +S     L +M+   + PD+ +YN+L+H   +  K  +
Sbjct: 185 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 244

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M    + P   T+N+++NG   +     A  +F  +   G  P+  TY  +I 
Sbjct: 245 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 304

Query: 191 GLCKAGRLRTARWILKELGDSGHAPN 216
           G   AG  + A  +  E+   G AP+
Sbjct: 305 GHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 4/220 (1%)

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           L  M+  G   DG  Y  VI  F + G + +A    ++MV  G   D+V+YNTL+N  CK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           E +L  A  LL+EM ++G   D  T T LI G C  G +  A    + M       ++  
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN ++D + + G +D A ++++ M  ++ F    TYS ++ + C+  ++  A   L   +
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             G+        +++ G   SG   + +K   K+ + K+S
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 223



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 4/141 (2%)

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           Y+ +M   G+  D V Y  +I  +C+ G +  A  + DEM   G   D  T+  L++GLC
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           K   +  A   L  M + G   +L  +  ++     +GK+D A+ +F++M  +    D  
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 390 TYSSMVHNLCKAKRLPSASKL 410
           TY++++  +C+   L  A+ L
Sbjct: 123 TYNTLIDGMCRQGDLDKANDL 143


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 192/392 (48%), Gaps = 6/392 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A R++    +  + +   V+ DV T   L+ A+C       G+ +L R+ E G+ P   
Sbjct: 239 RAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNA 298

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            +N LI+G  ++       DLL  M+     PD+++Y  +++ L + GK  E  RVF+D+
Sbjct: 299 AFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDL 358

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                 P    +  M++GLC+ ++  +A +++  + + GF+P   TYN +I G  K G L
Sbjct: 359 KDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNL 418

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  + +E+ D G+    ++Y  ++K    + K K   ++   M  KG   +   Y  +
Sbjct: 419 EEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNAL 478

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +  F K G++ E  + + +++  G+Q    SY  LI+  C+EG ++ A +L D+M+ +G 
Sbjct: 479 VRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGM 538

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E    TH  +I G CK G        L  M +       +++  ++  L +  ++D A+ 
Sbjct: 539 EPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALL 598

Query: 379 VFESMEVKDSFTYS-----SMVHNLCKAKRLP 405
           V +SM +K  F  S     S+V  LC+   LP
Sbjct: 599 VLDSM-LKIGFRLSISICNSLVTKLCEKNSLP 629



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 156/329 (47%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FCK     +   ++   I     PD+ TY  +++  C+      G+ +   ++
Sbjct: 300 FNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLK 359

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G +PD V Y ++I G  R   L  +  L  EM++ G  P+ ++YN+++H  F++G  +
Sbjct: 360 DRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLE 419

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA +++++M        T ++N+M+ GLC +     A  +F  +   G +   +TYN L+
Sbjct: 420 EAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALV 479

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G CK G++     +L EL D G  P+A +Y  ++    +    +    +   M+ +G  
Sbjct: 480 RGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGME 539

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                +  +I  F K G   E  +++  M+   ++    S+ +LI    +  +L+ A L+
Sbjct: 540 PAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLV 599

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           LD M K GF         L+  LC+  ++
Sbjct: 600 LDSMLKIGFRLSISICNSLVTKLCEKNSL 628



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 183/428 (42%), Gaps = 12/428 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD  + N+L DA  +  + +A  + L+       +P   +  + I    +  L+  +
Sbjct: 155 GFSPDSSSCNVLFDALVEAGACNAAKSFLD---STNFNPKPASLEAYIRCLCKGGLVEEA 211

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + +  ++  +G+   + ++NS++    + G+ D    ++ +M+   +     T   ++  
Sbjct: 212 ISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQA 271

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C      +   + R + + G VP    +N LI G CK         +L  +     AP+
Sbjct: 272 FCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPD 331

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++    +  K   G  +   +K +GY  D   Y T+I    ++  L +A     
Sbjct: 332 IFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWF 391

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+  G   +  +YN +I+ Y K G LE A+ +  EM  +G+     ++ ++I GLC  G
Sbjct: 392 EMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHG 451

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-VFESME---VKDSFTYS 392
            IK A    E M+  G   N   YN +V    K+GKI    N ++E ++      + +Y+
Sbjct: 452 KIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYA 511

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK-----IQS 447
            ++  LC+   + +A  L       G+         ++ G    GC  E  +     ++S
Sbjct: 512 PLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRS 571

Query: 448 KIRMAKIS 455
           K+R  K S
Sbjct: 572 KLRPQKKS 579


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 165/324 (50%), Gaps = 2/324 (0%)

Query: 16  TFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           + CKA ++ +A AI    +    V+PDVV+Y++LID +C+         +  +M +    
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+V TYN+ + G  R   ++ +  + +EM+  G  PDV +Y++L+H      K D+A+ +
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+ MI     P   T+N +L+GLCK    D A  +FR + + G  P+ VTY  L+ G C 
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G++  A  +  E+   GH P+ + Y  ++K  FR  K     ++   M  +    D   
Sbjct: 310 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS 369

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +  +I    K  RL +A +  E+M  D G   D+V+YN+LI   C E +L  A  +  E+
Sbjct: 370 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429

Query: 314 EKQGFECDKYTHTILIDGLCKAGN 337
           ++     D +   +L++ +  AG+
Sbjct: 430 DRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 39/401 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA R++ A +++   I+ G  PD+ T++MLI+  C+          L  M        
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-------- 110

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N  I+  TR S  SC                 +SYNSL++ L +  K  +A  +F 
Sbjct: 111 ----NRTIS--TRAS--SC-----------------FSYNSLLNSLCKAKKVHQAFAIFS 145

Query: 137 DMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M+    + P   +++I+++G CK      A ++++ +     VP + TYN  + GL + 
Sbjct: 146 TMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRK 205

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A+ + +E+  +G +P+ ITY+T++      RK+    E+  AM  +G   +   Y
Sbjct: 206 GRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTY 265

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++    K  +  EA +   +MV  G   D V+Y TL+  +C  GK+E A  + DEM  
Sbjct: 266 NCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVS 325

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G + D   +  L+ G  +AG    AR   + M       +  ++N ++D L K  ++D 
Sbjct: 326 KGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDD 385

Query: 376 AINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           A+ VFE ME       D  TY+S++  LC  +RL  A K+ 
Sbjct: 386 AVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 426



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 180/360 (50%), Gaps = 6/360 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGV---LPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAG 72
            CKA+++++A+  +  G+   +        +YN L+++ C+       + I + M  E  
Sbjct: 94  LCKADKIQEAQEFL-QGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERS 152

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + PDVV+Y+ LI G  +   L  +  L  +M+++   P+V +YN+ ++ L + G+  +A 
Sbjct: 153 VVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQ 212

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V+++MI    +P   T++ +++G    R  D A  +F  +   G  P  VTYN L+ GL
Sbjct: 213 GVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGL 272

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK  +   A  + +++ + G  P+ +TYTT++       K +  +E+   M  KG+  D 
Sbjct: 273 CKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDV 332

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  ++  F + G+  EA    + MV+   + D VS+N +I+   K  +L+ A  + + 
Sbjct: 333 VAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392

Query: 313 MEK-QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           ME+  G   D  T+  LI GLC    +  A    + ++++    +  A+N +++ +   G
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 10/280 (3%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV---TYNILIKGLCKAGRLRTARWIL 205
            +   L GLCK+   + A    R +Q+     +     T + +I+ LCKAGR+ +A  +L
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGYCTVIAAFV 263
           + +   G+ P+  T++ ++    +  K +   E L  M R   T     F Y +++ +  
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132

Query: 264 KIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
           K  ++ +A      MV++  V  D+VSY+ LI+ +CK  +L  A  L  +M       + 
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+   ++GL + G I  A+   E M   G   ++  Y+ ++       K D A  +FE+
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           M  +    ++ TY+ ++H LCK  +   A +L    ++ G
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 12/249 (4%)

Query: 183 VTYNILIKGLCKAGRLRTA----RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           V +   + GLCK+G++  A    R + + L  S    +   ++ I + C   R     L 
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGR-VDSALS 70

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--VTDGVQLDIVSYNTLINL 296
           +L  M ++GY  D   +  +I    K  +++EA ++++ M            SYN+L+N 
Sbjct: 71  LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNS 130

Query: 297 YCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            CK  K+  A+ +   M  ++    D  +++ILIDG CK   +  A    + M  +    
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           N+  YN  ++ L + G+I  A  V+E M       D  TYS+++H    A++   A +L 
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 412 LSCLKSGVR 420
            + +  G R
Sbjct: 251 EAMISRGCR 259



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 45/177 (25%)

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAY------------------------------- 307
           V     L+ V++   +   CK GK+E A+                               
Sbjct: 3   VESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKA 62

Query: 308 -------LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI--GFDSNLE 358
                   LL+ M K+G+  D  TH++LI+ LCKA  I+ A+  L+ MN+      S+  
Sbjct: 63  GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122

Query: 359 AYNCIVDRLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
           +YN +++ L K  K+  A  +F +M      V D  +YS ++   CK   L  A KL
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL 179


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 188/388 (48%), Gaps = 7/388 (1%)

Query: 30  IIDGI--RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           + DG+  R G+LPD  ++  LI   C+    +    +L  M+  G   D  T   ++   
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
            +        +L   MLEMG PP+V +Y + +  L +     +A  V ++M+   L P  
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILK 206
            T   ++NGLCK  +T+ A R+F  L K   + P + TY ++I G CK G+L  A  +L 
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            + + G APN  TYTT++    +   +    E+++ M+R+G+  + + Y  +I    K G
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +++EA   +      G+QLD V+Y  +I  +CK+G +  A  L + M + G   D +T+T
Sbjct: 411 KIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYT 470

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            LI   C+   ++ ++   +    I      + Y  ++    K GK   A+ VFE M   
Sbjct: 471 TLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQN 530

Query: 387 ----DSFTYSSMVHNLCKAKRLPSASKL 410
               DS TY +++  LCK  RL  A  L
Sbjct: 531 GCQADSITYGALISGLCKESRLEEARAL 558



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 171/367 (46%), Gaps = 1/367 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+  R+E+ +A++      G   D  T  +++  +CQ   F     +  RM E G  P+V
Sbjct: 196 CRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNV 255

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y + I G  + + +  +  +L+EM+  G+ P+V+++ SL++ L ++G  + A R+F  
Sbjct: 256 VNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLK 315

Query: 138 MI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +I      P   T+ +M+ G CK      A  +   + + G  P   TY  LI G CK G
Sbjct: 316 LIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEG 375

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  ++ ++   G  PN  TY  ++    +  K +   ++L     +G   D   Y 
Sbjct: 376 SFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYT 435

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G +  A D   +M  +G   DI +Y TLI  YC++ ++E +  L D+    
Sbjct: 436 VMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAI 495

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                K T+T +I G CK G    A    E M + G  ++   Y  ++  L K+ +++ A
Sbjct: 496 ELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEA 555

Query: 377 INVFESM 383
             ++E M
Sbjct: 556 RALYEGM 562



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 179/395 (45%), Gaps = 49/395 (12%)

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-G 141
           ++A       L  + D++ EM   G+P  V + N ++      G    A +VF  M+  G
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 142 DLTPCTATFNIMLNGLC------------------------------------KNRYTDN 165
            L P   +F  ++ G C                                    K R+ D 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM- 224
           +  +FR + + G  P +V Y   I GLCK   ++ A ++L+E+   G  PN  T+T+++ 
Sbjct: 240 S-ELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLIN 298

Query: 225 ---KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
              K  +  R ++L L+++   K   Y  +   Y  +I  + K G+L  A   + +MV  
Sbjct: 299 GLCKIGWTERAFRLFLKLI---KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 355

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  +  +Y TLI+ +CKEG    A+ L+++M ++GF+ + YT+  LIDGLCK G I+ A
Sbjct: 356 GLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEA 415

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 397
              L   N  G   +   Y  ++    K G I +A+++F  M       D  TY++++  
Sbjct: 416 YKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIAR 475

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            C+ +++  + KL   CL   +   K    +++ G
Sbjct: 476 YCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 1/339 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + V  FC+  R      +    + +G  P+VV Y   ID  C+       + +L  M  
Sbjct: 224 TVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVA 283

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPD 129
            G+ P+V T+ SLI G  +      +  L  ++++     P+V +Y  ++    + GK  
Sbjct: 284 KGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLA 343

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +   M+   L P T T+  +++G CK    + A  +   +++ GF P + TYN LI
Sbjct: 344 RAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALI 403

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK G+++ A  +L+   + G   + +TYT ++    +       L++ + M   G  
Sbjct: 404 DGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCH 463

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+IA + +  +++E+    ++ +   +     +Y ++I  YCK GK  +A  +
Sbjct: 464 PDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRV 523

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            + M + G + D  T+  LI GLCK   ++ AR   E M
Sbjct: 524 FERMVQNGCQADSITYGALISGLCKESRLEEARALYEGM 562



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 152/316 (48%), Gaps = 42/316 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  +L +AE ++   +  G+ P+  TY  LI  +C+  SF+  + ++N+MR  G  P+
Sbjct: 336 YCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPN 395

Query: 77  VVTYNSLIAG----------------ATRNSL-------------------LSCSLDLLD 101
           + TYN+LI G                A    L                   ++ +LDL +
Sbjct: 396 IYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFN 455

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M E G  PD+ +Y +L+    Q  + +E+ ++F   +  +L P   T+  M+ G CK  
Sbjct: 456 RMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVG 515

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            + +ALR+F  + ++G   + +TY  LI GLCK  RL  AR + + + D    P  +T  
Sbjct: 516 KSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPV 575

Query: 222 TIMKCCFRNRKYKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           T+     R  K  + + IL  +  +RK +T +      ++     IG +++A+ ++++ +
Sbjct: 576 TLAFEYCRREKAVVAVSILDRLDKRRKNHTVN-----VLVRKLSAIGHVEDASLFLKKAL 630

Query: 280 TDGVQLDIVSYNTLIN 295
              + +D ++Y + IN
Sbjct: 631 DVDLAVDRLAYTSFIN 646



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 170/368 (46%), Gaps = 4/368 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK    E+A  + +  I+     P+V TY ++I  YC+         +L RM E G++P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TY +LI+G  +    +C+ +L+++M   G  P++++YN+L+  L + GK  EA +V 
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           +      L     T+ +M+   CK  +   AL +F  + ++G  P++ TY  LI   C+ 
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            ++  ++ +  +       P   TYT+++    +  K    L +   M + G   D   Y
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITY 539

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I+   K  RL+EA    E M+   +    V+  TL   YC+  K   A  +LD ++K
Sbjct: 540 GALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDK 599

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +      +T  +L+  L   G+++ A L L+    +    +  AY   ++    + K   
Sbjct: 600 RR---KNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKYAL 656

Query: 376 AINVFESM 383
           A  + E +
Sbjct: 657 ATEISEKI 664



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 11/295 (3%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTI 223
            A  M   ++ HG    + T N +++     G    AR +   +    G  P+A ++  +
Sbjct: 132 EAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRAL 191

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA-AFVKIGRLKEATDYMEQMVTDG 282
           +  C R+ + +    +L+ M+ +G+  D    CTVI   F + GR ++ ++   +M+  G
Sbjct: 192 IVGCCRDGRMEEVDALLTVMQGQGFCLDN-ATCTVIVRVFCQKGRFRDVSELFRRMLEMG 250

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 341
              ++V+Y   I+  CK   ++ A+ +L+EM  +G + + YTHT LI+GLCK G  + A 
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHN 397
           RL L+ +    +  N+  Y  ++    K+GK+  A      + E     ++ TY++++  
Sbjct: 311 RLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISG 370

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            CK      A +L+    + G +       A++DGL   G  +EA K+   +RMA
Sbjct: 371 HCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKV---LRMA 422



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 32/261 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  ++++A  ++      G+  D VTY ++I  +C+         + NRM E
Sbjct: 400 NALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAE 459

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+ TY +LIA   +   +  S  L D+ L + + P   +Y S++    ++GK   
Sbjct: 460 NGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTS 519

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT------ 184
           A RVF+ M+       + T+  +++GLCK    + A  ++ G+     VP  VT      
Sbjct: 520 ALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAF 579

Query: 185 --------------------------YNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                                      N+L++ L   G +  A   LK+  D   A + +
Sbjct: 580 EYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRL 639

Query: 219 TYTTIMKCCFRNRKYKLGLEI 239
            YT+ +  C+ N+KY L  EI
Sbjct: 640 AYTSFINSCYANKKYALATEI 660


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 4/395 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++   N  +  FC+   L +A  ++ D    G+ P   +Y++LID  C+    +    +
Sbjct: 321 LNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDL 380

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M ++ + P +VTY+SL  G  ++ L   SL +   +   G   DV SYN+L++    
Sbjct: 381 IEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVL 440

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
                 A ++  +M      P + TFN +++G CK +  D AL +F  + K G    + T
Sbjct: 441 QRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFT 500

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
            NI+     + G    A  ++ E+ D G  PN+ TY  ++K   + +K +   E+L  M 
Sbjct: 501 CNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVML 560

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +         Y T+I  + K     +A     +M+  G+   IV+Y  LIN++    K++
Sbjct: 561 KNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQ 620

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            AY L  EM K+G   D+   T +I G CK G++K A    E M++ G   N+  Y C++
Sbjct: 621 EAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLI 680

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
           D   K  ++D A  +F  M+      D  TY++++
Sbjct: 681 DGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 196/418 (46%), Gaps = 9/418 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  F + N L  A  + +   R G+  ++++ N L++ + +    +   ++   +++
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 71  AGISPDVVTYNSLIAGATRNSL-----LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +G SP+V TY  ++    + S      +  + ++L+EM   G  P V +Y + +H L + 
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  + A R+ +D+   +    +  +N +++  C+N     A  +   ++ HG  P   +Y
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           +ILI GLCK G++  A  +++E+  S   P+ +TY+++     ++   ++ L +   +  
Sbjct: 362 SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +GY  D   Y T+I  FV    +  A   + +M  +G   +  ++N LI+ +CK  +L+ 
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +   M K G + + +T  I+ D   + G+   A   +  +  +G   N   YN ++ 
Sbjct: 482 ALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIK 541

Query: 366 RLGKDGKIDHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            L K+ K + A  V   M   + F     Y++++    K      A  L    LK G+
Sbjct: 542 WLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGI 599



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 184/414 (44%), Gaps = 44/414 (10%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           T+L+  ++A +   ++  N LI     N++L  + D+  +    G+  ++ S N L++C 
Sbjct: 164 TLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCF 223

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN-----ALRMFRGLQKHG 177
            +  + +    +F+++     +P   T+ IM+N  CK  +  N     A  +   ++ +G
Sbjct: 224 AEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNG 283

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P +VTY   I GLC+AG +  A  ++++L       N+  Y  ++    RN +     
Sbjct: 284 ESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAF 343

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------------------ 279
           E+L  M+  G +   + Y  +I    K G++++A D +E+MV                  
Sbjct: 344 ELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGL 403

Query: 280 -----------------TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
                             +G + D++SYNTLIN +  +  + +A  L+ EM   G   + 
Sbjct: 404 CKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNS 463

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +T   LI G CK   +  A      M K+G   N+   N + D   ++G    A+ +   
Sbjct: 464 FTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINE 523

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           ++    V +S+TY+ ++  LCK ++   A ++L   LK+ V         ++DG
Sbjct: 524 VQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDG 577



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 170/393 (43%), Gaps = 35/393 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  ++EKA  +I + ++  V P +VTY+ L D  C+    +   ++ + +  
Sbjct: 362 SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   DV++YN+LI G      +  +  L+ EM   G  P+ +++N L+H   +  + D+
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481

Query: 131 ANRVFQDM-------------ICGD----------------------LTPCTATFNIMLN 155
           A  VF  M             I  D                      + P + T+NI++ 
Sbjct: 482 ALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIK 541

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK + T+ A  +   + K+   P  + YN LI G  K      A  +  ++   G  P
Sbjct: 542 WLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPP 601

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TYT ++       K +    +   M +KG   D   +  +IA F K+G +K A    
Sbjct: 602 SIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALY 661

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E+M   G   ++V+Y  LI+ Y K  +++ A  L ++M++     D  T+T LI G    
Sbjct: 662 EEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSL 721

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           G     R     M + G   N  AY  +   LG
Sbjct: 722 GYSDRVREMFNEMKENGVFPNYTAYATLGLHLG 754


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 203/430 (47%), Gaps = 44/430 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  F K+ ++E+A     D  R G      ++N LI+ YC+   FD  + + + M  
Sbjct: 313 NILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLN 372

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AGI P   TYN  I        +  + +LL  M      PDV SYN+LMH   ++ K  E
Sbjct: 373 AGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVE 428

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F D+  G++ P   T+N +++GLC++   + A R+   +      P+++TY  L+K
Sbjct: 429 ASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLK 488

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----NRKYKLGLEILSA---- 242
           G  K G L  A  I  E+   G  P+   YTT      R     + ++L  E+++     
Sbjct: 489 GFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHA 548

Query: 243 ------------------------MKRK----GYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                                    +RK    G   D   Y TVI  +++ GR K A D 
Sbjct: 549 PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDL 608

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M++  +   +++Y  LI+ + K G+LE A+    EM+K+G   +  TH  L+ G+CK
Sbjct: 609 YDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCK 668

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFT 390
           AGNI  A  +L  M + G   N  +Y  ++ +     K +  + +++ M   E++ D +T
Sbjct: 669 AGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYT 728

Query: 391 YSSMVHNLCK 400
           + ++  +L K
Sbjct: 729 HRALFKHLEK 738



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 199/425 (46%), Gaps = 10/425 (2%)

Query: 1   MFGKLSTRL-LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           M G + T +  N  + +  KA  LE+ + I ++  R  +    VTYN+LI+ + +    +
Sbjct: 267 MHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKME 326

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
                   M+ +G      ++N LI G  +  L   +  + DEML  GI P   +YN  +
Sbjct: 327 EARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYI 386

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
             L + G+ D+A  +   M      P   ++N +++G  K R    A  +F  L+     
Sbjct: 387 RALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNIN 442

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P +VTYN LI GLC++G L  A+ + +E+      P+ ITYTT++K   +N    +  EI
Sbjct: 443 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEI 502

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYC 298
              M RKG   DG+ Y T     +++G  ++A    E+MV  D    D+  YN  I+  C
Sbjct: 503 YDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLC 562

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K G LE A     ++ + G   D  T+T +I G  + G  K AR   + M       ++ 
Sbjct: 563 KVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVI 622

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++    K G+++ A      M+ +    +  T+++++H +CKA  +  A + L   
Sbjct: 623 TYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM 682

Query: 415 LKSGV 419
            + G+
Sbjct: 683 EEEGI 687



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 163/329 (49%), Gaps = 5/329 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +   C+  R++ A  ++         PDVV+YN L+  Y +   F     + 
Sbjct: 378 TTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLF 433

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + ++   I+P +VTYN+LI G   +  L  +  L +EM    I PDV +Y +L+    + 
Sbjct: 434 DDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKN 493

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G    A  ++ +M+   + P    +     G  +   ++ A R+   +  +    P+L  
Sbjct: 494 GNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTI 553

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN+ I GLCK G L  A    +++   G  P+ +TYTT+++      ++K+  ++   M 
Sbjct: 554 YNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEML 613

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K  +     Y  +I    K GRL++A  Y  +M   GV+ +++++N L++  CK G ++
Sbjct: 614 SKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNID 673

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            AY  L +ME++G   +KY++TILI   C
Sbjct: 674 EAYRYLCKMEEEGISPNKYSYTILISKHC 702



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 9/396 (2%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             +M   G  P V   N ++     + +++ + ++ + M+  GI P V ++N+++   F+
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  +  ++++ +M   ++     T+NI++NG  K+   + A R    +Q+ GF     +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N LI+G CK G    A  +  E+ ++G  P   TY   ++      +     E+LS+M 
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA 406

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                 D   Y T++  ++K+ +  EA+   + +    +   IV+YNTLI+  C+ G LE
Sbjct: 407 AP----DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLE 462

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L +EM  Q    D  T+T L+ G  K GN+  A    + M + G   +  AY    
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               + G  + A  + E M  +D        Y+  +  LCK   L  A +      + G+
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGL 582

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                    V+ G    G  + A+ +  ++   ++S
Sbjct: 583 VPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLS 618



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + +  R + A  +  + +   + P V+TY +LI  + +    +  +     M++ G+ P+
Sbjct: 596 YLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPN 655

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           V+T+N+L+ G  +   +  +   L +M E GI P+ +SY  L+  HC   L K +E  ++
Sbjct: 656 VMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHC--DLDKWEEVVKL 713

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKN 160
           +++M+  ++ P   T   +   L K+
Sbjct: 714 YKEMLDKEIEPDGYTHRALFKHLEKD 739


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 202/423 (47%), Gaps = 36/423 (8%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ G  P VVTY +L++A C+   F     +L+ MR  G +P++VTYN +I G  R   +
Sbjct: 179 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 238

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             + ++L+ +   G  PD+ SY +++  L    + D+   +F +M+     P   TF+++
Sbjct: 239 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 298

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +   C+    + A+++ + + +HG  P     NI+I  +CK GR+  A   L  +G  G 
Sbjct: 299 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ I+YTT+++   R  +++   E+L  M RK    +   + T I    + G +++A  
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEG-------------------------------- 301
            +E M   G  + IV+YN L++ +C +G                                
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAE 478

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +L+AA  LL EM ++    +  T  +L+   C+ G ++ A   +  M + G   NL  +N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D + KD   + A+ +   +  K    D+ TYSS+V  L +  R   A ++L +    
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598

Query: 418 GVR 420
           G+R
Sbjct: 599 GMR 601



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 5/358 (1%)

Query: 59  DAGYTILNRMREAGISP----DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           D   T  +  R A   P       T     +GA+  +  S +      ML+ G  P V +
Sbjct: 130 DTAATAASTPRAASSPPCPSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVT 189

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y  L+  + +     EA  V  +M     TP   T+N+++NG+C+    D+A  +   L 
Sbjct: 190 YTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLS 249

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
            +GF P++V+Y  ++KGLC A R    + +  E+ D    PN +T+  +++   R    +
Sbjct: 250 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             +++L  M + G T +      VI A  K GR+ +A D++  M   G   D +SY T++
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
              C+ G+ E A  LL EM ++    ++ T    I  LC+ G I+ A   +E M + G  
Sbjct: 370 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS 429

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLL 411
             +  YN +V      G++D A+ +F ++  + ++ TY++++  LC A+RL +A++LL
Sbjct: 430 VGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELL 487



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 201/433 (46%), Gaps = 34/433 (7%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R +  + +  + +    +P+ VT++ML+  +C+    +    +L +M + G +P+
Sbjct: 267 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPN 326

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
               N +I    +   +  + D L+ M   G  PD  SY +++  L + G+ + A  +  
Sbjct: 327 TTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLP 386

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  +  P   TFN  +  LC+    + A+++   + ++G    +VTYN L+ G C  G
Sbjct: 387 EMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG 446

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+ +A  +   L      PN ITYTT++       +     E+L+ M +K    +   + 
Sbjct: 447 RVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFN 503

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +++ F + G ++EA + + QM+  G   +++++NTL++   K+   E A  LL  +  +
Sbjct: 504 VLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSK 563

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T++ ++D L +    + A   L  +  +G    +  YN I+  L K  + D A
Sbjct: 564 GVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQA 623

Query: 377 INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           I         D F Y  MV N C    +P+ S  ++                +++GL H 
Sbjct: 624 I---------DFFAY--MVSNGC----MPNESTYII----------------LIEGLAHE 652

Query: 437 GCRREAKKIQSKI 449
           G  +EA+ + S++
Sbjct: 653 GLLKEARYVLSEL 665



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 3/347 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T L NI +   CK  R++ A   + +    G  PD ++Y  ++   C+   ++    +L
Sbjct: 326 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 385

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M      P+ VT+N+ I    +  L+  ++ L++ M E G    + +YN+L+H     
Sbjct: 386 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 445

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ D A  +F ++ C    P T T+  +L GLC     D A  +   + +       VT+
Sbjct: 446 GRVDSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTF 502

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+L+   C+ G +  A  ++ ++ + G  PN IT+ T++    ++   +  LE+L  +  
Sbjct: 503 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 562

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG + D   Y +V+    +  R +EA   +  +   G++  +  YN ++   CK  + + 
Sbjct: 563 KGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ 622

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           A      M   G   ++ T+ ILI+GL   G +K AR  L  +   G
Sbjct: 623 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 669



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 35/209 (16%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
            L+    N+ V  FC+   +E+A  ++   +  G  P+++T+N L+D   +  + +    
Sbjct: 496 PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 555

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ +   G+S D +TY+S++   +R      ++ +L  + +MG+ P V  YN ++  L 
Sbjct: 556 LLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 615

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+A   F  M+               NG   N  T                    
Sbjct: 616 KRCETDQAIDFFAYMVS--------------NGCMPNEST-------------------- 641

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSG 212
            Y ILI+GL   G L+ AR++L EL   G
Sbjct: 642 -YIILIEGLAHEGLLKEARYVLSELYAKG 669


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 200/407 (49%), Gaps = 8/407 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +C+A  +++AEA++ +    G+   +  Y+ ++D Y    + +    +  R++E G 
Sbjct: 406 IYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGF 465

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P V+TY  LI   T+   +S +L++   M  +GI  ++ +Y+ L++   +L     A  
Sbjct: 466 APSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFA 525

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           VF+D+I   L P    +N ++   C     D A+ M + +QK    P   T+  +I G  
Sbjct: 526 VFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFA 585

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +AG +R A  I   +  SG  P   T+  ++      RK +  +EIL  M   G + D  
Sbjct: 586 RAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEH 645

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y T++  +  +G   +A +Y  +M  +G+QLD+ +Y  L+   CK G++++A  +  EM
Sbjct: 646 TYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM 705

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             Q    + + + ILIDG  + G+I  A   ++ MN+ G   ++  Y   ++   K G +
Sbjct: 706 NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDM 765

Query: 374 DHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLK 416
             A    E ME   VK +  TY++++H    A  LP  +   LSC +
Sbjct: 766 LRATKTMEEMEAAGVKPNVKTYTTLIHGWANAS-LPEKA---LSCFE 808



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 190/421 (45%), Gaps = 4/421 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           ++S    +I V  F K    E A+             +   Y  +I AYCQ  + D    
Sbjct: 361 EMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEA 420

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++  M E GI   +  Y++++ G T        L +   + E G  P V +Y  L++   
Sbjct: 421 LVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYT 480

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++GK  +A  V + M    +     T+++++NG  K +   NA  +F  + K G  P++V
Sbjct: 481 KIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVV 540

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN +IK  C  G +  A  ++KE+      P + T+  I+    R  + +  LEI   M
Sbjct: 541 LYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMM 600

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +R G       +  ++   V+  ++++A + +++M   GV  D  +Y T+++ Y   G  
Sbjct: 601 RRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDT 660

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A+    +M  +G + D +T+  L+   CK+G ++ A      MN      N   YN +
Sbjct: 661 GKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNIL 720

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   + G I  A ++ + M  +    D  TY+S ++  CKA  +  A+K +     +GV
Sbjct: 721 IDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGV 780

Query: 420 R 420
           +
Sbjct: 781 K 781



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 35/364 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + +  ++ +  F K      A A+  D I+ G+ PDVV YN +I A+C   + D    
Sbjct: 501 KHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 560

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++  M++    P   T+  +I G  R   +  +L++ D M   G  P V ++N+L+  L 
Sbjct: 561 MVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLV 620

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  K ++A  +  +M    ++P   T+  +++G      T  A   F  ++  G   ++ 
Sbjct: 621 EKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVF 680

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+K  CK+GR+++A                                   L +   M
Sbjct: 681 TYEALLKACCKSGRMQSA-----------------------------------LAVTREM 705

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +    + F Y  +I  + + G + EA D M+QM  +GVQ DI +Y + IN  CK G +
Sbjct: 706 NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDM 765

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A   ++EME  G + +  T+T LI G   A   + A    E +   G   +   Y+C+
Sbjct: 766 LRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCL 825

Query: 364 VDRL 367
           +  L
Sbjct: 826 MTSL 829



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 145/338 (42%), Gaps = 12/338 (3%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G    A + F+ M    + P +  +  +++     R  + AL   R + + G    LVTY
Sbjct: 308 GDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTY 367

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILS 241
           +I++ G  K G    A    K+  +     NA  Y  I+    + C  +R   L  E   
Sbjct: 368 SIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVRE--- 424

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M+ +G       Y T++  +  I   ++     +++   G    +++Y  LIN+Y K G
Sbjct: 425 -MEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIG 483

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           K+  A  +   M+  G + +  T+++LI+G  K  +   A    E + K G   ++  YN
Sbjct: 484 KVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYN 543

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            I+      G +D AI++ + M+ +     S T+  ++H   +A  +  A ++     +S
Sbjct: 544 NIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 603

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           G         A+V GL       +A +I  ++ +A +S
Sbjct: 604 GCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVS 641



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/382 (20%), Positives = 165/382 (43%), Gaps = 8/382 (2%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP-DEANR 133
           P    +  ++    R   +  +    + M   GI P    Y SL+H  + +G+  +EA  
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHA-YAVGRDMEEALS 350

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             + M    +     T++I++ G  K    + A   F+  ++         Y  +I   C
Sbjct: 351 CVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYC 410

Query: 194 KAGRLRTARWILKELGDSG-HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           +A  +  A  +++E+ + G  AP  I Y T+M      R  +  L +   +K  G+    
Sbjct: 411 QACNMDRAEALVREMEEEGIDAPLDI-YHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSV 469

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I  + KIG++ +A +  + M + G++ ++ +Y+ LIN + K      A+ + ++
Sbjct: 470 ITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFED 529

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           + K G + D   +  +I   C  GN+  A   ++ M K         +  I+    + G+
Sbjct: 530 VIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGE 589

Query: 373 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +  A+ +F+ M     +    T++++V  L + +++  A ++L     +GV   +     
Sbjct: 590 MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTT 649

Query: 429 VVDGLRHSGCRREAKKIQSKIR 450
           ++ G    G   +A +  +K+R
Sbjct: 650 IMHGYAALGDTGKAFEYFTKMR 671


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 187/371 (50%), Gaps = 10/371 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI----------DAYCQFVSFDA 60
           NI + +FC+   +  A +++   +++G  P+ +T N LI          D +C       
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              + N+M    I+PDV T+  L+ G  +   +  + ++L  M+  GI P V +YNSLM 
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
             F + + ++A  +F  M    ++P   +++I++NG CK +  D A+ + + +     +P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY+ LI GLCK+G++  A  ++ E+ D G  PN +TY++I+    +N +    + +L
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + MK +G   + + Y  +I    + G+L++A    E ++  G  L++ +Y  +I  +C +
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G  + A  LL +ME  G   +  T+ I+I  L K    + A   L  M +  FD  +   
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALT 460

Query: 361 NCIVDRLGKDG 371
           N ++  +   G
Sbjct: 461 NDLIASIWVTG 471



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 187/389 (48%), Gaps = 49/389 (12%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL---- 92
           G+ P++V  N+LI+++CQ     + +++L ++ + G  P+ +T N+LI G   N      
Sbjct: 92  GIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDK 151

Query: 93  ------LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
                 L  ++DL ++M+   I PDV+++  L+    + G+  EA  V   M+   + P 
Sbjct: 152 HCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPG 211

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
             T+N +++G    +  + A  +F  + + G  P++ +Y+ILI G CK   +  A  +LK
Sbjct: 212 VVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+      PN +TY+                                   ++I    K G
Sbjct: 272 EMHHKQIIPNVVTYS-----------------------------------SLIDGLCKSG 296

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           ++  A   +++M   G   +IV+Y+++++  CK  +++ A  LL +M+ QG + + YT+T
Sbjct: 297 KISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYT 356

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           ILI GLC++G ++ AR   E +   G + N+  Y  ++      G  D A+ +   ME  
Sbjct: 357 ILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDN 416

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLL 411
             + ++ TY  ++ +L K      A KLL
Sbjct: 417 GCIPNAKTYEIIILSLFKKDENEMAEKLL 445



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 147/285 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I V  FCK  R+++A+ ++   +  G+ P VVTYN L+D Y      +   +I N M 
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+SPD+ +Y+ LI G  +  ++  +++LL EM    I P+V +Y+SL+  L + GK  
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A ++  +M      P   T++ +L+ LCKN   DNA+ +   ++  G  P + TY ILI
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           KGLC++G+L  AR + ++L   GH  N  TYT +++       +   L +LS M+  G  
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
            +   Y  +I +  K    + A   + +M+       +   N LI
Sbjct: 420 PNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 196/447 (43%), Gaps = 65/447 (14%)

Query: 34  IRLGVLP---DVVTYNMLIDAYCQFVSF-------------DAGYTILNRMREAGISPDV 77
           +R G +P      ++  LI+ +  F+ +             D   ++ NR+ +   +P  
Sbjct: 3   LRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPN 62

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           + +N ++    ++      L L  +M   GI P++ + N L++   QLG    A  V   
Sbjct: 63  IEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTK 122

Query: 138 MICGDLTPCTATFNIMLNGLCKN-RYTD---------NALRMFRGLQKHGFVPELVTYNI 187
           ++     P T T N ++ GLC N +  D         +A+ +F  +      P++ T+ I
Sbjct: 123 ILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTI 182

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G CK GR++ A+ +L  +   G  P  +TY ++M                       
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM----------------------- 219

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              DG+           + ++ +A      M   GV  DI SY+ LIN +CK   ++ A 
Sbjct: 220 ---DGY---------FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAM 267

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL EM  +    +  T++ LIDGLCK+G I  A   ++ M+  G   N+  Y+ I+D L
Sbjct: 268 ELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 327

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+ ++D+AI +   M+ +    + +TY+ ++  LC++ +L  A K+    L  G  +  
Sbjct: 328 CKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNV 387

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIR 450
                ++ G    G   EA  + SK+ 
Sbjct: 388 YTYTVMIQGFCDKGLFDEALTLLSKME 414


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 191/374 (51%), Gaps = 1/374 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           ++  R+L   +   C   R+ +A +++ + +  G   D V Y  +I+  C+         
Sbjct: 137 QIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQ 196

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +M++  + P+++ YN++I G  +  L+  +  L  EM+E GI  DV+SYNS++H   
Sbjct: 197 MFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFC 256

Query: 124 QLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +G+   A ++  +M+  G + P   TFNI+++GLCK      A  +   + K G+ P++
Sbjct: 257 SVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDI 316

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V+YN L+ G C +G +  A+ +  ++ +    PN I+Y T++    + R     + +L+ 
Sbjct: 317 VSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTE 376

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  K    D   Y  ++    K GR     D +E M   G   D+++YN L++ Y K  K
Sbjct: 377 MHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            + A  L   + + G   +  T+ IL+DGLCK+G +K A+   + ++  G   N+  YN 
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNI 496

Query: 363 IVDRLGKDGKIDHA 376
           ++  L K+G +D A
Sbjct: 497 MIHGLCKEGFLDEA 510



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 156/311 (50%), Gaps = 1/311 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   CK   +++A  +  + +  G+  DV +YN +I  +C    F A   +L+ M
Sbjct: 212 MYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEM 271

Query: 69  REAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
              G + PDV T+N LI G  +   +S + +++  M++ G  PD+ SYN+LM+     G 
Sbjct: 272 VVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGS 331

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA +VF  M+     P   ++  ++NG CK R  D A+ +   +     VP+ VTYN 
Sbjct: 332 VGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNC 391

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ GL K+GR      +++ +  SG   + ITY  ++   F++ K+   L +   +   G
Sbjct: 392 LLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIG 451

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + +   Y  ++    K GRLK A +  + +   G Q +I +YN +I+  CKEG L+ A 
Sbjct: 452 ISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAE 511

Query: 308 LLLDEMEKQGF 318
            LL +M    +
Sbjct: 512 ALLYKMVNNNY 522



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 200/415 (48%), Gaps = 5/415 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P ++T+++LI+A+ Q       +++L  + + G   DV    +L+ G      +  ++ L
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L E ++ G   D   Y ++++ L ++GK  +A ++F  M    + P    +N +++GLCK
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA-PNAI 218
               D A  +   + ++G   ++ +YN +I G C  GR + A  +L E+   G   P+  
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+  ++    +  +      +++ M ++G+  D   Y  ++  +   G + EA    ++M
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V      +++SY TLIN YCK   ++ A +LL EM  +    D  T+  L+DGL K+G  
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES-MEVKDSF---TYSSM 394
                 +E M   G  ++L  YN ++D   K  K D A+ +F+  +E+  S    TY+ +
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +  LCK+ RL  A ++       G +        ++ GL   G   EA+ +  K+
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 169/349 (48%), Gaps = 1/349 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +   A  +     ++ V P+++ YN +ID  C+    D    +   M E GI  D
Sbjct: 185 LCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELD 244

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           V +YNS+I G         ++ LLDEM+  G + PDV+++N L+  L +LG+  EA  V 
Sbjct: 245 VYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVV 304

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             MI     P   ++N ++NG C +     A ++F  + +   +P +++Y  LI G CK 
Sbjct: 305 AVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKV 364

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             +  A  +L E+ +    P+ +TY  ++    ++ +     +++ AM+  G   D   Y
Sbjct: 365 RMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITY 424

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++  + K  +  +A    + ++  G+  +I +YN L++  CK G+L+ A  +   +  
Sbjct: 425 NVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSA 484

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +G + +  T+ I+I GLCK G +  A   L  M    +  N   ++ IV
Sbjct: 485 KGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 116/209 (55%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C +  + +A+ +    +    LP+V++Y  LI+ YC+    D    +L  M    + PD
Sbjct: 326 YCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPD 385

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN L+ G +++       DL++ M   G P D+ +YN L+   F+  K D+A  +FQ
Sbjct: 386 TVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQ 445

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +I   ++P   T+NI+L+GLCK+     A  +F+ L   G  P + TYNI+I GLCK G
Sbjct: 446 HIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEG 505

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK 225
            L  A  +L ++ ++ + PN IT+ TI++
Sbjct: 506 FLDEAEALLYKMVNNNYLPNYITFDTIVR 534



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 150/329 (45%), Gaps = 41/329 (12%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNILI------------------- 189
           FN +L+ L K +  +  + ++  LQ K    P L+T++ILI                   
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 190 ----------------KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
                           KGLC  GR+  A  +L E  D G   + + Y TI+    +  K 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +  +++   MK+     +   Y TVI    K G + EA     +MV +G++LD+ SYN++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 294 INLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           I+ +C  G+ +AA  LLDEM  +G    D YT  ILIDGLCK G +  A   +  M K G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 408
           +  ++ +YN +++     G +  A  VF+ M     + +  +Y ++++  CK + +  A 
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            LL       +         ++DGL  SG
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 4/185 (2%)

Query: 12  ICVCT----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I  CT    +CK   +++A  ++ +     ++PD VTYN L+D   +       + ++  
Sbjct: 352 ISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA 411

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MR +G   D++TYN L+    ++     +L L   ++E+GI P++ +YN L+  L + G+
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A  +FQ +      P   T+NIM++GLCK  + D A  +   +  + ++P  +T++ 
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531

Query: 188 LIKGL 192
           +++ +
Sbjct: 532 IVRAI 536



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 56/113 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  + K  + +KA A+    I +G+ P++ TYN+L+D  C+         I   +  
Sbjct: 425 NVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSA 484

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            G  P++ TYN +I G  +   L  +  LL +M+     P+  ++++++  + 
Sbjct: 485 KGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 212/422 (50%), Gaps = 12/422 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC----QFVSFDAG 61
           S    N  +C FC+ +R+   E+++    +    PDVVT+N+LI+A C     +V+ D  
Sbjct: 246 SNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDW- 304

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
              L+ M  +G+ P V T+ +++    R   +  +  L D + +MGI P+   YN+LM  
Sbjct: 305 ---LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG 361

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
            F+  +  +A+ ++++M    ++P   TFNI++ G  K    +++ R+ + L   G   +
Sbjct: 362 YFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLD 421

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              Y++++  LC AGRL  A  +L+EL + G   + + + +++    R        E   
Sbjct: 422 SSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYR 481

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M R G+T       +++    + G L+EA   + +M+  G  ++ V+Y  L++ Y K  
Sbjct: 482 IMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMN 541

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            LE A  L  EM+++G   D    T LIDGL KAGN++ A      M+ IGF  N  AYN
Sbjct: 542 NLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYN 601

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L   G++  A+ + + M  K    D+FT++ ++   C+  ++  A +  L   + 
Sbjct: 602 SLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRI 661

Query: 418 GV 419
           G+
Sbjct: 662 GL 663



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 211/429 (49%), Gaps = 10/429 (2%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I  G  P  +T+N +I  +C+      G ++L+ M +   SPDVVT+N LI       
Sbjct: 237 DMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGG 296

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
               ++D L  M+  G+ P V ++ +++H L + G   EA ++F  +    + P  A +N
Sbjct: 297 RTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYN 356

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++G  K R    A  ++  ++  G  P+ VT+NIL+ G  K GR+  +  +LK+L  S
Sbjct: 357 TLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVS 416

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G   ++  Y  ++       +    +++L  +  KG T     + ++I A+ + G   +A
Sbjct: 417 GLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKA 476

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            +    MV  G      + N+L+   C++G L+ A +LL  M ++GF  +K  +T+L+DG
Sbjct: 477 FEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDG 536

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
             K  N++GA+   + M + G   +  A+  ++D L K G ++ A  VF  M     V +
Sbjct: 537 YFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPN 596

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK--I 445
           +F Y+S++  LC   R+  A KL     + G+         ++DG     CRR   K  I
Sbjct: 597 NFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGF----CRRGQMKFAI 652

Query: 446 QSKIRMAKI 454
           ++ + M +I
Sbjct: 653 ETFLDMQRI 661



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 192/407 (47%), Gaps = 6/407 (1%)

Query: 18  CKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C+   + +A  +  DGI+ +G+ P+   YN L+D Y +         +   MR  G+SPD
Sbjct: 328 CREGNVVEARKLF-DGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPD 386

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VT+N L+ G  +   +  S  LL +++  G+  D   Y+ ++  L   G+ DEA ++ Q
Sbjct: 387 CVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQ 446

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +++   LT     FN ++    +    D A   +R + + GF P   T N L+ GLC+ G
Sbjct: 447 ELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKG 506

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L+ AR +L  + + G   N + YT ++   F+    +    +   MK +G   D   + 
Sbjct: 507 WLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFT 566

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G ++EA +   +M   G   +  +YN+LI   C  G++  A  L  EM ++
Sbjct: 567 ALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQK 626

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D +T  I+IDG C+ G +K A      M +IG   ++  +N ++    K   +  A
Sbjct: 627 GLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGA 686

Query: 377 INVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             +   M       D  TY++ +H  C+ +++  A  +L   + +G+
Sbjct: 687 GEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGI 733



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 196/388 (50%), Gaps = 6/388 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + KA  + +A  +  +    GV PD VT+N+L+  + ++   +    +L  +  +G+  D
Sbjct: 362 YFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLD 421

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y+ +++       L  ++ LL E+LE G+   V ++NSL+    + G  D+A   ++
Sbjct: 422 SSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYR 481

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNA-LRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M+    TP ++T N +L GLC+  +   A + ++R L+K GF    V Y +L+ G  K 
Sbjct: 482 IMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEK-GFPINKVAYTVLLDGYFKM 540

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             L  A+++ KE+ + G  P+A+ +T ++    +    +   E+   M   G+  + F Y
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I      GR+ EA    ++M   G+  D  ++N +I+ +C+ G+++ A     +M++
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   D +T  ILI G CKA ++ GA   +  M   G D ++  YN  +    +  K++ 
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 376 AINVFESM----EVKDSFTYSSMVHNLC 399
           A+ + + +     V D+ TY++M+  +C
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGIC 748



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 1/373 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L + L ++ V + C A RL++A  ++ + +  G+   VV +N LI AY +    D  +  
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M   G +P   T NSL+ G  R   L  +  LL  MLE G P +  +Y  L+   F+
Sbjct: 480 YRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFK 539

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +   + A  ++++M    + P    F  +++GL K    + A  +F  +   GFVP    
Sbjct: 540 MNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFA 599

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI+GLC  GR+  A  + KE+   G   +  T+  I+    R  + K  +E    M+
Sbjct: 600 YNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           R G   D F +  +I  + K   +  A + + +M + G+  DI +YNT ++ YC+  K+ 
Sbjct: 660 RIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMN 719

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A ++LD++   G   D  T+  ++ G+C +  +  A +    + K+GF  N+   N ++
Sbjct: 720 QAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLL 778

Query: 365 DRLGKDGKIDHAI 377
               K G  + A+
Sbjct: 779 SHFCKQGMPEKAL 791



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 6/362 (1%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D    N+L+ G     +   +L++L  M  +G+ P + S   L+  L ++G      ++F
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           +DMI     P   TFN M+ G C+         +   + K    P++VT+NILI   C  
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR   A   L  +  SG  P+  T+TTI+    R        ++   ++  G   +   Y
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T++  + K   + +A+   E+M T GV  D V++N L+  + K G++E +  LL ++  
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   D   + +++  LC AG +  A   L+ + + G   ++ A+N ++    + G  D 
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDK 475

Query: 376 AINVFESMEVKDSFTYS-----SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           A   +  M V+  FT S     S++  LC+   L  A  LL   L+ G  I K A   ++
Sbjct: 476 AFEAYRIM-VRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLL 534

Query: 431 DG 432
           DG
Sbjct: 535 DG 536



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 1/187 (0%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   NI +  FC+  +++ A    +D  R+G+LPD+ T+N+LI  YC+         I+N
Sbjct: 632 TFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN 691

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M   G+ PD+ TYN+ + G  R   ++ ++ +LD+++  GI PD  +YN+++  +    
Sbjct: 692 KMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-D 750

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             D A  +   ++     P   T N++L+  CK    + AL   + L++  F  + ++Y 
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYR 810

Query: 187 ILIKGLC 193
           IL +  C
Sbjct: 811 ILDQAYC 817



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 4/203 (1%)

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  F+ +G   EA + +  M   GV+  + S   L+ L  + G   + + L  +M  +
Sbjct: 182 TLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFK 241

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G      T   +I G C+   +      L  M K     ++  +N +++     G+   A
Sbjct: 242 GPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVA 301

Query: 377 INVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I+    M    V+ S  T+++++H LC+   +  A KL       G+    +    ++DG
Sbjct: 302 IDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG 361

Query: 433 LRHSGCRREAKKIQSKIRMAKIS 455
              +    +A  +  ++R   +S
Sbjct: 362 YFKAREVAQASLLYEEMRTTGVS 384


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 220/472 (46%), Gaps = 39/472 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R + A  ++ D  R  V  DV TYN++ID  C+       + +L RMR+  ++PD
Sbjct: 270 YVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPD 329

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G  R   ++ +  + + ML   + P V +Y +++    +  + D+A  +  
Sbjct: 330 ECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILS 389

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T++ +LNG CK      A+ +   L+  G         ILI G C+ G
Sbjct: 390 EMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVG 449

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A+ ILK + + G  P+ ITY+ ++    R  K     EILS M++ G   +   Y 
Sbjct: 450 EISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYT 509

Query: 257 TVIAAFVKIGRLKEATD------------------------YMEQMVTDG---------- 282
           T+I  + K G +KEA                          Y E M+T+           
Sbjct: 510 TLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRM 569

Query: 283 -VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            +  D VS+N +I+ YC  G +  A+ + D+M + G+  +  T+  L+ GLC+ G++  A
Sbjct: 570 NISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQA 629

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
           R  +  +  I F  + + +N ++  + + G +D A+++ E M     + D  TY+ ++  
Sbjct: 630 RQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSG 689

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            C+  ++  A  +L   L+ GV     A   +++GL + G  + A  +  +I
Sbjct: 690 FCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEI 741



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 195/411 (47%), Gaps = 5/411 (1%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            +  +  N  +   C+   L++A  +    I+   LPD+ TY +L+  +C+         I
Sbjct: 643  IDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVI 702

Query: 65   LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLF 123
            L  M E G+ PD V Y  L+ G      +  +  +  E++ + G+  D  +YNSLM+   
Sbjct: 703  LQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYL 762

Query: 124  QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            +    +   R+  DM   ++ P +A++NI+++G  K      +L +++ + + G  P+ V
Sbjct: 763  KSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 822

Query: 184  TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            TY +LI GL + G +  A   L+++   G  P+ + +  ++       K    L++ + M
Sbjct: 823  TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCM 882

Query: 244  KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            K    +     +  +I   ++ G L  +   + +M+  G+Q +   Y  L+N  C+ G++
Sbjct: 883  KWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 942

Query: 304  EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            + A+ L +EM+  G    +   + +I GLC+ G ++ A +    M + G    +  +  +
Sbjct: 943  DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTL 1002

Query: 364  VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 410
            +  L K+ KI  A+++   ME+     D  +Y+ ++  LCK K +  A  L
Sbjct: 1003 MHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDL 1053



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 193/408 (47%), Gaps = 5/408 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+   + KA+ I+      G+ PDV+TY+ LI+  C+         IL+RM+++GI P+
Sbjct: 445 FCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPN 504

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y +LI    +   +  +L    ++   G+  +   +N+L+H  ++ G   EA    Q
Sbjct: 505 DVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQ 564

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M   +++  + +FN +++  C       A  ++  + ++G+ P + TY  L++GLC+ G
Sbjct: 565 YMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGG 624

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  AR  +  L D   A +  T+  ++    R       L++   M +     D   Y 
Sbjct: 625 HLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYT 684

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-K 315
            +++ F + G++  A   ++ M+  GV  D V+Y  L+N    EG+++AA  +  E+  K
Sbjct: 685 ILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICK 744

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D   +  L++G  K+ N+   +  +  M +     N  +YN ++    K G+   
Sbjct: 745 EGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSK 804

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ +++ M  K    D+ TY  ++  L +   +  A K L   +  G+
Sbjct: 805 SLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGI 852



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 197/435 (45%), Gaps = 9/435 (2%)

Query: 10   LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             N  + ++C    +  A ++  D +R G  P+V TY  L+   CQ          ++ + 
Sbjct: 578  FNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLL 637

Query: 70   EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +   + D  T+N+L+ G  R   L  +LDL ++M++    PD+ +Y  L+    + GK  
Sbjct: 638  DIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKIL 697

Query: 130  EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNIL 188
             A  + Q M+   + P T  +  +LNGL        A  +F  +  K G   + + YN L
Sbjct: 698  PALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSL 757

Query: 189  IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            + G  K+  + T + ++ ++  +   PN+ +Y  +M    +  ++   L +   M RKG 
Sbjct: 758  MNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI 817

Query: 249  TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
              D   Y  +I    + G +  A  ++E+MV +G+  D + ++ LI  + ++ K+  A  
Sbjct: 818  RPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQ 877

Query: 309  LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            + + M+         T + +I+GL + G +  +   L  M ++G   N   Y  +V+   
Sbjct: 878  VFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKC 937

Query: 369  KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
            + G+ID A  + E M+    V      SS++  LC+  +L  A  +  S ++SG+     
Sbjct: 938  RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGM----V 993

Query: 425  AQKAVVDGLRHSGCR 439
               A    L HS C+
Sbjct: 994  PTVATFTTLMHSLCK 1008



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 179/410 (43%), Gaps = 40/410 (9%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T N L+     N     + D+L +M    I   V +YN+++H   + G+   A  V +
Sbjct: 226 VTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVLE 284

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM    +     T+NIM++ LC+ + +  A  + + ++K    P+  TYN LI G  + G
Sbjct: 285 DMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREG 344

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-----TFD 251
           ++  AR++   +      P+  TYTT++    RNR+    L ILS M+  G      T+ 
Sbjct: 345 KINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYS 404

Query: 252 GF--GYCTV----------------------------IAAFVKIGRLKEATDYMEQMVTD 281
               GYC V                            I  F ++G + +A   ++ M  D
Sbjct: 405 ALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFED 464

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  D+++Y+ LIN  C+  K+     +L  M+K G   +   +T LI   CKAG +K A
Sbjct: 465 GIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEA 524

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI---DHAINVFESMEVK-DSFTYSSMVHN 397
             H   + + G  +N   +N ++    ++G I   +H       M +  DS +++ ++ +
Sbjct: 525 LKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDS 584

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
            C    +  A  +    ++ G        + ++ GL   G   +A++  S
Sbjct: 585 YCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMS 634



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 157/337 (46%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            + K+  +   + ++ D  +  V P+  +YN+L+  Y +   F     +   M   GI PD
Sbjct: 761  YLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPD 820

Query: 77   VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             VTY  LI G +   L+  ++  L++M+  GI PD   ++ L+    +  K   A +VF 
Sbjct: 821  NVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFN 880

Query: 137  DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
             M    ++P + TF+ M+NGL +  Y D++ ++   + + G  P    Y  L+   C+ G
Sbjct: 881  CMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVG 940

Query: 197  RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             +  A  + +E+   G  P  +  ++I++   R  K +  + + S+M R G       + 
Sbjct: 941  EIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFT 1000

Query: 257  TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            T++ +  K  ++ +A      M    +++D+VSYN LI   CK+  +  A  L  EM+ +
Sbjct: 1001 TLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSK 1060

Query: 317  GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
            G   +  T+  L   +   G ++     LE + + G 
Sbjct: 1061 GLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGL 1097



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 153/348 (43%)

Query: 37   GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            G+  D + YN L++ Y +  + +    +++ M +  + P+  +YN L+ G  +    S S
Sbjct: 746  GLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 805

Query: 97   LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            L L   M+  GI PD  +Y  L+  L + G  D A +  + M+   + P    F+I++  
Sbjct: 806  LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 865

Query: 157  LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
              +     NAL++F  ++     P   T++ +I GL + G L  +  +L E+   G  PN
Sbjct: 866  FSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPN 925

Query: 217  AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
               Y  ++    R  +      +   MK  G         ++I    + G+L+EA     
Sbjct: 926  HTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFS 985

Query: 277  QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
             M+  G+   + ++ TL++  CKE K+  A  L   ME      D  ++ +LI GLCK  
Sbjct: 986  SMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDK 1045

Query: 337  NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            +I  A      M   G   N+  Y  +   +   G++ +   + E +E
Sbjct: 1046 HISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIE 1093



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 144/308 (46%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +  + K  +  K+  +    +R G+ PD VTY +LI    +    D     L +M  
Sbjct: 790  NILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVL 849

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             GI PD + ++ LI   +  S +  +L + + M  + + P   +++++++ L + G  D 
Sbjct: 850  EGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDH 909

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            +++V  +M+   L P    +  ++N  C+    D A R+   ++  G VP  V  + +I+
Sbjct: 910  SHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIR 969

Query: 191  GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            GLC+ G+L  A  +   +  SG  P   T+TT+M    +  K    L +   M+      
Sbjct: 970  GLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRV 1029

Query: 251  DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
            D   Y  +I    K   + +A D   +M + G+  +I +Y TL       G+++    LL
Sbjct: 1030 DVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELL 1089

Query: 311  DEMEKQGF 318
            +++E++G 
Sbjct: 1090 EDIEERGL 1097



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 5/308 (1%)

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N +LN L +   + +     R      F   + T NIL+  LC  G  R A  +L+++  
Sbjct: 195 NTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM-K 253

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           S H  N++TY TI+    +  ++K  L +L  M+R     D + Y  +I    +I R   
Sbjct: 254 SCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTR 313

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +++M  D +  D  +YNTLIN + +EGK+  A  + + M +Q       T+T +ID
Sbjct: 314 AFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMID 373

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           G C+   I  A   L  M   G   +   Y+ +++   K   +  AI + E ++ +    
Sbjct: 374 GYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITI 433

Query: 391 YSSM----VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
             +M    +   C+   +  A ++L S  + G+        A+++G+       E K+I 
Sbjct: 434 NKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEIL 493

Query: 447 SKIRMAKI 454
           S+++ + I
Sbjct: 494 SRMQKSGI 501



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 134/275 (48%), Gaps = 6/275 (2%)

Query: 37   GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            G+ PD + +++LI A+ +         + N M+   +SP   T++++I G  R   L  S
Sbjct: 851  GIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHS 910

Query: 97   LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              +L EML++G+ P+   Y +L++   ++G+ D A R+ ++M    + P     + ++ G
Sbjct: 911  HKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRG 970

Query: 157  LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            LC+    + A+ +F  + + G VP + T+  L+  LCK  ++  A  + + +       +
Sbjct: 971  LCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVD 1030

Query: 217  AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             ++Y  ++    +++     L++   MK KG   +   Y T+  A    GR++   + +E
Sbjct: 1031 VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLE 1090

Query: 277  QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
             +   G+   I +Y    NL   E ++E A + L+
Sbjct: 1091 DIEERGL---IPAYKQPENL---ERRMEDAIIRLN 1119



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 105/210 (50%)

Query: 6    STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
            S++  +  +    +   L+ +  ++ + +++G+ P+   Y  L++A C+    D  + + 
Sbjct: 890  SSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 949

Query: 66   NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
              M+  GI P  V  +S+I G  R   L  ++ +   M+  G+ P V ++ +LMH L + 
Sbjct: 950  EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKE 1009

Query: 126  GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
             K  +A  + + M    L     ++N+++ GLCK+++  +AL ++  ++  G  P + TY
Sbjct: 1010 SKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTY 1069

Query: 186  NILIKGLCKAGRLRTARWILKELGDSGHAP 215
              L   +   GR++    +L+++ + G  P
Sbjct: 1070 ITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 8/214 (3%)

Query: 239 ILSAMKRKGYTFDGFGYCT---VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           I +++ R    FD   +     ++ A+VK  ++ +A   +  M   G +   VS NT++N
Sbjct: 140 IFTSLLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILN 199

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
              +EG+ +  +L L E   + F     T  IL++ LC  G  + A   L+ M      S
Sbjct: 200 ALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHI-S 258

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           N   YN I+    K G+   A+ V E ME      D +TY+ M+  LC+ KR   A  LL
Sbjct: 259 NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLL 318

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               K  +   +     +++G    G    A+ +
Sbjct: 319 KRMRKDDLTPDECTYNTLINGFFREGKINHARYV 352


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 200/432 (46%), Gaps = 29/432 (6%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           I  G  P  + +N L+ AYC+   +   Y +L +M   G  P  V YN LI G      L
Sbjct: 3   ITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDL 62

Query: 94  SCSLDLL-------DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
             S++++       +EMLEMG+  +  +  +   CL  +GK ++A  V ++M+     P 
Sbjct: 63  P-SMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           ++T++ ++  LC     + A ++F+ ++++G  P++ TY  L+   CK G +  AR    
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+   G APN +TYT ++    + RK     EI   M   G   +   Y  +I    K G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 267 RLKEATDYMEQMVTDGVQL-----------------DIVSYNTLINLYCKEGKLEAAYLL 309
             ++A     +M  D V +                 ++V+Y  L++  CK  K++ A  L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+ M  +G E ++  +  LIDG CK G +  A+     M   G   N+  Y+ ++D+L K
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           D ++D A+ V   M       +   Y+ MV  LCK  +   A +L+L   + G       
Sbjct: 362 DKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVT 421

Query: 426 QKAVVDGLRHSG 437
             A++DG   +G
Sbjct: 422 YTAMIDGFGKAG 433



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 201/450 (44%), Gaps = 58/450 (12%)

Query: 10  LNICVCT--FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           +N+C  T   C   + EKA  +I + +  G +PD  TY+ +I   C     +  + +   
Sbjct: 88  VNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQE 147

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  GI+PDV TY +L+    +  L+  + +  DEM + G  P+V +Y +L+H   +  K
Sbjct: 148 MKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRK 207

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM-----------------F 170
              AN +F+ M+     P   T+  +++G CK   T+ A ++                 F
Sbjct: 208 LSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYF 267

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           R +      P +VTY  L+ GLCKA +++ AR +L+ +   G  PN I Y  +       
Sbjct: 268 RIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDAL------- 320

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                                       I  F K+G+L EA +   +M+  G   ++ +Y
Sbjct: 321 ----------------------------IDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           ++LI+   K+ +L+ A  +L +M +     +   +T ++DGLCK G    A   +  M +
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            G   N+  Y  ++D  GK G++D  + + + M  K    +  TY  ++++ C A  L  
Sbjct: 413 KGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDD 472

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           A KLL    ++         + V++G  H 
Sbjct: 473 AHKLLEEMKQTYWPKHIGMYRKVIEGFSHE 502



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 3/344 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTY  L+D  C+         +L  M   G  P+ + Y++LI G  +   L  + ++
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +ML  G  P+V++Y+SL+  LF+  + D A +V   M+     P    +  M++GLCK
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              TD A R+   +++ G  P +VTY  +I G  KAGR+     +L+ +   G APN IT
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++  C          ++L  MK+  +      Y  VI  F        +   + ++ 
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELS 514

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            DG    +  Y  LI+ + K G+LE A  L +E+        + T+  LI+ L  A  + 
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNTYVSLIESLTLACKVD 573

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A      M + GF   L    C++  L + GK + A+ + +S+
Sbjct: 574 KAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 177/410 (43%), Gaps = 72/410 (17%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR- 161
           M+  G  P    +NSL+H   + G    A ++ + M+     P    +NI++ G+C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 162 -------------------------------YT---------DNALRMFRGLQKHGFVPE 181
                                          +T         + A  + R +   GF+P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL---- 237
             TY+ +I  LC A ++  A  + +E+  +G  P+  TYTT++     +R  K+GL    
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLL-----DRFCKVGLIEQA 176

Query: 238 -EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
                 M++ G   +   Y  +I A++K  +L  A +  E M+++G   +IV+Y  LI+ 
Sbjct: 177 RNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDG 236

Query: 297 YCKEGKLEAAYLLLDEMEKQGF-----------------ECDKYTHTILIDGLCKAGNIK 339
           +CK G+ E A  +   M+                     E +  T+  L+DGLCKA  +K
Sbjct: 237 HCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVK 296

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            AR  LE M+  G + N   Y+ ++D   K GK+D A  VF  M       + +TYSS++
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             L K KRL  A K+L   L++           +VDGL   G   EA ++
Sbjct: 357 DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRL 406



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 7/327 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA+++++A  ++      G  P+ + Y+ LID +C+    D    +  +M   G SP+
Sbjct: 289 LCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPN 348

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY+SLI    ++  L  +L +L +MLE    P+V  Y  ++  L ++GK DEA R+  
Sbjct: 349 VYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLML 408

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   T+  M++G  K    D  L + + +   G  P  +TY +LI   C AG
Sbjct: 409 MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAG 468

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  +L+E+  +    +   Y  +++         LGL  L+ +   G       Y 
Sbjct: 469 LLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGL--LAELSEDGSVPILPVYK 526

Query: 257 TVIAAFVKIGRLKEATDYMEQM--VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
            +I  F+K GRL+ A +  E++   +   Q   VS    + L C   K++ A+ L  +M 
Sbjct: 527 LLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLAC---KVDKAFKLYSDMT 583

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGA 341
           ++GF  +      LI GL + G  + A
Sbjct: 584 RRGFVPELSMLVCLIKGLLRVGKWEEA 610


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  + E A  ++ +   +G+ PDV+TY+ +IDA  +   ++  + +L  M   G+  +++
Sbjct: 268 KGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANII 327

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ +I    +      ++ LL EM E G+ PDV +Y+S +    + G+ +EA  + ++M
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               +TP   ++ I+++   K      A+ + + +Q HG  P+++ Y+  I    +A R 
Sbjct: 388 PMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRW 447

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A W+L+E+  +G  PN I+Y + +  C +  + K+ +E+L  M   G   D   Y  V
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           IA+     + +EA D   +M   G+  D+VS NT IN   + G  E A  +L EM   G 
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  ++   ID   K    K     L  M+ +G   +  +Y   +     DG    A+ 
Sbjct: 568 VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALV 627

Query: 379 VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           +   M       D  TY+S ++   K  R   A+ LL
Sbjct: 628 LLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLL 664



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 188/390 (48%), Gaps = 6/390 (1%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
           A + E+A  ++      G  PDV+TY+  I A  +   +     +L  M+  G+ P+V+ 
Sbjct: 199 ARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIV 258

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y++ I+   +      ++DLL EM  +G+ PDV +Y++++    + G+ + A R+  +M 
Sbjct: 259 YSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMP 318

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              +     T++I++    K    + A+ + R +Q++G  P+++TY+  I    K G+  
Sbjct: 319 TKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWE 378

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
            A  +L+E+   G  PNAI+Y  ++  C +  +++  +++L  M+  G   D   Y   I
Sbjct: 379 EAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAI 438

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
            A  +  R ++A   + +M   G+  +++SYN+ I+   K G+ + A  LL EM   G  
Sbjct: 439 DACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLA 498

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHL-EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
            D  T++ +I   C  G      L L   M + G   ++ + N  ++   + G  + A++
Sbjct: 499 PDVITYSAVI-ASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALD 557

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRL 404
           V   M     V D+ +Y + +    K  R 
Sbjct: 558 VLGEMPTMGLVPDAISYRTAIDACAKGDRW 587



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 175/373 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +    K  + E+A A++ +    GV PDV+TY+  I A  +   ++    +L  M  
Sbjct: 330 SIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPM 389

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P+ ++Y  +I+   +      ++DLL EM   G+PPDV +Y++ +    Q  + ++
Sbjct: 390 EGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQ 449

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    LTP   ++N  ++   K   +  A+ + R +  HG  P+++TY+ +I 
Sbjct: 450 ALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIA 509

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                 +   A  + +E+   G  P+ ++  T +  C +   ++  L++L  M   G   
Sbjct: 510 SCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVP 569

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T I A  K  R KE  D + +M T G+  D +SY   ++    +G  + A +LL
Sbjct: 570 DAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLL 629

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G   D  T+   I+   K G  K A + L  M   G   ++ ++N  +D  G  
Sbjct: 630 RDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNG 689

Query: 371 GKIDHAINVFESM 383
            +   A+ V   M
Sbjct: 690 DQWGTAVEVLFEM 702



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 177/365 (48%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  + E A  ++++    GV+ +++TY+++I A  ++  ++    +L  M+E G++PDV+
Sbjct: 303 KRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVI 362

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+S I+   +      ++ LL EM   G+ P+  SY  ++    + G+  EA  + Q+M
Sbjct: 363 TYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEM 422

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P    ++  ++   +    + AL + R +   G  P +++YN  I    K GR 
Sbjct: 423 QAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRS 482

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  +L+E+   G AP+ ITY+ ++  C   R+++  L++   M+R+G T D     T 
Sbjct: 483 KIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTA 542

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I A  + G  +EA D + +M T G+  D +SY T I+   K  + +    LL EM   G 
Sbjct: 543 INACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGL 602

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  ++   +      G  K A + L  M  +G   ++  YN  ++   K G+   A  
Sbjct: 603 TPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATV 662

Query: 379 VFESM 383
           +   M
Sbjct: 663 LLRQM 667



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 169/348 (48%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV PD   Y+  I A      ++    +L  M   G  PDV+TY+S IA   + S    +
Sbjct: 181 GVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEA 240

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LL  M   G+ P+V  Y++ +    + G+ + A  + ++M    L P   T++ +++ 
Sbjct: 241 VGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDA 300

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    + A R+   +   G V  ++TY+I+I    K G+   A  +L+E+ ++G AP+
Sbjct: 301 CAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPD 360

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY++ +  C +  +++  + +L  M  +G T +   Y  VI+A  K GR +EA D ++
Sbjct: 361 VITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQ 420

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   GV  D+++Y+  I+   +  + E A  LL EM   G   +  ++   ID   K G
Sbjct: 421 EMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTG 480

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
             K A   L  M   G   ++  Y+ ++       + + A+++F  M+
Sbjct: 481 RSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQ 528



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 169/370 (45%), Gaps = 4/370 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           Q+  +     +L+RM+E G+ PD   Y+S IA          +++LL  M   G PPDV 
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y+S +    ++ +  EA  + + M    + P    ++  ++   K    + A+ + + +
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P+++TY+ +I    K G+   A  +L E+   G   N ITY+ ++  C +  ++
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +  + +L  M+  G   D   Y + I+A  K G+ +EA   + +M  +GV  + +SY  +
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIV 402

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+   K G+   A  LL EM+  G   D   ++  ID   +A   + A   L  M   G 
Sbjct: 403 ISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGL 462

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
             N+ +YN  +D   K G+   A+ +   M       D  TYS+++ +    ++   A  
Sbjct: 463 TPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALD 522

Query: 410 LLLSCLKSGV 419
           L     + G+
Sbjct: 523 LFREMQRQGI 532



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 150/315 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +    K  R  +A  ++ +    GV PDV+ Y+  IDA  Q   ++    +L  M  
Sbjct: 400 GIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPA 459

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P+V++YNS I    +      +++LL EM   G+ PDV +Y++++       + +E
Sbjct: 460 TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEE 519

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M    +TP   + N  +N   +  + + AL +   +   G VP+ ++Y   I 
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K  R +    +L+E+   G  P+AI+Y   M  C  +  +K  L +L  M   G + 
Sbjct: 580 ACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSP 639

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y + I A  K GR KEAT  + QM T G+  D+ S+N  I+      +   A  +L
Sbjct: 640 DVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVL 699

Query: 311 DEMEKQGFECDKYTH 325
            EM   G   ++ T+
Sbjct: 700 FEMRALGVSPNEATY 714



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 3/240 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDV+TY+ +I +      ++    +   M+  GI+PDVV+ N+ I    +      +
Sbjct: 496 GLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEA 555

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           LD+L EM  MG+ PD  SY + +    +  +  E   + ++M    LTP   ++   ++ 
Sbjct: 556 LDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSA 615

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
              +     AL + R +   G  P++VTYN  I    K GR + A  +L+++   G AP+
Sbjct: 616 CSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPD 675

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             ++   +  C    ++   +E+L  M+  G + +   Y T + A  + G   E  D+M+
Sbjct: 676 VNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCG---EKDDWMQ 732


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 202/418 (48%), Gaps = 23/418 (5%)

Query: 14  VCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           V TF C+A ++EKA  +  +   +GV PDV TY +LID++C+    +   +  + MR  G
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG 353

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            S +VVTY +L+    +   L  + D+ + M++ G PP+  +Y++L+  L + G+  +A 
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413

Query: 133 RVFQDMI----------------CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            V+  +I                   + P   T+  +++GLCK     +A  +   +  +
Sbjct: 414 EVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN 473

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI G CK G++  A+ +   +   G+ P   TYT+++   F++R+  L 
Sbjct: 474 GCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 533

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +++LS M     T +   Y  +I    +IG  ++A   +  M   G   ++V+Y  LI+ 
Sbjct: 534 MKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDG 593

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K GK++ +  L  +M  +G   +  T+ +LI+  C AG +  A   L  M +  +   
Sbjct: 594 LGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKY 653

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
           L+ Y  +V    K  K   ++ + E +E    V  +  Y  ++ N  KA RL  A +L
Sbjct: 654 LQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 201/447 (44%), Gaps = 26/447 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  +L   + II   ++ G  P+   +N L+ +YC    +   Y +L RM + G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPG 211

Query: 77  VVTYNSLIAGA------TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            V YN  I             LL+ +  + +EML      +  +  +   CL  +GK D 
Sbjct: 212 YVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDM 271

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + M+     P T+T++ ++  LC+    + A  +F+ ++  G  P++ TY ILI 
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CKAG +  AR    E+   G + N +TYT ++    + ++     +I + M   G   
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391

Query: 251 DGFGYCTVIAAFVKIGRLKEATD----------------YMEQMVTDGVQLDIVSYNTLI 294
           +   Y  ++    K G +++A +                Y E   TD +  ++V+Y  LI
Sbjct: 392 NTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALI 451

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +  CK  K+  A  LLD M   G E +   +  LIDG CK G I  A+     M+K G+ 
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
             +  Y  ++D + KD ++D A+ V     ES    +  TY++M+  LC+      A KL
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSG 437
           L    + G         A++DGL  SG
Sbjct: 572 LSMMEEKGCSPNVVTYTALIDGLGKSG 598



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 202/455 (44%), Gaps = 26/455 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   + + A  II   +  G +PD  TY+ +I   C+ +  +  + +   M+  G++PD
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPD 322

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  +    DEM  +G   +V +Y +L+H   +  +  +A+ +F 
Sbjct: 323 VYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFN 382

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRM----------------FRGLQKHGFVP 180
            MI     P T T++ +++GLCK      A  +                F G       P
Sbjct: 383 RMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAP 442

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  LI GLCKA ++  A+ +L  +  +G  PN I Y  ++    +  K     E+ 
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF 502

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M + GY      Y ++I A  K  RL  A   + QMV      ++V+Y  +I+  C+ 
Sbjct: 503 LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRI 562

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ + A  LL  ME++G   +  T+T LIDGL K+G +  +      M+  G   N   Y
Sbjct: 563 GECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTY 622

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFT------YSSMVHNLCKAKRLPSASKLLLSC 414
             +++     G +D A ++    E+K ++       Y S+V     +K+  ++  LL   
Sbjct: 623 RVLINHCCAAGLLDEAHSLLS--EMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEEL 678

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              G   +      ++D    +G   EA ++  ++
Sbjct: 679 ESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEM 713



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 5/345 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           + P+VVTY  LID  C+         +L+ M   G  P+ + Y++LI G  +   +  + 
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++   M + G  P V +Y SL+  +F+  + D A +V   M+    TP   T+  M++GL
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           C+      AL++   +++ G  P +VTY  LI GL K+G++  +  +  ++   G APN 
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY  ++  C           +LS MK+  +     GYC+V+  F K  +   +   +E+
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEE 677

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD---KYTHTILIDGLCK 334
           + + G       Y  LI+ + K G+LE A  L  EM +     +   K  +T LI  LC 
Sbjct: 678 LESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL 737

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
           A  ++ A      + + G    L  + C++  L K  K + A+ +
Sbjct: 738 ASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 159/388 (40%), Gaps = 19/388 (4%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
            G  P   TYN L+         D G+ +   M E+G   D  T         +    S 
Sbjct: 34  FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSD 93

Query: 96  SLDLLD-EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
           +L +++ E  ++    D      ++  L +    DEA      M C    P   T+  +L
Sbjct: 94  ALVMIEREDFKL----DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            G  K +      R+   + K G  P    +N L+   C A     A  +LK + D G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV----IAAFVK----IG 266
           P  + Y   +         +L    L A+  K Y       C +     A F +    +G
Sbjct: 210 PGYVAYNIFIGSICGGE--ELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +   A   ++ M+  G   D  +Y+ +I   C+  K+E A+LL  EM+  G   D YT+T
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           ILID  CKAG I+ AR   + M  IG  +N+  Y  ++    K  ++  A ++F  M   
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKL 410
               ++ TYS++V  LCKA  +  A ++
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEV 415



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 36/303 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +++ A+ + +   + G LP V TY  LIDA  +    D    +L++M E+  +P+
Sbjct: 489 FCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPN 548

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY ++I G  R      +L LL  M E G  P+V +Y +L+  L + GK D + ++F 
Sbjct: 549 VVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFI 608

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNA------------------------------ 166
            M      P   T+ +++N  C     D A                              
Sbjct: 609 QMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKF 668

Query: 167 ---LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT---Y 220
              L +   L+ HG VP    Y +LI    KAGRL  A  + KE+ +   + N  +   Y
Sbjct: 669 IASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMY 728

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T++++      + +   E+ S + RKG   +   +  +I   +K+ +  EA      +  
Sbjct: 729 TSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICD 788

Query: 281 DGV 283
           +GV
Sbjct: 789 EGV 791



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/382 (21%), Positives = 150/382 (39%), Gaps = 77/382 (20%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P  AT+N ++  L      D   R+ + + + GF  +  T     + LCK GR   A  +
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 205 LK---------------------ELGDSGHA-----------PNAITYTTIMKCCFRNRK 232
           ++                      L D   +           PN +TY T++    + ++
Sbjct: 98  IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQ 157

Query: 233 YKLGLEILSAMKRKGYT-----FDGF--GYCTV----------------------IAAFV 263
                 I++ M ++G       F+     YC                        +A  +
Sbjct: 158 LGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNI 217

Query: 264 KIGR------------LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            IG             L  A    E+M+     L+ V+        C  GK + A+ ++ 
Sbjct: 218 FIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIK 277

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M  +GF  D  T++ +I  LC+A  ++ A L  + M  +G + ++  Y  ++D   K G
Sbjct: 278 VMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAG 337

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
            I+ A + F+ M       +  TY++++H   KAK+LP AS +    + +G         
Sbjct: 338 LIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYS 397

Query: 428 AVVDGLRHSGCRREAKKIQSKI 449
           A+VDGL  +G  ++A ++ +K+
Sbjct: 398 ALVDGLCKAGEIQKACEVYTKL 419



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/323 (19%), Positives = 125/323 (38%), Gaps = 48/323 (14%)

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           L+  G+ P   TYN L++ L  AG++     + KE+ +SG   +  T     +   +  +
Sbjct: 31  LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
           +    + L  ++R+ +  D      +I+  ++     EA  ++ +M  +    ++V+Y T
Sbjct: 91  WS---DALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 147

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           L+  + K+ +L     +++ M K+G   +      L+   C A +   A   L+ M   G
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207

Query: 353 FDSNLEAYN--------------------------------CIVDRLGKD---------G 371
                 AYN                                C+++++            G
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K D A  + + M     V D+ TYS ++  LC+A ++  A  L       GV        
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 428 AVVDGLRHSGCRREAKKIQSKIR 450
            ++D    +G   +A+    ++R
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMR 350


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 216/482 (44%), Gaps = 85/482 (17%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIID------GIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           R  N  +  F +A R   A+A          G R+   P++ TYN+++ + C     D  
Sbjct: 120 RSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIA--PNLQTYNIILRSLCARGDVDRA 177

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            ++ + +R  G++PD VTY++L++G  ++  L  +LDLLDEM   G+  D   YN+L+  
Sbjct: 178 VSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSG 237

Query: 122 LF------------------------------------QLGKPDEANRVFQDMICGDLTP 145
            F                                    +LG+  EA  V+  M+  +   
Sbjct: 238 CFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQA 297

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-------- 197
            T T+ I+++GLC++   D+A R++  + K G V ++  YN LIKG C+ GR        
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW 357

Query: 198 --------------------------LRTARWILKEL-GDSGHAPNAITYTTIMKCCFRN 230
                                     +  A  +LK+L  D+  +P+ +T+ T++     N
Sbjct: 358 DSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCEN 417

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                  EIL   +  G   D F Y ++I  F K GR  +A +  + MV DG + +   Y
Sbjct: 418 GYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVY 477

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N LIN +C+  K+  A  +  EM   G      T+  LIDGLCKA   + A    + M +
Sbjct: 478 NALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLE 537

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFES-----MEVKDSFTYSSMVHNLCKAKRLP 405
            GF  ++  Y  ++  L +D K+D A+ +++      ++V D   ++ ++H LC A ++ 
Sbjct: 538 RGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQV-DVMVHNILIHGLCSAGKVD 596

Query: 406 SA 407
            A
Sbjct: 597 EA 598



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 216/439 (49%), Gaps = 9/439 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C    +++A ++     R GV PD VTY+ L+    +    D    +L+ M  
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPN 221

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPD 129
            G+  D V YN+L++G  R  +   ++ + ++++ + G  P++ +Y  ++  L +LG+  
Sbjct: 222 YGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFK 281

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  V+  M+  +    T T+ I+++GLC++   D+A R++  + K G V ++  YN LI
Sbjct: 282 EAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLI 341

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY- 248
           KG C+ GR   A       G SG      TY  + K    +       E+L  ++     
Sbjct: 342 KGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASC 400

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D   + T+I    + G    A + +E     G +LD+ SY+++IN +CK+G+   A  
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE 460

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +   M K G + + + +  LI+G C+   I  A ++++E M   G    +  YN ++D L
Sbjct: 461 VYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE-MTSNGCCPTIITYNTLIDGL 519

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K  K   A ++ + M  +    D  TY+S++  LC+ K++  A ++    L +G+++  
Sbjct: 520 CKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDV 579

Query: 424 SAQKAVVDGLRHSGCRREA 442
                ++ GL  +G   EA
Sbjct: 580 MVHNILIHGLCSAGKVDEA 598



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 187/423 (44%), Gaps = 41/423 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P++ TY +++D  C+   F     + +RM       D VTY  LI G  R+  +  +
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD--------------MICGD 142
             +  +M++ G+  DV  YNSL+    ++G+  EA + +                M  G 
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGL 378

Query: 143 L---------------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L                     +P   TF  +++GLC+N Y + A  +    +  G   +
Sbjct: 379 LDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELD 438

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           + +Y+ +I   CK GR   A  + K +   G  PN+  Y  ++    R  K    ++I  
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G       Y T+I    K  + +EA+   ++M+  G + DI +Y +LI   C++ 
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAY 360
           K++ A  + DE+   G + D   H ILI GLC AG +  A  ++LE M +     NL  Y
Sbjct: 559 KVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLE-MKEKNCSPNLVTY 617

Query: 361 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++D   + G ID A +++ ++       D  TY++ +  LC   R P    LL   L 
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677

Query: 417 SGV 419
           +G+
Sbjct: 678 TGI 680



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 185/397 (46%), Gaps = 35/397 (8%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-------FVSFDAG--- 61
           I +   C++  ++ A  +  D ++ G++ DV  YN LI  +C+       +  +D+    
Sbjct: 304 ILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFS 363

Query: 62  -------YTILNR------------------MREAGISPDVVTYNSLIAGATRNSLLSCS 96
                  Y I+ +                    +A  SPD VT+ +LI G   N   + +
Sbjct: 364 GIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRA 423

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            ++L++    G   DV+SY+S+++   + G+  +AN V+++M+     P +  +N ++NG
Sbjct: 424 FEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALING 483

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+    ++A++++  +  +G  P ++TYN LI GLCKA + + A  + KE+ + G  P+
Sbjct: 484 FCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPD 543

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY ++++   R++K  + L I   +   G   D   +  +I      G++ EA     
Sbjct: 544 IRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYL 603

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M       ++V+YNTL++ + + G ++ A  L   +   G + D  T+   I GLC   
Sbjct: 604 EMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCN 663

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
                 L L  +   G    +  ++ +V  + K G I
Sbjct: 664 RTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 119/226 (52%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ + N  +  FC+ +++  A  I I+    G  P ++TYN LID  C+   +    +
Sbjct: 471 KPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASS 530

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M E G  PD+ TY SLI G  R+  +  +L + DE+L+ G+  DV  +N L+H L 
Sbjct: 531 LTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLC 590

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             GK DEA  ++ +M   + +P   T+N +++G  +    D A  ++  +  +G  P++V
Sbjct: 591 SAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIV 650

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           TYN  IKGLC   R      +L E+  +G  P  IT++ +++   +
Sbjct: 651 TYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 150/323 (46%), Gaps = 35/323 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+     +A  I+ D    G   DV +Y+ +I+ +C+         +   M + G  P+
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              YN+LI G  R S ++ ++ +  EM   G  P + +YN+L+  L +  K  EA+ + +
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P   T+  ++ GLC+++  D ALR++  +   G   +++ +NILI GLC AG
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAG 593

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  I  E+ +   +PN +TY T+M                          DG    
Sbjct: 594 KVDEAFCIYLEMKEKNCSPNLVTYNTLM--------------------------DG---- 623

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                F +IG + +A      ++ +G++ DIV+YNT I   C   +     LLL+E+   
Sbjct: 624 -----FYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLAT 678

Query: 317 GFECDKYTHTILIDGLCKAGNIK 339
           G      T +IL+  + K G I+
Sbjct: 679 GIMPTVITWSILVRAVIKYGPIQ 701


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 193/385 (50%), Gaps = 3/385 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + T  +LI+ YC        +++L  + + G  P++VT+N+LI G   N ++S +
Sbjct: 85  GITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKA 144

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +    +++  G P D +SY SL++ L + G+  +A ++ Q M    + P   T++ +++G
Sbjct: 145 MAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDG 204

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK+R   +ALR+F  +   G + ++V YN LI G C  G+ R A  +L  +      P+
Sbjct: 205 LCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPD 264

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    +  +      + + M ++G   D   Y  ++  F     + EA +   
Sbjct: 265 DYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFN 324

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV  G++ D+++YN LIN YCK   ++ A +L  E+  +    +  T+  LIDGLCK G
Sbjct: 325 RMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLG 384

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFTYSS 393
            +   +  ++ M   G   ++  YN  +D   K    + AI++F  +      D + Y  
Sbjct: 385 RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDV 444

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSG 418
           +V N CK ++L  A + L   L  G
Sbjct: 445 IVENFCKGEKLKIAEEALQHLLIHG 469



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 200/414 (48%), Gaps = 5/414 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FC    + KA A  +D +  G   D  +Y  LI+  C+         +L +M 
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKME 187

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  + P+++TY+++I G  ++ L++ +L L   +   GI  DV +YNSL+H    +G+  
Sbjct: 188 EDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWR 247

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA R+   M+ G++ P   TFNI+++ LCK      A  +F  + K G  P++VTYN L+
Sbjct: 248 EATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALM 307

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G C +  +  AR +   +   G  P+ + Y  ++    +       + +   ++ K   
Sbjct: 308 EGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLV 367

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y ++I    K+GR+    + +++M   G   DIV+YN  ++ +CK    E A  L
Sbjct: 368 PNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             ++  QG   D Y + ++++  CK   +K A   L+++   G   N+  Y  +++ L K
Sbjct: 428 FRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCK 486

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           D   D A+ +   M+      D+ T+ +++  L +      A KL L  ++ G+
Sbjct: 487 DCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 39/351 (11%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            + ML    PP ++ ++ L+  + ++G    A  +F  +    +TP  AT  I++N  C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNIL------------------------------- 188
             +   A  +   + K GF P +VT+N L                               
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 189 ----IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
               I GLCK G+ R A  +L+++ +    PN ITY+T++    ++R     L + S + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   D   Y ++I     +G+ +EAT  +  MV   +  D  ++N L++  CKEG++ 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +   M K+G + D  T+  L++G C + N+  AR     M K G + ++  YN ++
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 365 DRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 411
           +   K   +D A+ +F+ +  K+      TY+S++  LCK  R+    +L+
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 138/277 (49%), Gaps = 1/277 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V   CK  R+ +A+ +    ++ G  PD+VTYN L++ +C   +      + NRM 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PDV+ YN LI G  +  ++  ++ L  E+    + P++ +YNSL+  L +LG+  
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               +  +M     +P   T+NI L+  CK++  + A+ +FR + + G  P+   Y++++
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIV 446

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +  CK  +L+ A   L+ L   G  PN  TYT ++    ++  +   + +LS M      
Sbjct: 447 ENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCP 506

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            D   + T+I A  +     +A     +M+  G+  D
Sbjct: 507 PDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 4/296 (1%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+    F  M+     P    F+ +L  + +  +   A+ +F  L   G  P + T  IL
Sbjct: 37  DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I   C    L  A  +L  +   G  PN +T+ T++     N      +     +  KGY
Sbjct: 97  INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D F Y ++I    K G+ ++A   +++M  D V+ ++++Y+T+I+  CK+  +  A  
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +  +G   D   +  LI G C  G  + A   L  M +   + +   +N +VD L 
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALC 276

Query: 369 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           K+G+I  A  VF  M    E  D  TY++++   C +  +  A +L    +K G+ 
Sbjct: 277 KEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 7/291 (2%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D  L   R L+KH   P +  ++ L+  + + G   TA  +  +L   G  P+  T T +
Sbjct: 38  DTLLSFNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + C            +L  + + G+  +   + T+I  F   G + +A  +   ++  G 
Sbjct: 97  INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
            LD  SY +LIN  CK G+   A  LL +ME+     +  T++ +IDGLCK   I  A  
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNL 398
               +   G   ++ AYN ++      G+   A  +  +M V+     D +T++ +V  L
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL-TMMVRGNINPDDYTFNILVDAL 275

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           CK  R+  A  +    +K G +       A+++G   S    EA+++ +++
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM 326



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + ++ V  FCK  +L+ AE  +   +  G  P+V TY ++I+A C+  SFD   T+L++M
Sbjct: 441 MYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKM 500

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
            +    PD VT+ ++I      +    +  L  EM+E G+  D
Sbjct: 501 DDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 185/373 (49%), Gaps = 5/373 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P +  YN +I   C+       Y +L +M E  I P+V TY  L+ G  R++    + ++
Sbjct: 86  PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREV 145

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM   G  P+  +Y +L+  L + G+ DEA RV  +    +L     T   ++ GLCK
Sbjct: 146 FQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCK 205

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKELGDSGHAPNAI 218
               D+AL+    +++ G  P  VTY+ L+ G  + G L R  R+  +E    G +  A 
Sbjct: 206 ASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAA 265

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y   +    +        + +  +++ G   D   Y  +I  F + G+   + + +E M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             +GV+ D+V+Y+TLIN+ CKE K + A+ LL+ ME  G   +  T+  ++DGLCK+G +
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKM 385

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE----SMEVKDSFTYSSM 394
                  E M K     ++  Y+ I++ L K G +D A+ +FE    S E  D+  YS +
Sbjct: 386 DEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMV 445

Query: 395 VHNLCKAKRLPSA 407
           + +LC+A +L  A
Sbjct: 446 ITSLCRAGKLEEA 458



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 190/381 (49%), Gaps = 8/381 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI-SPDVVTYNSLIAGATRNSLLSC 95
           GV+    TY +++D  C     +    ++  +  +G+ +P +  YN +I G  R S +  
Sbjct: 49  GVVYGETTYKLVVDGLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMD 106

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  +L++M+E  I P+V++Y  L++ L +  K   A  VFQ+M      P   T+  ++ 
Sbjct: 107 AYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQ 166

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L +    D ALR+    +      +++T   ++ GLCKA RL  A   ++E+   G  P
Sbjct: 167 HLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           N +TY+ ++    ++ +    +      K RKG + +   Y   + A  K G L  A   
Sbjct: 227 NEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKS 286

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +E++   GV  D+V+Y+ LIN + + G+ +A+  LL++M + G + D  T++ LI+ LCK
Sbjct: 287 VEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCK 346

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
               + A   LE M   G   N+  YN ++D L K GK+D    V+E M       D  T
Sbjct: 347 ERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVT 406

Query: 391 YSSMVHNLCKAKRLPSASKLL 411
           YS +++ L KA  L SA KL 
Sbjct: 407 YSIIMNGLSKAGMLDSAVKLF 427



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 41/383 (10%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           ++E G+  D  ++  L   LF+  K  E  R+F  +    +     T+ ++++GLC    
Sbjct: 10  VVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGM 69

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + AL + R L    + P L  YN +I GLC+A R+  A  +L+++ +    PN  TYT 
Sbjct: 70  ANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTI 128

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    R+ K KL  E+   MKR G   +   Y T+I    + G + EA   M +  +  
Sbjct: 129 LLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE 188

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI------------- 329
           +  D+++  T++   CK  +L+ A   ++EM + G   ++ T++ L+             
Sbjct: 189 LPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVI 248

Query: 330 -----------------------DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
                                  D LCKAG +  AR  +E + + G   ++  Y+ +++ 
Sbjct: 249 RFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINT 308

Query: 367 LGKDGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             + G+ D ++ + E M    VK D  TYS++++ LCK ++   A +LL     +G    
Sbjct: 309 FARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPN 368

Query: 423 KSAQKAVVDGLRHSGCRREAKKI 445
                +V+DGL  SG   E  ++
Sbjct: 369 VVTYNSVMDGLCKSGKMDEVHRV 391



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 111/185 (60%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  L++A   + +  + GV+PDVVTY+MLI+ + +   FDA   +L  MR  G+ PD
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY++LI    +      +  LL+ M   G PP+V +YNS+M  L + GK DE +RV++
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+    +P   T++I++NGL K    D+A+++F  ++     P+   Y+++I  LC+AG
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAG 453

Query: 197 RLRTA 201
           +L  A
Sbjct: 454 KLEEA 458



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 44/310 (14%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI---------------- 49
           ++  CT      CKA+RL+ A   + +  ++GV P+ VTY+ L+                
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251

Query: 50  --------------------DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR 89
                               DA C+    D     +  +R++G+ PDVVTY+ LI    R
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311

Query: 90  NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
                 SL+LL++M   G+ PDV +Y++L++ L +  K  +A R+ + M      P   T
Sbjct: 312 AGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVT 371

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N +++GLCK+   D   R++  + K    P++VTY+I++ GL KAG L +A  + + + 
Sbjct: 372 YNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            S   P+A  Y+ ++    R  K +    +   M+    T  G   C  +A  V      
Sbjct: 432 SSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME---VTVAGDNICRALAGLVAALCDA 488

Query: 270 EATDYMEQMV 279
           E TD   ++V
Sbjct: 489 ERTDSARRIV 498



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 10/187 (5%)

Query: 271 ATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           A   +E+ V + GV++D  ++  L     +  K      L   +  +G    + T+ +++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 330 DGLCKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           DGLC AG    A   LE + ++   +   L  YN I+  L +  ++  A  V E M    
Sbjct: 62  DGLCGAGMANQA---LELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEES 118

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            V + FTY+ +++ LC++ +   A ++     ++G +        ++  L  +G   EA 
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178

Query: 444 KIQSKIR 450
           ++  + R
Sbjct: 179 RVMIEQR 185


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 217/461 (47%), Gaps = 61/461 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A+++E A  +  +  R G++ DV TY +++D++C+    +      N MRE G +P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           VVTY +LI    +   +S + +L + ML  G  P++ +Y++L+  HC  + G+ ++A ++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC--KAGQVEKACQI 610

Query: 135 FQDMICGDLT-----------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           F+ M CG                    P   T+  +L+G CK+   + A ++   +   G
Sbjct: 611 FERM-CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P  + Y+ LI GLCK G+L  A+ +  E+ + G      TY++++   F+ ++  L  
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++LS M       +   Y  +I    K+G+  EA   M+ M   G Q ++V+Y  +I+ +
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--------- 348
              GK+E    LL+ M  +G   +  T+ +LID  CK G +  A   LE M         
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 349 ---------------------NKIGFDSN---LEAYNCIVDRLGKDGKIDHAINVFESME 384
                                ++IG D     L  Y  ++D L K  +++ A+ + E + 
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909

Query: 385 ------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
                 V  S TY+S++ +LC A ++ +A +L     K GV
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 16/393 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + EKA ++I + I  G +PD  TY+ +++  C     +  + +   M+  G+  D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  ++    +  L+  +    +EM E+G  P+V +Y +L+H   +  K   AN +F+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL-------------- 182
            M+     P   T++ +++G CK    + A ++F  +     VP++              
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 183 --VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             VTY  L+ G CK+ R+  AR +L  +   G  PN I Y  ++    +  K     E+ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M   G+    + Y ++I  + K+ R   A+  + +M+ +    ++V Y  +I+  CK 
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK + AY L+  ME++G + +  T+T +IDG    G I+     LE M   G   N   Y
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
             ++D   K+G +D A N+ E M+     T+++
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 28/424 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P    +N L+ AYC        Y +L +M + G  P  V YN LI G+      S +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLN 425

Query: 97  LDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
            DLLD       EML  G+  +  + +S   CL   GK ++A  V ++MI     P T+T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           ++ +LN LC     + A  +F  +++ G V ++ TY I++   CKAG +  AR    E+ 
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G  PN +TYT ++    + +K     E+   M  +G   +   Y  +I    K G+++
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605

Query: 270 EATDYMEQM-----VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +A    E+M     V D             + ++V+Y  L++ +CK  ++E A  LLD M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G E ++  +  LIDGLCK G +  A+     M++ GF + L  Y+ ++DR  K  + 
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  V   M       +   Y+ M+  LCK  +   A KL+    + G +       A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 430 VDGL 433
           +DG 
Sbjct: 786 IDGF 789



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 201/441 (45%), Gaps = 26/441 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  +  +A  ++        +PD V Y  LI   C+   F+     LNRMR     P
Sbjct: 279 SLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY++L+ G      L     +L+ M+  G  P    +NSL+H     G    A ++ 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 136 QDMI-CGDLTPCTATFNIMLNGLCKNRYT------DNALRMFRGLQKHGFVPELVTYNIL 188
           + M+ CG + P    +NI++  +C ++ +      D A + +  +   G V   +  +  
Sbjct: 396 KKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            + LC AG+   A  +++E+   G  P+  TY+ ++       K +L   +   MKR G 
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  ++ +F K G +++A  +  +M   G   ++V+Y  LI+ Y K  K+  A  
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L + M  +G   +  T++ LIDG CKAG ++ A    E M       +++ Y    D   
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD--- 631

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
                       ++ E  +  TY +++   CK+ R+  A KLL +    G    +    A
Sbjct: 632 ------------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679

Query: 429 VVDGLRHSGCRREAKKIQSKI 449
           ++DGL   G   EA+++++++
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEM 700



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 172/352 (48%), Gaps = 7/352 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTY  L+D +C+    +    +L+ M   G  P+ + Y++LI G  +   L  + ++
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM E G P  +++Y+SL+   F++ + D A++V   M+     P    +  M++GLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              TD A ++ + +++ G  P +VTY  +I G    G++ T   +L+ +G  G APN +T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++  C +N    +   +L  MK+  +     GY  VI  F K     E+   ++++ 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI--LIDGLCKAGN 337
            D     +  Y  LI+   K  +LE A  LL+E+         Y+ T   LI+ LC A  
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA---INVFESMEVK 386
           ++ A      M K G    ++++  ++  L ++ KI  A   ++    ME++
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 193/431 (44%), Gaps = 20/431 (4%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L+ AE    + +  GV+ + +  +      C    ++  ++++  M   G  PD  TY+ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++      S +  +  L +EM   G+  DV++Y  ++    + G  ++A + F +M    
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
            TP   T+  +++   K +    A  +F  +   G +P +VTY+ LI G CKAG++  A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 203 WIL----------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            I                 K+  D+   PN +TY  ++    ++ + +   ++L AM  +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I    K+G+L EA +   +M   G    + +Y++LI+ Y K  + + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +L +M +     +   +T +IDGLCK G    A   ++ M + G   N+  Y  ++D 
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            G  GKI+  + + E M  K    +  TY  ++ + CK   L  A  LL    ++     
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848

Query: 423 KSAQKAVVDGL 433
            +  + V++G 
Sbjct: 849 TAGYRKVIEGF 859



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 173/411 (42%), Gaps = 48/411 (11%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+L+  +C+  SF      L R+++    P   TYN LI    +   L  +  +  EM  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             +  D ++     + L ++GK  EA  + +     +  P T  +  +++GLC+    + 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 320

Query: 166 ALRMFRGLQKHGFVPELVTY-----------------------------------NILIK 190
           A+     ++    +P +VTY                                   N L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMK 244
             C +G    A  +LK++   GH P  + Y  ++     ++         L  +  S M 
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +     +        G+ ++A   + +M+  G   D  +Y+ ++N  C   K+E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+LL +EM++ G   D YT+TI++D  CKAG I+ AR     M ++G   N+  Y  ++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               K  K+ +A  +FE+M     + +  TYS+++   CKA ++  A ++ 
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 9/274 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R + A  ++   +     P+VV Y  +ID  C+    D  Y ++  M E G  P+
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLFQLGKPDEANRVF 135
           VVTY ++I G      +   L+LL+ M   G+ P+  +Y  L+ HC  + G  D A+ + 
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC-KNGALDVAHNLL 837

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M        TA +  ++ G   N+    +L +   + +    P L  Y +LI  L KA
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 196 GRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            RL  A  +L+E+    +     + TY ++++      K +   ++ S M +KG   +  
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955

Query: 254 GYCTVIAAFVKIGRLKEA---TDYMEQMVTDGVQ 284
            +C++I    +  ++ EA    D++  M    ++
Sbjct: 956 SFCSLIKGLFRNSKISEALLLLDFISHMEIQWIE 989



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 141/335 (42%), Gaps = 35/335 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +L++A+ +  +    G    + TY+ LID Y +    D    +L++M E   +P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  +I G  +      +  L+  M E G  P+V +Y +++     +GK +    + +
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+ ++++  CKN   D A  +   +++  +      Y  +I+G  K  
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-- 861

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               +  +L E+G    AP    Y  ++    + ++ ++ L +L  +             
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV------------A 909

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T  A  V         DY              +YN+LI   C   K+E A+ L  EM K+
Sbjct: 910 TFSATLV---------DYSS------------TYNSLIESLCLANKVETAFQLFSEMTKK 948

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           G   +  +   LI GL +   I  A L L++++ +
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 124/342 (36%), Gaps = 87/342 (25%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
            N+++   C+N     AL     L+   F P   TYN LI+   KA RL +A  I +E+ 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
            +    +  T       CF     K+G   E L+ ++ + +  D   Y  +I+   +   
Sbjct: 263 LANLRMDGFTLR-----CFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL 317

Query: 268 LKEATDYMEQMVTDGVQLDIVSY-----------------------------------NT 292
            +EA D++ +M       ++V+Y                                   N+
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG--------------------- 331
           L++ YC  G    AY LL +M K G       + ILI                       
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437

Query: 332 --------------------LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
                               LC AG  + A   +  M   GF  +   Y+ +++ L    
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
           K++ A  +FE M+    V D +TY+ MV + CKA  +  A K
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 192/390 (49%), Gaps = 17/390 (4%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P   + N L+        F+    +   + ++G  PD V Y   +  A     L   
Sbjct: 117 GFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKG 176

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L+  M++ G+ P V++YN ++  L ++ +  +A ++F +MI  ++ P T T+N +++G
Sbjct: 177 FELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + AL     +++      LVTYN L+ GLC +GR+  AR +L E+  SG  P 
Sbjct: 237 YCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG 296

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
                  +   F +     G + L     K    D   YC ++    ++GR+++A + + 
Sbjct: 297 G-----FLSFVFDDHSNGAGDDGL--FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLA 349

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++V +GV    +SYN L+N YC+EG ++ A L  ++ME++G E ++ T   +I   C+ G
Sbjct: 350 KLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETG 409

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-------F 389
            +  A   +  M + G    +E YN +++  G+ G   H +  FE ++  D         
Sbjct: 410 EVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKG---HFVRCFEFLDEMDKAGIKPNVI 466

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +Y S+++ LCK ++L  A  +L   +  GV
Sbjct: 467 SYGSLINCLCKDRKLIDAEIVLADMIGRGV 496



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 34/446 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           STR +N  + T   +   EK  A+  D I  G  PD V Y   + A       D G+ ++
Sbjct: 121 STRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELM 180

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M + G+ P V  YN ++ G  +   +  +  L DEM++  + P+  +YN+L+    ++
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKV 240

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP----- 180
           G  +EA    + M   ++     T+N +LNGLC +   D+A  +   ++  GF+P     
Sbjct: 241 GGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLS 300

Query: 181 -----------------------ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
                                  +  TY IL+ GLC+ GR+  A  +L +L ++G  P+ 
Sbjct: 301 FVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSK 360

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           I+Y  ++    +    K  +     M+ +G   +   + TVI+ F + G +  A  ++ +
Sbjct: 361 ISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRR 420

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV  GV   + +YN+LIN Y ++G     +  LDEM+K G + +  ++  LI+ LCK   
Sbjct: 421 MVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRK 480

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYS 392
           +  A + L  M   G   N E YN +++      K+  A   F+ M ++        TY+
Sbjct: 481 LIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEM-IQSGIDATLVTYN 539

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++++ L +  R+  A  L L     G
Sbjct: 540 TLINGLGRNGRVKKAEDLFLQMAGKG 565



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 197/442 (44%), Gaps = 69/442 (15%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--------- 54
           ++  R   I +   C+  R+EKAE ++   +  GV P  ++YN+L++AYCQ         
Sbjct: 322 RIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAIL 381

Query: 55  -------------FVSF-------------DAGYTILNRMREAGISPDVVTYNSLIAGAT 88
                         ++F             D   T + RM E G+SP V TYNSLI G  
Sbjct: 382 TTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYG 441

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           +        + LDEM + GI P+V SY SL++CL +  K  +A  V  DMI   ++P   
Sbjct: 442 QKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAE 501

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +N+++   C      +A R F  + + G    LVTYN LI GL + GR++ A  +  ++
Sbjct: 502 IYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM 561

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-----TF------------- 250
              G  P+ ITY +++    ++   +  LE+   MK  G      TF             
Sbjct: 562 AGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV 621

Query: 251 ----------------DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
                           D F Y  +I ++ + G + +A    +QMV  GV  D V+YN+LI
Sbjct: 622 TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLI 681

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             Y ++ ++     L+D+M+ +G      T+ ILI GLC   +  GA      M + G  
Sbjct: 682 LAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLL 741

Query: 355 SNLEAYNCIVDRLGKDGKIDHA 376
            N+     ++  L ++G +  A
Sbjct: 742 LNVSMCYQLISGLREEGMLREA 763



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 199/475 (41%), Gaps = 66/475 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAY------------------ 52
           N+ +   CK  R++ A  +  + I+  ++P+ VTYN LID Y                  
Sbjct: 196 NLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKE 255

Query: 53  ----CQFVSF-------------DAGYTILNRMREAGISP-------------------- 75
               C  V++             D    +L  M  +G  P                    
Sbjct: 256 QNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGL 315

Query: 76  --------DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
                   D  TY  L+ G  R   +  + ++L +++E G+ P   SYN L++   Q G 
Sbjct: 316 FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGD 375

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A    + M    L P   TFN +++  C+    D+A    R + + G  P + TYN 
Sbjct: 376 VKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNS 435

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G  + G        L E+  +G  PN I+Y +++ C  ++RK      +L+ M  +G
Sbjct: 436 LINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRG 495

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            + +   Y  +I A   + +LK+A  + ++M+  G+   +V+YNTLIN   + G+++ A 
Sbjct: 496 VSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAE 555

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  +M  +G   D  T+  LI G  K+ N +      + M  +G    +  ++ ++   
Sbjct: 556 DLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC 615

Query: 368 GKDGKI--DHAINVFESME-VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            K+G +  D        M+ V D F Y+ M+++  +   +  A  L    +  GV
Sbjct: 616 RKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGV 670



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 5/280 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D A  ++  ++K GFVP   + N L++ L  +        +  ++ DSG  P+A+ Y   
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKA 163

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           ++     +    G E++ +M + G     F Y  V+    K+ R+K+A    ++M+   +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNM 223

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             + V+YNTLI+ YCK G +E A    + M++Q  EC+  T+  L++GLC +G +  AR 
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAK 402
            L  M   GF      +   V     +G  D  +  F+  E++ D  TY  +++ LC+  
Sbjct: 284 VLLEMEGSGFLPG--GFLSFVFDDHSNGAGDDGL--FDGKEIRIDERTYCILLNGLCRVG 339

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           R+  A ++L   +++GV   K +   +V+     G  ++A
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKA 379



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 36/237 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    +  R++KAE + +     G  PDV+TYN LI  Y + V+      + ++M+ 
Sbjct: 539 NTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKI 598

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG---- 126
            GI P V T++ LI    +  +++    +  EML+M + PD + YN +++   + G    
Sbjct: 599 LGIKPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMK 657

Query: 127 -------------------------------KPDEANRVFQDMICGDLTPCTATFNIMLN 155
                                          +  E   +  DM    L P   T+NI++ 
Sbjct: 658 AMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIK 717

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           GLC  +  + A   +R + + G +  +     LI GL + G LR A+ +  EL   G
Sbjct: 718 GLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGG 774


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 3/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            NI +   CK  +L KA  +  D    G+ P VVTYN +ID YC+       Y    +L 
Sbjct: 188 FNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLK 247

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M EAGISP+ VT+N L+ G  ++S  + ++ + +EM + GI   V +Y++L+  L   G
Sbjct: 248 EMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEG 307

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +E  ++  +M    L P  AT N +LNG CK     +A      +++    P +VTY 
Sbjct: 308 KVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYT 367

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           IL+ G  +  +++ A  + + +   G  PNA  Y  ++    RN  ++    +L  M+ K
Sbjct: 368 ILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMK 427

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I A    G +++A   +++M+  G++   ++YNT+IN YC++G +++A
Sbjct: 428 GVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSA 487

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           Y +   MEK     +  T+ + I  LC+ G ++     L  M + G   N   Y+ I + 
Sbjct: 488 YEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547

Query: 367 LGKDG 371
           + + G
Sbjct: 548 MMEKG 552



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 191/403 (47%), Gaps = 7/403 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N  +     A R++ AE      +R  V PD+ T+N++I   C+         +   +R
Sbjct: 153 VNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIR 212

Query: 70  EAGISPDVVTYNSLIAG---ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
             G++P VVTYN++I G     R   +     LL EM+E GI P+  ++N L++   +  
Sbjct: 213 AWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDS 272

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               A RVF++M    +     T++ ++ GLC     +  +++   ++  G VP L T N
Sbjct: 273 NTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLN 332

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            ++ G CK G +  A   +  +      PN +TYT ++    R  K K  L +  AM  K
Sbjct: 333 SVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGK 392

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +IA F + G  +  +  +++M   GV+ DIV+YN LI   C +G++  A
Sbjct: 393 GVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKA 452

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD- 365
             LLDEM   G E    T+  +I+G C+ GNIK A      M K    +N+  YN  +  
Sbjct: 453 VKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKC 512

Query: 366 --RLGKDGKIDHAIN-VFESMEVKDSFTYSSMVHNLCKAKRLP 405
             R+GK  + +  +N + E   V +  TY ++   + +    P
Sbjct: 513 LCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTP 555



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 172/351 (49%), Gaps = 7/351 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P  +S N L+  L    + D A R F+  +   ++P   TFNI+++GLCK      A  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 170 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            + ++  G  P +VTYN +I G CK   AGR+     +LKE+ ++G +PN +T+  ++  
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             ++      + +   MK++G       Y  ++      G+++E    +++M   G+  +
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           + + N+++N +CK+G +  A   +D ME++  + +  T+TIL+DG  +   +K A    E
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M+  G   N   YNC++    ++G       + + M +K    D  TY+ ++  LC   
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            +  A KLL   L  G+  +      +++G    G  + A +I++++   K
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 116/246 (47%), Gaps = 16/246 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  +  FCK   +  AE  I    +  V P+VVTY +L+D Y +         +   M 
Sbjct: 331 LNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMS 390

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+   YN LIAG TRN        LLDEM   G+  D+ +YN L+  L   G+  
Sbjct: 391 GKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVR 450

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A ++  +M+   L P   T+N ++NG C+     +A  +   ++K      +VTYN+ I
Sbjct: 451 KAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFI 510

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           K LC+ G++     +L E+ + G  PN +TY TI +                 M  KGYT
Sbjct: 511 KCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKE----------------GMMEKGYT 554

Query: 250 FDGFGY 255
            D  G+
Sbjct: 555 PDVRGF 560



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 7/229 (3%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H P+A +   ++       +  L      A  R+  + D F +  VI+   K G+L++A 
Sbjct: 146 HRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAG 205

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 329
           D  + +   G+   +V+YNT+I+ YCK G+    Y    LL EM + G   ++ T  +L+
Sbjct: 206 DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLV 265

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
           +G CK  N   A    E M + G  +++  Y+ +V  L  +GK++  + + + M+    V
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
            +  T +S+++  CK   +  A   + S  +  V+        +VDG R
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYR 374



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 2/163 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGY 62
           + + R+ N  +  F + N   ++ + ++D +R+ GV  D+VTYN+LI A C         
Sbjct: 395 RPNARIYNCLIAGFTR-NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAV 453

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +L+ M   G+ P  +TYN++I G      +  + ++   M +     +V +YN  + CL
Sbjct: 454 KLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCL 513

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            ++GK +E N +  +M+   L P   T++ +  G+ +  YT +
Sbjct: 514 CRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 217/461 (47%), Gaps = 61/461 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A+++E A  +  +  R G++ DV TY +++D++C+    +      N MRE G +P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           VVTY +LI    +   +S + +L + ML  G  P++ +Y++L+  HC  + G+ ++A ++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC--KAGQVEKACQI 610

Query: 135 FQDMICGDLT-----------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           F+ M CG                    P   T+  +L+G CK+   + A ++   +   G
Sbjct: 611 FERM-CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P  + Y+ LI GLCK G+L  A+ +  E+ + G      TY++++   F+ ++  L  
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++LS M       +   Y  +I    K+G+  EA   M+ M   G Q ++V+Y  +I+ +
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--------- 348
              GK+E    LL+ M  +G   +  T+ +LID  CK G +  A   LE M         
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 349 ---------------------NKIGFDSN---LEAYNCIVDRLGKDGKIDHAINVFESME 384
                                ++IG D     L  Y  ++D L K  +++ A+ + E + 
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909

Query: 385 ------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
                 V  S TY+S++ +LC A ++ +A +L     K GV
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 16/393 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + EKA ++I + I  G +PD  TY+ +++  C     +  + +   M+  G+  D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  ++    +  L+  +    +EM E+G  P+V +Y +L+H   +  K   AN +F+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL-------------- 182
            M+     P   T++ +++G CK    + A ++F  +     VP++              
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 183 --VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             VTY  L+ G CK+ R+  AR +L  +   G  PN I Y  ++    +  K     E+ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M   G+    + Y ++I  + K+ R   A+  + +M+ +    ++V Y  +I+  CK 
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK + AY L+  ME++G + +  T+T +IDG    G I+     LE M   G   N   Y
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
             ++D   K+G +D A N+ E M+     T+++
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 28/424 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P    +N L+ AYC        Y +L +M + G  P  V YN LI G+      S +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLN 425

Query: 97  LDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
            DLLD       EML  G+  +  + +S   CL   GK ++A  V ++MI     P T+T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           ++ +LN LC     + A  +F  +++ G V ++ TY I++   CKAG +  AR    E+ 
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G  PN +TYT ++    + +K     E+   M  +G   +   Y  +I    K G+++
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605

Query: 270 EATDYMEQM-----VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +A    E+M     V D             + ++V+Y  L++ +CK  ++E A  LLD M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G E ++  +  LIDGLCK G +  A+     M++ GF + L  Y+ ++DR  K  + 
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  V   M       +   Y+ M+  LCK  +   A KL+    + G +       A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785

Query: 430 VDGL 433
           +DG 
Sbjct: 786 IDGF 789



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 201/441 (45%), Gaps = 26/441 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  +  +A  ++        +PD V Y  LI   C+   F+     LNRMR     P
Sbjct: 279 SLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY++L+ G      L     +L+ M+  G  P    +NSL+H     G    A ++ 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 136 QDMI-CGDLTPCTATFNIMLNGLCKNRYT------DNALRMFRGLQKHGFVPELVTYNIL 188
           + M+ CG + P    +NI++  +C ++ +      D A + +  +   G V   +  +  
Sbjct: 396 KKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            + LC AG+   A  +++E+   G  P+  TY+ ++       K +L   +   MKR G 
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  ++ +F K G +++A  +  +M   G   ++V+Y  LI+ Y K  K+  A  
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L + M  +G   +  T++ LIDG CKAG ++ A    E M       +++ Y    D   
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD--- 631

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
                       ++ E  +  TY +++   CK+ R+  A KLL +    G    +    A
Sbjct: 632 ------------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679

Query: 429 VVDGLRHSGCRREAKKIQSKI 449
           ++DGL   G   EA+++++++
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEM 700



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 4/340 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTY  L+D +C+    +    +L+ M   G  P+ + Y++LI G  +   L  + ++
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM E G P  +++Y+SL+   F++ + D A++V   M+     P    +  M++GLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              TD A ++ + +++ G  P +VTY  +I G    G++ T   +L+ +G  G APN +T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++  C +N    +   +L  MK+  +     GY  VI  F K     E+   ++++ 
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGN 337
            D     +  Y  LI+   K  +LE A  LL+E+         Y  T+  LI+ LC A  
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           ++ A      M K G    ++++  ++  L ++ KI  A+
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 193/431 (44%), Gaps = 20/431 (4%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L+ AE    + +  GV+ + +  +      C    ++  ++++  M   G  PD  TY+ 
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++      S +  +  L +EM   G+  DV++Y  ++    + G  ++A + F +M    
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
            TP   T+  +++   K +    A  +F  +   G +P +VTY+ LI G CKAG++  A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608

Query: 203 WIL----------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            I                 K+  D+   PN +TY  ++    ++ + +   ++L AM  +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I    K+G+L EA +   +M   G    + +Y++LI+ Y K  + + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +L +M +     +   +T +IDGLCK G    A   ++ M + G   N+  Y  ++D 
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            G  GKI+  + + E M  K    +  TY  ++ + CK   L  A  LL    ++     
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848

Query: 423 KSAQKAVVDGL 433
            +  + V++G 
Sbjct: 849 TAGYRKVIEGF 859



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 173/411 (42%), Gaps = 48/411 (11%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+L+  +C+  SF      L R+++    P   TYN LI    +   L  +  +  EM  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             +  D ++     + L ++GK  EA  + +     +  P T  +  +++GLC+    + 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 320

Query: 166 ALRMFRGLQKHGFVPELVTY-----------------------------------NILIK 190
           A+     ++    +P +VTY                                   N L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMK 244
             C +G    A  +LK++   GH P  + Y  ++     ++         L  +  S M 
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +     +        G+ ++A   + +M+  G   D  +Y+ ++N  C   K+E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+LL +EM++ G   D YT+TI++D  CKAG I+ AR     M ++G   N+  Y  ++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               K  K+ +A  +FE+M     + +  TYS+++   CKA ++  A ++ 
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 9/269 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R + A  ++   +     P+VV Y  +ID  C+    D  Y ++  M E G  P+
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLFQLGKPDEANRVF 135
           VVTY ++I G      +   L+LL+ M   G+ P+  +Y  L+ HC  + G  D A+ + 
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC-KNGALDVAHNLL 837

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M        TA +  ++ G   N+    +L +   + +    P L  Y +LI  L KA
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 196 GRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            RL  A  +L+E+    +     + TY ++++      K +   ++ S M +KG   +  
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955

Query: 254 GYCTVIAAFVKIGRLKEA---TDYMEQMV 279
            +C++I    +  ++ EA    D++  MV
Sbjct: 956 SFCSLIKGLFRNSKISEALLLLDFISHMV 984



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 4/297 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +L++A+ +  +    G    + TY+ LID Y +    D    +L++M E   +P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  +I G  +      +  L+  M E G  P+V +Y +++     +GK +    + +
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+ ++++  CKN   D A  +   +++  +      Y  +I+G  K  
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-- 861

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-- 254
               +  +L E+G    AP    Y  ++    + ++ ++ L +L  +     T   +   
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
           Y ++I +     +++ A     +M   GV  ++ S+ +LI    +  K+  A LLLD
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 124/342 (36%), Gaps = 87/342 (25%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
            N+++   C+N     AL     L+   F P   TYN LI+   KA RL +A  I +E+ 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
            +    +  T       CF     K+G   E L+ ++ + +  D   Y  +I+   +   
Sbjct: 263 LANLRMDGFTLR-----CFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL 317

Query: 268 LKEATDYMEQMVTDGVQLDIVSY-----------------------------------NT 292
            +EA D++ +M       ++V+Y                                   N+
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG--------------------- 331
           L++ YC  G    AY LL +M K G       + ILI                       
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437

Query: 332 --------------------LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
                               LC AG  + A   +  M   GF  +   Y+ +++ L    
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
           K++ A  +FE M+    V D +TY+ MV + CKA  +  A K
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 19  KANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           KA RLE A  ++  +      ++    TYN LI++ C     +  + + + M + G+ P+
Sbjct: 894 KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
           + ++ SLI G  RNS +S +L LLD +  M  P
Sbjct: 954 MQSFCSLIKGLFRNSKISEALLLLDFISHMVCP 986


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 5/406 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K +R E AEAI  D + +G      TY+  I   C+   F+    +L  M  
Sbjct: 48  NRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMET 107

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+  +N  +    R + +  ++     M++ G  PDV SY  L++ LF+ GK  +
Sbjct: 108 LGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTD 167

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP-ELVTYNILI 189
           A  ++  MI   ++P       ++ GLC  R  D A  M     K   V   +V YN LI
Sbjct: 168 AVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALI 227

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CKAGR+  A  +   +   G  P+ +TY  ++   + N   K    +++ M R G  
Sbjct: 228 SGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQ 287

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D + Y  ++    ++        +M + +      D+VSY+TLI  +C+    + AY L
Sbjct: 288 LDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKL 347

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +EM ++G   +  T T LI    + GN   A+  L+ M ++G   +   Y  I+D L K
Sbjct: 348 FEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407

Query: 370 DGKIDHAINVFESM---EV-KDSFTYSSMVHNLCKAKRLPSASKLL 411
            G +D A  +F  M   E+  D+ +Y+S++  LC++ R+  A KL 
Sbjct: 408 SGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 207/438 (47%), Gaps = 17/438 (3%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK  + E  +A++ D   LG +PD+  +N+ +D  C+             M + G 
Sbjct: 86  ISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGR 145

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-N 132
            PDVV+Y  LI G  R   ++ ++++ + M+  G+ PD  +  +L+  L    K D A  
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V +++    +      +N +++G CK    + A  +   + K G  P+LVTYN+L+   
Sbjct: 206 MVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYY 265

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK----CCFRNRKYKLGLEILSAMKRKGY 248
                L+ A  ++ E+  SG   +A +Y  ++K        +R Y     +L  M+ +G+
Sbjct: 266 YDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSF---MLKEMEPRGF 322

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T+I  F +    K+A    E+M   G+  ++V++ +LI  + +EG    A  
Sbjct: 323 C-DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKK 381

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LLD+M + G   D+  +T ++D LCK+GN+  A      M +     +  +YN ++  L 
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLC 441

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + G++  AI +FE M+ K    D  T+  ++  L + K+L +A K+    +  G  +   
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTL--- 498

Query: 425 AQKAVVDGLRHSGCRREA 442
             + V D L  + C   A
Sbjct: 499 -DRDVSDTLIKASCSMSA 515



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 166/383 (43%), Gaps = 42/383 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   C+ N++  A       ++ G  PDVV+Y +LI+   +         I N M 
Sbjct: 117 FNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176

Query: 70  EAGISPD------------------------------------VVTYNSLIAGATRNSLL 93
            +G+SPD                                    +V YN+LI+G  +   +
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRI 236

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  L   M ++G  PD+ +YN L++  +       A  V  +M+   +     ++N +
Sbjct: 237 EKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQL 296

Query: 154 LNGLCKNRYTDNALR-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           L   C+  + D     M + ++  GF  ++V+Y+ LI+  C+A   + A  + +E+   G
Sbjct: 297 LKRHCRVSHPDRCYSFMLKEMEPRGFC-DVVSYSTLIETFCRASNTKKAYKLFEEMRQKG 355

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              N +T+T+++K   R     +  ++L  M   G + D   Y T++    K G + +A 
Sbjct: 356 IVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 330
                M+   +  D +SYN+LI+  C+ G++  A  L ++M  +G EC  D+ T   +I 
Sbjct: 416 GIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIG 473

Query: 331 GLCKAGNIKGARLHLEYMNKIGF 353
           GL +   +  A    + M   GF
Sbjct: 474 GLIREKKLSAAYKVWDQMMDKGF 496



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 35/283 (12%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI-------------- 49
           KLS  + N  +  FCKA R+EKAEA+     ++G  PD+VTYN+L+              
Sbjct: 217 KLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276

Query: 50  ------------DAY---------CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
                       DAY         C+    D  Y+ + +  E     DVV+Y++LI    
Sbjct: 277 VMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFC 336

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           R S    +  L +EM + GI  +V ++ SL+    + G    A ++   M    L+P   
Sbjct: 337 RASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +  +L+ LCK+   D A  +F  + +H   P+ ++YN LI GLC++GR+  A  + +++
Sbjct: 397 FYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
                 P+ +T+  I+    R +K     ++   M  KG+T D
Sbjct: 457 KGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLD 499



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 5/292 (1%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y S +  L + G  D A +VF +M        ++ +N  +  L K    + A  ++R +
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDM 70

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              GF     TY+  I GLCK  +      +L+++   G  P+   +   +    R  K 
Sbjct: 71  MPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKV 130

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              ++    M ++G   D   Y  +I    + G++ +A +    M+  GV  D  +   L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190

Query: 294 INLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +   C   K++ AY ++ +E++    +     +  LI G CKAG I+ A     +M+KIG
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIG 250

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            + +L  YN +++    +  +  A  V   M       D+++Y+ ++   C+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCR 302



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 5/233 (2%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           + Y   I  L K+G +  A  +  E+  S +   +  Y   +    +  +++L   I   
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M   G++   F Y   I+   K+ + +     +  M T G   DI ++N  ++L C+E K
Sbjct: 70  MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A      M ++G E D  ++TILI+GL +AG +  A      M + G   + +A   
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 363 IVDRLGKDGKIDHAINV----FESMEVKDSF-TYSSMVHNLCKAKRLPSASKL 410
           +V  L    K+D A  +     +S  VK S   Y++++   CKA R+  A  L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEAL 242


>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
 gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
          Length = 1070

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 206/451 (45%), Gaps = 20/451 (4%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            K ++   NI VC  CK  +L+ A A+  D I LG    ++ +N LI   C     + GY
Sbjct: 436 AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGY 495

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            I N+M++ G++P   TYNSL  G  R      +LDLL EM   G PP + +   ++  L
Sbjct: 496 GIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQL 555

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              G+  EA +    M+     P   T++  +NG+C     D+AL +FR +    ++P++
Sbjct: 556 CFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDV 615

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V +NILI G  K+ +L  A+ I++E+ + G  P+ +TY  ++  C +  + +  +  L  
Sbjct: 616 VAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDK 675

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  +        Y ++I  F   GR  EA     +M   G   + ++Y   IN   K G+
Sbjct: 676 MVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGR 735

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYN 361
           +E A    +EM  +GFE D ++    I+ L   G  +KG  L  E + K  + +NL+   
Sbjct: 736 IETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKDTYGNNLKMVG 795

Query: 362 CI---VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            I   V  L KDG     I  F    V       S++ + C     PSAS        +G
Sbjct: 796 LINEAVVELSKDGITSSDILKF----VDKGSVDCSLLLSTC-----PSASCNYFPAAYTG 846

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           V        +VV GL   G  R A  +   +
Sbjct: 847 V-------NSVVPGLEARGNWRWALSVTEWV 870



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 210/459 (45%), Gaps = 26/459 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS + L++ V  F K  R++KA  +    +  G + D+  Y++LI+  CQ         
Sbjct: 277 RLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVK 336

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS-YNSLMHCL 122
           +   M+ +G++PDV     +I    R    +     ++E  E      V   YN ++  L
Sbjct: 337 LFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEEL 396

Query: 123 FQLGKPDEANRVFQDMICG-------------------DLTPCTATFNIMLNGLCKNRYT 163
              G+ + A ++ + M+CG                   D  P + +FNI++ GLCK +  
Sbjct: 397 VHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL 456

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D AL + + +   G   +++ +N LI  LC   RL     I  ++ D G  P+  TY ++
Sbjct: 457 DMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSL 516

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT-VIAAFVKIGRLKEATDYMEQMVTDG 282
                R +  K  L++L  M+  G+       CT ++      GR+ EA  +++ M+  G
Sbjct: 517 FYGICRRKDPKAALDLLREMQTNGHP-PWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DIV+Y+  +N  C  G+++ A  L  ++  + +  D   H ILI+G  K+  +  A+
Sbjct: 576 FLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQ 635

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNL 398
             +E M + G   ++  YN ++D   K G+I+ AI+  + M  ++      TY+S++   
Sbjct: 636 KIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGF 695

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           C A R   A KL     + G      A  A ++GLR  G
Sbjct: 696 CSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCG 734



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 183/481 (38%), Gaps = 74/481 (15%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLL 93
            G  P+  TYN L+DA  +    D     L  M  R    S D  T  SL+         
Sbjct: 168 FGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRP 227

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             + D+   M E+G   D     +LM    + GK D A  +   M    +     T +++
Sbjct: 228 DDANDVFQRMSELGWV-DEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVL 286

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G  K    D A+ MF  +  +GFV +L  Y++LI+GLC+   +  A  + KE+  SG 
Sbjct: 287 VHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGV 346

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRL 268
           AP+      +++   R   +     ++     +   +   G     Y  V+   V  G +
Sbjct: 347 APDVRLLKKVIEAFCREGDFA----VIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEV 402

Query: 269 KEATDYMEQMVTDG--VQLDIV-----------------SYNTLINLYCKEGK------- 302
           + A   +  MV  G  V  D+                  S+N ++   CK  K       
Sbjct: 403 EAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALAL 462

Query: 303 ----------------------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                                       LE  Y + ++M+  G    ++T+  L  G+C+
Sbjct: 463 TKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICR 522

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
             + K A   L  M   G    ++    +V +L   G++  A+   + M     + D  T
Sbjct: 523 RKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVT 582

Query: 391 YSSMVHNLCKAKRLPSASKLL--LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           YS+ ++ +C    +  A  L   +SC      ++  A   +++G R S    EA+KI  +
Sbjct: 583 YSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVV--AHNILINGFRKSSKLDEAQKIMEE 640

Query: 449 I 449
           +
Sbjct: 641 M 641



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 9/272 (3%)

Query: 118 LMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           L+ CL   G PD A R F         TP + T+N +L+ L K    D+A    R +   
Sbjct: 144 LLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVAR 203

Query: 177 ---GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G V +  T   L++  C AGR   A  + + + + G     +  TT+M    +  K 
Sbjct: 204 CGDGSV-DKYTLTSLLRCYCNAGRPDDANDVFQRMSELGWVDEHV-LTTLMVAFSKWGKV 261

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L +M+  G          ++  F K GR+ +A D   +MV+ G  +D+  Y+ L
Sbjct: 262 DGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVL 321

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN--IKGARLHLEYMNKI 351
           I   C++  +  A  L  EM+  G   D      +I+  C+ G+  + G  ++ E    +
Sbjct: 322 IEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFIN-ENAEYL 380

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              S +  YN +++ L   G+++ A  +  SM
Sbjct: 381 KSGSVVPLYNVVLEELVHCGEVEAAYQLLRSM 412


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 5/393 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLG 126
           +  AG  PD   +N  +        L  ++ +L  M   G PP + +SYN ++  +++ G
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  VF +M    + P   T+N M++G  K    +   R+   +  HG  P  +TYN
Sbjct: 78  RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +L+ GLC+AGR+     +L E+      P+  TY+ +     RN   K  L +     + 
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 197

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T   +    ++    K G++  A + ++ +V  G+    V YNTLIN YC+ G+LE A
Sbjct: 198 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 257

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +    +M+ +  + D  T+  LI+GLCKA  I  A+  L  M   G +  +E +N ++D 
Sbjct: 258 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 317

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            G+ G+++    V   M+      +  +Y S+V+  CK  ++P A  +L       V   
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 377

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                A++D     G   +A  +  K++   IS
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 410



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 39/485 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +A R   A  +  +     VLP+ +TYN +ID + +    +AG+ + ++M  
Sbjct: 67  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL------------ 118
            G+ P+ +TYN L++G  R   +  +  LLDEM    + PD ++Y+ L            
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186

Query: 119 MHCLF-----------------------QLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           M  LF                       + GK   A  V Q ++   L P    +N ++N
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 246

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C+    + A   F  ++     P+ +TYN LI GLCKA R+  A+ +L E+ D+G  P
Sbjct: 247 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 306

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
              T+ T++    R  + +    +LS M+  G   +   Y +++ AF K G++ EA   +
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M    V  +   YN +I+ Y + G  + A++L+++M+  G      T+ +LI GLC  
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 426

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TY 391
             I  A   +  ++      +  +YN ++      G ID A+++ + M    +K +  TY
Sbjct: 427 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             ++  L  A RL     L    +++ V    +    +V+     G   +A+ ++ ++  
Sbjct: 487 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546

Query: 452 AKISH 456
            + +H
Sbjct: 547 KRNNH 551


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 211/445 (47%), Gaps = 4/445 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  R++ AE +  + +   V P+ +TYN LID YC+    +  + I  RM+ 
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKV 280

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P ++T+NSL+ G  R  ++  +  +L+EM   G  PD ++Y +L     + G  D 
Sbjct: 281 ENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDA 340

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           +  + ++ +   +     T +I+LN LCK    + A  + +   ++G  P  V +N ++ 
Sbjct: 341 SITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+ G +  A   ++++   G  PN +TY +++K     +  +   + +  M  KG   
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  + +          +E+M   G++ +++SY  LIN  CK+  +  A ++L
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL 520

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G   +   + +LIDG C AG +K A    + M        L  YN +++ L K 
Sbjct: 521 GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKK 580

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+  A N+   +  K    D  TY+S++     A  +  A +L  +  KSG++   +  
Sbjct: 581 GKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRM 451
             ++ G    G     K  Q  ++M
Sbjct: 641 HRLIAGCGKEGLVLVEKIYQEMLQM 665



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 223/488 (45%), Gaps = 39/488 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S   LN+ + +     R E    +  + +  G+ PD   Y   I A  +         ++
Sbjct: 146 SVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELM 205

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+SP V  YN +I G  +   +  +  L DEML+  + P+  +YN+L+    ++
Sbjct: 206 TCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKV 265

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EA  + + M   ++ P   TFN +LNGLC+ +  + A R+   ++ +GFVP+  TY
Sbjct: 266 GQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTY 325

Query: 186 -----------------------------------NILIKGLCKAGRLRTARWILKELGD 210
                                              +IL+  LCK G +  A  +LK+  +
Sbjct: 326 TTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLE 385

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           +G AP  + + TI+    +          +  M+  G   +   Y +++  F ++  ++E
Sbjct: 386 NGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEE 445

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +++MV  GV  ++ +YNTLI+ Y +    +  + +L+EMEK+G + +  ++  LI+
Sbjct: 446 AEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLIN 505

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-- 388
            LCK  NI  A + L  M   G   N + YN ++D     GK+  A   F+ M  ++   
Sbjct: 506 CLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVP 565

Query: 389 --FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
              TY+ +++ LCK  ++  A  L     + G+        +++ G   +G  ++A ++ 
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELY 625

Query: 447 SKIRMAKI 454
             ++ + I
Sbjct: 626 ETMKKSGI 633



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 197/443 (44%), Gaps = 32/443 (7%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
             N  V  +C+   + KA   I     +G+ P+ VTYN L+  +C+  + +     + +M
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+ P+V TYN+LI G  R+ L      +L+EM + G+ P+V SY  L++CL +    
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  +  DM+   + P    +N++++G C      +A R F  +     VP LVTYNIL
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNIL 573

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK G++  A  +  E+   G + + ITY +++         +  LE+   MK+ G 
Sbjct: 574 INGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  +IA   K G +     Y E +  + V  D V YN LI+ Y + G ++ A  
Sbjct: 634 KPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVP-DRVIYNALIHCYVEHGDVQKACS 692

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   ME QG + DK T+  LI      G+ K  R+H                   V  L 
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLI-----LGHFKEGRMHK------------------VKNLV 729

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
            D KI   I   E        TY  ++   CK K    A        ++G     S    
Sbjct: 730 NDMKIRGLIPKTE--------TYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDN 781

Query: 429 VVDGLRHSGCRREAKKIQSKIRM 451
           ++ GLR  G   +A  I S++ M
Sbjct: 782 LITGLREEGRSHDADVICSEMNM 804



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 188/376 (50%), Gaps = 1/376 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FC+   +E+AE  I   +  GVLP+V TYN LID Y +   FD  + IL  M +
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+V++Y  LI    +++ +  +  +L +M+  G+ P+   YN L+      GK  +
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R F +M+  ++ P   T+NI++NGLCK      A  +   + + G   +++TYN LI 
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G   AG ++ A  + + +  SG  P   TY  ++  C +     L  +I   M +     
Sbjct: 611 GYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-EGLVLVEKIYQEMLQMNLVP 669

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I  +V+ G +++A      M   G+Q D ++YN LI  + KEG++     L+
Sbjct: 670 DRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLV 729

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ++M+ +G      T+ ILI G CK  +  GA +    M + GF  ++   + ++  L ++
Sbjct: 730 NDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREE 789

Query: 371 GKIDHAINVFESMEVK 386
           G+   A  +   M +K
Sbjct: 790 GRSHDADVICSEMNMK 805



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 194/400 (48%), Gaps = 4/400 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GVLP V + N+ +++      ++    + + + E+G+ PD   Y   I  A +   L  +
Sbjct: 142 GVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRA 201

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L+  M   G+ P V+ YN ++  L +  +  +A ++F +M+   + P   T+N +++G
Sbjct: 202 IELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDG 261

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + A  +   ++     P ++T+N L+ GLC+A  +  A+ +L+E+   G  P+
Sbjct: 262 YCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TYTT+     +       + +     RKG     +    ++ A  K G +++A + ++
Sbjct: 322 RFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLK 381

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + + +G+    V +NT++N YC+ G +  AY  +++ME  G   +  T+  L+   C+  
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK 441

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           N++ A   ++ M + G   N+E YN ++D  G+    D    + E ME K    +  +Y 
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYG 501

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            +++ LCK   +  A  +L   +  GV         ++DG
Sbjct: 502 CLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 173/394 (43%), Gaps = 76/394 (19%)

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           L++  + + ++S S +L   M + G+ P V S N  +  L    + ++  ++F +++   
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L P    +   +    K      A+ +   +++ G  P +  YN++I GLCK  R++ A 
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  E+ D   APN ITY T++                             GYC      
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLID----------------------------GYC------ 263

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K+G+L+EA +  E+M  + V+  I+++N+L+N  C+   +E A  +L+EME  GF  D+
Sbjct: 264 -KVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDR 322

Query: 323 YTHTILIDGLCKAGNI------------KGARLHLEY-----MNKIGFDSNLEA------ 359
           +T+T L DG  K GN+            KG ++ L+Y     +N +  + N+E       
Sbjct: 323 FTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI-LDYTCSILLNALCKEGNMEKAEEVLK 381

Query: 360 -------------YNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 402
                        +N IV+   + G I+ A    E ME      +  TY+S+V   C+ K
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMK 441

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
            +  A K +   ++ GV         ++DG   S
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 21/332 (6%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC-KNRYTD 164
           M +P   +S  S ++ LF L                  TP    F+ ML  +C +++   
Sbjct: 86  MLLPKSPFSSPSHLYTLFSLSS----------------TPMKPLFSDMLLSICSESKMVS 129

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            +  ++  ++K G +P + + N+ ++ L    R      +  E+ +SG  P+   Y   +
Sbjct: 130 ESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAI 189

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           +   +    K  +E+++ MKR G +   F Y  VI    K  R+K+A    ++M+   V 
Sbjct: 190 QAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVA 249

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            + ++YNTLI+ YCK G+LE A+ + + M+ +  E    T   L++GLC+A  ++ A+  
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCK 400
           LE M   GF  +   Y  + D   K G +D +I + E    K      +T S +++ LCK
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK 369

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
              +  A ++L   L++G+  +      +V+G
Sbjct: 370 EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 137/338 (40%), Gaps = 36/338 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   + +AE I+ D +  GV+P+   YNMLID  C        +   + M    I P 
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN LI G  +   +  + +L  E+   G+  DV +YNSL+      G   +A  +++
Sbjct: 567 LVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYE 626

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T++ ++ G C         ++++ + +   VP+ V YN LI    + G
Sbjct: 627 TMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHG 685

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            ++ A                        C              SAM+ +G   D   Y 
Sbjct: 686 DVQKA------------------------CSLH-----------SAMEAQGIQPDKMTYN 710

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K GR+ +  + +  M   G+     +Y+ LI  +CK    + AY+   EM + 
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFEN 770

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           GF         LI GL + G    A +    MN  G D
Sbjct: 771 GFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKD 808



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 1/219 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + ++ N+ +   C A +L+ A     + +   ++P +VTYN+LI+  C+         + 
Sbjct: 531 NAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLA 590

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G+S DV+TYNSLI+G +    +  +L+L + M + GI P + +Y+ L+    + 
Sbjct: 591 SEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKE 650

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G      +++Q+M+  +L P    +N +++   ++     A  +   ++  G  P+ +TY
Sbjct: 651 GLV-LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTY 709

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           N LI G  K GR+   + ++ ++   G  P   TY  ++
Sbjct: 710 NCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILI 748



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 34/236 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  ++ +AE +  +  R G+  DV+TYN LI  Y    +      +   M++
Sbjct: 571 NILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKK 630

Query: 71  AGISP----------------------------------DVVTYNSLIAGATRNSLLSCS 96
           +GI P                                  D V YN+LI     +  +  +
Sbjct: 631 SGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKA 690

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L   M   GI PD  +YN L+   F+ G+  +   +  DM    L P T T++I++ G
Sbjct: 691 CSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVG 750

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
            CK +  D A   +R + ++GF P +   + LI GL + GR   A  I  E+   G
Sbjct: 751 HCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 215/467 (46%), Gaps = 44/467 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C A  L    A +   I+ G+    VT+  L+   C +  + DA   +L RM E G +PD
Sbjct: 155 CDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPD 214

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V +Y +L+ G         + +L+  M E G   PP+V SY +++H  F+ G   +A  +
Sbjct: 215 VFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTL 274

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F  M+   + P   T N +++GLCK +  D A  + + +     +P   TYN LI G   
Sbjct: 275 FCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 334

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           +G+   A  ILKE+   G  PN +TY+ ++ C  ++  +    EI ++M + G   +   
Sbjct: 335 SGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAST 394

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++  +   G L +  +  + MV +G++     +N  I  YCK G+L+ A L  ++M+
Sbjct: 395 YGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQ 454

Query: 315 KQGFECDKYTHTILIDGLCKAGNI------------------------------------ 338
           +QGF  D   +T +IDGLCK G +                                    
Sbjct: 455 QQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWE 514

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           K   L  E M++ G   N+  +N ++D+L K+GK+  A  +F+ M       +  +Y++M
Sbjct: 515 KAEELFYEMMDR-GIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTM 573

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           +H    A  +    KLL   L  G++        ++DG+   G + +
Sbjct: 574 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPD 620



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 174/367 (47%), Gaps = 16/367 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++KAEA++   I   ++P+  TYN LI  Y     +     IL  M   G  P+
Sbjct: 297 LCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 356

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY+ LI    ++ L + + ++ + M++ G  P+  +Y SL+H     G   + N V  
Sbjct: 357 VVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKD 416

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   + P    FNI +   CK    D A   F  +Q+ GF+P++V Y  +I GLCK G
Sbjct: 417 LMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIG 476

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A     ++ D G +P+ IT+ T++     + K++   E+   M  +G   +   + 
Sbjct: 477 RLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFN 536

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I    K G++ EA    + M   G + ++VSYNT+I+ Y   G++     LLD+M   
Sbjct: 537 SMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 596

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +    T   L+DG                M  +G   ++     ++D   +DG+I+  
Sbjct: 597 GLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDI 640

Query: 377 INVFESM 383
           + +F  M
Sbjct: 641 LTLFREM 647



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 98/188 (52%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + NI +  +CK  RL++A        + G +PD+V Y  +ID  C+    D   +   +M
Sbjct: 429 VFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQM 488

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+SPD++T+N+LI G   +     + +L  EM++ GIPP+V ++NS++  LF+ GK 
Sbjct: 489 IDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKV 548

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA ++F  M      P   ++N M++G          +++   +   G  P  VT+N L
Sbjct: 549 TEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTL 608

Query: 189 IKGLCKAG 196
           + G+   G
Sbjct: 609 LDGMVSMG 616



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 154/391 (39%), Gaps = 54/391 (13%)

Query: 96  SLDLLDEMLEMGIP---------------------------------------------P 110
           +LDL DE+L+   P                                             P
Sbjct: 83  ALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAP 142

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM- 169
           D+ ++  L+ C    G  +        +I   L     TF  +L  LC  + T +A+ + 
Sbjct: 143 DIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIV 202

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIMKCC 227
            R + + G  P++ +Y  L+KGLC   +   A  ++  + + G    PN ++YTT++   
Sbjct: 203 LRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGF 262

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
           F+         +   M   G   +     +VI    K+  + +A   ++QM+ + +  + 
Sbjct: 263 FKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 322

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            +YN+LI+ Y   G+   A  +L EM + G   +  T+++LID LCK+G    AR     
Sbjct: 323 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNS 382

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL-----CKAK 402
           M + G   N   Y  ++     +G +    NV + M V++       V N+     CK  
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM-VQNGMRPGRHVFNIEIYAYCKCG 441

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           RL  AS       + G      A   V+DGL
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 200/417 (47%), Gaps = 23/417 (5%)

Query: 11  NICVCTFCKAN----RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           NI +  FC+      ++ +A       + LG   D V+Y  LI   C+     A   +L 
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           R+    +  + V YN++I G  ++  ++ + DL  EM+  GI P+V +Y++L+   F +G
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +A  +F  +I  ++ P   TFNI+++G CK+R       +F  + K G +P++VTYN
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 304

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ G C    + TA+ I   +   G  P+  +Y  ++    + +K    + + + M  K
Sbjct: 305 SLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK 364

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               +   Y ++I    K GR+  A   ++QM   GV  +I++YN++I+   K  +++ A
Sbjct: 365 NIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKA 424

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L+ + + QG +   YT+TILIDGLCK                 G+D  +  YN ++  
Sbjct: 425 IALITKFKDQGIQPSMYTYTILIDGLCKVE---------------GYDITVNTYNVMIHG 469

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             K G  D A+++   M+    + ++ TY   + +L        A KL    +  G+
Sbjct: 470 FCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 17/360 (4%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+  + N  +   CK   +  A  +  + +  G+ P+VVTY+ LI  +           
Sbjct: 192 QLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAID 251

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + N++    I PD  T+N L+ G  ++  +     +   M++ GI PDV +YNSLM    
Sbjct: 252 LFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC 311

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + + + A  +F  M  G + P   ++NI++NG CK +  D A+ +F  +     +P +V
Sbjct: 312 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 371

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI GL K+GR+  A  ++ ++ D G  PN +TY +I+   F+  +    + +++  
Sbjct: 372 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 431

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K +G     + Y  +I    K+               +G  + + +YN +I+ +CK+G  
Sbjct: 432 KDQGIQPSMYTYTILIDGLCKV---------------EGYDITVNTYNVMIHGFCKKGLF 476

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNC 362
           + A  LL +M+      +  T+ I I  L     N K  +L  E + + G  +   +Y C
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITR-GLLNRSASYPC 535



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 207/444 (46%), Gaps = 25/444 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           TF   N ++ A ++    +R    P    +N ++ +  +   +    ++  +M   GI P
Sbjct: 60  TFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKP 119

Query: 76  DVVTYNSLIAGATRNSLLSCSLD----LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           ++   N LI    +  L+ C +       D+++ +G   D  SY +L+H L ++G+   A
Sbjct: 120 NLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 179

Query: 132 NRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             + Q  + G L    A  +N ++ G+CK+++ ++A  ++  +   G  P +VTY+ LI 
Sbjct: 180 LDLLQ-RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 238

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G+L+ A  +  ++      P+  T+  ++    ++RK K G  + + M ++G   
Sbjct: 239 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 298

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +++  +  +  +  A      M   GV  DI SYN LIN +CK  K++ A  L 
Sbjct: 299 DVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 358

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM  +    +  T+  LIDGL K+G I  A   ++ M+  G   N+  YN I+D L K 
Sbjct: 359 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 418

Query: 371 GKIDHAINV---FESMEVKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            ++D AI +   F+   ++ S +TY+ ++  LCK +               G  I  +  
Sbjct: 419 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE---------------GYDITVNTY 463

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             ++ G    G   EA  + SK++
Sbjct: 464 NVMIHGFCKKGLFDEALSLLSKMK 487



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 158/363 (43%), Gaps = 43/363 (11%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SY+S           D+A  +F  ++  + TP    FN +L  L K+++    L + + +
Sbjct: 53  SYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKM 112

Query: 174 QKHGFVPELVTYNILIKG---------------------------------------LCK 194
           +  G  P L   NILI                                         LCK
Sbjct: 113 EFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCK 172

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G  R A  +L+ +       NA+ Y T++    +++      ++ S M  KG + +   
Sbjct: 173 VGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVT 232

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I+ F  +G+LK+A D   +++ + ++ D  ++N L++ +CK+ K++    +   M 
Sbjct: 233 YSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMM 292

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           KQG   D  T+  L+DG C    +  A+     M + G + ++ +YN +++   K  K+D
Sbjct: 293 KQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD 352

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+N+F  M  K    +  TY+S++  L K+ R+  A +L+      GV        +++
Sbjct: 353 KAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 412

Query: 431 DGL 433
           D L
Sbjct: 413 DAL 415


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 5/393 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLG 126
           +  AG  PD   +N  +        L  ++ +L  M   G PP + +SYN ++  +++ G
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  VF +M    + P   T+N M++G  K    +   R+   +  HG  P  +TYN
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +L+ GLC+AGR+     +L E+      P+  TY+ +     RN   K  L +     + 
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 334

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T   +    ++    K G++  A + ++ +V  G+    V YNTLIN YC+ G+LE A
Sbjct: 335 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 394

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +    +M+ +  + D  T+  LI+GLCKA  I  A+  L  M   G +  +E +N ++D 
Sbjct: 395 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 454

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            G+ G+++    V   M+      +  +Y S+V+  CK  ++P A  +L       V   
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                A++D     G   +A  +  K++   IS
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 547



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 39/485 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +A R   A  +  +     VLP+ +TYN +ID + +    +AG+ + ++M  
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 263

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL------------ 118
            G+ P+ +TYN L++G  R   +  +  LLDEM    + PD ++Y+ L            
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323

Query: 119 MHCLF-----------------------QLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           M  LF                       + GK   A  V Q ++   L P    +N ++N
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 383

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C+    + A   F  ++     P+ +TYN LI GLCKA R+  A+ +L E+ D+G  P
Sbjct: 384 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 443

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
              T+ T++    R  + +    +LS M+  G   +   Y +++ AF K G++ EA   +
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M    V  +   YN +I+ Y + G  + A++L+++M+  G      T+ +LI GLC  
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 563

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TY 391
             I  A   +  ++      +  +YN ++      G ID A+++ + M    +K +  TY
Sbjct: 564 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             ++  L  A RL     L    +++ V    +    +V+     G   +A+ ++ ++  
Sbjct: 624 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683

Query: 452 AKISH 456
            + +H
Sbjct: 684 KRNNH 688


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 203/419 (48%), Gaps = 4/419 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  + N+ +   CK  R+  AE +  + +   +LP ++TYN LID YC+  + +  + + 
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            RM+   I P ++T+N+L+ G  +  ++  + ++L EM ++G  PD ++++ L       
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            K + A  V++  +   +     T +I+LN LCK    + A  +       G VP  V Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I G C+ G L  AR  ++ +   G  P+ + Y  +++      + +   + ++ MK 
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG +     Y  +I  + +     +  D +++M  +G   ++VSY TLIN  CK  KL  
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A ++  +ME +G       + +LIDG C  G I+ A    + M K G + NL  YN ++D
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            L   GK+  A ++   +  K    D FTY+S++     A  +     L     +SG++
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 198/421 (47%), Gaps = 10/421 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P   +  +L+D   +   F     +   + E+   P    Y   I  A + S +   
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L+L + M    I P V+ YN L+  L +  + ++A ++F +M+   L P   T+N +++G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + + ++   ++     P L+T+N L+KGL KAG +  A  +LKE+ D G  P+
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           A T++ +      N K +  L +       G   + +    ++ A  K G++++A + + 
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + +  G+  + V YNT+I+ YC++G L  A + ++ MEKQG + D   +  LI   C+ G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            ++ A   +  M   G   ++E YN ++   G+  + D   ++ + ME    + +  +Y 
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           ++++ LCK  +L  A  +       GV         ++DG    G      KI+   R +
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG------KIEDAFRFS 552

Query: 453 K 453
           K
Sbjct: 553 K 553



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 170/357 (47%), Gaps = 6/357 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  +C+   L  A   I    + G+ PD + YN LI  +C+    +     +N+M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  G+SP V TYN LI G  R        D+L EM + G  P+V SY +L++CL +  K 
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  V +DM    ++P    +N++++G C     ++A R  + + K G    LVTYN L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GL   G+L  A  +L E+   G  P+  TY +++         +  + +   MKR G 
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAY 307
                 Y  +I+        KE  +  E++  +  ++ D++ YN +++ Y   G +E A+
Sbjct: 631 KPTLKTYHLLISLCT-----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            L  +M ++    DK T+  LI G  K G +   R  ++ MN    +   + YN IV
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 154/319 (48%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +R  GI P   +   L+    +      ++++   +LE    P  + Y   +    +L  
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +   +F  M    + P    +N++++GLCK +  ++A ++F  +     +P L+TYN 
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CKAG    +  + + +      P+ IT+ T++K  F+    +    +L  MK  G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +  D F +  +   +    + + A    E  V  GV+++  + + L+N  CKEGK+E A 
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L     +G   ++  +  +IDG C+ G++ GAR+ +E M K G   +  AYNC++ R 
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434

Query: 368 GKDGKIDHAINVFESMEVK 386
            + G++++A      M++K
Sbjct: 435 CELGEMENAEKEVNKMKLK 453



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 4/344 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    NI +  + +    +K   I+ +    G +P+VV+Y  LI+  C+         + 
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M + G+SP V  YN LI G      +  +     EML+ GI  ++ +YN+L+  L   
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA  +  ++    L P   T+N +++G          + ++  +++ G  P L TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++LI    K G   T R      G+    P+ + Y  ++ C   +   +    +   M  
Sbjct: 638 HLLISLCTKEGIELTERL----FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K    D   Y ++I   +K+G+L E    +++M    ++ +  +YN ++  +C+     +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           AY+   EM+++GF  D      L+ GL +    K A + +  MN
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 37/394 (9%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP--DVWSYNSL--MHCLFQLGKPDEAN 132
            V +   ++  +   L S S D   E      PP   V     L  +  L Q  + + A 
Sbjct: 16  TVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETAR 75

Query: 133 RVFQDMICGDLTPCTAT----------------------FNIMLNGLCKNRYTDNALRMF 170
            V   ++  D TP  +                        +++LN   +++    A  +F
Sbjct: 76  GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN---ESKMISEAADLF 132

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
             L+  G  P   +  +L+  L K  + R    +   + +S   P+   Y   ++   + 
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                GLE+ + MK        F Y  +I    K  R+ +A    ++M+   +   +++Y
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           NTLI+ YCK G  E ++ + + M+    E    T   L+ GL KAG ++ A   L+ M  
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPS 406
           +GF  +   ++ + D    + K + A+ V+E+     VK +++T S +++ LCK  ++  
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           A ++L   +  G+   +     ++DG     CR+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGY----CRK 402


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 4/323 (1%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD +TY  ++    +   +  +L  ++EM   GI PD + YN ++  L Q  K +EA  
Sbjct: 6   PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F+ M+   + P   T+N ++NGLCK    + A  +F+ +   G+VP  V+YN LI G C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K   L  A+ +  ++  S   PN +TYTT++    ++ K +   E+L  M +KG T +  
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I  F K+ R+ EA   +EQMVT G+   +V+YN L+N  C+  KLE A+ L   M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
            ++       T+  L+  LC    + GA RL+ E + K G   +   Y+ +   L + GK
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK-GCPPDAITYDTLAWGLTRAGK 304

Query: 373 IDHAINVFESMEV--KDSFTYSS 393
           +  A  + E M++  ++ F  SS
Sbjct: 305 VHEAQELMEKMKLTKRNPFGRSS 327



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 154/307 (50%), Gaps = 4/307 (1%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PPD  +Y  ++  L +  + D+A    ++M    + P    +N +L+GLC+    + A  
Sbjct: 6   PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +F  + K    P +VTYN LI GLCKA R+ TA  + KE+   G+ P  ++Y T++    
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           + +      ++   M R     +   Y T+I    K G+++ A + ++ MV  GV  ++ 
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y+ LI+ +CK  +++ A+ LL++M  QG      T+ IL++ LC+A  ++ A      M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
            +      +  YN ++  L    ++D A  ++  M  K    D+ TY ++   L +A ++
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305

Query: 405 PSASKLL 411
             A +L+
Sbjct: 306 HEAQELM 312



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 135/270 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   C+  ++E+A  +    ++  + P+VVTYN LI+  C+    +  Y +   M
Sbjct: 46  IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 105

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G  P  V+YN+LI G  +   L  + D+ D+M+     P+V +Y +L+  L + GK 
Sbjct: 106 AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV 165

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  V   M+   +TP  AT++ +++G CK R  D A ++   +   G  P +VTYNIL
Sbjct: 166 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNIL 225

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LC+A +L  A  + + +      P  +TY T+++    +++      + + M  KG 
Sbjct: 226 LNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 285

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
             D   Y T+     + G++ EA + ME+M
Sbjct: 286 PPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 137/251 (54%), Gaps = 7/251 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F K+  + +N  V T+       CKA R+E A  +  +    G +P  V+YN LID +C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +     A   + ++M  +   P+VVTY +LI G +++  +  + ++LD M++ G+ P+V 
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +Y+ L+    ++ + DEA+++ + M+   + P   T+NI+LN LC+    ++A ++FRG+
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            +    P +VTYN L++ LC   +L  A  +  E+   G  P+AITY T+     R  K 
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305

Query: 234 KLGLEILSAMK 244
               E++  MK
Sbjct: 306 HEAQELMEKMK 316



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 4/313 (1%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T+  ++  LCK +  D+AL     +   G  P+   YN ++ GLC+  ++  AR +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            +++      PN +TY T++    +  + +   E+   M  KGY      Y T+I  F K
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
              L  A D  ++MV      ++V+Y TLI+   K GK++AA  +LD M K+G   +  T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ++ LIDG CK   +  A   LE M   G    +  YN +++ L +  K++ A  +F  M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            +       TY++++  LC  K+L  A +L    +  G          +  GL  +G   
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 441 EAKKIQSKIRMAK 453
           EA+++  K+++ K
Sbjct: 307 EAQELMEKMKLTK 319



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 139/298 (46%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A A + +    G+ PD   YN ++   CQ    +    +  +M +  I+P+
Sbjct: 19  LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 78

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN+LI G  +   +  + +L  EM   G  P   SYN+L+    +      A  VF 
Sbjct: 79  VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 138

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  +  P   T+  +++GL K+     A  +  G+ K G  P + TY+ LI G CK  
Sbjct: 139 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 198

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  +L+++   G AP  +TY  ++    R  K +   ++   M ++        Y 
Sbjct: 199 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYN 258

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           T++ A     +L  A     +M+  G   D ++Y+TL     + GK+  A  L+++M+
Sbjct: 259 TLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 229/499 (45%), Gaps = 59/499 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I + +FC  NR+  A +++   ++LG  PD  T+  LI   C          + ++M 
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDVVTY +LI G  +    S ++ LL  M++    P+V++YN+++  L +  +  
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +M+   ++P   T+N +++ LC      +   +   +     +P++V++N ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCK G++  A  ++ ++   G  PN +TYT +M       +    +++   M  KG  
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDY-------------------MEQMVTDGVQLDIVSY 290
            +   Y T+I  + KI R+ +A  Y                    + MV  G   +++SY
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISY 398

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA--------- 341
           NTLIN YCK  +++ A  L  EM +Q    D  T++ LI GLC    ++ A         
Sbjct: 399 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 458

Query: 342 ----------RLHLEYMNK----------------IGFDSNLEAYNCIVDRLGKDGKIDH 375
                     R+ L+Y+ K                   D +++  N  +D + + G+++ 
Sbjct: 459 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 518

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A ++F ++  K    D +TYS M++ LC+   L  ASKL     ++G  +       +  
Sbjct: 519 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 578

Query: 432 G-LRHSGCRREAKKIQSKI 449
           G LR++   R  + +Q  +
Sbjct: 579 GFLRNNETSRAIQLLQEMV 597



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 211/460 (45%), Gaps = 62/460 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + + CK  ++ +A  +  + +  G+ PD+ TYN LI A C    +    T+LN M +
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
           + I PDVV++N+++    +   ++ + D++D+M++ G+ P+V +Y +LM  HCL  L + 
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL--LSEM 322

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNR-------YT------------DNALRM 169
           DEA +VF  M+C    P   ++N ++NG CK +       YT            D A+++
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  +   G +P +++YN LI G CK  R+  A ++  E+      P+ +TY+T++     
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH---- 438

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
                                   G C        + RL++A     +MV      ++V+
Sbjct: 439 ------------------------GLC-------HVERLQDAIALFHEMVACSQIPNLVT 467

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y  L++  CK   L  A  LL  +E    + D   + I IDG+C+AG ++ AR     ++
Sbjct: 468 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 527

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
             G   ++  Y+ +++ L + G +D A  +F  M+      +   Y+++     +     
Sbjct: 528 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 587

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            A +LL   +  G     S     V  L   G  +  K+I
Sbjct: 588 RAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 627



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 186/401 (46%), Gaps = 25/401 (6%)

Query: 36  LGVLPDVVT--YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           L +LP  ++  +N        F + D   +  NRM      P  V +N L+    +    
Sbjct: 18  LSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHH 77

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           S  L L  +M   GIPP++++ + L++    L +   A  V   ++     P TATF  +
Sbjct: 78  STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL 137

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G+C       AL +F  +   GF P++VTY  LI GLCK G    A  +L  +     
Sbjct: 138 IRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 197

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN   Y TI+    ++R+      + S M  KG + D F Y ++I A   +   K    
Sbjct: 198 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 257

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            + +MV   +  D+VS+NT+++  CKEGK+  A+ ++D+M ++G E +  T+T L+DG C
Sbjct: 258 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC 317

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN--------------- 378
               +  A    + M   G   N+ +YN +++   K  +ID AI+               
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMD 377

Query: 379 ----VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
               VF++M  K    +  +Y+++++  CK +R+  A  L 
Sbjct: 378 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 418



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 194/402 (48%), Gaps = 25/402 (6%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R+   P  V +N L+ +  +        ++ ++M   GI P++ T + LI      + +
Sbjct: 53  LRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRV 112

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  +L ++L++G  PD  ++ +L+  +   GK  EA  +F  MI     P   T+  +
Sbjct: 113 GFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTL 172

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +NGLCK   T  A+R+   + +    P +  YN +I  LCK  ++  A  +  E+   G 
Sbjct: 173 INGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI 232

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P+  TY +++       ++K    +L+ M       D   + TV+ A  K G++ EA D
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHD 292

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +++M+  GV+ ++V+Y  L++ +C   +++ A  + D M  +G   +  ++  LI+G C
Sbjct: 293 VVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 334 KAGNIKGA------------RLHLEYMNKIGFDS--------NLEAYNCIVDRLGKDGKI 373
           K   I  A             L+++   K+ FD+        N+ +YN +++   K  +I
Sbjct: 353 KIQRIDKAIHYTXLMDXXCCYLNMDEAVKV-FDTMVCKGCMPNVISYNTLINGYCKIQRI 411

Query: 374 DHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           D A+ +F  M     + D+ TYS+++H LC  +RL  A  L 
Sbjct: 412 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 219/475 (46%), Gaps = 44/475 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C A  L    A +   I+ G+  D V +  L+   C +  + DA   +L RM E G +PD
Sbjct: 24  CDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPD 83

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V +Y++L+ G         + +L+  M E G   PPDV SY++++H  F+ G   +A  +
Sbjct: 84  VFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTL 143

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F  M+   + P   T N +++GLCK +  D A  + + +     +P   TYN LI G   
Sbjct: 144 FCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 203

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           +G+   A  ILKE+   G  PN +TY  ++ C  ++  +    EI ++M + G   D   
Sbjct: 204 SGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATT 263

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++  +   G L E  +  + MV +G++ +  +++  I  YCK G+L+ A L   +M+
Sbjct: 264 YGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQ 323

Query: 315 KQGFECDKYTHTILIDGLCKAGNI------------------------------------ 338
           + GF  D  T+T +IDGLCK G +                                    
Sbjct: 324 QLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWE 383

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           K   L  E M++ G   ++  +  ++DRL K+GK+  A  +F+ M       +  +Y++M
Sbjct: 384 KAEELFYEMMDR-GIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTM 442

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +H    A  +    KLL   L  G++        ++DG+   G + +    ++ I
Sbjct: 443 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLI 497



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 174/367 (47%), Gaps = 16/367 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++KAEA++   I   ++P+  TYN LI  Y     +     IL  M   G  P+
Sbjct: 166 LCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 225

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN LI    ++   + + ++ + M++ G  PD  +Y SL+H     G   E N V  
Sbjct: 226 VVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKD 285

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   +     TF+I +   CK    D A   F  +Q+ GF+P++VTY  +I GLCK G
Sbjct: 286 LMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A     ++ D G +PN IT+TT++       K++   E+   M  +G   D   + 
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFT 405

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G++ EA    + M   G + ++VSYNT+I+ Y   G++     LLD+M   
Sbjct: 406 AMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 465

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +    T   L+DG                M  +G   +++    ++D   +DG+I+  
Sbjct: 466 GLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDI 509

Query: 377 INVFESM 383
           + +F  M
Sbjct: 510 LTLFREM 516



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 7/274 (2%)

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLE 238
           P++ T+ ILI   C AG L      L ++  +G   +A+ +T +++  C + R       
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINL 296
           +L  M   G T D F Y T++       + +EA + +  M  DG     D+VSY+T+I+ 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           + KEG +  AY L  +M   G   +  T   +IDGLCK   +  A   L+ M       N
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              YN ++      G+   A+ + + M    +  +  TY+ ++  LCK+     A ++  
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           S ++SG +   +   +++ G    G   E   ++
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVK 284



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 7/239 (2%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           AP+  T+  ++ CC       LG   L  + + G   D   +  ++       R  +A +
Sbjct: 10  APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMN 69

Query: 274 -YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 330
             + +M   G   D+ SY+TL+   C E K E A  L+  M + G  C  D  +++ +I 
Sbjct: 70  IVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIH 129

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVK 386
           G  K G++  A      M   G   N+   N ++D L K   +D A  V + M     + 
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 189

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +  TY+S++H    + +   A ++L    + G R        ++D L  SG   EA++I
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 194/410 (47%), Gaps = 9/410 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           + ST  +N  +     A R++ AE      +R  V PD+ T+N +I   C+         
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 64  ILNRMREAGISPDVVTYNSLIAGATR----NSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           +   ++  G++P V TYNSLI G  +     ++    + LL EM+E GI P   ++  L+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM-LLKEMVEAGISPTAVTFGVLI 271

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +      A RVF++M    +     T+N +++GLC     +  +++   ++  G  
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  +T+  ++KG CK G +  A   +  + +    P+ + YT ++    R  K +  + +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             AM +KG + +   Y  +I  F + G  + A+  +++M   G++ D+V+YN LI   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G++  A  LLDEM + G E +  T+  +I G C  GNIK A      M K    +N+  
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 405
           YN  +    + GK+D A ++   M     V +  TY ++   + +    P
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 173/379 (45%), Gaps = 42/379 (11%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P   + N+L+AG      +  +       L   + PD++++N+++  L ++G+  +A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 135 FQDMICGDLTPCTATFNIML--------------------------------------NG 156
            +D+    L P  AT+N ++                                      NG
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CKN  T  A+R+F  +++ G    +VTYN LI GLC  G++     +++E+ D G +PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++K   +        + +  M  +    D   Y  +I  + ++G++++A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G+  ++ +YN LI  + + G   +A  LLDEM+++G E D  T+ +LI  LC  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A   L+ M+++G + N   YN I+      G I  A  +   ME      +  TY+
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 393 SMVHNLCKAKRLPSASKLL 411
             +   C+  ++  A+ LL
Sbjct: 514 VFIKYFCQIGKMDEANDLL 532



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 7/347 (2%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   S N+L+  L    + D A + F+  +   ++P   TFN +++GLC+      A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 170 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            + ++  G  P + TYN LI G CK   AG +     +LKE+ ++G +P A+T+  ++  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +N      + +   MK++G       Y ++I+     G+++E    ME+M   G+  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            +++  ++  +CK+G +  A   +D M ++  E D   +TILIDG  + G ++ A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M K G   N+  YNC++    + G    A  + + M+ K    D  TY+ ++  LC   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +  A KLL    + G+         ++ G    G  + A +I++++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 7/250 (2%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H P+  +   ++      ++  L  +   +  R+  + D + + TVI+   +IG+L++A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 329
           D  + +   G+   + +YN+LI+ YCK+G     Y   +LL EM + G      T  +LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
           +G CK  N   A    E M + G  +++  YN ++  L  +GK++  + + E ME     
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +  T+  ++   CK   +  A+  +    +  V         ++DG R  G   +A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 446 QSKIRMAKIS 455
           +  +    IS
Sbjct: 392 KEAMAKKGIS 401


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 199/414 (48%), Gaps = 3/414 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-R 69
           N  +  +C  NR+E A  +I      G  PD V+Y  ++   C+    +    ++ +M +
Sbjct: 305 NSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQ 364

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++ + PD VTYN+LI   +++     +L  L E  + G   D   Y++++H   Q G+ D
Sbjct: 365 DSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMD 424

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +  DM      P   T+  +++G C+    D A +M + + KHG  P  V+Y  L+
Sbjct: 425 EAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALL 484

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC +G+   AR ++    +    PNAITY  +M    R  K     ++   M  KG+ 
Sbjct: 485 NGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFF 544

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                   +I +  +  ++ EA  Y+E+ +  G  +++V++ T+I+ +C+ G +EAA  +
Sbjct: 545 PTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSV 604

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L++M       D  T+T L D L K G +  A   +  M   G D     +  ++ R  +
Sbjct: 605 LEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQ 664

Query: 370 DGKIDHAINVFESMEVKDSF--TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            G++D  +N+ + M  +  F   Y+ ++  LC    L  A KLL   L++  ++
Sbjct: 665 WGRVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKL 718



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 215/486 (44%), Gaps = 42/486 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS       + ++ +A +L  A  ++    + GV P++   N  I    +    +    
Sbjct: 228 ELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALR 287

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L RM+  GI PD+VTYNSLI G    + +  +L+L+  +   G PPD  SY ++M  L 
Sbjct: 288 FLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLC 347

Query: 124 QLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV--- 179
           +  K ++   + + M+   +L P   T+N +++ L K+ + D+AL   +  +  GF    
Sbjct: 348 KEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDK 407

Query: 180 --------------------------------PELVTYNILIKGLCKAGRLRTARWILKE 207
                                           P++VTY  ++ G C+ GR+  A+ +L++
Sbjct: 408 VGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQ 467

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +   G  PN ++YT ++     + K     E+++  +   +T +   Y  V+  F + G+
Sbjct: 468 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGK 527

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           L EA D   +MV  G     V  N LI   C+  K+  A   L+E   +G   +    T 
Sbjct: 528 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 587

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           +I G C+ G+++ A   LE M       +   Y  + D LGK G++D A  +   M  K 
Sbjct: 588 VIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 647

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
                 T+ S++H  C+  R+     LL   +K   +  ++    V++ L   G   EA+
Sbjct: 648 LDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAE 705

Query: 444 KIQSKI 449
           K+  K+
Sbjct: 706 KLLGKV 711



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 181/384 (47%), Gaps = 5/384 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + Y  L+D   +         +L  M   GI      +  ++   +R   L  +L +L  
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M + G+ P++   N+ ++ L +  K ++A R  + M    + P   T+N ++ G C    
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYT 221
            ++AL +  GL   G  P+ V+Y  ++  LCK  ++   + +++++  DS   P+ +TY 
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    ++      L  L   + KG+  D  GY  ++ +F + GR+ EA   +  M + 
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
               D+V+Y  +++ +C+ G+++ A  +L +M K G + +  ++T L++GLC +G    A
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHN 397
           R  +    +  +  N   Y  ++    ++GK+  A ++   M  K  F        ++ +
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 398 LCKAKRLPSASKLLLSCLKSGVRI 421
           LC+ +++  A K L  CL  G  I
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAI 580



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 184/406 (45%), Gaps = 15/406 (3%)

Query: 17  FCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK  ++E+ + ++   ++   ++PD VTYN LI    +    D     L    + G   
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D V Y++++    +   +  +  L+ +M      PDV +Y +++    +LG+ DEA ++ 
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKML 465

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q M      P T ++  +LNGLC +  +  A  M    ++H + P  +TY +++ G  + 
Sbjct: 466 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRRE 525

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A  + +E+ + G  P  +    +++   +N+K     + L     KG   +   +
Sbjct: 526 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 585

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            TVI  F +IG ++ A   +E M       D V+Y  L +   K+G+L+ A  L+ +M  
Sbjct: 586 TTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 645

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G +    T   +I   C+ G +      L+ M K      +  YN ++++L   G ++ 
Sbjct: 646 KGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTI--YNHVIEKLCDFGNLEE 703

Query: 376 AINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           A    E +  K   T S +  N C          L+ SCLK GV +
Sbjct: 704 A----EKLLGKVLRTASKLDANTCHV--------LMESCLKKGVAL 737



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 140/301 (46%), Gaps = 5/301 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +  +L+ L K +    A R+ R + + G       +  ++    +AG+LR A  +L  + 
Sbjct: 199 YYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQ 258

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            +G  PN     T +    +  K +  L  L  M+  G   D   Y ++I  +  + R++
Sbjct: 259 KAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIE 318

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTIL 328
           +A + +  + + G   D VSY T++   CKE K+E    L+++M +      D+ T+  L
Sbjct: 319 DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTL 378

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESME 384
           I  L K G+   A   L+     GF  +   Y+ IV    + G++D A    I+++    
Sbjct: 379 IHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSC 438

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
             D  TY+++V   C+  R+  A K+L    K G +    +  A+++GL HSG   EA++
Sbjct: 439 NPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEARE 498

Query: 445 I 445
           +
Sbjct: 499 M 499



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 44/279 (15%)

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
            H P  + Y T++    + +  +    +L  M R+G       +  V+ ++ + G+L+ A
Sbjct: 193 SHHP--LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNA 250

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +  M   GV+ ++   NT I +  K  KLE A   L+ M+  G + D  T+  LI G
Sbjct: 251 LRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKG 310

Query: 332 LCKAGNIKGARLHL--------------EYMNKIGF-------------------DSNL- 357
            C    I+ A L L               Y   +GF                   DSNL 
Sbjct: 311 YCDLNRIEDA-LELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI 369

Query: 358 ---EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
                YN ++  L K G  D A+   +  E K    D   YS++VH+ C+  R+  A  L
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++               A+VDG    G   EAKK+  ++
Sbjct: 430 VIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQM 468



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 37/275 (13%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ + + C+  ++ +A+  + + +  G   +VV +  +I  +CQ    +A  ++L  M 
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +   PD VTY +L     +   L  + +L+ +ML  G+ P   ++ S++H   Q G+ D
Sbjct: 610 LSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVD 669

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
                  DM+             +L+ + K +                  P    YN +I
Sbjct: 670 -------DMLN------------LLDRMVKRK------------------PFRTIYNHVI 692

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           + LC  G L  A  +L ++  +    +A T   +M+ C +        ++   M R+  T
Sbjct: 693 EKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLT 752

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            D      V    V  G L EA   M + V  G+Q
Sbjct: 753 PDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQ 787


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 206/411 (50%), Gaps = 10/411 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI + +F +  R + A        R    PD+ T+ +L+D  C+    +  + + + M 
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM 216

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + PD   + +++    +   +  + ++  +M + G PPD  +YN+++  L + G  
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA +V  +M+     P   T+ I++N LCK    + A  +FR +   GF P  V Y  L
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K+GR++ A  +  E+ ++G+ P+ IT+T ++    ++  ++   +    M R G 
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC 396

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y T+I    KIGR+  A   M+ M+  G   D V+Y  L++ +CK G+L+ A  
Sbjct: 397 KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQ 456

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC--IVDR 366
           LLDE++K     +   ++ L+ GLC  G+++     L   +K   + NL+   C  I+  
Sbjct: 457 LLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAE-NLDPGLCCSIIVG 515

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK--RLPSASKLL 411
           L K G++D A  +F+ M  +    D+ TY+ +++ LC+++  R+  A  LL
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALL 566



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 204/478 (42%), Gaps = 43/478 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I V + CKA  LE+AE +       G  P+ V Y  LI  + +        ++ + M E
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG  PDV+T+  +I G  ++     +    +EM+  G  P+V +Y +++  L ++G+   
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+ + MI     P + T+  +L+G CK    D A ++   L K    P L  Y+ L+K
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478

Query: 191 GLC------------------------------------KAGRLRTARWILKELGDSGHA 214
           GLC                                    K GRL  A  I + +   G  
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 215 PNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           P+A TY  ++   C  R  + +    +L  ++  GY  D   Y  +     KIG +  A 
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             +E+  + G   D+V+Y  L    C +G+++ A  L  EM +QG   D   +  +I+GL
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-- 390
            K   ++ A    + M   G    +  Y  +V  L   G +D A + FE M  +      
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGS 718

Query: 391 ---YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              Y +++H  CKA ++ +A KL    +  G         ++ DGL  SG   +A+++
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL 776



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 202/425 (47%), Gaps = 10/425 (2%)

Query: 28  AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
           AI  + ++ G+ P+  ++N+LI ++ +    D   T    M+     PD+ T+  L+   
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 88  TRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
            +  +   + ++  EM+ MG +PPD   + +++  L +  +  EA  VF  M      P 
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
              +N M++GL K  +   AL++   +     VP  VTY IL+  LCKAG L  A  + +
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +  SG  PN++ YT+++    ++ + K    +   M   GY  D   +  +I    K G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
             ++A    E+M+  G + ++V+Y T+I    K G++  A+ ++  M   G   D  T+ 
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFE---- 381
            L+DG CK G +  A   L+ ++K     NL+ Y+ +V  L   G +++ + ++FE    
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKA 499

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           + E  D     S++  LCK  RL  A ++    +  G +   +    +++GL    CR  
Sbjct: 500 AAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL----CRSR 555

Query: 442 AKKIQ 446
             +++
Sbjct: 556 ENRVE 560



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 40/347 (11%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G   DV++YN LM+ L       +   + ++M+   + P T +FNI++    + R  D
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAG---------------------------- 196
           +A+  F  +++    P+L T+ IL+  LCKAG                            
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 197 --------RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
                   R++ AR +  ++   G  P+AI Y T++    +    +  L++L  M  K  
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  ++ +  K G L+ A +    M   G + + V Y +LI+ + K G+++ A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L DEM + G+  D  THT++IDGLCK+GN + A    E M + G   N+  Y  I+  L 
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 369 KDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
           K G++ +A  + + M       DS TY  ++   CK  RL  A++LL
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 173/390 (44%), Gaps = 39/390 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R+  A  I+   I  G  PD VTY  L+D +C+    D    +L+ + +   SP++ 
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-DVWSYNSLMHCLFQLGKPDEANRVFQD 137
            Y+SL+ G      +  +LD L E  +      D     S++  L + G+ DEA R+FQ 
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQR 531

Query: 138 MICGDLTPCTATFNIMLNGLCKNR--YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           M+     P   T+NI++NGLC++R    + A  +   L+  G++P+ VTY  L  GLCK 
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A  +L+E    G   + + YT +        +    + +   M R+G   D   Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY------------------------- 290
           C +I   +K  +L++A  + ++M+  G +  + +Y                         
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA 711

Query: 291 -----------NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                      + LI+ +CK  K++AA  L ++M  +G      T   L DGL ++G  +
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            A+  L+ M   G   +   +  I+D L K
Sbjct: 772 KAQELLQEMAAGGSPPHAATFTAILDGLRK 801



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 3/240 (1%)

Query: 11  NICVCTFCKA--NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           NI +   C++  NR+E+A A++ D   +G LPD VTY  L    C+    D    +L   
Sbjct: 545 NILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEA 604

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G + DVV Y +L  G      +  ++ L  EM+  G  PD  +Y  +++ L +  K 
Sbjct: 605 SSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKL 664

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNI 187
           ++A + F +MI     P  AT+  ++  LC     D A   F G+   G  V  ++ Y+ 
Sbjct: 665 EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDA 724

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CKA ++  A  + +++   G+ P A+T  ++     R+ K +   E+L  M   G
Sbjct: 725 LIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGG 784



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 2/226 (0%)

Query: 1   MFGKLSTRLLNICVCT-FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           M G L   +    +C   CK   +++A  ++ +    G   DVV Y  L    C     D
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
              ++   M   G +PD   Y  +I G  +   L  +    DEM+  G  P V +Y +L+
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 120 HCLFQLGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
             L   G  DEA   F+ M+  G+L      ++ +++G CK    D AL++F  +   G 
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           VP  VT   L  GL ++G+   A+ +L+E+   G  P+A T+T I+
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 45/260 (17%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A ++ G+  D F Y  ++   V      +     E+M+  G+  +  S+N LI  + +  
Sbjct: 109 AGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTR 168

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG------------------------- 336
           + + A    + M+++  + D +T  IL+D LCKAG                         
Sbjct: 169 RADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228

Query: 337 -----------NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
                       +K AR     M K GF  +  AYN ++D L K G    A+ V ++M  
Sbjct: 229 TAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLA 288

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           K       TY  +V++LCKA  L  A +L      SG R       +++ G   SG  +E
Sbjct: 289 KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKE 348

Query: 442 A-----KKIQSKIRMAKISH 456
           A     + +++  R   I+H
Sbjct: 349 ACSLFDEMVEAGYRPDVITH 368



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 4/158 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-ISPDV 77
           K  +LE A     + I  G  P V TY  L+ A C   + D  +     M   G +   V
Sbjct: 660 KGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSV 719

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           + Y++LI G  +   +  +L L ++M+  G  P   +  SL   L + GK ++A  + Q+
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           M  G   P  ATF  +L+GL   R +D + ++ + +Q+
Sbjct: 780 MAAGGSPPHAATFTAILDGL---RKSDESGKLLKLVQE 814


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 215/447 (48%), Gaps = 4/447 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L    +  FCK  ++E+A  +       GV+P+VVTYN +ID       +D  +    +M
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G+ P ++TY+ L+ G T+   +  +  +L EM E G PP+V  YN+L+  L + G  
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSL 373

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +   M+   L+  ++T+N ++ G CK+   D A R+ + +   GF     ++  +
Sbjct: 374 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSV 433

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  LC      +A   + E+     +P     TT++    ++ K+   +E+      KG+
Sbjct: 434 ICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF 493

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D      ++    + G+L+E     ++++  G  +D VSYNTLI+  C   KL+ A++
Sbjct: 494 LVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFM 553

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
            +DEM K+G + D YT++ILI GL     ++ A        + G   ++  Y+ ++D   
Sbjct: 554 FMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCC 613

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K  + +    +F+ M       ++  Y+ ++   C++ RL  A +L       G+    +
Sbjct: 614 KAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRM 451
              +++ G+       EAK +  ++RM
Sbjct: 674 TYTSLIKGMSIISRVEEAKLLLEEMRM 700



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 203/448 (45%), Gaps = 39/448 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V    KA R+  A  ++ +    G  P+V+ YN LID+  +  S +    I + M  
Sbjct: 326 SILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVS 385

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+S    TYN+LI G  ++     +  LL EML +G   +  S+ S++  L      D 
Sbjct: 386 KGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDS 445

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R   +M+  +++P       +++GLCK+     A+ ++      GF+ +  T N L+ 
Sbjct: 446 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLH 505

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+AG+L     I KE+   G   + ++Y T++  C  N+K       +  M +KG   
Sbjct: 506 GLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKP 565

Query: 251 DGFGYCTVIAAFVKIGRLKEATDY-----------------------------------M 275
           D + Y  +I   + + +++EA  +                                    
Sbjct: 566 DNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLF 625

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M+++ +Q + V YN LI  YC+ G+L  A  L ++M+ +G   +  T+T LI G+   
Sbjct: 626 DEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 685

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
             ++ A+L LE M   G + N+  Y  ++D  GK G++     +   M  K    +  TY
Sbjct: 686 SRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 745

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + M+    +   +  AS+LL    + G+
Sbjct: 746 TVMIGGYARDGNVTEASRLLHEMREKGI 773



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 164/330 (49%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           LL   +   CK  +  KA  + +  +  G L D  T N L+   C+    + G+ I   +
Sbjct: 464 LLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEI 523

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              G   D V+YN+LI+G   N  L  +   +DEM++ G+ PD ++Y+ L+  L  + K 
Sbjct: 524 LGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKV 583

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA + + D     + P   T+++M++G CK   T+   ++F  +  +   P  V YN L
Sbjct: 584 EEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHL 643

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I   C++GRL  A  + +++   G +PN+ TYT+++K      + +    +L  M+ +G 
Sbjct: 644 IGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGL 703

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             + F Y  +I  + K+G++ +    + +M +  V  + ++Y  +I  Y ++G +  A  
Sbjct: 704 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 763

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           LL EM ++G   D  T+   I G  K G +
Sbjct: 764 LLHEMREKGIVPDSITYKEFIYGYLKQGGV 793



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 182/400 (45%), Gaps = 4/400 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++   N  +  +CK+ + + AE ++ + + +G   +  ++  +I   C    FD+    
Sbjct: 390 LTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRF 449

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M    +SP      +LI+G  ++   S +++L  + L  G   D  + N+L+H L +
Sbjct: 450 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCE 509

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK +E  R+ ++++         ++N +++G C N+  D A      + K G  P+  T
Sbjct: 510 AGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYT 569

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ILI+GL    ++  A     +   +G  P+  TY+ ++  C +  + + G ++   M 
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMM 629

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                 +   Y  +I A+ + GRL  A +  E M   G+  +  +Y +LI       ++E
Sbjct: 630 SNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 689

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A LLL+EM  +G E + + +T LIDG  K G +      L  M+      N   Y  ++
Sbjct: 690 EAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 749

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
               +DG +  A  +   M     V DS TY   ++   K
Sbjct: 750 GGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLK 789



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 35/302 (11%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           + T+  N  +   C+A +LE+   I  + +  G + D V+YN LI   C     D  +  
Sbjct: 495 VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           ++ M + G+ PD  TY+ LI G    + +  ++    +    G+ PDV++Y+ ++    +
Sbjct: 555 MDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +E  ++F +M+  +L P T  +N ++   C++     AL +   ++  G  P   T
Sbjct: 615 AERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSAT 674

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSG-------------------------------H 213
           Y  LIKG+    R+  A+ +L+E+   G                               H
Sbjct: 675 YTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 734

Query: 214 A----PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           +    PN ITYT ++    R+        +L  M+ KG   D   Y   I  ++K G + 
Sbjct: 735 SKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVL 794

Query: 270 EA 271
           +A
Sbjct: 795 QA 796



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 74/195 (37%), Gaps = 41/195 (21%)

Query: 293 LINLYCKEGKLEAAYLLLD----------------------------EMEK--------- 315
           LI +YC + K +  YL LD                            E +K         
Sbjct: 186 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC 245

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   D Y  T  I+  CK G ++ A      M + G   N+  YN ++D LG  G+ D 
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A    E M  +       TYS +V  L KAKR+  A  +L    + G          ++D
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 432 GLRHSGCRREAKKIQ 446
            L  +G   +A +I+
Sbjct: 366 SLIEAGSLNKAIEIK 380


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 203/414 (49%), Gaps = 10/414 (2%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
           A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++IA
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 86  GATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GDL 143
           G      +  +LD++ EM E G I P+ ++Y +++    ++G+ DEA +VF +M+  G++
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            P    +N ++ G C     D AL     + + G    + TYN+L+  L   GR   A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +++E+G  G A +  TY  ++    +    K  LEI   M R+G       Y ++I A  
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           K G+++E     ++ V  G++ D+V YN LIN +   G ++ A+ ++ EMEK+    D  
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+  L+ GLC  G +  AR  ++ M K G   +L  YN ++      G +  A+ +   M
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             K       TY++++  LCK  +   A  ++   +++G+    S   ++++GL
Sbjct: 494 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 173/359 (48%), Gaps = 2/359 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  FC   R++ A  I+ +   R G+ P+  TY  +I  +C+    D    + + M 
Sbjct: 189 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 248

Query: 70  EAG-ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             G + P+ V YN+LI G      L  +L   D M+E G+   V +YN L+H LF  G+ 
Sbjct: 249 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 308

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA  + ++M    L     T+NI++NG CK      AL +F  + + G    +VTY  L
Sbjct: 309 TEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 368

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K G+++    +  E    G  P+ + Y  ++     +       EI+  M++K  
Sbjct: 369 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 428

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T++     +GR+ EA   +++M   G+Q D+V+YNTLI+ Y  +G ++ A  
Sbjct: 429 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 488

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           + +EM  +GF     T+  LI GLCK G    A   ++ M + G   +   Y  +++ L
Sbjct: 489 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 178/397 (44%), Gaps = 49/397 (12%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + SL L   M  + +P    S + L+  L        A  +F DM    L  CT TFNIM
Sbjct: 105 ATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIM 160

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  LC       AL + R + +    P  VTYN +I G C  GR++ A  I++E+ + G 
Sbjct: 161 LRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 216

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEA 271
            APN  TY T++    +  +    +++   M  KG    +   Y  +I  +   G+L  A
Sbjct: 217 IAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 276

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             Y ++MV  GV + + +YN L++    +G+   AY L++EM  +G   D +T+ ILI+G
Sbjct: 277 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILING 336

Query: 332 LCKAGNIKGARLHLEYMNKIG---------------------------FD--------SN 356
            CK GN+K A    E M++ G                           FD         +
Sbjct: 337 HCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPD 396

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           L  YN +++     G ID A  +   ME K    D  TY++++  LC   R+  A KL+ 
Sbjct: 397 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 456

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              K G++        ++ G    G  ++A +I++++
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 164/330 (49%), Gaps = 16/330 (4%)

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R++  M    L   TA+ + +L+ L     +  A  +F  + +        T+NI+++ L
Sbjct: 109 RLYSRMKSLSLPISTASLHPLLSALP----SAPAFALFADMFRLRLPLCTTTFNIMLRHL 164

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK-RKGYTF 250
           C AG+   A  +L+++      PNA+TY T++   C R R  +  L+I+  M+ R G   
Sbjct: 165 CSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGR-VQAALDIMREMRERGGIAP 219

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLL 309
           + + Y TVI+ + K+GR+ EA    ++M+T G V+ + V YN LI  YC +GKL+ A L 
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D M ++G      T+ +L+  L   G    A   +E M   G   ++  YN +++   K
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCK 339

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G +  A+ +FE+M  +       TY+S+++ L K  ++    KL    ++ G+R     
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             A+++    SG    A +I  ++   +I+
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIA 429



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 83/150 (55%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  + +   +  +++A  I+ +  +  + PD VTYN L+   C     D    +++ M
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 458

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + GI PD+VTYN+LI+G +    +  +L + +EM+  G  P + +YN+L+  L + G+ 
Sbjct: 459 TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 518

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           D+A  + ++M+   +TP  +T+  ++ GL 
Sbjct: 519 DDAENMVKEMVENGITPDDSTYISLIEGLT 548


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 204/422 (48%), Gaps = 12/422 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD+  +N L+ A  +  +      +   MR+A + PDVVTY  L+ G  ++  +  +L +
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 100 LDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL---TPCTATFNIML 154
           LD M   G  + PD+   N+++  L ++G+  +A  +F D     +    P   T+N + 
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNCLA 247

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +  C+      A ++   ++K G  P ++T N +I GLC+ GR+  A    +E       
Sbjct: 248 DAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE 307

Query: 215 P--NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              NA+TY+T+           + +E+   M   G+  D   Y T+I+   + GRL +A 
Sbjct: 308 ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDAC 367

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                M   G +LD  +YN LI  +C++ KL  AY LL+EM+  G + D YT+  L+ GL
Sbjct: 368 TTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGL 427

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
           CKAG+       L +M   G   ++  +  +V    K GK D A+ +F SM+      ++
Sbjct: 428 CKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNT 487

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             Y++++  LCK++ +  A KL     +  V    +   A++ GL+      +A ++  +
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDR 547

Query: 449 IR 450
           +R
Sbjct: 548 MR 549



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 8/330 (2%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIR--LGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +LN  V   CK  RL++A   + + +R   G  P+ VTYN L DA+C+         I+ 
Sbjct: 205 ILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVA 264

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW----SYNSLMHCL 122
           RM + G++P+V+T N++I G  R   +  +L+   E  +  + P+      +Y++L    
Sbjct: 265 RMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAF 322

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
                 D A  +F +M      P    +  M++GL +     +A      ++K GF  + 
Sbjct: 323 LHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDA 382

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             YNILI G C+  +L  A  +L+E+   G  P+  TY T++    +   +    E+L  
Sbjct: 383 KAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGH 442

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M   G       + T++  + K G+  EA      M    +Q + V YNTLI+  CK  +
Sbjct: 443 MIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSRE 502

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           ++ A  L DEM ++    +  T+  L+ GL
Sbjct: 503 VDVAIKLFDEMREKNVPANVTTYNALLKGL 532



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 11/367 (2%)

Query: 99  LLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L + L  G P PD+  +NSL+  L + G       +F  M    + P   T+ I+LNGL
Sbjct: 117 FLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGL 176

Query: 158 CKNRYTDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-- 213
           CK+ +  +AL++   +   G    P++   N ++ GLCK GRL+ A   + E     H  
Sbjct: 177 CKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGC 236

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           APNA+TY  +     R     +  +I++ M+++G   +     T+I    ++GR+  A +
Sbjct: 237 APNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALE 296

Query: 274 YMEQ--MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
           +  +   V    + + V+Y+TL + +     ++ A  L  EM   G   D   +  +I G
Sbjct: 297 FFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISG 356

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           L +AG +  A      M K GF  + +AYN ++    +  K+  A  + E M+      D
Sbjct: 357 LTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPD 416

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
            +TY++++  LCKA    +  +LL   +  G +        +V G   +G   EA +I  
Sbjct: 417 VYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476

Query: 448 KIRMAKI 454
            +  A+I
Sbjct: 477 SMDEARI 483



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 106/212 (50%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +    +A RL  A        + G   D   YN+LI  +C+       Y +L  M+  G+
Sbjct: 354 ISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGL 413

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDV TYN+L++G  +    S   +LL  M++ G  P V ++ +L+H   + GK DEA R
Sbjct: 414 QPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALR 473

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F+ M    + P T  +N +++ LCK+R  D A+++F  +++      + TYN L+KGL 
Sbjct: 474 IFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQ 533

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
                  A  ++  + +    PN +T   +M+
Sbjct: 534 DKKMAEKAFELMDRMREERCTPNYVTVDVLME 565



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 117/262 (44%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            F   N ++ A  +  +    G  PD V Y  +I    Q        T    M++AG   
Sbjct: 321 AFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKL 380

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D   YN LI G  R   L  + +LL+EM  +G+ PDV++YN+L+  L + G     + + 
Sbjct: 381 DAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELL 440

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             MI     P   TF  +++G CK   TD ALR+FR + +    P  V YN LI  LCK+
Sbjct: 441 GHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKS 500

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             +  A  +  E+ +     N  TY  ++K     +  +   E++  M+ +  T +    
Sbjct: 501 REVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTV 560

Query: 256 CTVIAAFVKIGRLKEATDYMEQ 277
             ++    +IG  +    +M+Q
Sbjct: 561 DVLMEWLPEIGETERLKCFMQQ 582



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 100/204 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL  +  NI +  FC+  +L +A  ++ +   +G+ PDV TYN L+   C+   F A   
Sbjct: 379 KLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDE 438

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M + G  P VVT+ +L+ G  +      +L +   M E  I P+   YN+L+  L 
Sbjct: 439 LLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLC 498

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D A ++F +M   ++     T+N +L GL   +  + A  +   +++    P  V
Sbjct: 499 KSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYV 558

Query: 184 TYNILIKGLCKAGRLRTARWILKE 207
           T ++L++ L + G     +  +++
Sbjct: 559 TVDVLMEWLPEIGETERLKCFMQQ 582


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 193/391 (49%), Gaps = 4/391 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +   CK  +++ AE +  + +   +LP ++TYN LID YC+  + +  + +  RM
Sbjct: 589 IYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERM 648

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +   I P ++T+N+L+ G  +  ++  + ++L EM + G  PD ++++ L        K 
Sbjct: 649 KADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKA 708

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D A  V++  +   L     T +I+LN LCK    + A  +       G VP  V YN +
Sbjct: 709 DAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTM 768

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  + G L  AR  +  +   G  P+ + Y  +++        +   + ++ MK KG 
Sbjct: 769 IDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           +     Y  +I  + +     +  D +++M  +G   ++VSY TLIN  CK  KL  A +
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +ME +G   +   + +LIDG C  G I+ A    E M K G + NL  YN ++D L 
Sbjct: 889 VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMV 395
            +GK+  A ++   +  K    D FTY+S++
Sbjct: 949 MNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 4/376 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P   +  +L+D   +   F     +   + E+   P    Y   I  A + S +   
Sbjct: 512 GIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 571

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L+L + M    I P V+ YN L+  L ++ +  +A ++F +M+   L P   T+N +++G
Sbjct: 572 LELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDG 631

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK+   + + ++   ++     P L+T+N L+KGL KAG +  A  +L E+ D G  P+
Sbjct: 632 YCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           A T++ +      N K    L +       G   + +    ++ A  K G++++A + + 
Sbjct: 692 AFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILG 751

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + +  G+  + V YNT+I+ Y ++G L  A + +D MEKQG + D   +  LI   C+ G
Sbjct: 752 REMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           +++ A   +  M   G   ++E YN ++   G+  + D   ++ + ME    + +  +Y 
Sbjct: 812 DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYG 871

Query: 393 SMVHNLCKAKRLPSAS 408
           ++++ LCK  +L  A 
Sbjct: 872 TLINCLCKGSKLLEAQ 887



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 193/446 (43%), Gaps = 66/446 (14%)

Query: 4    KLSTRLLNICVCTFCKANRLEKAEAII------------------IDGI----------- 34
            K++    +I +   CK  ++EKAE I+                  IDG            
Sbjct: 724  KMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARM 783

Query: 35   ------RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
                  + G+ PD + YN LI  +C+    +     +N+M+  G+SP V TYN LI G  
Sbjct: 784  KIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYG 843

Query: 89   RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
            R        DLL EM + G  P+V SY +L++CL +  K  EA  V +DM    ++P   
Sbjct: 844  RKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVR 903

Query: 149  TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
             +N++++G C     ++A R    + K G    LVTYN LI GL   G+L  A  +L E+
Sbjct: 904  IYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEI 963

Query: 209  GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--------------TFDG-- 252
               G  P+  TY +++         +  + +   MK  G               T +G  
Sbjct: 964  SRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIE 1023

Query: 253  -----FG----------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
                 FG          Y  V+  +   G + +A +  +QM+   + LD  +YN+LI   
Sbjct: 1024 LTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQ 1083

Query: 298  CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
             K GKL     L+DEM+ +  E +  T+ I++ G C+  +  GA +    M + G   ++
Sbjct: 1084 LKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDV 1143

Query: 358  EAYNCIVDRLGKDGKIDHAINVFESM 383
               + +V  L ++ +   A NV   M
Sbjct: 1144 CIGDELVSGLKEEWRSKEAENVISEM 1169



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 153/347 (44%), Gaps = 10/347 (2%)

Query: 6    STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
            S    NI +  + +    +K   ++ +    G +P+VV+Y  LI+  C+         + 
Sbjct: 831  SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 890

Query: 66   NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
              M + G+SP+V  YN LI G      +  +    +EM + GI  ++ +YN+L+  L   
Sbjct: 891  RDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950

Query: 126  GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR---MFRGLQKHGFVPEL 182
            GK  EA  +  ++    L P   T+N +++G    R+  N  R   ++  ++  G  P L
Sbjct: 951  GKLAEAEDMLLEISRKGLKPDVFTYNSLISGY---RFAGNVQRCIALYEEMKTSGIKPTL 1007

Query: 183  VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             TY++LI  LC    +   + I    G+    P+ + Y  ++ C   +        +   
Sbjct: 1008 KTYHLLI-SLCTKEGIELTKKI---FGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQ 1063

Query: 243  MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            M  K    D   Y ++I   +K+G+L E    +++M    ++ +  +Y+ ++  +C+   
Sbjct: 1064 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKD 1123

Query: 303  LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
               AY+   EM+++G   D      L+ GL +    K A   +  MN
Sbjct: 1124 YMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMN 1170



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/468 (21%), Positives = 187/468 (39%), Gaps = 55/468 (11%)

Query: 22  RLEKAEAIIID----GIRLGVLPDVVT------------YNMLIDAYCQFVSFDAGYTIL 65
           R+++A  I +D     ++L + P   T            Y + I     F  F    T++
Sbjct: 312 RIKRASKITMDIREKPLKLKMFPSKPTQLKKLLSKLLRFYYVKIWVSFNFAEFSGSSTMV 371

Query: 66  NRMREAGISPDVVT--YNSLIAGATRNSLLSCSLDLLDEMLEMGIPP------DVWSYNS 117
            R+R    S    T  +    + +    L S S D   E      PP      D   +  
Sbjct: 372 TRLRLVSRSSRYATVKFTESFSASCSCRLFSASTDPESESQPAQAPPTNPVTGDEERHEK 431

Query: 118 L--MHCLFQLGKPDEANRVFQDMICGDLTPCTAT----------------------FNIM 153
           L  +  L Q  + + A  V   ++  D  P T+                        +++
Sbjct: 432 LRNLRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVL 491

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           LN   +++    A  +F  L+  G  P   +  +L+  L K  + R    +   + +S  
Sbjct: 492 LN---ESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDF 548

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+   Y   ++   +      GLE+ + MK    +   F Y  +I    K+ ++K+A  
Sbjct: 549 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQ 608

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M+   +   +++YNTLI+ YCK+G  E ++ + + M+    E    T   L+ GL 
Sbjct: 609 LFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLF 668

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           KAG ++ A   L  M   GF  +   ++ + D    + K D A+ V+E+        +++
Sbjct: 669 KAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           T S +++ LCK  ++  A ++L   +  G+   +     ++DG    G
Sbjct: 729 TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKG 776


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 201/438 (45%), Gaps = 43/438 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  ++E+A  ++      GV P++  YN LID+ C+  +FD    + +RM + G+ P+ V
Sbjct: 344 KRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV 403

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQ 136
           TY+ LI    R   L  +L  L EM++MG+ P V+ YNSL+  HC F  G    A  +  
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKF--GDISAAESLMA 461

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +MI   L P   T+  ++ G C     + ALR++  +   G VP + T+  L+ GL +AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAG 521

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +R A  +  E+ +    PN +TY  +++            E L+ M  KG   D + Y 
Sbjct: 522 LIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I      G+  EA  +++ +     +L+ + Y  L++ +C+EGKLE A  +  +M  +
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLR 641

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + D   + +LIDG  K  + K     L+ M+  G   +   Y  ++D   K G    A
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +++ M     V +  TY+                                   AV++G
Sbjct: 702 FGIWDLMINEGCVPNEVTYT-----------------------------------AVING 726

Query: 433 LRHSGCRREAKKIQSKIR 450
           L  +G   EA+ + SK+R
Sbjct: 727 LCKAGFVNEAEILCSKMR 744



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 200/413 (48%), Gaps = 4/413 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+  +L+ A + + + I +G+ P V  YN LI+ +C+F    A  +++  M  
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMIN 465

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P VVTY SL+ G      ++ +L L  EM   GI P ++++ +L+  LF+ G   +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRD 525

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F +M   ++ P   T+N+M+ G C+      A      + + G VP+  +Y  LI 
Sbjct: 526 AVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIH 585

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G+   A+  +  L       N I YT ++    R  K +  L +   M  +G   
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I   +K    K     +++M   G++ D V Y ++I+   K G  + A+ + 
Sbjct: 646 DLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M  +G   ++ T+T +I+GLCKAG +  A +    M       N   Y C +D L K 
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKG 765

Query: 371 -GKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            G +  A+ +  ++    + ++ TY+ ++   C+  R+  AS+L+   +  GV
Sbjct: 766 VGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGV 818



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 186/376 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  ++ +A  I  D     + PDVVTY  L+   C+   F+ G  +++ M  
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR 325

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SP     +SL+ G  +   +  +L+L+  + E G+ P+++ YN+L+  L +    DE
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE 385

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    L P   T++I+++  C+    D AL     +   G  P +  YN LI 
Sbjct: 386 AELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN 445

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G +  A  ++ E+ +    P  +TYT++M       K    L +   M  KG   
Sbjct: 446 GHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVP 505

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             + + T+++   + G +++A     +M    V+ + V+YN +I  YC+EG +  A+  L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFL 565

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM ++G   D Y++  LI GLC  G    A++ ++ ++K   + N   Y  ++    ++
Sbjct: 566 NEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625

Query: 371 GKIDHAINVFESMEVK 386
           GK++ A++V + M ++
Sbjct: 626 GKLEEALSVCQDMGLR 641



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 184/413 (44%), Gaps = 8/413 (1%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D I +G+ PDV  Y  +I + C+         ++ +M   G   ++V YN LI G  +  
Sbjct: 217 DMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQ 276

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +  ++ +  ++    + PDV +Y +L+  L ++ + +    +  +M+    +P  A  +
Sbjct: 277 KVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVS 336

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            ++ GL K    + AL + + + + G  P +  YN LI  LCK      A  +   +G  
Sbjct: 337 SLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKI 396

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  PN +TY+ ++    R  K    L  L  M   G     + Y ++I    K G +  A
Sbjct: 397 GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAA 456

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              M +M+   ++  +V+Y +L+  YC +GK+  A  L  EM  +G     YT T L+ G
Sbjct: 457 ESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSG 516

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 387
           L +AG I+ A      M +     N   YN +++   ++G +  A      M     V D
Sbjct: 517 LFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPD 576

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           +++Y  ++H LC   +  S +K+ +  L  G   L    +    GL H  CR 
Sbjct: 577 TYSYRPLIHGLCLTGQ-ASEAKVFVDGLHKGNCEL---NEICYTGLLHGFCRE 625



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 200/427 (46%), Gaps = 14/427 (3%)

Query: 30  IIDGI--------RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           ++DG+        ++ +LP+V T + L+    +F  F     + + M   GI PDV  Y 
Sbjct: 172 VLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYT 231

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            +I        LS + +++ +M   G   ++  YN L+  L +  K  EA  + +D+   
Sbjct: 232 GVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK 291

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           +L P   T+  ++ GLCK +  +  L M   + +  F P     + L++GL K G++  A
Sbjct: 292 ELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEA 351

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             ++K + + G +PN   Y  ++    + R +     +   M + G   +   Y  +I  
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDM 411

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F + G+L  A  ++ +M+  G++  +  YN+LIN +CK G + AA  L+ EM  +  E  
Sbjct: 412 FCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT 471

Query: 322 KYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
             T+T L+ G C  G I K  RL+ E   K G   ++  +  ++  L + G I  A+ +F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIVPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 381 ESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
             M    VK +  TY+ M+   C+   +  A + L   ++ G+     + + ++ GL  +
Sbjct: 531 TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLT 590

Query: 437 GCRREAK 443
           G   EAK
Sbjct: 591 GQASEAK 597



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 166/394 (42%), Gaps = 41/394 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C   ++ KA  +  +    G++P + T+  L+    +         +   M E  + P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN +I G      +S + + L+EM+E GI PD +SY  L+H L   G+  EA     
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +  G+       +  +L+G C+    + AL + + +   G   +LV Y +LI G  K  
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHK 661

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             +    +LKE+ D G  P+ + YT+++    +   +K    I   M  +G   +   Y 
Sbjct: 662 DRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721

Query: 257 TVIAAFVKIGRLKEATDYMEQM---------VTDGVQLDIVS------------------ 289
            VI    K G + EA     +M         VT G  LDI++                  
Sbjct: 722 AVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK 781

Query: 290 --------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
                   YN LI  +C++G++E A  L+  M   G   D  T+T +I  LC+  ++K A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 342 RLHLEYMNKIGFDSNLEAYN------CIVDRLGK 369
                 M + G   +  AYN      C+   +GK
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 160/377 (42%), Gaps = 37/377 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A  +  A  +  +     V P+ VTYN++I+ YC+  +    +  LN M E GI PD  
Sbjct: 519 RAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTY 578

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           +Y  LI G       S +   +D + +     +   Y  L+H   + GK +EA  V QDM
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDM 638

Query: 139 ---------IC--------------------------GDLTPCTATFNIMLNGLCKNRYT 163
                    +C                            L P    +  M++   K    
Sbjct: 639 GLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A  ++  +   G VP  VTY  +I GLCKAG +  A  +  ++      PN +TY   
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCF 758

Query: 224 MKCCFRN-RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           +    +     K  +E+ +A+  KG   +   Y  +I  F + GR++EA++ + +M+ DG
Sbjct: 759 LDILTKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDG 817

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           V  D ++Y T+I+  C+   ++ A  L + M ++G   D+  +  LI G C AG +  A 
Sbjct: 818 VSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877

Query: 343 LHLEYMNKIGFDSNLEA 359
                M + G   N E 
Sbjct: 878 ELRNEMLRQGLKPNTET 894



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 4/281 (1%)

Query: 17  FCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           FC+  +LE+A ++  D G+R GV  D+V Y +LID   +         +L  M + G+ P
Sbjct: 622 FCREGKLEEALSVCQDMGLR-GVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKP 680

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D V Y S+I   ++      +  + D M+  G  P+  +Y ++++ L + G  +EA  + 
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILC 740

Query: 136 QDMICGDLTPCTATFNIMLNGLCKN-RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             M  G+  P   T+   L+ L K       A+ +   + K G +    TYN+LI+G C+
Sbjct: 741 SKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCR 799

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GR+  A  ++  +   G +P+ ITYTT++    R    K  +E+ ++M  KG   D   
Sbjct: 800 QGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVA 859

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           Y T+I      G + +AT+   +M+  G++ +  +  T I+
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 132/288 (45%), Gaps = 5/288 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           F++++    ++R   + + +F+ +  K   +PE+ T + L+ GL K      A  +  ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            + G  P+   YT +++     +      E++  M+  G   +   Y  +I    K  ++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA    + +    ++ D+V+Y TL+   CK  + E    ++DEM +  F   +   + L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           ++GL K G ++ A   ++ + + G   N+  YN ++D L K    D A  +F+ M     
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +  TYS ++   C+  +L +A   L   +  G++       ++++G
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 54/106 (50%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N+ +  FC+  R+E+A  +I   I  GV PD +TY  +I   C+         + 
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELW 845

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
           N M E GI PD V YN+LI G      +  + +L +EML  G+ P+
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPN 891



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 5/197 (2%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +I  +V+  R+ +     + M+T    L ++ + + L++   K      A  L D+M   
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D Y +T +I  LC+  ++  A+  +  M   G D N+  YN ++D L K  K+  A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + + + +  K    D  TY ++V  LCK +      +++   L+      ++A  ++V+G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341

Query: 433 LRHSGCRREAKKIQSKI 449
           LR  G   EA  +  ++
Sbjct: 342 LRKRGKVEEALNLVKRV 358


>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
          Length = 975

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 181/373 (48%), Gaps = 4/373 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            K ++   NI VC  CK  +L+ A A+  D I LG    ++ +N LI   C     + GY
Sbjct: 436 AKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGY 495

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            I N+M++ G++P   TYNSL  G  R      +LDLL EM   G PP + +   ++  L
Sbjct: 496 GIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQL 555

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              G+  EA +    M+     P   T++  +NG+C     D+AL +FR +    ++P++
Sbjct: 556 CFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDV 615

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V +NILI G  K+ +L  A+ I++E+ + G  P+ +TY  ++  C +  + +  +  L  
Sbjct: 616 VAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDK 675

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M  +        Y ++I  F   GR  EA     +M   G   + ++Y   IN   K G+
Sbjct: 676 MVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGR 735

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYN 361
           +E A    +EM  +GFE D ++    I+ L   G  +KG  L  E + K  + +NL+   
Sbjct: 736 IETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKDTYGNNLKMVG 795

Query: 362 CI---VDRLGKDG 371
            I   V  L KDG
Sbjct: 796 LINEAVVELSKDG 808



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 211/459 (45%), Gaps = 26/459 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS + L++ V  F K  R++KA  +    +  G + D+  Y++LI+  CQ         
Sbjct: 277 RLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVK 336

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCL 122
           +   M+ +G++PDV     +I    R    +     ++E  E +     V  YN ++  L
Sbjct: 337 LFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEEL 396

Query: 123 FQLGKPDEANRVFQDMICG-------------------DLTPCTATFNIMLNGLCKNRYT 163
              G+ + A ++ + M+CG                   D  P + +FNI++ GLCK +  
Sbjct: 397 VHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKL 456

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D AL + + +   G   +++ +N LI  LC   RL     I  ++ D G  P+  TY ++
Sbjct: 457 DMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSL 516

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT-VIAAFVKIGRLKEATDYMEQMVTDG 282
                R +  K  L++L  M+  G+       CT ++      GR+ EA  +++ M+  G
Sbjct: 517 FYGICRRKDPKAALDLLREMQTNGHP-PWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              DIV+Y+  +N  C  G+++ A  L  ++  + +  D   H ILI+G  K+  +  A+
Sbjct: 576 FLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQ 635

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNL 398
             +E M + G   ++  YN ++D   K G+I+ AI+  + M  ++      TY+S++   
Sbjct: 636 KIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGF 695

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           C A R   A KL     + G      A  A ++GLR  G
Sbjct: 696 CSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCG 734



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 183/481 (38%), Gaps = 74/481 (15%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLL 93
            G  P+  TYN L+DA  +    D     L  M  R    S D  T  SL+         
Sbjct: 168 FGCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRP 227

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             + D+   M E+G   D     +LM    + GK D A  +   M    +     T +++
Sbjct: 228 DDANDVFQRMSELGWV-DEHVLTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVL 286

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G  K    D A+ MF  +  +GFV +L  Y++LI+GLC+   +  A  + KE+  SG 
Sbjct: 287 VHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGV 346

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-----YCTVIAAFVKIGRL 268
           AP+      +++   R   +     ++     +   +   G     Y  V+   V  G +
Sbjct: 347 APDVRLLKKVIEAFCREGDFA----VIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEV 402

Query: 269 KEATDYMEQMVTDG--VQLDIV-----------------SYNTLINLYCKEGK------- 302
           + A   +  MV  G  V  D+                  S+N ++   CK  K       
Sbjct: 403 EAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALAL 462

Query: 303 ----------------------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
                                       LE  Y + ++M+  G    ++T+  L  G+C+
Sbjct: 463 TKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICR 522

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
             + K A   L  M   G    ++    +V +L   G++  A+   + M     + D  T
Sbjct: 523 RKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVT 582

Query: 391 YSSMVHNLCKAKRLPSASKLL--LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           YS+ ++ +C    +  A  L   +SC      ++  A   +++G R S    EA+KI  +
Sbjct: 583 YSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVV--AHNILINGFRKSSKLDEAQKIMEE 640

Query: 449 I 449
           +
Sbjct: 641 M 641



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 9/272 (3%)

Query: 118 LMHCLFQLGKPDEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           L+ CL   G PD A R F         TP + T+N +L+ L K    D+A    R +   
Sbjct: 144 LLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQARLREMVAR 203

Query: 177 ---GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G V +  T   L++  C AGR   A  + + + + G     +  TT+M    +  K 
Sbjct: 204 CGDGSV-DKYTLTSLLRCYCNAGRPDDANDVFQRMSELGWVDEHV-LTTLMVAFSKWGKV 261

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              +E+L +M+  G          ++  F K GR+ +A D   +MV+ G  +D+  Y+ L
Sbjct: 262 DGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVL 321

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN--IKGARLHLEYMNKI 351
           I   C++  +  A  L  EM+  G   D      +I+  C+ G+  + G  ++ E    +
Sbjct: 322 IEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFIN-ENAEYL 380

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              S +  YN +++ L   G+++ A  +  SM
Sbjct: 381 KSGSVVPLYNVVLEELVHCGEVEAAYQLLRSM 412


>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 580

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 217/446 (48%), Gaps = 8/446 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANRL+KA  +I   +  G++PD   Y  L++  C+  +      ++ +M + G   +
Sbjct: 119 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSN 178

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+L+ G      L+ SL  ++ +++ G+ P+ ++Y+ L+   ++    D+A ++  
Sbjct: 179 TVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKERGTDQAVKLLD 238

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++I     P   ++N++L G CK   TD+A+++FR L   GF   +V+YNIL++ LC  G
Sbjct: 239 EIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDG 298

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR---KGYTFDGF 253
           R   A  +L E+     AP+ +TY  ++     + + +  +++L  M +     +     
Sbjct: 299 RWDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTAT 358

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VIA   K G++      +++M+    + +  +Y+ +  L    GK++ A+ ++  +
Sbjct: 359 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQSL 418

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +   C    +  +I  +C+ GN   A   L  M + GFD +   Y+ ++  L  +G  
Sbjct: 419 SNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 478

Query: 374 DHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
             A+ V   ME  +        +++M+  LCK +R   A ++    +       ++    
Sbjct: 479 IGAMEVLSIMEESEYHKPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNETTYAI 538

Query: 429 VVDGLRHSGCRREAKKIQSKIRMAKI 454
           +V+G+ H      AK++  ++R  K+
Sbjct: 539 IVEGIAHEDELELAKEVLEELRSRKV 564



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 185/414 (44%), Gaps = 43/414 (10%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   C    L ++   +   ++ G+ P+  TY+ L++A  +    D    +L
Sbjct: 178 NTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKERGTDQAVKLL 237

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++ L  E+   G   +V SYN L+ CL   
Sbjct: 238 DEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCD 297

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK---HGFVPEL 182
           G+ DEAN +  +M  GD  P   T+NI++N L  +  T+ A+++ + + K   H F    
Sbjct: 298 GRWDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTA 357

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            +YN +I  LCK G++      L E+      PN  TY+ I   C  N K +    I+ +
Sbjct: 358 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQS 417

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +  K         CT               D+               Y ++I   C++G 
Sbjct: 418 LSNKQKC------CT--------------HDF---------------YKSVITSMCRKGN 442

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF-DSNLEAYN 361
             AA+ LL EM + GF+ D +T++ LI GLC  G   GA   L  M +  +    ++ +N
Sbjct: 443 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFIGAMEVLSIMEESEYHKPTVDNFN 502

Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
            ++  L K  + D A+ VFE M     + +  TY+ +V  +     L  A ++L
Sbjct: 503 AMILGLCKIRRTDLALEVFEMMVGKKRMPNETTYAIIVEGIAHEDELELAKEVL 556



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 145/294 (49%), Gaps = 3/294 (1%)

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           LS +   L+ ++  G  P+V     L++ L +  +  +A RV + M+   + P  + +  
Sbjct: 90  LSDTFSHLECLVTDGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 149

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++N LCK      A+++   ++ HGF    VTYN L++GLC  G L  +   ++ L   G
Sbjct: 150 LVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRG 209

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            APNA TY+ +++  ++ R     +++L  +  KG   +   Y  ++  F K GR  +A 
Sbjct: 210 LAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAM 269

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               ++   G + ++VSYN L+   C +G+ + A  LL EM+         T+ ILI+ L
Sbjct: 270 KLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPSVVTYNILINSL 329

Query: 333 CKAGNIKGARLHLEYMNK---IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
              G  + A   L+ M+K     F     +YN ++ RL K+GK+D  +   + M
Sbjct: 330 AFHGRTEQAMQVLKEMSKGHHHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 383



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 6/205 (2%)

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           GH PN    T ++    +  + K  + ++  M   G   D   Y  ++    K G +  A
Sbjct: 104 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 163

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              +E+M   G   + V+YN L+   C  G L  +   ++ + ++G   + +T++ L++ 
Sbjct: 164 MQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEA 223

Query: 332 LCKA-GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
             K  G  +  +L  E + K G   NL +YN ++    K+G+ D A+ +F  + VK    
Sbjct: 224 AYKERGTDQAVKLLDEIIAK-GGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKA 282

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLL 411
           +  +Y+ ++  LC   R   A+ LL
Sbjct: 283 NVVSYNILLRCLCCDGRWDEANSLL 307



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           E  L   +  L+ +   G + +    T L+  LCKA  +K A   +E M   G   +  A
Sbjct: 87  EPSLSDTFSHLECLVTDGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 146

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  +V++L K G + +A+ + E ME      ++ TY+++V  LC    L  + + +   +
Sbjct: 147 YTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 206

Query: 416 KSGV 419
           + G+
Sbjct: 207 QRGL 210


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 201/413 (48%), Gaps = 8/413 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C   R+ +A A++   +  G+  DVVTY  +++  C+     +   +L++M 
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E  I PDVV Y+++I    ++   S +  L  EMLE GI P+V++YN ++      G+  
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+ +DMI  ++ P   TFN +++   K      A ++   +      P+ VTYN +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK  R   A    K + D   +P+ +T+ TI+    R ++   G+++L  + R+G  
Sbjct: 409 YGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y T+I  F ++  L  A D  ++M++ GV  D ++ N L+  +C+  KLE A  L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + ++    + D   + I+I G+CK   +  A      +   G + +++ YN ++     
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
              I  A  +F  M+      D+ TY++++    KA  +  + +L+     +G
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 166/340 (48%), Gaps = 4/340 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK      A+ +  + +  G+ P+V TYN +ID +C F  +     +L  M E  I+PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+T+N+LI+ + +   L  +  L DEML   I PD  +YNS+++   +  + D+A  +F 
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M     +P   TFN +++  C+ +  D  +++ R + + G V    TYN LI G C+  
Sbjct: 426 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A+ + +E+   G  P+ IT   ++     N K +  LE+   ++      D   Y 
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K  ++ EA D    +   GV+ D+ +YN +I+ +C +  +  A +L  +M+  
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           G E D  T+  LI G  KAG I  +   +  M   GF  +
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/443 (22%), Positives = 207/443 (46%), Gaps = 23/443 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---------------Q 54
            NI +  FC  ++L  + +      +LG  PDVVT+N L+   C                
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
              F     + ++M E G++P V+T+N+LI G      +  +  L+++M+  G+  DV +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y ++++ + ++G    A  +   M    + P    ++ +++ LCK+ +  +A  +F  + 
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           + G  P + TYN +I G C  GR   A+ +L+++ +    P+ +T+  ++    +  K  
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++   M  +    D   Y ++I  F K  R  +A    + M +     D+V++NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTII 439

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           ++YC+  +++    LL E+ ++G   +  T+  LI G C+  N+  A+   + M   G  
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            +    N ++    ++ K++ A+ +FE +++     D+  Y+ ++H +CK  ++  A  L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559

Query: 411 LLSCLKSGVRILKSAQKAVVDGL 433
             S    GV         ++ G 
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGF 582



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 4/247 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +  FCK NR + A+ +      L   PDVVT+N +ID YC+    D G  +L 
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +   G+  +  TYN+LI G      L+ + DL  EM+  G+ PD  + N L++   +  
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EA  +F+ +    +   T  +NI+++G+CK    D A  +F  L  HG  P++ TYN
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ++I G C    +  A  +  ++ D+GH P+  TY T+++ C +  +    +E++S M+  
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636

Query: 247 GYTFDGF 253
           G++ D F
Sbjct: 637 GFSGDAF 643



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 200/449 (44%), Gaps = 30/449 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLP-DVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +  F + NR + A ++    + +  +P ++ ++N+LI  +C         +   ++ 
Sbjct: 110 NKVIGVFVRMNRPDVAISLY-RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G  PDVVT+N+L+ G      +S +L L   M+E G                      
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-------------------- 208

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  M+   LTP   TFN ++NGLC       A  +   +   G   ++VTY  ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+CK G  ++A  +L ++ ++   P+ + Y+ I+    ++  +     + S M  KG  
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + F Y  +I  F   GR  +A   +  M+   +  D++++N LI+   KEGKL  A  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            DEM  +    D  T+  +I G CK      A+   + M       ++  +N I+D   +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
             ++D  + +   +     V ++ TY++++H  C+   L +A  L    +  GV      
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              ++ G   +    EA ++   I+M+KI
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKI 533



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           F S D      + M  +      V  N +I    R +    ++ L  +M    IP +++S
Sbjct: 84  FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           +N L+ C     K   +   F  +      P   TFN +L+GLC       AL +F  + 
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 175 KHGFV---------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           + GF+               P ++T+N LI GLC  GR+  A  ++ ++   G   + +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y TI+    +    K  L +LS M+      D   Y  +I    K G   +A     +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 338
             G+  ++ +YN +I+ +C  G+   A  LL +M ++    D  T   LI    K G + 
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           +  +L  E +++  F   +  YN ++    K  + D A ++F+ M   D  T+++++   
Sbjct: 384 EAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           C+AKR+    +LL    + G+     A     + L H  C  +       +    ISH
Sbjct: 443 CRAKRVDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 109/210 (51%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +C+A R+++   ++ +  R G++ +  TYN LI  +C+  + +A   +   M 
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PD +T N L+ G   N  L  +L+L + +    I  D  +YN ++H + +  K D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F  +    + P   T+N+M++G C      +A  +F  ++ +G  P+  TYN LI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           +G  KAG +  +  ++ E+  +G + +A T
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFT 644


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 177/375 (47%), Gaps = 4/375 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           +VV Y+++ID  C+    D G+   N M   G+ P+  TY SLI G            L+
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           DEM+  G+   V+ +  L+  L + G   EA  +F +M+     P   T   ++ G C  
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 303

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A  +F  + + GF  ++ TYN+ I G CK GR+R A  +  E+   G  PN +TY
Sbjct: 304 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 363

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            +++ C  +  +     EI+  M R G T D    C ++    K  RL +A     Q+V 
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE 423

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+  D+ SY  LI+  C   ++  A  LL +M  +       T++ LIDGLC++G I  
Sbjct: 424 SGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISN 483

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A   L  M+  G   +   Y+ ++D L K   +D A+ +F  M  +    D   Y+ M+ 
Sbjct: 484 AWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 543

Query: 397 NLCKAKRLPSASKLL 411
             CK++R+  A  L 
Sbjct: 544 GYCKSERIDEAINLF 558



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 197/405 (48%), Gaps = 4/405 (0%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
            F K +  + +I +   C+   +++      + +  GV P+  TY  LI   C    F  
Sbjct: 179 FFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLE 238

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           G+ +++ M   G+   V  +  LI G  +N +L  + ++ DEM+  G  P++ +  +LM 
Sbjct: 239 GFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
                G  D A  +F  +          T+N+ ++G CK     +A+R+F  + + G VP
Sbjct: 299 GYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP 358

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTYN LI  LCKAG +  A  I+K +  SG  P+ +T   ++    ++++    + + 
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + +   G T D + Y  +I       R+ EA + +  M    +   IV+Y+ LI+  C+ 
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G++  A+ LL+EM  +G   D  T++IL+D L K  ++  A      M K G + ++  Y
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 538

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             ++D   K  +ID AIN+F  M +K    D  TY+ + + + K+
Sbjct: 539 TIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKS 583



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 168/333 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +S  +  + +   CK   L +A  +  + +  G  P++VT   L+  YC   + D    +
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + + E G   DV TYN  I G  +   +  ++ + DEM   G+ P++ +YNSL+ CL +
Sbjct: 313 FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCK 372

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+   A  + + M    LTP   T  I+L+GLCK++  D A+ +F  L + G  P++ +
Sbjct: 373 AGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWS 432

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y ILI G C + R+  A  +L+++      P+ +TY+ ++    R+ +      +L+ M 
Sbjct: 433 YTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG   D   Y  ++ A  K   L EA     QM+  G++ D++ Y  +I+ YCK  +++
Sbjct: 493 VKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
            A  L  EM  +    D  T+TIL + + K+G+
Sbjct: 553 EAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 169/355 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   +  +   ++ + IR G+   V  + +LID  C+         + + M   G  P+
Sbjct: 230 LCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPN 289

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VT  +L+ G      +  + +L D + E G   DVW+YN  +H   ++G+  +A RVF 
Sbjct: 290 IVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFD 349

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T+N +++ LCK      A  + + + + G  P++VT  IL+ GLCK+ 
Sbjct: 350 EMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSK 409

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  +  +L +SG  P+  +YT ++  C  +R+    + +L  M  K        Y 
Sbjct: 410 RLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYS 469

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    + GR+  A   + +M   G   D ++Y+ L++   K+  L+ A  L ++M K+
Sbjct: 470 CLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKR 529

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           G E D   +TI+IDG CK+  I  A      M+      ++  Y  + + + K G
Sbjct: 530 GLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 191/405 (47%), Gaps = 53/405 (13%)

Query: 56  VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           VSF   ++I  ++ + G   D V  N+++ G   N  +  +L+  DE++  G   +  SY
Sbjct: 88  VSFS--FSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 116 NSLMHCLFQLGKPDEANRVFQ--------------------------DMIC--GDLTPCT 147
             L++ L + G+ +EA  + +                          D +C  G +    
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 148 ATFNIML-NGLCKNRYTDNALRMFRG-------LQKHGFVPELV---------TYNILIK 190
             +N M+ NG+C N +T  +L   RG       L+  G V E++          + +LI 
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSL--IRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLID 263

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G L  AR +  E+ + G+ PN +T T +M          +  E+  A+   G+  
Sbjct: 264 GLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y   I  + K+GR+++A    ++M  +GV  +IV+YN+LI+  CK G++  A+ ++
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M + G   D  T  IL+DGLCK+  +  A L    + + G   ++ +Y  ++      
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443

Query: 371 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLL 411
            ++  A+N+   M +K+      TYS ++  LC++ R+ +A +LL
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 130/301 (43%), Gaps = 47/301 (15%)

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT------ 219
           +  +F  + K G+  + V  N ++KGLC  G +  A     E+ ++G + N ++      
Sbjct: 91  SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150

Query: 220 -------------------------------------YTTIMKCCFRNRKYKLGLEILSA 242
                                                Y+ ++ C  RN     G E  + 
Sbjct: 151 GLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNE 210

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M   G   + F Y ++I     +G+  E    +++M+  G+ + +  +  LI+  CK G 
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L  A  + DEM  +G+E +  T T L+ G C  GN+  AR   + + + GF  ++  YN 
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330

Query: 363 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +    K G++  A+ VF+ M     V +  TY+S++  LCKA  +  A +++ +  +SG
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390

Query: 419 V 419
           +
Sbjct: 391 L 391



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 31/224 (13%)

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
           C F          I   + ++GY  D     TV+      G + +A ++ +++V +G  L
Sbjct: 81  CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           + VSY  LIN  C+ G++  A  LL  +EK              DG    GN+       
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEK--------EKEKEKDGFFVKGNVV------ 186

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
                         Y+ ++D L ++G +D     +  M       + FTY S++  LC  
Sbjct: 187 -------------MYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGV 233

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +      L+   ++ G+ +       ++DGL  +G   EA+++
Sbjct: 234 GKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K   L++A  +    I+ G+ PDV+ Y ++ID YC+    D    +   M    + PD+V
Sbjct: 512 KKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIV 571

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
           TY  L     ++   S     ++ + ++  PP V  Y
Sbjct: 572 TYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 208/444 (46%), Gaps = 7/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R++ A  +  +   +   PDVVTY +LI  +C     +    +L+ M  
Sbjct: 263 NILLKALCDAGRVKDARQLFDE---MASAPDVVTYGILIHGHCALGELENAVKLLDEMVA 319

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+   Y S++A       +S +L ++++M++  +  D   Y +++      G    
Sbjct: 320 GGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVS 379

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R F +M    L     T+  M+NGLC+    + A ++ + +       + VTY +LI 
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A  +   +   G  PN +TYT +     +    +   E+L  M  KG   
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I    K G L++A   M  M T  ++ D+ +Y TLI+  CK G L+ A+ LL
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G +    T+ +L++G C +G ++G +  L++M +     N   YN ++ +   +
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619

Query: 371 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +     +++ M  +D      TY+ ++   CKA+ +  A       ++ G R+  ++ 
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
            A++  L       EA+++   +R
Sbjct: 680 SALIRLLNKKKKFVEARELFHDMR 703



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 160/317 (50%), Gaps = 6/317 (1%)

Query: 17  FCKANRLEKAEAIIID--GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            C+A  LE+AE ++ +    RL V  D VTY +LID YC+       + + N M + G++
Sbjct: 406 LCRAVELEEAEKLLQEMWARRLDV--DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVT 463

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+VVTY +L  G  +   +  + +LL EM   G+  +  +YNSL++ L + G  ++A R 
Sbjct: 464 PNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRT 523

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             DM    L P   T+  +++ LCK+   D A  + + +   G  P +VTYN+L+ G C 
Sbjct: 524 MADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCM 583

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +GR+   + +L  + +    PNA TY ++MK  C  N   K   EI   M+ +    +  
Sbjct: 584 SGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIEN-NMKSTTEIYKGMRSRDVGPNEN 642

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    K   +KEA  + ++M+  G +L   SY+ LI L  K+ K   A  L  +M
Sbjct: 643 TYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDM 702

Query: 314 EKQGFECDKYTHTILID 330
            K+G   +   +   ID
Sbjct: 703 RKEGLTAESDVYDFYID 719



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 194/434 (44%), Gaps = 26/434 (5%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY----------TILNRMREAGISP 75
           A AI+   +R    P        I  Y  F S  A +           +L R+R+ GISP
Sbjct: 172 ARAILSRAVRFPS-PHRHFVEHYISTYKTFSSDPASFDFLLLCLPSAPLLRRLRQYGISP 230

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
                N++++           LD   E+ +     +V SYN L+  L   G+  +A ++F
Sbjct: 231 SPEACNAVLS--------RLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLF 282

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      P   T+ I+++G C     +NA+++   +   G  P    Y  ++  LC  
Sbjct: 283 DEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDK 339

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A  +++++       +   YTT++                  M+RKG   DG  Y
Sbjct: 340 GWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTY 399

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I    +   L+EA   +++M    + +D V+Y  LI+ YCK GK+  A+ + + M +
Sbjct: 400 TTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQ 459

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G   +  T+T L DGLCK G+++ A   L  M+  G + N   YN +++ L K G ++ 
Sbjct: 460 RGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQ 519

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+     M+      D +TY++++  LCK+  L  A  LL   L  G++        +++
Sbjct: 520 AMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMN 579

Query: 432 GLRHSGCRREAKKI 445
           G   SG     KK+
Sbjct: 580 GFCMSGRVEGGKKL 593



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 170/394 (43%), Gaps = 36/394 (9%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L    +  FC    L  A     +  R G+  D VTY  +I+  C+ V  +    +
Sbjct: 359 LDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M    +  D VTY  LI G  +   ++ +  + + M++ G+ P+V +Y +L   L +
Sbjct: 419 LQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK 478

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G    AN +  +M    L     T+N ++NGLCK  Y + A+R    +      P++ T
Sbjct: 479 QGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYT 538

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI  LCK+G L  A  +L+E+ D G  P  +TY  +M                    
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMN------------------- 579

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                    G+C         GR++     ++ M+   +  +  +YN+L+  YC E  ++
Sbjct: 580 ---------GFCMS-------GRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMK 623

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           +   +   M  +    ++ T+ ILI G CKA N+K A    + M + GF     +Y+ ++
Sbjct: 624 STTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALI 683

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
             L K  K   A  +F  M  K+  T  S V++ 
Sbjct: 684 RLLNKKKKFVEARELFHDMR-KEGLTAESDVYDF 716



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 138/297 (46%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++ +A  +    ++ GV P+VVTY  L D  C+     A   +L+ M   G+  +
Sbjct: 441 YCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELN 500

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYNSLI G  +   L  ++  + +M    + PDV++Y +L+  L + G  D A+ + Q
Sbjct: 501 ACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQ 560

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T+N+++NG C +   +   ++   + +    P   TYN L+K  C   
Sbjct: 561 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIEN 620

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +++   I K +      PN  TY  ++K   + R  K  L     M +KG+      Y 
Sbjct: 621 NMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYS 680

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +I    K  +  EA +    M  +G+  +   Y+  I+L   E  LE+   L DE+
Sbjct: 681 ALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDEL 737



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 7/219 (3%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +  ++S + L +  CT+       CKA  LE+A   + D     + PDV TY  LIDA C
Sbjct: 488 LLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALC 547

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +    D  +++L  M + GI P +VTYN L+ G   +  +     LLD MLE  I P+  
Sbjct: 548 KSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAA 607

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YNSLM              +++ M   D+ P   T+NI++ G CK R    AL     +
Sbjct: 608 TYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEM 667

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
            + GF     +Y+ LI+ L K  +   AR +  ++   G
Sbjct: 668 IQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEG 706


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 211/435 (48%), Gaps = 42/435 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCKA ++ +A  ++ +    G+ P +VT+  LI   C+    D    I ++M +  + PD
Sbjct: 62  FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y  +I    + + L  +    + M++ G  PD  +Y  L+H LF+  K ++ +++F+
Sbjct: 122 AFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFE 181

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI------- 189
           +M+    +P   T+  ++NG CK    D AL + R L+  G  P    Y+ LI       
Sbjct: 182 EMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241

Query: 190 --------------------------KGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
                                      GLCKAG+L  A+ +  ++ ++G AP+ ++Y  I
Sbjct: 242 RHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 224 MKCCFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIA-AFVKIGRLKEATDYMEQMVTD 281
           +    ++ +     E++  AM+RK     G   CTV+     K  R++EA   +E+M+  
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERK--CMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359

Query: 282 GVQL-DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           G +   +V+Y+ +I+  CK  +L+ AY++L +M + G   D  T+T +ID  CK G +  
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           AR   + M++ G   ++ AYN ++    +  K+D AI + E M  +    +  + S++V 
Sbjct: 420 ARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVD 479

Query: 397 NLCKAKRLPSASKLL 411
            LCK  R+  A  L+
Sbjct: 480 GLCKESRVEEARLLM 494



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 13/417 (3%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD  TY  LI  +C+         +L  M+ AGI+P +VT+ SLI      +    +L +
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             +M++M + PD + Y  ++  L ++ K D A   F+ M+     P   T+ ++++ L K
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               +   ++F  +   G  PELVTY  ++ G CKAGR+  A  +++ L  +G +P+   
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    ++ ++    E+       G   D   Y + I+   K G+L EA     +M+
Sbjct: 230 YSTLIDGLCKHDRHDEARELFEMA--AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   D VSYN +I   CK+ ++  A  L+D+  ++         T+L+DGLCK+  ++
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347

Query: 340 GARLHLEYMNKIGFDS-NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
            A + LE M + G  + ++  Y+ ++D L K  ++D A  V + M     V D  TY+++
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           +   CK  RL  A +L     + G  +   A   ++ G     CR  A K+   I M
Sbjct: 408 IDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY----CR--AAKVDEAIAM 458



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 182/375 (48%), Gaps = 34/375 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  + +   CK N+L+ A +     ++ G LPD VTY +L+ +  +   ++ G+ I   M
Sbjct: 124 LYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM 183

Query: 69  REAGISPDVVTYNSLIAG----------------------ATRNSLLS------CSLDLL 100
              G SP++VTY +++ G                      +   SL S      C  D  
Sbjct: 184 LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH 243

Query: 101 DEMLEM-----GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           DE  E+     G   DV  Y S +  L + GK DEA  V   MI     P   ++N+++ 
Sbjct: 244 DEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIY 303

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG-HA 214
            LCK+     A  +     +   +P +    +L+ GLCK+ R+  A  IL+ + ++G  A
Sbjct: 304 SLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRA 363

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +TY+ ++    +  +      +L  M+R G   D   Y  +I AF K+GRL EA + 
Sbjct: 364 PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL 423

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M   G  LD+V+YN LI  YC+  K++ A  +++EM  +G + +  + + ++DGLCK
Sbjct: 424 FQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCK 483

Query: 335 AGNIKGARLHLEYMN 349
              ++ ARL +E MN
Sbjct: 484 ESRVEEARLLMEKMN 498



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 6/331 (1%)

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G   + ++ NSL+      G   EA RVF+D +     P   T+  ++ G CK      A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           + +   ++  G  P +VT+  LI+ LC+      A  I  ++ D    P+A  YT ++  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +  K  L       M + G   D   Y  ++ +  K  + ++     E+M++ G   +
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +V+Y T++N YCK G+++ A  L+  ++  G       ++ LIDGLCK      AR   E
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLCKAK 402
                G   ++  Y   +  L K GK+D A    + + E+    D  +Y+ ++++LCK  
Sbjct: 252 M--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           R+  A +L+   ++            +VDGL
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGL 340



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 4/200 (2%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A  R G+  + +   +++  FV  G  +EA    +  +    + D  +Y TLI  +CK  
Sbjct: 7   AKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAE 66

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           ++  A  LL EM+  G      T   LI  LC+      A      M  +    +   Y 
Sbjct: 67  QIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYT 126

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L K  K+D A + FE M     + D  TY+ +VH+L KA +     ++    L  
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186

Query: 418 GVRILKSAQKAVVDGLRHSG 437
           G          VV+G   +G
Sbjct: 187 GHSPELVTYATVVNGYCKAG 206



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCK  RL++A  +       G   DVV YN+LI  YC+    D    ++  M   GI P
Sbjct: 410 AFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQP 469

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
           +VV+ ++++ G  + S +  +  L+++M    +P
Sbjct: 470 NVVSLSTIVDGLCKESRVEEARLLMEKMNFESLP 503


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 190/388 (48%), Gaps = 1/388 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK+ +++ AE ++ + I  G++PD V Y  LID +C+  +  A Y + + M +
Sbjct: 49  NSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEK 108

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I PD + Y ++I G  R   +  +  + ++M   G+ PD  +Y +L+    + G+ ++
Sbjct: 109 QRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEK 168

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M+   LTP   T+  + +GLCK    D A  +   +   G    + TYN L+ 
Sbjct: 169 AFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVN 228

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK+G +R A  +++E+  +G  P+ IT+TT+M    +  +     E+L  M  +G   
Sbjct: 229 GLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               +  ++  F   G L++    +  M+  G+  +  +YN+L+  YC    +     + 
Sbjct: 289 TVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIY 348

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M  +G   D  T+ ILI G CKA N+K A    + M + GF+    +YN I+    K 
Sbjct: 349 KGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKK 408

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHNL 398
            KI  A  +FE M  ++     + ++NL
Sbjct: 409 KKISEARELFEEMR-REGMAADAEIYNL 435



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PDVV+Y+ +I+ YC          ++  M+  G+ P++ TYNS+I    ++  +  +
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +L EM+  GI PD   Y +L+    +LG    A ++F +M    + P    +  ++ G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+      A ++F  +   G  P+ VTY  LI G CK+G +  A  +  ++  SG  PN
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYT +     +  +     E+L  M  KG   +   Y +++    K G +++A   ME
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G+  D +++ TL++ YCK G++  A+ LL EM  +G +    T  +L++G C +G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            ++     L +M + G   N   YN ++ +      +     +++ M     + DS TY+
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            ++   CKA+ +  A  L     + G  +  S+  +++ G        EA+++  ++R
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMR 422



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 174/336 (51%), Gaps = 4/336 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M+  G +PDVV+Y+++I G      L   L L+ EM   G+ P++++YNS++  L + GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A RV ++MI   + P T  +  +++G CK      A ++F  ++K   VP+ + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLC+ G++  A  +  ++   G  P+ +TYTT++    ++ + +    + + M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            T +   Y  +     K+G++  A + + +M   G+QL+I +YN+L+N  CK G +  A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L++EME  G   D  T T L+D  CK G +  A   L  M   G    +  +N +++  
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
              G ++    +   M  K    ++ TY+S++   C
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 180/358 (50%), Gaps = 12/358 (3%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+  ++ +A+ +       GV PD VTY  LID YC+    +  +++ N+M ++G+
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P+VVTY +L  G  +   +  + +LL EM   G+  ++ +YNSL++ L + G   +A +
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++M    + P T TF  +++  CK      A  + R +   G  P ++T+N+L+ G C
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC 301

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDG 252
            +G L     +L  + + G  PN  TY ++MK  C RN   +   EI   M  +G   D 
Sbjct: 302 MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN-MRCTTEIYKGMCARGVMPDS 360

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I    K   +KEA    ++M   G  L   SYN++I  + K+ K+  A  L +E
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           M ++G   D   + + +D     GN++ A L L        D  +E  NC ++R+ K+
Sbjct: 421 MRREGMAADAEIYNLFVDISYGEGNMETA-LEL-------CDEAIE--NCFLNRIKKE 468



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 129/245 (52%), Gaps = 4/245 (1%)

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G AP+ ++Y+T++       + +  L+++  M+ KG   + + Y ++I    K G++ +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              + +M+  G+  D V Y TLI+ +CK G ++AAY L DEMEKQ    D   +T +I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           LC+ G +  A      M   G + +   Y  ++D   K G+++ A ++   M       +
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
             TY+++   LCK  ++ +A++LL      G+++      ++V+GL  SG  R+A K+  
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 448 KIRMA 452
           ++ +A
Sbjct: 245 EMEVA 249


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 40/375 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            N+ +   CK  ++ KA  ++ D    G  P+VV+YN LID YC+       Y    +L 
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M E  +SP++ T+N LI G  ++  L  S+ +  EML+  + P+V SYNSL++ L   G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF---------------- 170
           K  EA  +   M+   + P   T+N ++NG CKN     AL MF                
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405

Query: 171 -------------------RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
                                +++ G VP++ TYN LI GLC+ G +  A+ +  +L   
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+ +T+  +M+   R  + +    +L  M + G       Y  V+  + K G LK A
Sbjct: 466 G-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524

Query: 272 TDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           T+   QM  +  +++++ SYN L+  Y ++GKLE A +LL+EM ++G   ++ T+ I+ +
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584

Query: 331 GLCKAGNIKGARLHL 345
            +   G +     HL
Sbjct: 585 EMVDQGFVPDIEGHL 599



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 190/379 (50%), Gaps = 9/379 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS       +    K NR    E +  + IR  + P+V T+N++I+A C+    +    
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244

Query: 64  ILNRMREAGISPDVVTYNSLIAGATR---NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           ++  M+  G SP+VV+YN+LI G  +   N  +  +  +L EM+E  + P++ ++N L+ 
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
             ++      + +VF++M+  D+ P   ++N ++NGLC       A+ M   +   G  P
Sbjct: 305 GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            L+TYN LI G CK   L+ A  +   +   G  P    Y  ++    +  K   G  + 
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+R+G   D   Y  +IA   + G ++ A    +Q+ + G+  D+V+++ L+  YC++
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRK 483

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA---RLHLEYMNKIGFDSNL 357
           G+   A +LL EM K G +    T+ I++ G CK GN+K A   R  +E   ++    N+
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM--NV 541

Query: 358 EAYNCIVDRLGKDGKIDHA 376
            +YN ++    + GK++ A
Sbjct: 542 ASYNVLLQGYSQKGKLEDA 560



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 169/361 (46%), Gaps = 44/361 (12%)

Query: 57  SFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           S D  Y +   M    I P+V T+N +I    +   ++ + D++++M   G  P+V SYN
Sbjct: 204 SADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYN 262

Query: 117 SLMHCLFQLG---KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +L+    +LG   K  +A+ V ++M+  D++P   TFNI+++G  K+     ++++F+ +
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
                 P +++YN LI GLC  G++  A  +  ++  +G  PN ITY  +          
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL---------- 372

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                                    I  F K   LKEA D    +   G       YN L
Sbjct: 373 -------------------------INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+ YCK GK++  + L +EME++G   D  T+  LI GLC+ GNI+ A+   + +   G 
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467

Query: 354 DSNLEAYNCIVD---RLGKDGKIDHAINVFESMEVKD-SFTYSSMVHNLCKAKRLPSASK 409
             +L  ++ +++   R G+  K    +     M +K    TY+ ++   CK   L +A+ 
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526

Query: 410 L 410
           +
Sbjct: 527 M 527



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 146/348 (41%), Gaps = 47/348 (13%)

Query: 76  DVVTYNSLIA-----GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           D V  NS+IA         NS      +        G      S   LM  L +  +  +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              V+++MI   + P   TFN+++N LCK    + A  +   ++ +G  P +V+YN LI 
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266

Query: 191 GLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           G CK    G++  A  +LKE+ ++  +PN  T+  +                        
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL------------------------ 302

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                      I  F K   L  +    ++M+   V+ +++SYN+LIN  C  GK+  A 
Sbjct: 303 -----------IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            + D+M   G + +  T+  LI+G CK   +K A      +   G       YN ++D  
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411

Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            K GKID    + E ME    V D  TY+ ++  LC+   + +A KL 
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 161/367 (43%), Gaps = 9/367 (2%)

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWS-YNSLMHCLFQLGKPDEANRVFQDM-ICGDLTP 145
            +NS +S SL+L  ++L        +S   S +    + G   + + +F  + +C ++  
Sbjct: 92  VKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCV 151

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
            +   ++++     N   +     F+    +G+    ++   L+  L K  R     ++ 
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           KE+      PN  T+  ++    +  K     +++  MK  G + +   Y T+I  + K+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271

Query: 266 ---GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
              G++ +A   +++MV + V  ++ ++N LI+ + K+  L  +  +  EM  Q  + + 
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            ++  LI+GLC  G I  A    + M   G   NL  YN +++   K+  +  A+++F S
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ++    V  +  Y+ ++   CK  ++     L     + G+         ++ GL  +G 
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 439 RREAKKI 445
              AKK+
Sbjct: 452 IEAAKKL 458



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 7/180 (3%)

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G +L  +S   L+    KE +      +  EM ++  + + +T  ++I+ LCK G +  A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVD---RLGKDGKIDHAINVFESMEVKDS----FTYSSM 394
           R  +E M   G   N+ +YN ++D   +LG +GK+  A  V + M   D      T++ +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +    K   LP + K+    L   V+    +  ++++GL + G   EA  ++ K+  A +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 195/386 (50%), Gaps = 4/386 (1%)

Query: 21  NRLE---KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           NRL    +A A  +  +  GV P+   +NML+    +     +   + + M   G+ P V
Sbjct: 220 NRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTV 279

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VT+N+L++G  + S L+ +  L   M + G+ PDV++Y + M  L + G+  +A  +F++
Sbjct: 280 VTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEE 339

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    + P T  F  +++  CK       L + R +   G   +LV YN L  GLC+   
Sbjct: 340 MRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRD 399

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L+ A  I++E+ ++G  P+ +TYTT++    +  +  + +E+   M  +G   D   Y T
Sbjct: 400 LKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTT 459

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I+   K GR  ++   + +M+  G++ D  +Y  +I+ +CK   ++  + LL EM+ +G
Sbjct: 460 LISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKG 519

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            +    T+ ++++G C  G +K A + L  M  IG   +   YN ++D   K GK+  A 
Sbjct: 520 RKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE 579

Query: 378 NVFESME-VKDSFTYSSMVHNLCKAK 402
            +  +   V D   Y+S+++   K K
Sbjct: 580 ELKSAKGMVSDFGLYTSLINEFVKKK 605



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 3/362 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           +  N+ +    ++ +L  A  +  + +R GV P VVT+N L+   C+    ++   +   
Sbjct: 245 KQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGL 304

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +AG++PDV TY + + G  +   +  ++++ +EM E G+ P+   + +L+    + G 
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN 364

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
                 + ++M    +      +N + NGLC+ R    A  +   ++ +G  P+ VTY  
Sbjct: 365 VAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTT 424

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CK G L  A  + +E+ D G A + +TYTT++    ++ +      IL  M   G
Sbjct: 425 LIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAG 484

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  VI AF K   +K     +++M   G +  +V+YN ++N +C  G+++ A 
Sbjct: 485 LEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNAD 544

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +LL+ M   G   D  T+ IL+DG CK G ++ A    E  +  G  S+   Y  +++  
Sbjct: 545 MLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAE---ELKSAKGMVSDFGLYTSLINEF 601

Query: 368 GK 369
            K
Sbjct: 602 VK 603



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 4/365 (1%)

Query: 50  DAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
           D   +  S    Y    ++ +AG+ P+   +N L+    R+  L+ + ++ DEML  G+P
Sbjct: 217 DLMNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVP 276

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P V ++N+LM  + +    + AN +   M    + P   T+   + GLCK     +A+ M
Sbjct: 277 PTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEM 336

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  +++ G  P  V +  LI   CK G +     + +E+   G   + + Y  +     R
Sbjct: 337 FEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCR 396

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            R  K   +I+  M+  G   D   Y T+I  F K G L  A +  ++M  +GV LD V+
Sbjct: 397 VRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVT 456

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y TLI+   K G+   +  +L EM + G E D  T+T++ID  CK  ++K     L+ M 
Sbjct: 457 YTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQ 516

Query: 350 KIGFDSNLEAYNCIVDR---LGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLP 405
             G    +  YN +++    LG+    D  +N   ++ V  D  TY+ ++   CK  ++ 
Sbjct: 517 NKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVR 576

Query: 406 SASKL 410
            A +L
Sbjct: 577 DAEEL 581



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 54/331 (16%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           ++L+ G+PP+   +N LM  + + GK   A  +F +M+   + P   TFN +++G+C  +
Sbjct: 234 QLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMC--K 291

Query: 162 YTD-NALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +D N+    RGL  K G  P++ TY   ++GLCKAGR++ A  + +E+ + G  PN + 
Sbjct: 292 ASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVV 351

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +T                                   T+I A  K G +    +   +M 
Sbjct: 352 FT-----------------------------------TLIDAHCKEGNVAAGLELHREMA 376

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           T G++ D+V+YN L N  C+   L+AA  +++EM   G + DK T+T LIDG CK G + 
Sbjct: 377 TRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELD 436

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV---KDSFTYSSMV 395
            A    + M+  G   +   Y  ++  L K G+ +D    + E ME     D+ TY+ ++
Sbjct: 437 MAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVI 496

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
              CK            S +K+G ++LK  Q
Sbjct: 497 DAFCKN-----------SDVKTGFKLLKEMQ 516



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 41/274 (14%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  PE   +N+L++ + ++G+L +AR +  E+   G  P  +T+ T+M            
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMS----------- 287

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
                            G C       K   L  A      M   GV  D+ +Y   +  
Sbjct: 288 -----------------GMC-------KASDLNSANALRGLMAKAGVAPDVYTYGAFMQG 323

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDS 355
            CK G+++ A  + +EM ++G   +    T LID  CK GN+  G  LH E   + G  +
Sbjct: 324 LCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATR-GIKT 382

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +L AYN + + L +   +  A ++ E M       D  TY++++   CK   L  A ++ 
Sbjct: 383 DLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMK 442

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
                 GV + +     ++ GL  SG   ++++I
Sbjct: 443 QEMSDEGVALDEVTYTTLISGLSKSGRSVDSERI 476


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 16/418 (3%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + ++ G   D +T+  L+   C    + DA   +L RM E G  PD
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPD 162

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLG------- 126
           V +YN+L+ G    +    +L+LL  M +    G PPDV SYN++++  F+ G       
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTA 222

Query: 127 -KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
              D+A  V   M+   + P   T+N +L+G C +     A+   + ++  G  P +VTY
Sbjct: 223 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 282

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + L+  LCK GR   AR I   +   G  P+  TY T+++   +  +     ++   M R
Sbjct: 283 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   Y T+I      G++ EAT  +  MV+ GV+ DIV+Y TLIN YC+  +++ 
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L  EM   G   +  T+ I++ GL        A+     + K G    L  YN I+ 
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 462

Query: 366 RLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            L K+   D A+ +F+++ + D    + T++ M+  L K  R+  A  L  +   +G+
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 520



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 185/379 (48%), Gaps = 16/379 (4%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P V TY +LI   C+    D G+  L  + + G   D +T+  L+ G   +   S ++
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 98  DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIM 153
           D+ L  M E+G  PDV+SYN+L+  L    +  EA  +   M     G   P   ++N +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 154 LNGLCKN--------RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
           LNG  K         +  D A+ +   + K+G +P+ +TYN ++ G C +G+ + A   L
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           K++   G  PN +TY+++M    +N +     +I  +M ++G   D   Y T++    K 
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GR+ E+    + MV  GV+ DI++YNTLI+  C  GK++ A  LL  M   G + D  T+
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 387

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
             LI+G C+   +  A    + M   G   N+  YN I+  L    +   A  ++ S+  
Sbjct: 388 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 447

Query: 386 KDS----FTYSSMVHNLCK 400
             +     TY+ ++H LCK
Sbjct: 448 SGTQLELSTYNIILHGLCK 466



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 54/419 (12%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQ--------FVSFDAGYTIL 65
            C  NR ++A  ++    D    G  PDVV+YN +++ + +          + D    +L
Sbjct: 173 LCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVL 232

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M + G+ PD +TYNS++ G   +     ++  L +M   G+ P+V +Y+SLM+ L + 
Sbjct: 233 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 292

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  EA ++F  M    L P  AT+  +L G CK      + ++F  + + G  P+++TY
Sbjct: 293 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITY 352

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N LI G C AG++  A  +L  +   G  P+ +TY T++                     
Sbjct: 353 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN-------------------- 392

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                   GYC       ++ R+ +A    ++MV+ GV  +I++YN ++       +  A
Sbjct: 393 --------GYC-------RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 437

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--AYNCI 363
           A  L   + K G + +  T+ I++ GLCK  N+    L + + N    D  LE   +N +
Sbjct: 438 AKELYVSITKSGTQLELSTYNIILHGLCK-NNLTDEALRM-FQNLCLTDLQLETRTFNIM 495

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +  L K G++D A ++F +      V D  TYS M  NL +   L     L LS  ++G
Sbjct: 496 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 16/358 (4%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P V +Y  L+ C  + G+ D       +++         TF  +L GLC ++ T +A+
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 168 RM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD---SGHAPNAITYTTI 223
            +  R + + G +P++ +YN L+KGLC   R + A  +L  + D    G  P+ ++Y T+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 224 MKCCFRN--------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +   F+         +     +E+L+ M + G   D   Y +++  +   G+ KEA   +
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M +DGV+ ++V+Y++L+N  CK G+   A  + D M K+G E D  T+  L+ G CK 
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTY 391
           G +  +    + M +IG   ++  YN ++D     GK+D A  +  SM    VK D  TY
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 387

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++++  C+  R+  A  L    + SGV         ++ GL H+     AK++   I
Sbjct: 388 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI 445



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 174/381 (45%), Gaps = 37/381 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           + T   A  ++KA  ++   ++ GV+PD +TYN ++  YC           L +MR  G+
Sbjct: 216 IQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 275

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY+SL+    +N   + +  + D M + G+ PD+ +Y +L+    + G+  E+ +
Sbjct: 276 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEK 335

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +F  M+   + P   T+N +++G C     D A ++   +   G  P++VTY  LI G C
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 395

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG------ 247
           +  R+  A  + KE+  SG +PN ITY  I++  F  R+     E+  ++ + G      
Sbjct: 396 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 455

Query: 248 -YTFDGFGYC----------------------------TVIAAFVKIGRLKEATDYMEQM 278
            Y     G C                             +I A +K GR+ EA D     
Sbjct: 456 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 515

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             +G+  D+ +Y+ +     ++G LE    L   ME+ G   D      ++  L + G+I
Sbjct: 516 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 575

Query: 339 KGARLHLEYMNKIGFDSNLEA 359
             A  +L  +++  F  +LEA
Sbjct: 576 TRAGTYLFMIDEKHF--SLEA 594



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 16/184 (8%)

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA- 341
           V   + +Y  LI   C+ G+L+  +  L  + K+GF  D  T T L+ GLC       A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSM 394
            + L  M ++G   ++ +YN ++  L  + +   A+ +   M          D  +Y+++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 395 VHNLCK--------AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           ++   K        A+ +  A ++L + +K+GV        +++ G   SG  +EA    
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 447 SKIR 450
            K+R
Sbjct: 268 KKMR 271


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 194/399 (48%), Gaps = 24/399 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG---ATRNSLL 93
           G+ PD+ T N+L +  C       G   +  +   G  PD+VTYN+LI G     R S+ 
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 94  SCSL--------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           +C +              ++ +EM   G+ P+V SY+SL+H     GK +E+ R+F +M+
Sbjct: 65  TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
              + P    FN++++ LCK      A ++     + G + +LVTYN LI G CK G L 
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184

Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
           +AR +   +   G   N I+YT ++    +  K +  + + + M + G   +   Y T++
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLL 244

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
              ++ G++ +A      M   G+ +D   Y   ++  CK G L  A  L +E++   F+
Sbjct: 245 TGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFK 304

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  +++ LIDGLCKAG ++ A    + +++ G   N+   N ++    +  ++D A  +
Sbjct: 305 LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANIL 364

Query: 380 FESME-------VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           FE ME         D  TY++++   C++ +L     LL
Sbjct: 365 FEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLL 403



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 184/394 (46%), Gaps = 20/394 (5%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI-----------------DAY 52
           LNI     C  NR+ +  A +   +R G +PD+VTYN LI                 D  
Sbjct: 13  LNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGL 72

Query: 53  CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           C+    D    I   M+  G+ P+V++Y+SL+ G      L  S  L +EM++ G+ P++
Sbjct: 73  CKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNL 132

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
             +N L+  L + GK  EA ++ +  I   +     T+N +++G CK     +A ++F  
Sbjct: 133 VQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLS 192

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +   G     ++Y ILI G CK  ++  A  +  E+   G  PN  TY+T++    +  K
Sbjct: 193 MPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGK 252

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
                ++   MK  G + D   Y   +    K G L EA +   ++ +   +LD  SY+ 
Sbjct: 253 VGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSR 312

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI- 351
           LI+  CK GK+E A+    ++ ++G + +  T  I+I G C+   +  A +  E M K+ 
Sbjct: 313 LIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKME 372

Query: 352 --GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             G   ++  YN ++    +  K++  +N+   M
Sbjct: 373 ENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 174/378 (46%), Gaps = 26/378 (6%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M  AG+SPD+ T N L       + +S  L  +  +L  G  PD+ +YN+L+  L ++ +
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A              C     I+++GLCK  + D A  +F  ++  G +P +++Y+ 
Sbjct: 61  ISVAT-------------C-----IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSS 102

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G C AG+L  ++ +  E+ D G  PN + +  ++    +  K     ++L    ++G
Sbjct: 103 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRG 162

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y ++I  F KIG L  A      M + G + + +SY  LIN YCK  K+E A 
Sbjct: 163 IILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 222

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L +EM + G   +  T++ L+ GL + G +  A      M   G   +   Y   +D L
Sbjct: 223 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGL 282

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+G +  A+ +F  ++      D  +YS ++  LCKA ++  A +      + G++   
Sbjct: 283 CKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ--- 339

Query: 424 SAQKAVVDGLRHSGCRRE 441
                  + + H  CR E
Sbjct: 340 -PNVVTCNIMIHGFCRVE 356



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 32/307 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +   CK  ++ +A+ ++   I+ G++ D+VTYN LID +C+     +   +   M 
Sbjct: 135 FNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMP 194

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   + ++Y  LI G  +   +  +++L +EM ++G  P+V +Y++L+  L Q GK  
Sbjct: 195 SKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVG 254

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +AN++F  M    ++  +  + I L+GLCKN     A+ +F  L+ + F  +  +Y+ LI
Sbjct: 255 DANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLI 314

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCKAG++  A    K+L   G  PN +T   ++                         
Sbjct: 315 DGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIH------------------------ 350

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
               G+C V     ++ +     + ME+M  +G   DI++YNTL+  +C+  KLE    L
Sbjct: 351 ----GFCRV----EQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNL 402

Query: 310 LDEMEKQ 316
           L +M K+
Sbjct: 403 LHKMFKR 409



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L+P   T NI+ N LC        L    G+ + G++P++VTYN LIKGLC+  R+  A 
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65

Query: 203 WILKE-LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
            I+ + L   GH   A                    EI   MK +G   +   Y +++  
Sbjct: 66  CIIIDGLCKVGHEDEA-------------------KEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F   G+L+E+     +MV  GVQ ++V +N LI++ CKEGK+  A  LL+   ++G   D
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+  LIDG CK G++  AR     M   G + N  +Y  +++   K  K++ A+N++ 
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYN 226

Query: 382 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M    +  +  TYS+++  L +  ++  A+KL      SG+ +        +DGL  +G
Sbjct: 227 EMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNG 286

Query: 438 CRREAKKIQSKIR 450
              EA ++ ++++
Sbjct: 287 VLFEAMELFNELK 299



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 22/168 (13%)

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  D+ + N L N  C   ++      +  + ++G+  D  T+  LI GLC+   I  A
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
                                I+D L K G  D A  +FE M+    + +  +YSS+VH 
Sbjct: 65  TC------------------IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            C A +L  + +L    +  GV+        ++D L   G   EAKK+
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKL 154


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 202/437 (46%), Gaps = 4/437 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA   ++AEA+    I  GV P++ TYN LI  Y     +     +L  M   G  P+
Sbjct: 248 LCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPN 307

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY SL+    +N     +    D M+  GI P V +Y  ++H     G   E + +  
Sbjct: 308 CCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN 367

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++P    FNI  +   K    D A+ +F  +++ G  P+ V+Y  LI  LCK G
Sbjct: 368 LMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLG 427

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A     ++ + G  P+ + +++++       K++   E+   M   G   +   + 
Sbjct: 428 RVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFN 487

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    K GR+ E    ++ +   GV+ D++SYNTLI+ +C  G ++ A  LL+ M   
Sbjct: 488 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 547

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + D +++  L+ G CKAG I  A  H   M   G    +  YN I+  L +  +   A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607

Query: 377 ----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
               +N+  S    D +TY+ +++ LCK+  +  A K+  +    G+++       ++  
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G + +A  + + I
Sbjct: 668 LLKGGRKEDAMDLFAAI 684



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 179/369 (48%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI    + K   ++KA  I     + G+ PD V+Y  LIDA C+    D      N+
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++PD+V ++SL+ G           +L  EML +GI P++  +N+++  L + G+
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E  R+   + C  + P   ++N +++G C     D A ++  G+   G  P+  +YN 
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G CKAGR+ +A    +++  +G  P  +TY TI+   F+ +++    E+   M   G
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
             +D + Y  ++    K   + EA    + + + G+QL+I+++N +I    K G+ E A 
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G   +  T+ ++++ L + G+++        M K G   N +  N +V RL
Sbjct: 679 DLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 738

Query: 368 GKDGKIDHA 376
              G I  A
Sbjct: 739 LHRGDISRA 747



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 211/467 (45%), Gaps = 36/467 (7%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
             N  +C  CK  R+ + + ++ D I  +GV PDV++YN LID +C   + D    +L  
Sbjct: 485 FFNTILCNLCKEGRVMEGQRLV-DSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 543

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G+ PD  +YN+L+ G  +   +  +     +ML  GI P V +YN+++H LFQ  +
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA  ++ +MI         T+NI+LNGLCK+   D A++MF+ L   G    ++T+NI
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I  L K GR   A  +   +  +G   N +TY  +++        +    + SAM++ G
Sbjct: 664 MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC--------- 298
              +      ++   +  G +  A  Y+ ++      ++  + + LI+++          
Sbjct: 724 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAK 783

Query: 299 -------------------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                              K  +++ AY L  EM  +G   D  T+  ++ GL + G   
Sbjct: 784 SLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 843

Query: 340 GAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
            A+ L+L  +N      N+  YN I++ L K   +D A  +F+S+  K    +  T++ M
Sbjct: 844 EAKELYLSMINS-RTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIM 902

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           +  L K  R   A  L  +   +G+       + V + L   G   E
Sbjct: 903 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEE 949



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 36/464 (7%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK  R++ AE      I  GV PD+V ++ L+   C    ++    +   M   GI P
Sbjct: 422 ALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHP 481

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           ++V +N+++    +   +     L+D +  MG+ PDV SYN+L+  HCL   G  DEA++
Sbjct: 482 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL--AGTIDEASK 539

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + + M+   L P + ++N +L+G CK    D+A   FR +  +G  P +VTYN ++ GL 
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +  R   A+ +   + +SG   +  TY  I+    ++      +++   +  KG   +  
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +  +I A +K GR ++A D    +  +G+  ++V+Y  ++    +EG LE    L   M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG-- 371
           EK G   +      L+  L   G+I  A  +L  +++  F       + ++     D   
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQ 779

Query: 372 --------------------------KIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
                                     +ID A ++F  M +K    D  TY++++H L + 
Sbjct: 780 HHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            R   A +L LS + S  ++       +++GL  S C  EA K+
Sbjct: 840 GRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 208/448 (46%), Gaps = 18/448 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF-DAGYTILNRMR 69
           +I +  FC+   LE   A     ++ G   D +  N L++  C      +A   +L RM 
Sbjct: 98  SILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMP 157

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI---PPDVWSYNSLMHCLFQLG 126
           E G  PD V+YN L+ G         +L+LL  M +  +   PP+V SY+++++  F  G
Sbjct: 158 ELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEG 217

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D+   +F +M+   + P   T+  +++GLCK +  D A  +F+ +  +G  P + TYN
Sbjct: 218 QVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYN 277

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G    G+ +    +L+E+   G  PN  TY +++    +N + +       +M  K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK 337

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y  ++  +   G L E  D +  MV +G+  +   +N   + Y K G ++ A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN----- 361
             + ++M +QG   D  ++  LID LCK G +  A +    M   G   ++  ++     
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457

Query: 362 -CIVDRLGKDGKIDHAINVFESMEV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            C VD+  K  ++      FE + V    +   +++++ NLCK  R+    +L+ S    
Sbjct: 458 LCTVDKWEKVEEL-----FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECM 512

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKI 445
           GVR    +   ++DG   +G   EA K+
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKL 540



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 157/377 (41%), Gaps = 30/377 (7%)

Query: 11   NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            NI +   CK+N +++A  +  +    G+  +++T+N++I A  +    +    +   +  
Sbjct: 627  NIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 686

Query: 71   AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             G+  +VVTY  ++        L     L   M + G  P+    N+L+  L   G    
Sbjct: 687  NGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 746

Query: 131  ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT--------------------------- 163
            A      +   + +   +T +++++    + Y                            
Sbjct: 747  AGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARR 806

Query: 164  -DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
             D+A  +FR +   G  P++VTYN ++ GL + GR   A+ +   + +S    N  TY  
Sbjct: 807  IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866

Query: 223  IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
            I+    ++       ++  ++  KG   +   +  +I A +K GR ++A D    +  +G
Sbjct: 867  ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926

Query: 283  VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            +  D+V+Y  +     +EG LE    L   MEK G   D      L+  L + G+I  A 
Sbjct: 927  LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986

Query: 343  LHLEYMNKIGFDSNLEA 359
             +L  +++  F  +LEA
Sbjct: 987  AYLSKLDEKNF--SLEA 1001



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 41/260 (15%)

Query: 59   DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
            D  Y++   M   G++PDVVTYN+++                                  
Sbjct: 808  DDAYSLFREMLMKGLTPDVVTYNTIL---------------------------------- 833

Query: 119  MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
             H LFQ G+  EA  ++  MI         T+NI+LNGLCK+   D A +MF+ L   G 
Sbjct: 834  -HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892

Query: 179  VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
               ++T+NI+I  L K GR   A  +   +  +G  P+ +TY  + +        +    
Sbjct: 893  QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952

Query: 239  ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            +   M++ G   D      ++   ++ G +  A  Y+ ++      L+  + + LI+L+ 
Sbjct: 953  LFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFS 1012

Query: 299  K------EGKLEAAYLLLDE 312
            +         L   Y LL+E
Sbjct: 1013 RGEYQHHAKSLPEKYRLLNE 1032



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 146/356 (41%), Gaps = 32/356 (8%)

Query: 4    KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
            +L+    NI +    K  R E A  +       G++ +VVTY ++++   +  S +   +
Sbjct: 655  QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714

Query: 64   ILNRMREAGISPDVVTYNSLI-----------AGATRNSLLSCSLDLLDEMLEMGIPPDV 112
            + + M + G +P+    N+L+           AGA  + L   +  +      M I   +
Sbjct: 715  LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI--SI 772

Query: 113  WSYNSLMHCLFQLGKP-------------------DEANRVFQDMICGDLTPCTATFNIM 153
            +S +   H    L K                    D+A  +F++M+   LTP   T+N +
Sbjct: 773  FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832

Query: 154  LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
            L+GL +      A  ++  +        + TYNI++ GLCK+  +  A  + + L   G 
Sbjct: 833  LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892

Query: 214  APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
              N IT+  ++    +  + +  +++ +A+   G   D   Y  V    ++ G L+E   
Sbjct: 893  QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952

Query: 274  YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
                M   G  LD    N L+    + G +  A   L +++++ F  +  T + LI
Sbjct: 953  LFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 214/468 (45%), Gaps = 40/468 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF--------------------- 55
           + K   L KA  ++   +++ ++P+V  Y +L+D Y +                      
Sbjct: 421 YAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEEN 480

Query: 56  -VSFDAGYTILNR---MREA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
            + FD     L R   M+EA          GI  DV  Y+SL+ G  +    S +L ++ 
Sbjct: 481 NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQ 540

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM E  +  DV +YN+L   L +LGK  E   VF  MI   LTP   T+N ++N      
Sbjct: 541 EMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQG 599

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            T+NAL +   ++ +G +P +VTYNILI GLCK G +     +L E+   G+ P  I + 
Sbjct: 600 KTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHK 659

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++K   R+RK    L+I   +   G   +   Y T+I    ++G  K+A   + +MV  
Sbjct: 660 FLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIK 719

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+  DIV+YN LI  YC    +E A+    +M   G   +  T+  L++GL   G ++ A
Sbjct: 720 GISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDA 779

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
              +  M + G   N   YN +V   G+ G    +I ++  M  K     + TY+ ++ +
Sbjct: 780 DKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQD 839

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             KA ++  A +LL   L  G     S    ++ G     C+ E  ++
Sbjct: 840 YAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRL 887



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 217/450 (48%), Gaps = 10/450 (2%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +++ +CT       KA + ++AE +    ++L ++P+ VTY  L+D +C+    +   T+
Sbjct: 339 IDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETV 398

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L +M +  + P+VVT++S+I G  +  +L+ ++++L +M++M I P+V+ Y  L+   F+
Sbjct: 399 LQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFR 458

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ + A   +++M    L      F+I+LN L ++     A  + + +   G   ++  
Sbjct: 459 TGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFN 518

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ L+ G  K G    A  +++E+ +     + + Y  + K   R  KY+    + S M 
Sbjct: 519 YSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMI 577

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D   Y +V+  +   G+ + A D + +M + GV  ++V+YN LI   CK G +E
Sbjct: 578 ELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIE 637

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
               +L EM   G+      H  L+    ++          + +  +G + N   YN ++
Sbjct: 638 KVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLI 697

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L + G    A  V   M +K    D  TY++++   C    +  A       L SG+ 
Sbjct: 698 TVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGIS 757

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              +   A+++GL  +G  R+A K+ S++R
Sbjct: 758 PNITTYNALLEGLSTNGLMRDADKLVSEMR 787



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 212/469 (45%), Gaps = 63/469 (13%)

Query: 11  NICVCTFCKANRLEKAEAII----------------------IDGIRLGVLPDVVTYNML 48
           N  V  FCK   L KAE+++                       DG+R  + P VVT+  L
Sbjct: 184 NTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLR-DLQPTVVTWTTL 242

Query: 49  IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
           I AYC+    D  +++  +M  +G+ PDVVT +S++ G  R+  L+ +  LL EM  MG+
Sbjct: 243 IAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGL 302

Query: 109 PPDVWSY-----------------------------------NSLMHCLFQLGKPDEANR 133
            P+  SY                                    ++M  LF+ GK  EA  
Sbjct: 303 DPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEE 362

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +FQ ++  +L P   T+  +L+G CK    + A  + + ++K   +P +VT++ +I G  
Sbjct: 363 MFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYA 422

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G L  A  +L+++      PN   Y  ++   FR  +++        MK  G   +  
Sbjct: 423 KKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNI 482

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +  ++    + G +KEA   ++ +++ G+ LD+ +Y++L++ Y KEG   AA  ++ EM
Sbjct: 483 IFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++  + D   +  L  GL + G  +   +    M ++G   +   YN +++     GK 
Sbjct: 543 TEKDMQFDVVAYNALTKGLLRLGKYEPKSV-FSRMIELGLTPDCVTYNSVMNTYFIQGKT 601

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           ++A+++   M+    + +  TY+ ++  LCK   +     +L   L  G
Sbjct: 602 ENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 7/408 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I +    ++  +++A+++I D +  G+  DV  Y+ L+D Y +  +  A  +++  M
Sbjct: 483 IFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  +  DVV YN+L  G  R         +   M+E+G+ PD  +YNS+M+  F  GK 
Sbjct: 543 TEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKT 601

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  +  +M    + P   T+NI++ GLCK    +  + +   +   G+VP  + +  L
Sbjct: 602 ENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFL 661

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +K   ++ +      I K+L D G   N + Y T++    R    K    +L+ M  KG 
Sbjct: 662 LKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGI 721

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D   Y  +I  +     +++A +   QM+  G+  +I +YN L+      G +  A  
Sbjct: 722 SADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADK 781

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
           L+ EM ++G   +  T+ IL+ G  + GN + + +L+ E + K GF      YN ++   
Sbjct: 782 LVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITK-GFIPTTGTYNVLIQDY 840

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
            K GK+  A  +   M     + +S TY  ++   CK    P   +LL
Sbjct: 841 AKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLL 888



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 204/470 (43%), Gaps = 30/470 (6%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  L N  +  F  +  + + + +  + +  GV+P+V + N+L+ + C+    D G   L
Sbjct: 9   SLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKV--GDLGLA-L 65

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             +R +    D VTYN+++ G  +  L      LL EM++ G+  D  + N L+    Q+
Sbjct: 66  GYLRNSVF--DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQI 123

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G    A  +  +++ G +       N +++G C+      AL +     K+G  P++VTY
Sbjct: 124 GLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTY 183

Query: 186 NILIKGLCKAGRLRTARWILKE------------LGDSG---------HAPNAITYTTIM 224
           N L+   CK G L  A  ++ E            L D G           P  +T+TT++
Sbjct: 184 NTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLI 243

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               ++R       +   M   G   D     +++    + G+L EA   + +M   G+ 
Sbjct: 244 AAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLD 303

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            + VSY T+I+   K G++  A+    +M  +G   D    T ++DGL KAG  K A   
Sbjct: 304 PNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEM 363

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
            + + K+    N   Y  ++D   K G ++ A  V + ME    + +  T+SS+++   K
Sbjct: 364 FQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAK 423

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              L  A ++L   ++  +         ++DG   +G    A     +++
Sbjct: 424 KGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 167/379 (44%), Gaps = 40/379 (10%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MR   + P +  +N L+     +  +S    L  EM+  G+ P+V+S N L+H L ++G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 128 PDEA-----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              A     N VF  +          T+N ++ G CK    D    +   + K G   + 
Sbjct: 61  LGLALGYLRNSVFDHV----------TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDS 110

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT NIL+KG C+ G ++ A WI+  L   G   +AI   T++            L+++  
Sbjct: 111 VTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVED 170

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV------------------TDG-- 282
             + G   D   Y T++ AF K G L +A   + +++                   DG  
Sbjct: 171 GWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLR 230

Query: 283 -VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            +Q  +V++ TLI  YCK   ++  + L ++M   G   D  T + ++ GLC+ G +  A
Sbjct: 231 DLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEA 290

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
            + L  M  +G D N  +Y  I+  L K G++  A N    M V+    D    ++M+  
Sbjct: 291 AMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 350

Query: 398 LCKAKRLPSASKLLLSCLK 416
           L KA +   A ++  + LK
Sbjct: 351 LFKAGKSKEAEEMFQTILK 369



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 12/227 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + N  +   C+    +KA  ++ + +  G+  D+VTYN LI  YC     +  +  
Sbjct: 688 LNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNT 747

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            ++M  +GISP++ TYN+L+ G + N L+  +  L+ EM E G+ P+  +YN L+    +
Sbjct: 748 YSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGR 807

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G   ++ +++ +MI     P T T+N+++    K      A  +   +   G +P   T
Sbjct: 808 VGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSST 867

Query: 185 YNILIKGLCKAG------RL------RTARWILKELGDSGHAPNAIT 219
           Y++LI G CK        RL        A+ +L+E+ + GH P+  T
Sbjct: 868 YDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSEST 914


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 214/484 (44%), Gaps = 55/484 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A R  +AE ++ D +  G  P+VV YN LID YC     +    +  RM   G SP+
Sbjct: 187 LCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPN 246

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI+G  ++  L  ++ L   M++ G+ P+V +Y +L+      G+ D A R+ Q
Sbjct: 247 VRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQ 306

Query: 137 DMICGDLTPCTATFNIMLNGLCKNR-----------------------YTD--------- 164
            M    L P   T +++++ LCK+                        YT          
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366

Query: 165 ---NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
               A R+ + L   GFVP+  TY+ LI GLC+   L  A  +L ++ + G  P+ +TYT
Sbjct: 367 RFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYT 426

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            I+    R        +IL  M   G   D F Y   + ++   GR+++A   M  MV  
Sbjct: 427 IIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDH 486

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNI 338
           GV  ++V+YN LI  Y   G    A+     M   G + ++ ++T+L+  L K   + NI
Sbjct: 487 GVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNI 546

Query: 339 KGAR-----------LH--LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
                          LH  LE M K+   S ++ YNC +  L +  ++D A  +   M+ 
Sbjct: 547 PANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQS 606

Query: 385 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
                    Y+S++   C+ K L  A   + S +KSG      + + ++  L   G  + 
Sbjct: 607 ANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQT 666

Query: 442 AKKI 445
           AK++
Sbjct: 667 AKQV 670



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 189/417 (45%), Gaps = 8/417 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L+N     +C A  L  ++  +   +R G  PD   Y   +  YC+         +  
Sbjct: 76  TTLIN----AYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFV 131

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G      TY +L+ G     ++  ++ +   M   G  PD   Y +++H L   G
Sbjct: 132 LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAG 191

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA  +  D +     P    +N +++G C     + A+ +F  +  +G  P + TY 
Sbjct: 192 RTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYT 251

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK+ +L  A  +   + D+G  PN +TYT +++    + +      +L +M+  
Sbjct: 252 ELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS 311

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + +    +I A  K  R+ EA   +  ++  G++++ + Y +LI+  CK G+  AA
Sbjct: 312 GLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAA 371

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L+  +  QGF  D +T++ LIDGLC+   +  A L L+ M + G   +   Y  I+D 
Sbjct: 372 DRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDE 431

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           L ++   D +  + + M       D FTY+  V + C   R+  A  ++L  +  GV
Sbjct: 432 LVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV 488



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 174/380 (45%), Gaps = 4/380 (1%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY +LI        L  S   L  +L  G  PD  +Y S +    + G    A R+F  M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                     T+  +L+GLC       A+ +F G+Q  G  P+   Y  ++ GLC AGR 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           R A  +L +    G  PN + Y  ++         +L +++   M   G + +   Y  +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I+ F K  +L  A     +MV  G+  ++V+Y  LI   C +G+L+ AY LL  ME  G 
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +++T ++LID LCK   +  A+L L  + + G   N   Y  ++D L K G+   A  
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           + +++     V D+ TYSS++  LC+ K L  A  +L   ++ GV+        ++D L 
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 435 HSGCRREAKKIQSKIRMAKI 454
                  +KKI  K+  A I
Sbjct: 434 REVGADGSKKILDKMIAAGI 453



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 173/381 (45%), Gaps = 4/381 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY  LI+AYC      A    L+ +  AG +PD   Y S + G  R  LL+ +  L   M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G     ++Y +L+H L   G   EA  VF  M      P    +  M++GLC    T
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A  +       GF P +V YN LI G C  G L  A  + + +  +G +PN  TYT +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    ++RK    + + S M   G   +   Y  +I      G+L  A   ++ M   G+
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             +  + + LI+  CK  ++  A LLL  + ++G + ++  +T LIDGLCKAG    A  
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            ++ +   GF  +   Y+ ++D L +  ++  A+ V + M  K       TY+ ++  L 
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 400 KAKRLPSASKLLLSCLKSGVR 420
           +      + K+L   + +G++
Sbjct: 434 REVGADGSKKILDKMIAAGIK 454



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 168/377 (44%), Gaps = 19/377 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  R+ +A+ ++   I+ G+  + + Y  LID  C+   F A   ++  +  
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD  TY+SLI G  R   LS ++ +LD+M+E G+ P   +Y  ++  L +    D 
Sbjct: 381 QGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADG 440

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + ++   MI   + P   T+ I +   C     ++A  M   +  HG  P LVTYN LI 
Sbjct: 441 SKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALIC 500

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G    A    K +  +G  PN  +YT +++   +                   + 
Sbjct: 501 GYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKE-----------------SS 543

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +     +V  +  KI  +K     +E+MV   +  +I  YN  +   C+  +L+ A +LL
Sbjct: 544 NNIPANSV--SIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILL 601

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+       +  +T +I   C+   +  A   ++ M K G+   LE+Y  I+  L ++
Sbjct: 602 IEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEE 661

Query: 371 GKIDHAINVFESMEVKD 387
           G I  A  VF  M  K+
Sbjct: 662 GSIQTAKQVFGDMLSKE 678



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 16/339 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+   L +A  ++ D +  GV P  VTY ++ID   + V  D    IL++M  AGI PD
Sbjct: 397 LCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY   +        +  +  ++  M++ G+ P++ +YN+L+     LG   +A   F+
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK-------HGFVPELV------ 183
            M+     P   ++ ++L  L K   ++N       + K       HG + E+V      
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPS 576

Query: 184 ---TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
               YN  +  LC+  RL  A+ +L E+  +   P+   YT+I+ CC R +     L  +
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
            +M + GY      Y  +I++  + G ++ A      M++     + +++  LI+   ++
Sbjct: 637 DSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQK 696

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           G +     LL  ME++ +      +  L   +  A +I+
Sbjct: 697 GYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQ 735



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 39/295 (13%)

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI------------------ 223
           L TY  LI   C AG L  ++  L  L  +G AP++  YT+                   
Sbjct: 72  LRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFV 131

Query: 224 ---MKCCFRNR--------------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
              ++ C R                  +  + + + M+  G   D   Y T++      G
Sbjct: 132 LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAG 191

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           R +EA   +   + +G + ++V YN LI+ YC  G LE A  + + M+  G   +  T+T
Sbjct: 192 RTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYT 251

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            LI G CK+  +  A +    M   G   N+  Y  ++     DG++D A  + +SME  
Sbjct: 252 ELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS 311

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             V + +T S ++  LCK +R+  A  LL S ++ G+++ +    +++DGL  +G
Sbjct: 312 GLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 4/162 (2%)

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME   +     ++ +Y TLIN YC  G L A+   L  + + GF  D + +T  + G C+
Sbjct: 60  MESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCR 119

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AG +  A      M   G       Y  ++  L   G +  A++VF  M+      D   
Sbjct: 120 AGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHV 179

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           Y++MVH LC A R   A  LL   +  G         A++DG
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/191 (19%), Positives = 78/191 (40%), Gaps = 35/191 (18%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + C+ +RL++A+ ++I+                                   M
Sbjct: 580 IYNCFLTSLCRVDRLDEAKILLIE-----------------------------------M 604

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           + A ++P    Y S+IA   R  +L+ +L  +D M++ G  P + SY  ++  L + G  
Sbjct: 605 QSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSI 664

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A +VF DM+  +       + I+++GL +  Y      +   +++  + P    Y  L
Sbjct: 665 QTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724

Query: 189 IKGLCKAGRLR 199
              +  A  ++
Sbjct: 725 TGKITDANDIQ 735


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 201/416 (48%), Gaps = 11/416 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CK   ++KA  ++   ++ GV+P+  TY  ++  YC           L ++R  G+
Sbjct: 238 IAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGV 297

Query: 74  -----SPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
                 PD+ TY +L+ G AT+ +L+     LLD M+  GI PD + YN L+    + GK
Sbjct: 298 EPDGLEPDIATYCTLLQGYATKGALVGMHA-LLDLMVRNGIHPDHYVYNILICAYAKQGK 356

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA  VF  M    L P   T+  ++  LCK+   ++A+  F  +   G  P  + YN 
Sbjct: 357 VDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 416

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLC   +   A  ++ E+ D G   N I + +I+    +  +     ++   M R G
Sbjct: 417 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 476

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y T+I  +   G++ EA   +  MV+ G++ + V+Y TLIN YCK  ++  A 
Sbjct: 477 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDAL 536

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +L  EME  G   D  T+ I++ GL +      A+     + + G    L  YN I+  L
Sbjct: 537 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 596

Query: 368 GKDGKIDHAINVFES---MEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            K+   D A+ +F++   M++K ++ T++ M+  L K  R   A  L ++   +G+
Sbjct: 597 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGL 652



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 224/478 (46%), Gaps = 51/478 (10%)

Query: 17  FCKANRLEKA---EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG--YTILNRMREA 71
            C  NR ++A     ++ DG   G  PDVV+Y  +I+ +  F   D+G  Y+  + M + 
Sbjct: 168 LCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGF--FKEGDSGKAYSTYHEMLDR 225

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            ISPDVVTY+S+IA   +   +  ++++L  M++ G+ P+  +Y S+MH     G+P EA
Sbjct: 226 RISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEA 285

Query: 132 ----NRVFQDMICGD-LTPCTATF-----------------------------------N 151
                +V  D +  D L P  AT+                                   N
Sbjct: 286 IGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYN 345

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I++    K    D A+ +F  +++ G  P+ VTY  +I  LCK+GR+  A    +++ D 
Sbjct: 346 ILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 405

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G +P  I Y +++       K++   E++  M  +G   +   + ++I +  K GR+ E+
Sbjct: 406 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 465

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
               + MV  GV+ DI++Y+TLI+ YC  GK++ A  LL  M   G + +  T+  LI+G
Sbjct: 466 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLING 525

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKD 387
            CK   +  A +  + M   G   ++  YN I+  L +  +   A    + + ES    +
Sbjct: 526 YCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 585

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             TY+ ++H LCK K    A ++  +     +++       ++D L   G   EAK +
Sbjct: 586 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 212/430 (49%), Gaps = 17/430 (3%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A+RL+   A + + ++ G   + +T+  L+   C    + DA   +L RM E    PD
Sbjct: 98  CRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPD 157

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           V +   L+ G    +    +L+L   M +    G  PDV SY ++++  F+ G   +A  
Sbjct: 158 VFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYS 217

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            + +M+   ++P   T++ ++  LCK +  D A+ +   + K+G +P   TY  ++ G C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYC 277

Query: 194 KAGRLRTARWILKELGDSGHAPNAI-----TYTTIMKCCFRNRKYKLGLE-ILSAMKRKG 247
            +G+ + A   LK++   G  P+ +     TY T+++  +  +   +G+  +L  M R G
Sbjct: 278 SSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQ-GYATKGALVGMHALLDLMVRNG 336

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  +I A+ K G++ EA     +M   G+  D V+Y  +I + CK G++E A 
Sbjct: 337 IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAM 396

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDR 366
           L  ++M  +G       +  LI GLC     + A  L LE +++ G   N   +N I+D 
Sbjct: 397 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDS 455

Query: 367 LGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K+G++  +  +F+ M    VK D  TYS+++   C A ++  A KLL   +  G++  
Sbjct: 456 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515

Query: 423 KSAQKAVVDG 432
               + +++G
Sbjct: 516 TVTYRTLING 525



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 1/315 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  + + CK  R+ ++E +    +R+GV PD++TY+ LID YC     D    +
Sbjct: 444 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL 503

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L+ M   G+ P+ VTY +LI G  + S +  +L L  EM   G+ PD+ +YN ++  LFQ
Sbjct: 504 LSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQ 563

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +   A  ++  +         +T+NI+L+GLCKN+ TD+ALRMF+ L       E  T
Sbjct: 564 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEART 623

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +NI+I  L K GR   A+ +      +G  PN  TY  + +        +   ++  +M+
Sbjct: 624 FNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 683

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D      ++   ++ G +  A  Y+  +      L+  + +  I+L    GK +
Sbjct: 684 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQ 742

Query: 305 AAYLLLDEMEKQGFE 319
             +  L E  K   E
Sbjct: 743 EYHRFLPEKYKSFIE 757



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 183/391 (46%), Gaps = 43/391 (10%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R G+ PD   YN+LI AY +    D    + ++MR+ G++PD VTY ++I    ++  +
Sbjct: 333 VRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRV 392

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M++ G+ P    YNSL+H L    K + A  +  +M+   +   T  FN +
Sbjct: 393 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 452

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      + ++F  + + G  P+++TY+ LI G C AG++  A  +L  +   G 
Sbjct: 453 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL 512

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY T++                             GYC       KI R+ +A  
Sbjct: 513 KPNTVTYRTLIN----------------------------GYC-------KISRMGDALV 537

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M + GV  DI++YN ++    +  +  AA  L   + + G + +  T+ I++ GLC
Sbjct: 538 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 597

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKD 387
           K   +    L + + N    D  LEA  +N ++D L K G+   A ++F +      V +
Sbjct: 598 K-NKLTDDALRM-FQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPN 655

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +TY  M  N+     L    +L LS   +G
Sbjct: 656 YWTYRLMAENIIGQGLLEELDQLFLSMEDNG 686



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 14/386 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +C + K  ++++A  +     + G+ PD VTY  +I   C+    +       +M +
Sbjct: 345 NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMID 404

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP  + YNSLI G    +    + +L+ EML+ GI  +   +NS++    + G+  E
Sbjct: 405 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 464

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           + ++F  M+   + P   T++ +++G C     D A+++  G+   G  P  VTY  LI 
Sbjct: 465 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLIN 524

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK  R+  A  + KE+  SG +P+ ITY  I++  F+ R+     E+   +   G   
Sbjct: 525 GYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 584

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  ++    K     +A    + +    ++L+  ++N +I+   K G+   A  L 
Sbjct: 585 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLF 644

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
                 G   + +T+ ++      A NI G  L LE ++++    ++E   C VD     
Sbjct: 645 VAFSSNGLVPNYWTYRLM------AENIIGQGL-LEELDQLFL--SMEDNGCTVD----S 691

Query: 371 GKIDHAI-NVFESMEVKDSFTYSSMV 395
           G ++  +  + +  E+  + TY SM+
Sbjct: 692 GMLNFIVRELLQRGEITRAGTYLSMI 717



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 160/407 (39%), Gaps = 87/407 (21%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIMLN 155
           + DE+L  G    ++  N  +  + +   P  A   +  M     G +TP   T+ I++ 
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILIG 95

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI----------- 204
             C+    D        + K GF  E +T+  L+KGLC   R   A  I           
Sbjct: 96  CCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 205 ---------LKELGDS-------------------GHAPNAITYTTIMKCCFRN----RK 232
                    LK L D                    G AP+ ++YTT++   F+     + 
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKA 215

Query: 233 YKL-------------------------------GLEILSAMKRKGYTFDGFGYCTVIAA 261
           Y                                  +E+L++M + G   +   Y +++  
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHG 275

Query: 262 FVKIGRLKEATDYMEQMVTDGV-----QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +   G+ KEA  +++++ +DGV     + DI +Y TL+  Y  +G L   + LLD M + 
Sbjct: 276 YCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRN 335

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D Y + ILI    K G +  A L    M + G + +   Y  ++  L K G+++ A
Sbjct: 336 GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDA 395

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  FE M        +  Y+S++H LC   +   A +L+L  L  G+
Sbjct: 396 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 37/241 (15%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P   TY  ++ CC R  +  LG   L  + +KG+  +   +  ++       R  +A D 
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGK----LEAAYLLLDEMEKQGFECDKYTHTILI 329
           + + +T+     D+ S   L+   C E +    LE  +++ D     G   D  ++T +I
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADG-RGGGSAPDVVSYTTVI 203

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
           +G  K G+   A                  Y+ ++DR     +I             D  
Sbjct: 204 NGFFKEGDSGKA---------------YSTYHEMLDR-----RIS-----------PDVV 232

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TYSS++  LCK + +  A ++L S +K+GV        +++ G   SG  +EA     K+
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKV 292

Query: 450 R 450
           R
Sbjct: 293 R 293


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 205/444 (46%), Gaps = 7/444 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R+E A  +  +   +   PDVVTY +LI  YC     +    +L+ M  
Sbjct: 266 NILLKVLCGAGRVEDARQLFDE---MASPPDVVTYGILIHGYCALGELENAVKLLDDMVA 322

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+   Y S++A       +S +L ++++M+   +  D   Y +++      G    
Sbjct: 323 RGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVS 382

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R F +M    L     T+  ++NGLC+      A ++ + +       + VTY +L+ 
Sbjct: 383 ARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVD 442

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A  +   +   G APN +TYT +     +    +   E+L  M  KG   
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL 502

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y ++I    K G L +A   M  M   G++ D+ +Y TLI+  CK G+L+ A+ LL
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM   G +    T+ +L++G C +G ++G +  LE+M +     N   YN ++ +    
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +     +++ M  +    +  TY+ ++   CKA+ +  A       ++ G R+  S+ 
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
            A++  L       EA+K+   +R
Sbjct: 683 SALIRLLNKKKKFVEARKLFHDMR 706



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 21/389 (5%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM--GIP-PDVWSYNSLMH 120
           +L R+R+ GISP     N++++              LDE +E+  G+P  +V SYN L+ 
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLP-----------LDEAIELFQGLPDKNVCSYNILLK 270

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L   G+ ++A ++F +M      P   T+ I+++G C     +NA+++   +   G  P
Sbjct: 271 VLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
               Y  ++  LC  GR+  A  +++++       +   YTT++                
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+RKG   DG  Y T+I    + G LKEA   +++M+   + +D V+Y  L++ YCK 
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK+  A+ + + M ++G   +  T+T L DGLCK G+++ A   L  M+  G + N   Y
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTY 507

Query: 361 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N +++ L K G +D A+     M+      D +TY++++  LCK+  L  A  LL   L 
Sbjct: 508 NSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD 567

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +G++        +++G   SG     KK+
Sbjct: 568 NGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 158/314 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A  L++AE ++ + +   +  D VTY +L+D YC+       + + N M + G++P+
Sbjct: 409 LCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPN 468

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +L  G  +   +  + +LL EM   G+  +  +YNSL++ L + G  D+A R   
Sbjct: 469 VVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMA 528

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM    L P   T+  +++ LCK+   D A  + + +  +G  P +VTYN+L+ G C +G
Sbjct: 529 DMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSG 588

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+   + +L+ + +    PNA TY ++MK        K   EI   M  +    +   Y 
Sbjct: 589 RVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYN 648

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K   +KEA  +  +M+  G +L   SY+ LI L  K+ K   A  L  +M K+
Sbjct: 649 ILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKE 708

Query: 317 GFECDKYTHTILID 330
           GF  +   +   ID
Sbjct: 709 GFTAEPDVYNFYID 722



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L  A     +  R G+  D VTY  LI+  C+         +L  M    +  D
Sbjct: 374 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY  L+ G  +   ++ +  + + M++ G+ P+V +Y +L   L + G    AN +  
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLH 493

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L     T+N ++NGLCK  Y D A+R    +   G  P++ TY  LI  LCK+G
Sbjct: 494 EMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  +L+E+ D+G  P  +TY  +M     + + + G ++L  M  K    +   Y 
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           +++  +     +K  T+  + M +  V+ +  +YN LI  +CK   ++ A    +EM ++
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           GF     +++ LI  L K      AR     M K GF +  + YN  +D
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 138/302 (45%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V  +CK  ++ +A  +    ++ GV P+VVTY  L D  C+     A   +L+ M   
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+  +  TYNSLI G  +   L  ++  + +M   G+ PDV++Y +L+  L + G+ D A
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           + + Q+M+   + P   T+N+++NG C +   +   ++   + +    P   TYN L+K 
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C    +++   I K +      PN  TY  ++K   + R  K      + M  KG+   
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLT 678

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I    K  +  EA      M  +G   +   YN  I+    E  LEA   L D
Sbjct: 679 ASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCD 738

Query: 312 EM 313
           E+
Sbjct: 739 EL 740



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 15/314 (4%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           ++P     N +L+ L      D A+ +F+GL        + +YNIL+K LC AGR+  AR
Sbjct: 231 ISPSPEACNAVLSRLP----LDEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDAR 282

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  E+      P+ +TY  ++       + +  +++L  M  +G   +   Y +V+A  
Sbjct: 283 QLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALL 339

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
              GR+ +A   +E MV   V LD   Y T+++ +C +G L +A    DEM+++G   D 
Sbjct: 340 CDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 399

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+T LI+GLC+AG +K A   L+ M     D +   Y  +VD   K GK+  A  V  +
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M  +    +  TY+++   LCK   + +A++LL      G+ +      ++++GL  +G 
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519

Query: 439 RREAKKIQSKIRMA 452
             +A +  + +  A
Sbjct: 520 LDQAMRTMADMDAA 533



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 11/229 (4%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +  ++S + L +  CT+       CKA  L++A   + D    G+ PDV TY  LIDA C
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +    D  + +L  M + GI P +VTYN L+ G   +  +     LL+ MLE  I P+  
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610

Query: 114 SYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           +YNSLM  +C+    K      +++ M   ++ P   T+NI++ G CK R    A     
Sbjct: 611 TYNSLMKQYCIGNNMK--STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHN 668

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            + + GF     +Y+ LI+ L K  +   AR +  ++   G       Y
Sbjct: 669 EMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVY 717


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 185/364 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  +L +A  +  + +  G+  +V+TYN LI A C+F  +       ++M   GI PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+ +LI   ++   +  +  + + M++ G  P++ +YNSL++ L    + D A R+F+
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   +     ++N ++NG C +  T+ A+ +FR +Q     P + TY IL+K L + G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+RTA+ +   +   G +P+  TYT ++    +N   +  +++  ++K   Y      Y 
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    +  R + A +  +++ T G+  +IV+YN +IN  CKEGKL  A  L  +ME+ 
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G E D+ +   +I G  +   ++ A   L+ M +  F  N      +V+    D +    
Sbjct: 424 GCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSEL 483

Query: 377 INVF 380
            N F
Sbjct: 484 PNNF 487



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 39/415 (9%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           ++G  P++VT ++L+ G      +  +L+L D+M   G   D+  Y  L++ L +  +  
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  + + M+    +    T+ ++++ LCK+      L+MFR +   G  P ++ Y+ LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+ G+LR A  +  E+   G   N ITY +++    R   +K      S M  +G  
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 250 FDGFGYCTVIAAFVKIGRLKEA-----------------------------------TDY 274
            D   + T+I    K G+++EA                                      
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E MV  G+++D++SYNTLIN YC  GK E A  L  +M+ +       T+TIL+  L +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---ESMEVKDSF-T 390
            G I+ A+     M   G   +L+ Y  ++D L K+G I+ AI+VF   +S++ K S   
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           YS ++  + +A+R  SA ++       G+         +++GL   G   EA+++
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 191/419 (45%), Gaps = 39/419 (9%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           +  TY ++ID+ C+      G  +   M   GI P+V+ Y+SLI G  R   L  +++L 
Sbjct: 78  NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLF 137

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           DEM+  GI  +V +YNSL+H   + G   EA R F  M+   + P   TF  +++ L K 
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKK 197

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A ++F  + K G  P +VTYN L+ GLC   ++  A  + + + + G   + I+Y
Sbjct: 198 GKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISY 257

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T++                             GYCT        G+ +EA     +M  
Sbjct: 258 NTLIN----------------------------GYCTS-------GKTEEAMTLFRKMQY 282

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           + +   I +Y  L+    + G++  A  L + M+  G      T+T+L+DGLCK G I+ 
Sbjct: 283 EELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEE 342

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A      +  I +  ++  Y+ ++  + +  + + A+ +F+ +     V +  TY+ M++
Sbjct: 343 AIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMIN 402

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            LCK  +L  A +L +   +SG    + +   ++ G       ++A +   ++R    S
Sbjct: 403 GLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFS 461



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 140/285 (49%), Gaps = 4/285 (1%)

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           K G+ P LVT + L+KG+C  G++  A  +  ++  SG   + + Y  ++    + R+ +
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             +E+   M  +  + + F Y  VI +  K G   +      +M+  G+  +++ Y++LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  C+ GKL  A  L DEM  QG + +  T+  LI   C+ G  K A      M   G  
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            ++  +  ++D L K GK+  A  +FE M    E  +  TY+S+++ LC   ++  A +L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               ++ G++I   +   +++G   SG   EA  +  K++  +++
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT 286


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 28/424 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P    +N L+ AYC        Y +L +M + G  P  V YN LI G+      S +
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLN 384

Query: 97  LDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
            DLLD       EML  G+  +  + +S   CL   GK ++A  V ++MI     P T+T
Sbjct: 385 FDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 444

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           ++ +LN LC     + A  +F  +++ G V ++ TY I++   CKAG +  AR    E+ 
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 504

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G  PN +TYT ++    + +K     E+   M  +G   +   Y  +I    K G+++
Sbjct: 505 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 564

Query: 270 EATDYMEQM-----VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +A    E+M     V D             + ++V+Y  L++ +CK  ++E A  LLD M
Sbjct: 565 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 624

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G E ++  +  LIDGLCK G +  A+     M++ GF + L  Y+ ++DR  K  + 
Sbjct: 625 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 684

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  V   M       +   Y+ M+  LCK  +   A KL+    + G +       A+
Sbjct: 685 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 744

Query: 430 VDGL 433
           +DG 
Sbjct: 745 IDGF 748



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 16/393 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + EKA ++I + I  G +PD  TY+ +++  C     +  + +   M+  G+  D
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  ++    +  L+  +    +EM E+G  P+V +Y +L+H   +  K   AN +F+
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL-------------- 182
            M+     P   T++ +++G CK    + A ++F  +     VP++              
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596

Query: 183 --VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             VTY  L+ G CK+ R+  AR +L  +   G  PN I Y  ++    +  K     E+ 
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M   G+    + Y ++I  + K+ R   A+  + +M+ +    ++V Y  +I+  CK 
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 716

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK + AY L+  ME++G + +  T+T +IDG    G I+     LE M   G   N   Y
Sbjct: 717 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 776

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
             ++D   K+G +D A N+ E M+     T+++
Sbjct: 777 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 193/448 (43%), Gaps = 58/448 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I V +FCKA  +E+A     +   +G  P+VVTY  LI AY +         +   M  
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++VTY++LI G  +   +  +  + + M      PDV  Y               
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY--------------- 585

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               F+        P   T+  +L+G CK+   + A ++   +   G  P  + Y+ LI 
Sbjct: 586 ----FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 641

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G+L  A+ +  E+ + G      TY++++   F+ ++  L  ++LS M       
Sbjct: 642 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 701

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I    K+G+  EA   M+ M   G Q ++V+Y  +I+ +   GK+E    LL
Sbjct: 702 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 761

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM---------------------- 348
           + M  +G   +  T+ +LID  CK G +  A   LE M                      
Sbjct: 762 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 821

Query: 349 --------NKIGFDSN---LEAYNCIVDRLGKDGKIDHAINVFESME------VKDSFTY 391
                   ++IG D     L  Y  ++D L K  +++ A+ + E +       V  S TY
Sbjct: 822 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 881

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +S++ +LC A ++ +A +L     K GV
Sbjct: 882 NSLIESLCLANKVETAFQLFSEMTKKGV 909



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 201/441 (45%), Gaps = 26/441 (5%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK  +  +A  ++        +PD V Y  LI   C+   F+     LNRMR     P
Sbjct: 238 SLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY++L+ G      L     +L+ M+  G  P    +NSL+H     G    A ++ 
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354

Query: 136 QDMI-CGDLTPCTATFNIMLNGLCKNRYT------DNALRMFRGLQKHGFVPELVTYNIL 188
           + M+ CG + P    +NI++  +C ++ +      D A + +  +   G V   +  +  
Sbjct: 355 KKMVKCGHM-PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSF 413

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            + LC AG+   A  +++E+   G  P+  TY+ ++       K +L   +   MKR G 
Sbjct: 414 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 473

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + Y  ++ +F K G +++A  +  +M   G   ++V+Y  LI+ Y K  K+  A  
Sbjct: 474 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 533

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L + M  +G   +  T++ LIDG CKAG ++ A    E M       +++ Y    D   
Sbjct: 534 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD--- 590

Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
                       ++ E  +  TY +++   CK+ R+  A KLL +    G    +    A
Sbjct: 591 ------------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 638

Query: 429 VVDGLRHSGCRREAKKIQSKI 449
           ++DGL   G   EA+++++++
Sbjct: 639 LIDGLCKVGKLDEAQEVKTEM 659



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 4/340 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTY  L+D +C+    +    +L+ M   G  P+ + Y++LI G  +   L  + ++
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM E G P  +++Y+SL+   F++ + D A++V   M+     P    +  M++GLCK
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 715

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              TD A ++ + +++ G  P +VTY  +I G    G++ T   +L+ +G  G APN +T
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++  C +N    +   +L  MK+  +     GY  VI  F K     E+   ++++ 
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 833

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI--LIDGLCKAGN 337
            D     +  Y  LI+   K  +LE A  LL+E+         Y+ T   LI+ LC A  
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 893

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           ++ A      M K G    ++++  ++  L ++ KI  A+
Sbjct: 894 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 193/431 (44%), Gaps = 20/431 (4%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L+ AE    + +  GV+ + +  +      C    ++  ++++  M   G  PD  TY+ 
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 447

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++      S +  +  L +EM   G+  DV++Y  ++    + G  ++A + F +M    
Sbjct: 448 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
            TP   T+  +++   K +    A  +F  +   G +P +VTY+ LI G CKAG++  A 
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567

Query: 203 WIL----------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            I                 K+  D+   PN +TY  ++    ++ + +   ++L AM  +
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I    K+G+L EA +   +M   G    + +Y++LI+ Y K  + + A
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 687

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +L +M +     +   +T +IDGLCK G    A   ++ M + G   N+  Y  ++D 
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 747

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            G  GKI+  + + E M  K    +  TY  ++ + CK   L  A  LL    ++     
Sbjct: 748 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 807

Query: 423 KSAQKAVVDGL 433
            +  + V++G 
Sbjct: 808 TAGYRKVIEGF 818



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 175/412 (42%), Gaps = 50/412 (12%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+L+  +C+  SF      L R+++    P   TYN LI    +   L  +  +  EM  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             +  D ++     + L ++GK  EA  + +     +  P T  +  +++GLC+    + 
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 279

Query: 166 ALRMFRGLQKHGFVPELVTY-----------------------------------NILIK 190
           A+     ++    +P +VTY                                   N L+ 
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL-------SAM 243
             C +G    A  +LK++   GH P  + Y  ++     ++   L  ++L       S M
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD-SLNFDLLDLAEKAYSEM 398

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   +     +        G+ ++A   + +M+  G   D  +Y+ ++N  C   K+
Sbjct: 399 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 458

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A+LL +EM++ G   D YT+TI++D  CKAG I+ AR     M ++G   N+  Y  +
Sbjct: 459 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 518

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K  K+ +A  +FE+M     + +  TYS+++   CKA ++  A ++ 
Sbjct: 519 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 570



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 9/269 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R + A  ++   +     P+VV Y  +ID  C+    D  Y ++  M E G  P+
Sbjct: 678 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 737

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLFQLGKPDEANRVF 135
           VVTY ++I G      +   L+LL+ M   G+ P+  +Y  L+ HC  + G  D A+ + 
Sbjct: 738 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC-KNGALDVAHNLL 796

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M        TA +  ++ G   N+    +L +   + +    P L  Y +LI  L KA
Sbjct: 797 EEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 854

Query: 196 GRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            RL  A  +L+E+    +     + TY ++++      K +   ++ S M +KG   +  
Sbjct: 855 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 914

Query: 254 GYCTVIAAFVKIGRLKEA---TDYMEQMV 279
            +C++I    +  ++ EA    D++  MV
Sbjct: 915 SFCSLIKGLFRNSKISEALLLLDFISHMV 943



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 4/297 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +L++A+ +  +    G    + TY+ LID Y +    D    +L++M E   +P+
Sbjct: 643 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 702

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  +I G  +      +  L+  M E G  P+V +Y +++     +GK +    + +
Sbjct: 703 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 762

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+ ++++  CKN   D A  +   +++  +      Y  +I+G  K  
Sbjct: 763 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-- 820

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-- 254
               +  +L E+G    AP    Y  ++    + ++ ++ L +L  +     T   +   
Sbjct: 821 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 880

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
           Y ++I +     +++ A     +M   GV  ++ S+ +LI    +  K+  A LLLD
Sbjct: 881 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 124/342 (36%), Gaps = 87/342 (25%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
            N+++   C+N     AL     L+   F P   TYN LI+   KA RL +A  I +E+ 
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
            +    +  T       CF     K+G   E L+ ++ + +  D   Y  +I+   +   
Sbjct: 222 LANLRMDGFTLR-----CFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL 276

Query: 268 LKEATDYMEQMVTDGVQLDIVSY-----------------------------------NT 292
            +EA D++ +M       ++V+Y                                   N+
Sbjct: 277 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 336

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG--------------------- 331
           L++ YC  G    AY LL +M K G       + ILI                       
Sbjct: 337 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYS 396

Query: 332 --------------------LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
                               LC AG  + A   +  M   GF  +   Y+ +++ L    
Sbjct: 397 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 456

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
           K++ A  +FE M+    V D +TY+ MV + CKA  +  A K
Sbjct: 457 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 498



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 19  KANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           KA RLE A  ++  +      ++    TYN LI++ C     +  + + + M + G+ P+
Sbjct: 853 KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 912

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
           + ++ SLI G  RNS +S +L LLD +  M  P
Sbjct: 913 MQSFCSLIKGLFRNSKISEALLLLDFISHMVCP 945


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 217/458 (47%), Gaps = 21/458 (4%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FCK   ++ A++     I+ G+LPDV +YN+L+   C   S +      N M 
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGK 127
             G+ PD+VTYN L  G     L+S +  ++  ML  G+ PD+ +Y  L+  HC  Q+G 
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC--QMGN 390

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +E+ ++ + M+   L     T+ ++L+ LCK+   D A+ +   ++  G  P+L+TY+ 
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS- 449

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
                   G +  A  + +E+      PN+   + I+   F             ++ +  
Sbjct: 450 -------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 502

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              +   Y  +I  + K+G + EA    +Q++  G+   IV++N+LI  +CK+GKL  A 
Sbjct: 503 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 562

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LLD ++  G      T+T L++G C+ G++      L  M           Y  +V  L
Sbjct: 563 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 622

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K+G++  ++ + + M  +    D  TY++++ + CKA  L  A +L    L+  ++   
Sbjct: 623 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 682

Query: 424 SAQKAVVDGLRHSGCRREAKKI-----QSKIRMAKISH 456
                +++GL   G  ++A ++        IR+ K+++
Sbjct: 683 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAY 720



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 196/417 (47%), Gaps = 22/417 (5%)

Query: 12  ICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I +C  C+   +E++    E ++  G++L +    VTY +L+ + C+    D    +L+ 
Sbjct: 380 ILICGHCQMGNIEESFKLKEKMLSQGLKLSI----VTYTVLLSSLCKSGRIDEAVILLHE 435

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G+ PD++TY+    GA   ++     +L +EM    I P+ +  ++++  LF+ G 
Sbjct: 436 MEVIGLKPDLLTYSR---GAVEEAI-----ELYEEMCSKRIYPNSFVCSAIISGLFEKGA 487

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA   F  +   D+      +NIM++G  K      A+R ++ + + G  P +VT+N 
Sbjct: 488 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 547

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CK G+L  A  +L  +   G  P ++TYTT+M             ++L  M+ K 
Sbjct: 548 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 607

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  V+    K GRL E+   ++ M   G+  D ++YNT+I  +CK   L+ A+
Sbjct: 608 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 667

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L ++M +   +    T+ +LI+GLC  GN+K A   L  +          AY  I+   
Sbjct: 668 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 727

Query: 368 GKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              G + +A+  F  M V+  F      YS++++ LCK   +  A       L  G+
Sbjct: 728 CAKGDVQNALVFFHQM-VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 783



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 179/373 (47%), Gaps = 8/373 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS     + + + CK+ R+++A  ++ +   +G+ PD++TY+          + +    
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIE 458

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I P+    +++I+G      +S +    D + +  +  ++  YN ++    
Sbjct: 459 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 518

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG   EA R ++ +I   ++P   TFN ++ G CK      A+++   ++ HG VP  V
Sbjct: 519 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 578

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+ G C+ G + +   +L E+      P  ITYT ++K   +  +    +++L  M
Sbjct: 579 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 638

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D   Y TVI +F K   L++A     QM+   +Q   V+YN LIN  C  G L
Sbjct: 639 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNL 698

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  LL  ++ Q     K  +T +I   C  G+++ A +    M + GF+ ++  Y+ +
Sbjct: 699 KDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAV 758

Query: 364 VDRLGKDGKIDHA 376
           ++RL K   I  A
Sbjct: 759 INRLCKRNLITDA 771



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 194/415 (46%), Gaps = 23/415 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + ++  C + +A  +  A  ++     L +   + TYN L+         D  + +
Sbjct: 166 LNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDV 222

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            N ++ +G+  +  T   LI G  R S L  ++  L E       P V S+N+LM    +
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G  D A   F  MI   L P   ++NI+L+GLC     + AL     ++ HG  P++VT
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM--KCCFRN--RKYKLGLEIL 240
           YNIL  G    G +  A  +++ +  +G  P+ +TYT ++   C   N    +KL  ++L
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S    +G       Y  ++++  K GR+ EA   + +M   G++ D+++Y+         
Sbjct: 403 S----QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------R 450

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G +E A  L +EM  +    + +  + +I GL + G I  A+++ + + K      +  Y
Sbjct: 451 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 510

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N ++D   K G I  A+  ++ +  K       T++S+++  CK  +L  A KLL
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 565



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 133/310 (42%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L NI +  + K   + +A       I  G+ P +VT+N LI  +C+         +L+ +
Sbjct: 509 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 568

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  G+ P  VTY +L+ G      +    D+L EM    I P   +Y  ++  L + G+ 
Sbjct: 569 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 628

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++ + M    L P   T+N ++   CK      A ++   + +H   P  VTYN+L
Sbjct: 629 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 688

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC  G L+ A  +L  L D       + YTTI+K        +  L     M  +G+
Sbjct: 689 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 748

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 Y  VI    K   + +A  +   M+T G+  D      ++N + + G   + + 
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 808

Query: 309 LLDEMEKQGF 318
           +   M K G 
Sbjct: 809 IFAMMIKCGL 818



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 78/170 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +FCKA+ L+KA  +    ++  + P  VTYN+LI+  C + +      +L  +++
Sbjct: 651 NTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQD 710

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I    V Y ++I        +  +L    +M+E G    +  Y+++++ L +     +
Sbjct: 711 QSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITD 770

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           A   F  M+   + P      +MLN   ++   ++   +F  + K G +P
Sbjct: 771 AKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 220/485 (45%), Gaps = 39/485 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +A R   A  +  +     VLP+ +TYN +ID + +    +AG+++ ++M  
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL------------ 118
            G+ P+ +TYN L++G  R   +  +  LLDEM    + PD ++Y+ L            
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319

Query: 119 MHCLF-----------------------QLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           M  LF                       + GK   A  V Q ++   L P    +N ++N
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C+    + A   F  ++     P+ +TYN LI GLCKA R+  A+ +L E+ D+G  P
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 439

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
              T+ T++    R  + +    +LS M+  G   +   Y +++ AF K G++ EA   +
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M    V  +   YN +I+ Y + G  + A++L+++M+  G      T+ +LI GLC  
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 559

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TY 391
             I  A   +  ++      +  +YN ++      G ID A+++ + M    +K +  TY
Sbjct: 560 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 619

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             ++  L  A RL     L    +++ V    +    +V+     G   +A+ ++ ++  
Sbjct: 620 HQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679

Query: 452 AKISH 456
            + +H
Sbjct: 680 KRNNH 684



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 183/393 (46%), Gaps = 5/393 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI-PPDVWSYNSLMHCLFQLG 126
           +  AG  PD   +N  +        L  ++ +L  M   G  PP+ +SYN ++  +++ G
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  VF +M    + P   T+N M++G  K    +    +   +  HG  P  +TYN
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +L+ GLC+AGR+     +L E+      P+  TY+ +     RN   K  L +     + 
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN 330

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T   +    ++    K G++  A + ++ +V  G+    V YNTLIN YC+ G+LE A
Sbjct: 331 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGA 390

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +    +M+ +  + D  T+  LI+GLCKA  I  A+  L  M   G +  +E +N ++D 
Sbjct: 391 FSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 450

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
            G+ G+++    V   M+      +  +Y S+V+  CK  ++P A  +L       V   
Sbjct: 451 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 510

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                A++D     G   +A  +  K++   IS
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 543



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 182/417 (43%), Gaps = 40/417 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC 95
           G  PD   +N  + A            +L RM R+    P+  +YN +IAG  R      
Sbjct: 155 GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 214

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++++ DEM E  + P+  +YN+++    + G  +    +   M+C  L P   T+N++L+
Sbjct: 215 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS 274

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTY------------------------------ 185
           GLC+         +   +     VP+  TY                              
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334

Query: 186 -----NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
                +IL+ GLCK G++  A  +L+ L ++G  P  + Y T++    +  + +      
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             MK +    D   Y  +I    K  R+  A D + +M  +GV   + ++NTLI+ Y + 
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+LE  +++L EM++ G + +  ++  +++  CK G I  A   L+ M       N + Y
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 361 NCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLS 413
           N I+D   + G  D A  + E M+   +  S  TY+ ++  LC   ++  A +++ S
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINS 571



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 5/333 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P + S N L+  L  LG+  +  R F  +      P T  +N  +           A+ M
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182

Query: 170 FRGLQKHGFVPE-LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
            R + + G  P    +YN++I G+ +AGR   A  +  E+ +    PN ITY T++    
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +    + G  +   M   G   +   Y  +++   + GR+ E +  +++M +  +  D  
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y+ L +   + G  +A   L  +  K G     YT +IL++GLCK G +  A   L+ +
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
              G       YN +++   + G+++ A + F  M+ +    D  TY+++++ LCKA+R+
Sbjct: 363 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +A  LL+    +GV         ++D    +G
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 222/445 (49%), Gaps = 11/445 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+N+++KA  ++   I  G++PD  +Y  L++  C+  +      ++ +M E G   +
Sbjct: 107 LCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTN 166

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYNSL+ G  ++  L+ SL LLD+++  G+ P+ ++++ L+   ++    DEA ++  
Sbjct: 167 TVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLD 226

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            +I     P   ++N++L GLCK   T+ A++ FR L   GF P +V+ NI+++ LC  G
Sbjct: 227 GIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEG 286

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  ++ E+     +P+ +TY  ++     + + +   ++L  M R  +      + 
Sbjct: 287 RWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFN 346

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I+   K G+       ++QM+      +  ++N  I + C+ G+++ A+ ++  +   
Sbjct: 347 PIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNA-IAVLCEGGRVQRAFSIIQSL--- 402

Query: 317 GFECDKYTHTI---LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           G + +  TH     +I  LC+ GN   A   L  M + GF  +   Y+ ++  L  +G +
Sbjct: 403 GNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGML 462

Query: 374 DHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A+ +F  +E  D       +++++   CK+ R   + ++    +  G    ++    +
Sbjct: 463 DEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTIL 522

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
           V+G+ H   +  A ++  ++ + ++
Sbjct: 523 VEGIAHEEEKELAAEVLKELYIRQV 547



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 139/284 (48%)

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+ ++  G  PDV     L++ L +  K  +A RV +  I   + P  A++  ++N LCK
Sbjct: 85  LEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCK 144

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A+++   ++++G     VTYN L++GLCK G L  +  +L +L   G  PN  T
Sbjct: 145 RGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFT 204

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           ++ +++  ++ R     +++L  +  KG   +   Y  ++    K GR +EA  +   + 
Sbjct: 205 HSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLP 264

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           + G   ++VS N ++   C EG+ E A  L+ EM+ +       T+ ILI  L   G I+
Sbjct: 265 SKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQ 324

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            A   L+ M +  F  +   +N I+  L K+GK D  +   + M
Sbjct: 325 HAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQM 368



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 172/385 (44%), Gaps = 7/385 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  V   CK   L ++  ++   +R G++P+  T++ L++A  +    D    +L
Sbjct: 166 NTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLL 225

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +   G  P++V+YN L+ G  +      ++    ++   G  P+V S N ++  L   
Sbjct: 226 DGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCE 285

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ +EAN +  +M   + +P   T+NI++  L  +    +A ++   + +  F P   T+
Sbjct: 286 GRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATF 345

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHA---PNAITYTTIMKCCFRNRKYKLGLEILSA 242
           N +I  LCK G+   A  ++K L    H    PN  T+  I   C   R  +    I+ +
Sbjct: 346 NPIISHLCKEGK---ADLVVKCLDQMIHHCCNPNDGTFNAIAVLCEGGRVQR-AFSIIQS 401

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +  K  +     Y  VI++  + G    A   + +M+  G   D  +Y++LI   C EG 
Sbjct: 402 LGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGM 461

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           L+ A  +   +E+  +         LI G CK+G    +    E M   G+  N   Y  
Sbjct: 462 LDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTI 521

Query: 363 IVDRLGKDGKIDHAINVFESMEVKD 387
           +V+ +  + + + A  V + + ++ 
Sbjct: 522 LVEGIAHEEEKELAAEVLKELYIRQ 546



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 129/311 (41%), Gaps = 1/311 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    N+ +   CK  R E+A     D    G  P+VV+ N+++ + C    ++   
Sbjct: 233 GKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEAN 292

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            ++  M     SP +VTYN LI     +  +  +  +LDEM+     P   ++N ++  L
Sbjct: 293 ELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHL 352

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + GK D   +    MI     P   TFN  +  LC+      A  + + L         
Sbjct: 353 CKEGKADLVVKCLDQMIHHCCNPNDGTFN-AIAVLCEGGRVQRAFSIIQSLGNKQNSSTH 411

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             Y  +I  LC+ G    A  +L E+  SG  P+  TY+++++           LEI   
Sbjct: 412 DFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRL 471

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           ++   Y      +  +I  F K GR   + +  E M+  G   +  +Y  L+     E +
Sbjct: 472 LEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEE 531

Query: 303 LEAAYLLLDEM 313
            E A  +L E+
Sbjct: 532 KELAAEVLKEL 542



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A + L+ +   GH P+    T ++    ++ K K    ++      G   D   Y 
Sbjct: 77  RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    K G +  A   +E+M  +G   + V+YN+L+   CK G L  +  LLD++ ++
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +++TH+ L++   K   +  A   L+ +   G   NL +YN ++  L K+G+ + A
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           I  F  +  K    +  + + ++ +LC   R   A++L+
Sbjct: 257 IQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELV 295


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 219/485 (45%), Gaps = 39/485 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    +A R   A  +  +     VLP+ +TYN +ID + +    +AG+ + ++M  
Sbjct: 19  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 78

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL------------ 118
            G+ P+ +TYN L++G  R   +  +  LLDEM    + PD ++Y+ L            
Sbjct: 79  HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 138

Query: 119 MHCLF-----------------------QLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           M  LF                       + GK   A  V Q ++   L P    +N ++N
Sbjct: 139 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 198

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G C+    + A   F  ++     P+ +TYN LI GLCKA R+  A+ +L E+ D+G  P
Sbjct: 199 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 258

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
              T+ T++    R  + +    +LS M+  G   +   Y +++ AF K G++ EA   +
Sbjct: 259 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 318

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M    V  +   YN +I+ Y + G  + A++L+++M+  G      T+ +LI GLC  
Sbjct: 319 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 378

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TY 391
             I  A   +  ++      +  +YN ++      G ID A+++ + M    +K +  TY
Sbjct: 379 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 438

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
             ++  L  A RL     L    +++ V    +    +V+     G   +A+ ++ ++  
Sbjct: 439 HQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498

Query: 452 AKISH 456
            + +H
Sbjct: 499 KRNNH 503



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 4/351 (1%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PP+ +SYN ++  +++ G+  +A  VF +M    + P   T+N M++G  K    +   R
Sbjct: 12  PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +   +  HG  P  +TYN+L+ GLC+AGR+     +L E+      P+  TY+ +     
Sbjct: 72  LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           RN   K  L +     + G T   +    ++    K G++  A + ++ +V  G+    V
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            YNTLIN YC+ G+LE A+    +M+ +  + D  T+  LI+GLCKA  I  A+  L  M
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
              G +  +E +N ++D  G+ G+++    V   M+      +  +Y S+V+  CK  ++
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           P A  +L       V        A++D     G   +A  +  K++   IS
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 362



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 40/390 (10%)

Query: 64  ILNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           +L RM R+    P+  +YN +IAG  R      ++++ DEM E  + P+  +YN+++   
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G  +   R+   M+C  L P   T+N++L+GLC+         +   +     VP+ 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 183 VTY-----------------------------------NILIKGLCKAGRLRTARWILKE 207
            TY                                   +IL+ GLCK G++  A  +L+ 
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           L ++G  P  + Y T++    +  + +        MK +    D   Y  +I    K  R
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           +  A D + +M  +GV   + ++NTLI+ Y + G+LE  +++L EM++ G + +  ++  
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           +++  CK G I  A   L+ M       N + YN I+D   + G  D A  + E M+   
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360

Query: 385 VKDSF-TYSSMVHNLCKAKRLPSASKLLLS 413
           +  S  TY+ ++  LC   ++  A +++ S
Sbjct: 361 ISPSIVTYNLLIKGLCNQSQISEAEEIINS 390


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 215/442 (48%), Gaps = 23/442 (5%)

Query: 26  AEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
           A + + D +  G   PDV T+N L+ A  +  +      +   MREA + PD+VTY  L+
Sbjct: 114 AASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILL 173

Query: 85  AGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEA-----NRVFQD 137
               +  L+  +L +LD M   G  +  D+   N+++  L ++G+  +A      R+ Q 
Sbjct: 174 NRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQV 233

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
             C    P T T+N + +  C+    D A ++   ++K G  P ++T N ++ GLC+ GR
Sbjct: 234 HGCA---PNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGR 290

Query: 198 LRTARWILKE-----LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           +  A    +E     L   G   NA+TY+T++          L +E+   M  +GY  D 
Sbjct: 291 VGAALDFFREKRTTWLEARG---NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDA 347

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I+   + GRL +A +    M   G +LD  +YN LI  +C++ +L  A+ L +E
Sbjct: 348 VMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEE 407

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M+  G + D YT+  L+  LCKAG+       L  M   G   ++  +  +V    K GK
Sbjct: 408 MKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGK 467

Query: 373 IDHAINVFESM-EVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
            D A+ +F SM E +   ++  Y++++  LCK++ +  A KL     ++ V    +   A
Sbjct: 468 TDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNA 527

Query: 429 VVDGLRHSGCRREAKKIQSKIR 450
           ++ GL+      +A ++  +++
Sbjct: 528 LLKGLQDKNMPEKAFELMDQMK 549



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 11/367 (2%)

Query: 99  LLDEMLEMGIP-PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L + L  G P PDV ++NSL+  L + G       +F  M    + P   T+ I+LN L
Sbjct: 117 FLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRL 176

Query: 158 CKNRYTDNALRMFRGLQKHG--FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH-- 213
           CK     +AL++   +   G     ++V  N ++ GLCK GRL+ A   + E     H  
Sbjct: 177 CKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGC 236

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           APN +TY  +   C R     +  +I+  M+++G T +     T++    ++GR+  A D
Sbjct: 237 APNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALD 296

Query: 274 YMEQMVTDGVQL--DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
           +  +  T  ++   + V+Y+TL++ +     +  A  L  EM  QG+  D   +  +I G
Sbjct: 297 FFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISG 356

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           L +AG +  A      M K GF  + +AYN ++    +  ++  A  +FE M+      D
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPD 416

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
            +TY++++  LCKA    +  +LL + +  G +        +V G   +G   EA KI  
Sbjct: 417 VYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFR 476

Query: 448 KIRMAKI 454
            +  A+I
Sbjct: 477 SMGEARI 483



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 39/383 (10%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRL--GVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +LN  V   CK  RL+ A   + + +R   G  P+ VTYN L DA C+    D    I+ 
Sbjct: 205 ILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVE 264

Query: 67  RMREAGISPDVVTYNSLIAGATR--------------------------------NSLLS 94
           RM + G++P+V+T N+++ G  R                                ++ L 
Sbjct: 265 RMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLH 324

Query: 95  C-----SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
           C     +++L  EM + G PPD   Y +++  L Q G+  +A  +   M           
Sbjct: 325 CNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKA 384

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +NI++ G C+ +    A ++F  ++  G  P++ TYN L+  LCKAG       +L  + 
Sbjct: 385 YNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMI 444

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D G  P+ +T+ T++    +  K    L+I  +M       +   Y T+I    K   + 
Sbjct: 445 DDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVD 504

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A    ++M  + V  ++ +YN L+     +   E A+ L+D+M+++    D  T  +L+
Sbjct: 505 VAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564

Query: 330 DGLCKAGNIKGARLHLEYMNKIG 352
           + L + G  +  +  +E  ++ G
Sbjct: 565 EWLPEIGETERLKCFMEQRDEKG 587



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 101/211 (47%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL  +  NI +  FC+  RL +A  +  +    G+ PDV TYN L+   C+   F A   
Sbjct: 379 KLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDE 438

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M + G  P VVT+ +L+ G  +      +L +   M E  I P+   YN+L+  L 
Sbjct: 439 LLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLC 498

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D A ++F +M   ++     T+N +L GL      + A  +   +++    P+ V
Sbjct: 499 KSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYV 558

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           T ++L++ L + G     +  +++  + G A
Sbjct: 559 TMDVLMEWLPEIGETERLKCFMEQRDEKGGA 589


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 184/382 (48%), Gaps = 4/382 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           RL  LP +   N ++D   +       + + + M   G+ P VVTYN+LI        ++
Sbjct: 144 RLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVA 203

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + ++ D+M+   I P+V +Y +++  L + G   +A R+F  M    + P   T+N+++
Sbjct: 204 KAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLM 263

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G C+    ++A+ +++ L K G  P  V +  LI G CKA R   A+ +  E+   G A
Sbjct: 264 SGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVA 323

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P    Y ++M   FR+   +  L +   M R G   D F    V+      G++  A  +
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++ +  DGV L+  +YN LI+ YC+ G LE A      M + G E +  +++ LIDG  K
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSK 443

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G ++ A      M   G + N+  Y  ++    K+G ID A  + + M       ++ T
Sbjct: 444 RGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAIT 503

Query: 391 YSSMVHNLCKAKRLPSASKLLL 412
            S +V  LC+  R+  A + ++
Sbjct: 504 VSVLVDGLCRENRVQEAVRFVM 525



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 180/361 (49%), Gaps = 4/361 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA-GYTILNRMREAGISPDV 77
           KA R   A  +  + +R G++P VVTYN LI+A C+F    A    + ++M    I P+V
Sbjct: 163 KARRPGCAWELFDEMLRRGLVPSVVTYNTLINA-CRFQGTVAKAQEVWDQMVAQQIDPNV 221

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY ++I        +  +  L D M E G+ P+ ++YN LM    Q    + A  ++Q+
Sbjct: 222 VTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQE 281

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           ++   L P    F  +++G CK +    A  MF  + + G  P +  YN L+ G  ++G 
Sbjct: 282 LLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGN 341

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
            + A  + +E+   G  P+  T + +++      +  +    L  ++  G   +   Y  
Sbjct: 342 AQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNA 401

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  + +IG L+EA     +M   G++ ++VSY++LI+ + K GK++ A  +  EM  +G
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461

Query: 318 FECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
            E +  T+T LI G  K G I  A RLH E M + G   N    + +VD L ++ ++  A
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKE-MIENGISPNAITVSVLVDGLCRENRVQEA 520

Query: 377 I 377
           +
Sbjct: 521 V 521



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 196/409 (47%), Gaps = 15/409 (3%)

Query: 47  MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           +L+ A  Q    D    +  R+R     P +   N+++ G  +     C+ +L DEML  
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEMLRR 180

Query: 107 GIPPDVWSYNSLMH-CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           G+ P V +YN+L++ C FQ G   +A  V+  M+   + P   T+  M+  LC+     +
Sbjct: 181 GLVPSVVTYNTLINACRFQ-GTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGD 239

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A R+F  +++ G  P   TYN+L+ G C+   + +A  + +EL  SG  PNA+ +TT++ 
Sbjct: 240 AERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLID 299

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              + +++     +   M R G       Y +++    + G  +EA    ++M   G+  
Sbjct: 300 GFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCP 359

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D  + + ++   C  G++  A   L  +++ G   +   +  LID  C+ GN++ A    
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATC 419

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             M ++G + N+ +Y+ ++D   K GK+  A+ ++  M  K    +  TY++++H   K 
Sbjct: 420 TRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 479

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             + +A +L    +++G+         +VDGL    CR    ++Q  +R
Sbjct: 480 GGIDAAFRLHKEMIENGISPNAITVSVLVDGL----CRE--NRVQEAVR 522



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 21/361 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+ + +  A  +  + ++ G+ P+ V +  LID +C+   F     +   M  
Sbjct: 260 NVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPR 319

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P V  YNSL+ GA R+     +L L  EM  +G+ PD ++ + ++  L   G+   
Sbjct: 320 FGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHV 379

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+R  Q +    +    A +N +++  C+    + AL     + + G  P +V+Y+ LI 
Sbjct: 380 ADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLID 439

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G+++ A  I  E+   G  PN +TYT ++    +N        +   M   G + 
Sbjct: 440 GHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISP 499

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DI------------------VSYN 291
           +      ++    +  R++EA  ++  M   G++  DI                  V Y 
Sbjct: 500 NAITVSVLVDGLCRENRVQEAVRFV--MEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYM 557

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           TLI     +G+   A  L   M K G   D +T+T+LI G C  G +  A +    M KI
Sbjct: 558 TLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 617

Query: 352 G 352
           G
Sbjct: 618 G 618



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 8/292 (2%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           TP  A   +++  L +    D AL +FR L+    +P L   N ++ GL KA R   A  
Sbjct: 117 TPAPA-LGVLVIALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAWE 172

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +  E+   G  P+ +TY T++  C          E+   M  +    +   Y T+I A  
Sbjct: 173 LFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALC 232

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           + G + +A    + M   G+Q +  +YN L++ +C+   + +A +L  E+ K G   +  
Sbjct: 233 EEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAV 292

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             T LIDG CKA     A+     M + G    +  YN ++D   + G    A+ +++ M
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352

Query: 384 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
                  D FT S +V  LC   ++  A + L    + GV +  +A  A++D
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALID 404



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 17/229 (7%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    N  +  +C+   LE+A A       +G+ P+VV+Y+ LID + +         I
Sbjct: 394 LNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAI 453

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M   GI P+VVTY +LI G  +N  +  +  L  EM+E GI P+  + + L+  L +
Sbjct: 454 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCR 513

Query: 125 LGKPDEANRV---FQDMICGDLTPCTATFNIMLNGLCKNR----------YTD----NAL 167
             +  EA R    +  + C D+    + F I    L  N           Y D     A 
Sbjct: 514 ENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAG 573

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           ++F  ++K G +P+  TY +LI+G C  G +  A  +  ++   G  P 
Sbjct: 574 KLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 9/410 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           + ST  +N  +     A R++ AE      +R  V PD+ T+N +I   C+         
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 64  ILNRMREAGISPDVVTYNSLIAGATR----NSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           +   ++  G++P V TYNSLI G  +     ++    + LL EM+E GI P   ++  L+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM-LLKEMVEAGISPTAVTFGVLI 271

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +      A RVF++M    +     T+N +++GLC     +  +++   ++  G  
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  +T+  ++KG CK G +  A   +  + +    P+ + Y  ++    R  K +  + +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             AM +KG + +   Y  +I  F + G  + A+  +++M   G++ D+V+YN LI   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G++  A  LLDEM + G E +  T+  +I G C  GNIK A      M K    +N+  
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 405
           YN  +    + GK+D A ++   M     V +  TY ++   + +    P
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 173/379 (45%), Gaps = 42/379 (11%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P   + N+L+AG      +  +       L   + PD++++N+++  L ++G+  +A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 135 FQDMICGDLTPCTATFNIML--------------------------------------NG 156
            +D+    L P  AT+N ++                                      NG
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CKN  T  A+R+F  +++ G    +VTYN LI GLC  G++     +++E+ D G +PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++K   +        + +  M  +    D   Y  +I  + ++G++++A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G+  ++ +YN LI  + + G   +A  LLDEM+++G E D  T+ +LI  LC  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A   L+ M+++G + N   YN I+      G I  A  +   ME      +  TY+
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 393 SMVHNLCKAKRLPSASKLL 411
             +   C+  ++  A+ LL
Sbjct: 514 VFIKYFCQIGKMDEANDLL 532



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 164/347 (47%), Gaps = 7/347 (2%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   S N+L+  L    + D A + F+  +   ++P   TFN +++GLC+      A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 170 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            + ++  G  P + TYN LI G CK   AG +     +LKE+ ++G +P A+T+  ++  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +N      + +   MK++G       Y ++I+     G+++E    ME+M   G+  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            +++  ++  +CK+G +  A   +D M ++  E D   + ILID   + G ++ A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M K G   N+  YNC++    + G    A  + + M+ K    D  TY+ ++  LC   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +  A KLL    + G+         ++ G    G  + A +I++++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 7/203 (3%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H P+  +   ++      ++  L  +   +  R+  + D + + TVI+   +IG+L++A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 329
           D  + +   G+   + +YN+LI+ YCK+G     Y   +LL EM + G      T  +LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
           +G CK  N   A    E M + G  +++  YN ++  L  +GK++  + + E ME     
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 386 KDSFTYSSMVHNLCKAKRLPSAS 408
            +  T+  ++   CK   +  A+
Sbjct: 332 PNEITFGCVLKGFCKKGMMADAN 354


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 23/406 (5%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            +RM E    P    YN+++     + ++  +L L + M+  G  P+  +YN LM  L +
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   +A ++F +M+   + P    + ++L+ LC     D A+++   ++  G +P+ VT
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN  + GLCK GR+  A   L  L D G A     Y+ ++   F+ R++  G      M 
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +  + D   Y  +I    + GR+++A  +++ M   G   D   YNT++ + C  G LE
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L  EM +     D  T TI+I GLCK G +  A    + M + G D  +  YN ++
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459

Query: 365 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 407
           D   ++G+++ A  +F  ME                 V+DS +   +VH++C++ ++  A
Sbjct: 460 DGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKA 519

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            KLL S + SGV         +++GL    C+  A+ +   +R+ K
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGL----CK--ARNLDGAVRLFK 559



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 191/412 (46%), Gaps = 19/412 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    YN ++ A            + NRM  AG +P+  TYN L+ G  +  +   +L +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEML+ GI P+V  Y  L+  L   GK DEA ++   M      P   T+N  L+GLCK
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               + A +    LQ  GF   L  Y+ LI GL +A R        K + +   +P+ + 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT +++ C    + +  L  L  MK+KG+  D F Y TV+      G L+ A     +M+
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            + + LD  +   +I   CK G ++ A  + DEM + G +    T+  LIDG  + G ++
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 340 GARLHLEYMNKIGFDSNL--------------EAYNCIVDRLGKDGKIDHAI----NVFE 381
            AR+    M ++G + +L              E+   +V  + + G++  A     ++ +
Sbjct: 470 EARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           S  V D  TY+++++ LCKA+ L  A +L       G+   +     ++DGL
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 185/410 (45%), Gaps = 57/410 (13%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNM------------------ 47
           + ++  + + + C A ++++A  ++      G LPD VTYN                   
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300

Query: 48  -----------------LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN 90
                            LID   Q   FD G+     M E  ISPDVV Y  +I G    
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  +L  LD M + G  PD + YN+++  L   G  + A+ +  +M+  +L   + T 
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
            IM+ GLCK    D A+++F  + +HG  P ++TYN LI G  + GRL  AR +  ++ +
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-E 479

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G+ P+     T+     R+          S   RK           ++    + G++ +
Sbjct: 480 MGNNPSLFLRLTLGANQVRD----------SESLRK-----------LVHDMCQSGQVLK 518

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  ++  GV  D+V+YNTLIN  CK   L+ A  L  E++ +G   D+ T+  LID
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           GL +A     A +  + + + G   +L  YN ++  L +  K+  AIN++
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 203/460 (44%), Gaps = 25/460 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK      A  +  + +  G++P+V  Y +L+ + C     D    +L  M++
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN+ ++G  +   ++ +   L  + + G    +  Y+ L+  LFQ  + DE
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               ++ M+  +++P    + IM+ G  +    ++AL     ++K GFVP+   YN ++K
Sbjct: 331 GFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLK 390

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK-YKLGLEILSAMKRKGYT 249
            LC  G L  A  +  E+  +    ++ T  TIM C    R      ++I   M   G  
Sbjct: 391 VLCDHGDLERAHTLRSEMLQNNLVLDSTT-QTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQM-----------VTDGVQL--DIVSYNTLINL 296
                Y  +I  F + GRL+EA     +M           +T G     D  S   L++ 
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHD 509

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            C+ G++  AY LL  +   G   D  T+  LI+GLCKA N+ GA    + +   G   +
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569

Query: 357 LEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              Y  ++D L +  + + A+    N+ +S        Y+SM+ +LC+ K+L  A  L L
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629

Query: 413 SCLKSGV------RILKSAQKAVVDGLRHSGCRREAKKIQ 446
             L           +L +A K + DG    G R   K  Q
Sbjct: 630 DYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQ 669



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 194/432 (44%), Gaps = 23/432 (5%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+  TYN+L+D  C+         + + M + GI P+V  Y  L++       +  +
Sbjct: 202 GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEA 261

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LL  M + G  PD  +YN+ +  L ++G+ +EA +    +  G        ++ +++G
Sbjct: 262 VQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDG 321

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L + R  D     ++ + +    P++V Y I+I+G  +AGR+  A   L  +   G  P+
Sbjct: 322 LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD 381

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y T++K    +   +    + S M +     D      +I    K G + EA    +
Sbjct: 382 TFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC-------------DKY 323
           +M   G    +++YN LI+ + +EG+LE A +L  +ME                   D  
Sbjct: 442 EMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSE 501

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           +   L+  +C++G +  A   L  +   G   ++  YN +++ L K   +D A+ +F+ +
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           ++K    D  TY +++  L +A R   A  L  + L+SG     S   ++ + +  S CR
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG----SSPSLSIYNSMMRSLCR 617

Query: 440 REAKKIQSKIRM 451
              KK+   I +
Sbjct: 618 --MKKLSQAINL 627



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 174/380 (45%), Gaps = 22/380 (5%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A R+E A + +    + G +PD   YN ++   C     +  +T+ + M +  +  D  
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T   +I G  +  L+  ++ + DEM E G  P V +YN+L+   ++ G+ +EA  +F  M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 139 ICGDLTPC--------------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             G+  P               + +   +++ +C++     A ++ R +   G VP++VT
Sbjct: 479 EMGN-NPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI GLCKA  L  A  + KEL   G +P+ ITY T++    R  +    + +   + 
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEAT----DYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + G +     Y +++ +  ++ +L +A     DY+ +     V+ ++++     +   ++
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN---AHKEIED 654

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G L+     L +++++        +TI + GLC+      A      + + G D      
Sbjct: 655 GSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 361 NCIVDRLGKDGKIDHAINVF 380
             +++ L  D  ++ A+++ 
Sbjct: 715 ALLINYLCWDRNLNAAVDIM 734


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 9/410 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           + ST  +N  +     A R++ AE      +R  V PD+ T+N +I   C+         
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 64  ILNRMREAGISPDVVTYNSLIAGATR----NSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           +   ++  G++P V TYNSLI G  +     ++    + LL EM+E GI P   ++  L+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM-LLKEMVEAGISPTAVTFGVLI 271

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +   +      A RVF++M    +     T+N +++GLC     +  +++   ++  G  
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  +T+  ++KG CK G +  A   +  + +    P+ + Y  ++    R  K +  + +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 391

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             AM +KG + +   Y  +I  F + G  + A+  +++M   G++ D+V+YN LI   C 
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G++  A  LLDEM + G E +  T+  +I G C  GNIK A      M K    +N+  
Sbjct: 452 KGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVT 511

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 405
           YN  +    + GK+D A ++   M     V +  TY ++   + +    P
Sbjct: 512 YNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 173/379 (45%), Gaps = 42/379 (11%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P   + N+L+AG      +  +       L   + PD++++N+++  L ++G+  +A  V
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 135 FQDMICGDLTPCTATFNIML--------------------------------------NG 156
            +D+    L P  AT+N ++                                      NG
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CKN  T  A+R+F  +++ G    +VTYN LI GLC  G++     +++E+ D G +PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+  ++K   +        + +  M  +    D   Y  +I  + ++G++++A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G+  ++ +YN LI  + + G   +A  LLDEM+++G E D  T+ +LI  LC  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            ++ A   L+ M+++G + N   YN I+      G I  A  +   ME      +  TY+
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 393 SMVHNLCKAKRLPSASKLL 411
             +   C+  ++  A+ LL
Sbjct: 514 VFIKYFCQIGKMDEANDLL 532



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 164/347 (47%), Gaps = 7/347 (2%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P   S N+L+  L    + D A + F+  +   ++P   TFN +++GLC+      A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 170 FRGLQKHGFVPELVTYNILIKGLCK---AGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            + ++  G  P + TYN LI G CK   AG +     +LKE+ ++G +P A+T+  ++  
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +N      + +   MK++G       Y ++I+     G+++E    ME+M   G+  +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            +++  ++  +CK+G +  A   +D M ++  E D   + ILID   + G ++ A    E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M K G   N+  YNC++    + G    A  + + M+ K    D  TY+ ++  LC   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +  A KLL    + G+         ++ G    G  + A +I++++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 7/195 (3%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H P+  +   ++      ++  L  +   +  R+  + D + + TVI+   +IG+L++A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY---LLLDEMEKQGFECDKYTHTILI 329
           D  + +   G+   + +YN+LI+ YCK+G     Y   +LL EM + G      T  +LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
           +G CK  N   A    E M + G  +++  YN ++  L  +GK++  + + E ME     
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 386 KDSFTYSSMVHNLCK 400
            +  T+  ++   CK
Sbjct: 332 PNEITFGCVLKGFCK 346


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 194/389 (49%), Gaps = 4/389 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           ++ V+ DV ++ ++I   C+    +  + +L  +RE G SP+VV Y +LI G  +   + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + DL  EM + G+  + W+Y  L+H LF+ G   +   +++ M    + P   T+N ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N LCK+  T +A ++F  +++ G    +VTYN LI GLC+  +   A  ++ ++      
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN ITY T++       K    L +   +K +G +     Y  +++ F + G    A   
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M   G++   V+Y  LI+ + +   +E A  L   ME+ G   D +T+++LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFT 390
            G +  A    + M +   + N   YN ++    K+G    A+ +F  ME K+      +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           YS ++  LCK ++L  A  L+   + SG+
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSGI 544



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 5/372 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L++ C    CK   +EKA+ +  +  + G++ +  TY +LI    +      G+ +  
Sbjct: 202 TTLIDGC----CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M+E G+ P++ TYN ++    ++     +  + DEM E G+  ++ +YN+L+  L +  
Sbjct: 258 KMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREM 317

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EAN+V   M    + P   T+N +++G C       AL + R L+  G  P LVTYN
Sbjct: 318 KANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +L+ G C+ G    A  ++KE+ + G  P+ +TYT ++    R+   +  +++ S+M+  
Sbjct: 378 VLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEEL 437

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I  F   G++ EA+   + MV   ++ + V YNT+I  YCKEG    A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRA 497

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L  +ME++    +  +++ LI  LCK   +K A   +E M   G D +    N ++ R
Sbjct: 498 LRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICN-LISR 556

Query: 367 LGKDGKIDHAIN 378
              D  +   I+
Sbjct: 557 AKTDSPVAQIID 568



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 183/394 (46%), Gaps = 38/394 (9%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISP----------------------------- 75
           Y ++I+AY Q  S D+     N M + G  P                             
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 76  -----DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
                DV ++  +I G      +  S DLL E+ E G  P+V  Y +L+    + G+ ++
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M    L     T+ ++++GL KN        M+  +Q+HG  P L TYN ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK GR + A  +  E+ + G + N +TY T++    R  K     +++  MK      
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F  +G+L +A      + + G+   +V+YN L++ +C++G    A  ++
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMV 396

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EME++G +  K T+TILID   ++ N++ A      M ++G   ++  Y+ ++      
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           G+++ A  +F+SM  K    +   Y++M+   CK
Sbjct: 457 GQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCK 490



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 160/340 (47%), Gaps = 5/340 (1%)

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           Y  +++   Q    D +   F +M+     P +  FN +L  +  +  + N    F    
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSS-SFNQWWCFFNES 155

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           K   V ++ ++ I+IKG C+AG +  +  +L EL + G +PN + YTT++  C +  + +
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
              ++   M + G   + + Y  +I    K G  K+  +  E+M   GV  ++ +YN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CK+G+ + A+ + DEM ++G  C+  T+  LI GLC+      A   ++ M     +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            NL  YN ++D     GK+  A+++   ++ +       TY+ +V   C+      A+K+
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +    + G++  K     ++D    S     A +++S + 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 177/341 (51%), Gaps = 14/341 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF----DAGYTI 64
           + N  +   CK   +     +  + I   + PDVVTYN LI +   FV      + G++I
Sbjct: 41  MYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSI 100

Query: 65  LNRMREA----------GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           L +M+EA           ++P++ T+ +L+ G  ++  +  + ++L  M++  + P++ +
Sbjct: 101 LGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVT 160

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           YNSLM   F + + ++A ++F  +    +TP   ++ +M+NGLCKN+  D A  +F+ + 
Sbjct: 161 YNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMH 220

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
               VP+ V YN LI GLCK+ R+      + E+ D G   N ITY +++    +N +  
Sbjct: 221 SKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVD 280

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             + +L+ +K +G   + + Y  ++    K GRL++A +  + ++  G QLD   Y  +I
Sbjct: 281 KAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMI 340

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           N  CKEG L+ A  LL +ME      D  T+ I I  L ++
Sbjct: 341 NGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFES 381



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 20/358 (5%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           LN +    + PDVV YN++I    ++ L+S   DL  EM++  I PDV +YN+L++ L  
Sbjct: 27  LNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLN 86

Query: 125 --------------LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
                         LG+  EA  +   M    +TP   TF  +++GLCK+     A  + 
Sbjct: 87  FVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVL 146

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
             + K    P +VTYN L+ G      +  A+ +   +   G  PN  +Y  ++    +N
Sbjct: 147 AIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKN 206

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
           +       +   M  K    D   Y ++I    K  R+ +  D++ +M   G   +I++Y
Sbjct: 207 KMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITY 266

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMN 349
           N+L++  CK  +++ A  LL +++ QG   + YT+TIL+DGLCK G ++ A+ ++ + +N
Sbjct: 267 NSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLN 326

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           K G+  +   Y  +++ L K+G +D A+++   ME      D  TY   +  L ++ R
Sbjct: 327 K-GYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDR 383



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 127/262 (48%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R     V   CK   ++KA  ++   I+  V P++VTYN L+D Y      +    + 
Sbjct: 122 NIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLF 181

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N +   G++P+V +Y  +I G  +N ++  + +L  EM    + PD  +YNSL+  L + 
Sbjct: 182 NTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKS 241

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  +      +M          T+N +L+GLCKN   D A+ +   ++  G  P + TY
Sbjct: 242 RRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTY 301

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            IL+ GLCK GRLR A+ + ++L + G+  +A  YT ++    +       L +LS M+ 
Sbjct: 302 TILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMED 361

Query: 246 KGYTFDGFGYCTVIAAFVKIGR 267
              T DG  Y   I A  +  R
Sbjct: 362 NKCTPDGVTYEITIRALFESDR 383



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 18/324 (5%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK-------------- 190
           P    +N +++ LCK++   +   ++  +      P++VTYN LI               
Sbjct: 37  PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G+++ A  +L ++      PN  T+TT++    ++ + K    +L+ M ++    
Sbjct: 97  GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEP 156

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y +++  +  +  + +A      +   G+  ++ SY  +IN  CK   ++ A  L 
Sbjct: 157 NIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLF 216

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +    D   +  LIDGLCK+  I      +  M+  G  +N+  YN ++D L K+
Sbjct: 217 KEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKN 276

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            ++D AI +   ++ +    + +TY+ +V  LCK  RL  A ++    L  G ++     
Sbjct: 277 HQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIY 336

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             +++GL   G   EA  + SK+ 
Sbjct: 337 TVMINGLCKEGFLDEALSLLSKME 360



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 28/320 (8%)

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGF----------VPELVTYNILIKGLCKAGRLRTARW 203
           + GLC N     AL     +   GF           P++V YN +I  LCK   +     
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 204 ILKELGDSGHAPNAITYTTI----MKCCFRNRKYKLGLEILSAMKR----------KGYT 249
           +  E+ D    P+ +TY T+    +   +   + + G  IL  MK           K  T
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   + T++    K G +K+A + +  M+   V+ +IV+YN+L++ Y    ++  A  L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            + +  +G   +  ++ ++I+GLCK   +  A    + M+      +  AYN ++D L K
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
             +I    +    M    +  +  TY+S++  LCK  ++  A  LL      G+R     
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              +VDGL  +G  R+A+++
Sbjct: 301 YTILVDGLCKNGRLRDAQEV 320


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 188/374 (50%), Gaps = 7/374 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRM---REAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           ++N +++   Q   F       N +   +   ISP+V+T+N +I    +  L+  ++ + 
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M      PDV++Y +LM  L +  + DEA  +  +M      P   TFN+++NGLCK 
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A ++   +   G +P  VTYN LI GLC  G+L  A  +L  +  S   PN +TY
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            TI+    +  +   G  +L+ M+ +GY  + + Y T+I+   K G+ +EA    ++M  
Sbjct: 343 GTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G +L+ + Y+ +I+  C++GK + A  +L EM  +G   + YT + L+ G  +AGN   
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A    + M K  F  N   Y+ ++  L KDGK+  A+ V+  M  K    D   YSSM++
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMIN 522

Query: 397 NLCKAKRLPSASKL 410
            L  A  +  A +L
Sbjct: 523 GLSIAGLVEDAMQL 536



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 198/415 (47%), Gaps = 27/415 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA+R+++A +++ +    G  P  VT+N+LI+  C+         +++ M   G  P+
Sbjct: 244 LCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPN 303

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L  ++ LLD M+     P+V +Y ++++ L + G+  +   V  
Sbjct: 304 EVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLA 363

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M           ++ +++GL K   +  A+ +F+ +   G+    + Y+ +I GLC+ G
Sbjct: 364 LMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDG 423

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  +L E+ + G  PNA T +++MK  F        +E+   M +  +T +   Y 
Sbjct: 424 KPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYS 483

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G++KEA     QM+  G + D+V+Y+++IN     G +E A  L +EM  Q
Sbjct: 484 VLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ 543

Query: 317 GFEC--DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL----------------- 357
           G +   D  T+ IL++ LCK  +I  A   L  M   G D +L                 
Sbjct: 544 GPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPP 603

Query: 358 ----EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
               E  + +V RL K  ++  A  + E M  K       T++ +V NLCK K++
Sbjct: 604 QDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKV 658



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 94/191 (49%), Gaps = 2/191 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+T + +  +   C+  + + A  ++ +    G  P+  T + L+  + +  +      
Sbjct: 406 ELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVE 465

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M +   + + V Y+ LI G  ++  +  ++ +  +ML  G  PDV +Y+S+++ L 
Sbjct: 466 VWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLS 525

Query: 124 QLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             G  ++A +++ +M+C   D  P   T+NI+LN LCK      A+ +   +   G  P+
Sbjct: 526 IAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPD 585

Query: 182 LVTYNILIKGL 192
           LVT  I ++ L
Sbjct: 586 LVTCTIFLRML 596


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 210/428 (49%), Gaps = 6/428 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + L V   V +  +++D  C+    + G  +++ +   G+  +VVTYN+ I G  +   L
Sbjct: 221 VNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDL 280

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
               ++L  M + G+  +V +Y  L+H    +GK +EA R+F++M    +      +  +
Sbjct: 281 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 340

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  C++     AL +F  +   G +P   TY  LI G+CKAG++  A+ ++ E+   G 
Sbjct: 341 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 400

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
             N + + T++     +      L +   M++KG   D F Y ++ +   K+ R  EA  
Sbjct: 401 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 460

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  MV  GV  + +S+ TLI++YCKEG    A  +  EME++G   +  T+ +LIDG  
Sbjct: 461 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 520

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K GN+K A    + +   G   ++     ++     DGK+D A+ +F+ M     V +  
Sbjct: 521 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 580

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ-SK 448
           TY++M+  L K  R   A KL     ++G+    +   ++V  L HS     + +IQ S+
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL-HSADESISMQIQGSQ 639

Query: 449 IRMAKISH 456
           ++  K+  
Sbjct: 640 VKANKVDQ 647



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 188/397 (47%), Gaps = 6/397 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L I +   CK   +E    ++ +    GV  +VVTYN  I+ Y + +       IL  M 
Sbjct: 232 LTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME 291

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++ +VVTY  LI G +    +  +  L +EM E GI  DV+ Y S++ C  + G   
Sbjct: 292 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F +M    L P   T+  +++G+CK    + A  +   +Q  G     V +N LI
Sbjct: 352 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY 248
            G C++G +  A  +   +   G   +   Y +I    C  NRK +    +L +M  +G 
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE-AKGLLFSMVERGV 470

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +   + T+I  + K G   EA     +M   G   +I++YN LI+ Y K G ++ A+ 
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L DE+E +G   D YT T LI G C  G +  A    + M + G   N+  Y  ++  L 
Sbjct: 531 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 590

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
           KDG+ + A  +++ M+      D   YSS+V +L  A
Sbjct: 591 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 177/445 (39%), Gaps = 39/445 (8%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +++L   Y     F         M + G   D  +    +    R   +   L     M+
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
            + +   V+S   ++  L + G  +   ++  ++    +     T+N  + G  K     
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
               +   ++K G    +VTY +LI G    G++  A+ + +E+ + G   +   YT+I+
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            C  R+   K  L +   M  KG       Y  +I    K G+++ A   + +M   G+ 
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH------------------- 325
           L+ V +NTLI+ YC+ G ++ A  L   MEK+G E D + +                   
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461

Query: 326 ----------------TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
                           T LID  CK GN   A+     M + G   N+  YN ++D   K
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A  + + +E    + D +T +S++H  C   ++  A KL     + G+      
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
             A++ GL   G   EA K+  +++
Sbjct: 582 YTAMISGLSKDGRSEEAFKLYDEMK 606



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 110/220 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + N  +  +C++  +++A  + +   + G+  DV  YN +    C+    D    +
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M E G+SP+ +++ +LI    +      +  +  EM E G  P++ +YN L+    +
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   EA+++  ++    L P   T   +++G C +   D AL++F  + + G VP +VT
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           Y  +I GL K GR   A  +  E+ ++G  P+   Y++++
Sbjct: 582 YTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 188/365 (51%), Gaps = 2/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +  F +  R++ A +++   I+LG  PD VT++ LI+  C    F       + M 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G  P++ TYN++I G  +    + ++ LL +M + G  PD+  YN+++  L +     
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F ++    + P   T++I+++GLC +   + A  +F  +     +P++VT+NIL+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY 248
             LCK G L  A+ I+K + + G  PN  TY ++M   C +N+ ++  + +  AM  KG 
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARM-VFDAMITKGC 360

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I  + K  R+ EA +  ++M   G+  +  +YNTLI+  C+ G+   A  
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARE 420

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  +M+ QG   D  T TIL+D LCK G +  A      M       NL  Y+ ++  + 
Sbjct: 421 LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMY 480

Query: 369 KDGKI 373
           K GKI
Sbjct: 481 KSGKI 485



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 176/344 (51%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV  +N+LI+ + +    D  +++L ++ + G  PD VT++SLI G       + +++  
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           DEM+  G  P++ +YN+++    ++GK   A  + + M      P    +N +++GLCK+
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           R    AL +F  ++  G  P++ TY+IL+ GLC + +   A  +  E+      P+ +T+
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    +         I+  M  KG   +   Y +++  +    ++ EA    + M+T
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   ++VSYN LIN YCK  +++ A  L DEM  +G   + + +  LI GLC+AG    
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           AR   + M   G   +L     ++D L K G +D+A+ +F +M+
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 177/363 (48%), Gaps = 4/363 (1%)

Query: 53  CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDV 112
           C   + +      N M      P +V ++ L++   R       L L   +  + I  DV
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           + +N L++C  +L + D A  V   +I     P   TF+ ++NGLC       A+  F  
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +   G+ P L TYN +IKG CK G+   A  +LK++  +G  P+ + Y TI+    ++R 
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L+I S +K KG   D F Y  ++       + +EA+    +M++  +  D+V++N 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           L++  CKEG L  A  ++  M ++G E +  T+  L++G C    +  AR+  + M   G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
              N+ +YN +++   K  +ID A  +F+ M     + ++F Y++++  LC+A R   A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 409 KLL 411
           +L 
Sbjct: 420 ELF 422



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 8/389 (2%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V ++ L+ A  +   +    ++  R+    I  DV  +N LI   +R   +  +  
Sbjct: 81  LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFS 140

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L +++++G  PD  +++SL++ L    K   A   F +M+     P   T+N ++ G C
Sbjct: 141 VLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K   T  A+ + + + K G  P++V YN +I GLCK   +  A  I  E+   G  P+  
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+ +M     + + +    + + M       D   +  ++    K G L EA   ++ M
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  GV+ +  +YN+L+N YC + K+  A ++ D M  +G   +  ++ ILI+G CKA  I
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             AR   + M+  G   N   YN ++  L + G+   A  +F+ M+ +    D  T + +
Sbjct: 381 DEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTIL 440

Query: 395 VHNLCKAKRLPSASKLLL----SCLKSGV 419
           + +LCK   L +A +L      SCLK  +
Sbjct: 441 LDSLCKLGYLDNALRLFRAMQDSCLKPNL 469



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 127/266 (47%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G+    + N  +   CK   + +A  I  +    GV PDV TY++L+   C     +   
Sbjct: 220 GRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEAS 279

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            + N M    I PDVVT+N L+    +  +LS +  ++  M+E G+ P+  +YNSLM+  
Sbjct: 280 ALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGY 339

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
               K  EA  VF  MI     P   ++NI++NG CK +  D A  +F  +   G +P  
Sbjct: 340 CLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNT 399

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             YN LI GLC+AGR   AR + K++   G +P+ +T T ++    +       L +  A
Sbjct: 400 FNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRL 268
           M+      +   Y  +I A  K G++
Sbjct: 460 MQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 4/192 (2%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +++A V+I          +++    ++ D+  +N LIN + +  +++ A+ +L ++ K G
Sbjct: 90  LLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLG 149

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           FE D  T + LI+GLC       A    + M   G+  NL  YN I+    K GK   A+
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAV 209

Query: 378 NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            + + M+      D   Y++++  LCK + +  A  +       GVR        ++ GL
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269

Query: 434 RHSGCRREAKKI 445
            +S  + EA  +
Sbjct: 270 CNSDQKEEASAL 281


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 212/449 (47%), Gaps = 5/449 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +  K+N L K+  +     R GVL DV TY   I+AYC+    D    +  +M E
Sbjct: 210 NFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGE 269

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTYN+LI G  ++  L  +L     M+E  + P + +Y  L++ L +  K DE
Sbjct: 270 GGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDE 329

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN V  +M     +P    FN +++G  +    D+ALR+   +   G  P  VT+N L++
Sbjct: 330 ANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQ 389

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+  ++  A  +L+ L  +  + N    + ++    ++ K+   L+I+ A+  +    
Sbjct: 390 GFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKV 449

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
           +      ++    K G+  EA D   ++    G+  +  + N L+   C+ G +E  + +
Sbjct: 450 NDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPV 509

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM ++G   D  ++  LI G CK+G I+ A    E M K GF  +   YN ++  L  
Sbjct: 510 CKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLAD 569

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK+D    V    +    V + +TY+ M+   C A R+ +A  L    + + V +    
Sbjct: 570 KGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVV 629

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
              ++     +G   EA K++  +R + I
Sbjct: 630 YNILIAAHSKAGNFTEAFKLRDAMRSSNI 658



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 164/339 (48%), Gaps = 5/339 (1%)

Query: 4   KLSTRLLNICVCTFCKANR-LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           K++  LL + VC  CK  + LE  +       + G+  +  T N L+   C+  + +  +
Sbjct: 448 KVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVF 507

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M E G+  D ++YN+LI G  ++  +  +  L ++M++ G  PD ++YN LM  L
Sbjct: 508 PVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGL 567

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
              GK D+  RV  +     + P   T+ +ML G C     DNA+ +F  L  +      
Sbjct: 568 ADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSY 627

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEIL 240
           V YNILI    KAG    A  +   +  S   P   TY++I+   CC  N   +    I 
Sbjct: 628 VVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCC--NDLVEEAKGIF 685

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+ +G   + F Y  +I  + K+G++ +    +++M ++ +Q + ++Y  +I+ YCK 
Sbjct: 686 EEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKM 745

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           G  + A  LL+EM   G   D  T+T+L  G CK   ++
Sbjct: 746 GNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELE 784



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/481 (22%), Positives = 212/481 (44%), Gaps = 44/481 (9%)

Query: 17  FCKANRLEKAEAIIIDG--IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            CK+ RLE  EA++  G  +   V P +VTY +L++   +F  FD   ++L  M   G S
Sbjct: 286 LCKSGRLE--EALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFS 343

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+   +N+LI G +R   +  +L + D+M   G+ P+  ++N+L+    +  + ++A +V
Sbjct: 344 PNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQV 403

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM------------------------- 169
            + ++   L+      + +L+ LCK+   D+AL++                         
Sbjct: 404 LEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCK 463

Query: 170 -----------FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                      FR   K G      T N L+ GLC+ G +     + KE+ + G   + I
Sbjct: 464 CGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGI 523

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           +Y T++  C ++ K +   ++   M ++G+  D + Y  ++      G++ +    + + 
Sbjct: 524 SYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEA 583

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              GV  +I +Y  ++  YC   +++ A  L +++     E     + ILI    KAGN 
Sbjct: 584 KDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNF 643

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
             A    + M        +  Y+ I+  +  +  ++ A  +FE M     + + F Y+++
Sbjct: 644 TEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTAL 703

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +   CK  ++     +L     + ++  K     ++DG    G  +EA K+ +++    I
Sbjct: 704 IGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGI 763

Query: 455 S 455
           S
Sbjct: 764 S 764



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 193/450 (42%), Gaps = 44/450 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I V    K  + ++A +++++    G  P+   +N LID Y +  + D    + + M   
Sbjct: 316 ILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLK 375

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE--MGIPPDVWSYNSLMHCLFQLGKPD 129
           G+ P+ VT+N+L+ G  R + +  +  +L+ +L   + +  D  SY  ++H L +  K D
Sbjct: 376 GLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFD 433

Query: 130 EANRVFQDM---------------ICG---------------------DLTPCTATFNIM 153
            A ++ + +               +CG                      L   T T N +
Sbjct: 434 SALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNAL 493

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L GLC+    +    + + + + G V + ++YN LI G CK+G++  A  + +++   G 
Sbjct: 494 LYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGF 553

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  TY  +MK      K      +L   K  G   + + Y  ++  +    R+  A  
Sbjct: 554 KPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVS 613

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
              ++V + V+L  V YN LI  + K G    A+ L D M         +T++ +I G+C
Sbjct: 614 LFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMC 673

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
               ++ A+   E M   G   N+  Y  ++    K G++D   ++ + M       +  
Sbjct: 674 CNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKI 733

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY+ M+   CK      A+KLL   + +G+
Sbjct: 734 TYTIMIDGYCKMGNTKEATKLLNEMIANGI 763



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 187/390 (47%), Gaps = 7/390 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           Q + F   +         G+ P + + N L++   +++ L  S  + D M   G+  DV+
Sbjct: 183 QHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVY 242

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG- 172
           +Y + ++   + GK DEA  +F  M  G + P   T+N +++GLCK+   + AL MF+G 
Sbjct: 243 TYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL-MFKGR 301

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           + ++   P LVTY IL+ GL K  +   A  +L E+   G +PN   +  ++    R   
Sbjct: 302 MVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGN 361

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L +   M  KG   +   + T++  F +  ++++A   +E ++++ + ++  + + 
Sbjct: 362 MDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY 421

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKI 351
           +++L CK  K ++A  ++  +  +  + +    T+L+ GLCK G +++   L     +K 
Sbjct: 422 VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKK 481

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           G  +N    N ++  L + G ++    V + M     V D  +Y++++   CK+ ++  A
Sbjct: 482 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 541

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            KL    +K G +        ++ GL   G
Sbjct: 542 FKLKEKMMKQGFKPDTYTYNFLMKGLADKG 571



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 184/420 (43%), Gaps = 41/420 (9%)

Query: 17  FCKANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM------ 68
           FC+ N++E+AE ++  +    L V  D  +Y  ++   C+   FD+   I+  +      
Sbjct: 391 FCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIK 448

Query: 69  ------------------------------REAGISPDVVTYNSLIAGATRNSLLSCSLD 98
                                          + G++ +  T N+L+ G      +     
Sbjct: 449 VNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFP 508

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +  EM+E G+  D  SYN+L+    + GK +EA ++ + M+     P T T+N ++ GL 
Sbjct: 509 VCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLA 568

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                D+  R+    + HG VP + TY ++++G C A R+  A  +  +L  +    + +
Sbjct: 569 DKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYV 628

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y  ++    +   +    ++  AM+        F Y ++I        ++EA    E+M
Sbjct: 629 VYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEM 688

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             +G+  ++  Y  LI  YCK G+++    +L EM     + +K T+TI+IDG CK GN 
Sbjct: 689 RNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNT 748

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           K A   L  M   G   +   Y  +     K+ +++  +    ++ +++  TY+++V  L
Sbjct: 749 KEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEE-ITYTTLVDKL 807


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 210/481 (43%), Gaps = 83/481 (17%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIID------GIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           R  N  +  F +A R   A+A          G R+   P++ TYN+++ + C     D  
Sbjct: 120 RSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIA--PNLQTYNIVLRSLCARGDLDRA 177

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            T+ + +R   ++PD +TY++L+ G  +   L  +LDLLDEM    + PDV  YN+L+  
Sbjct: 178 VTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGG 237

Query: 122 LFQLG------------------KPD------------------EANRVFQDMICGDLTP 145
            F+ G                  +P+                  E   V++ M+  +L P
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR-------- 197
              T+ I+++GLC++   D A R++  + K G V +   YN L+KG C+AGR        
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357

Query: 198 ----------LRTARWILKELGDSGHA-----------------PNAITYTTIMKCCFRN 230
                     LRT   ++K L DSG                   P+ +T+ T++    +N
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                   I    +  G   D F Y ++I     +GRL +A    E+M  DG + +   Y
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N LI+ +C+  +   A  +  +M   G      T+  LIDGLCKA   + A      M +
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            GF  ++  Y  ++  L  D KID A+++++ +  K    D   ++ ++H LC A ++  
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDE 597

Query: 407 A 407
           A
Sbjct: 598 A 598



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 182/368 (49%), Gaps = 5/368 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  V  FC+A R+++A     D      L ++ TYN++I         D    + + +
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 69  -REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            ++    PD VT+ +LI G  +N   + +  + +E    G   DV+SY+S+++ L  +G+
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             +A +V++ M      P +  +N +++G C+   T +A+R++  +  +G  P ++TYN 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCKA + + A  + +E+ ++G  P+  TY ++++  F ++K    L I   +  KG
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLEAA 306
              D   +  +I      G++ EA      M        ++V+YNTL++   + G ++ A
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKA 634

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 365
             L   + + G E D  ++   I GLC    I +G +L  E +++ G    +  +N +V 
Sbjct: 635 ATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSR-GIIPTVITWNILVR 693

Query: 366 RLGKDGKI 373
            + K G I
Sbjct: 694 AVIKYGPI 701



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 183/375 (48%), Gaps = 5/375 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   C++  ++ A  +  + I+ G++ D   YN L+  +CQ       +   +    A
Sbjct: 304 ILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFA 363

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP--PDVWSYNSLMHCLFQLGKPD 129
           G+  ++ TYN +I G   + ++  +++L D +LE  +   PD  ++ +L+H L Q G  +
Sbjct: 364 GLR-NLRTYNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F++           +++ M+NGLC      +A++++  + K G  P    YN LI
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+  R   A  I  ++ D+G +P  ITY T++    +  KY+    +   M   G+T
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYL 308
            D   Y ++I       ++ +A    +Q++  G+++D++ +N LI+  C  GK+ EA ++
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
             D  EK+    +  T+  L+DGL + G I  A      + + G + ++ +YN  +  L 
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 369 KDGKIDHAINVFESM 383
              +I   I + + +
Sbjct: 662 SCDRIHEGIQLLDEV 676



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 171/391 (43%), Gaps = 50/391 (12%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNIMLNGLCKNR 161
           +G  P + S+N+L+    +  +  +A+  F  +  G     + P   T+NI+L  LC   
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A+ +F  L++    P+ +TY+ L+ GL K  RL  A  +L E+  S   P+ + Y 
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232

Query: 222 TIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            ++  CF+  +++  + +   + K  G   +   Y  ++    K GR KE  +  E+MV 
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           + +Q D+++Y  LI+  C+ G ++ A  +  E+ K G   D   +  L+ G C+AG ++ 
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352

Query: 341 ARLHLEYMNKIGFDS--NLEAYNCIVDRLGKDGKIDHAI--------------------- 377
           A    ++ +  GF    NL  YN ++  L   G +D AI                     
Sbjct: 353 A---WKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409

Query: 378 ---------------NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                           +FE   V     D F+YSSM++ LC   RL  A K+     K G
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            +       A++ G        +A +I SK+
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ + N  +  FC+  R   A  I       G  P V+TYN LID  C+   +    +
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M E G +PD+ TY SLI G   +  +  +L +  ++L  G+  DV  +N L+H L 
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590

Query: 124 QLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             GK DEA  VF DM    +  P   T+N +++GL +  Y D A  ++  + + G  P++
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDI 650

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           ++YN  IKGLC   R+     +L E+   G  P  IT+  +++   +
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 196/428 (45%), Gaps = 19/428 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    YN +               + NRM  +G  P+  TY  L+ G  +  +   +L +
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKM 236

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEMLE GI PDV  Y  L+  L   G+ ++A R+   M      P   T+ + L+GLCK
Sbjct: 237 FDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCK 296

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A   F  LQ  GF   L+ Y+ LI GL +AGR         E+     +P+   
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT +++      + K    +L  MK KG+  D F Y T++ A   +G +  A   M +M+
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            + V LD  ++N +I   CK+G ++ A  + DEM + G      T+  LIDGL +AG ++
Sbjct: 417 QNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLE 476

Query: 340 GARLHLEYMNKIGFDSNL--------------EAYNCIVDRLGKDGKIDHAIN----VFE 381
            AR+    M ++G + +L              E+   +VD + + G++  A      + E
Sbjct: 477 EARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIE 535

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           S  V D  TY+++++ LCKAK L  A +L       G+   +     ++DGL  +    +
Sbjct: 536 SGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREND 595

Query: 442 AKKIQSKI 449
           A  +   I
Sbjct: 596 ATMLFQNI 603



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 198/441 (44%), Gaps = 23/441 (5%)

Query: 30  IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR 89
           + D    G+      +  L+ A+             +RM +    P    YN++      
Sbjct: 132 LADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVD 191

Query: 90  NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
             ++  +L L + M+  G  P+  +Y  LM  L + G   +A ++F +M+   + P    
Sbjct: 192 RGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKI 251

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           + ++L+ LC     ++A R+   ++++G  P+ VTY + + GLCKAGR+  A    + L 
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D G     I Y+ ++   F+  ++  GL   + M  K  + D   Y  +I  F + GR K
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTK 371

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A   +++M   G   D   YNTL+      G ++ A  L+ EM +     D  TH I+I
Sbjct: 372 DAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI 431

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----- 384
            GLCK G I  A    + M + G    +  YN ++D L + G ++ A  +F  ME     
Sbjct: 432 CGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNP 491

Query: 385 ------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
                       V+D+ +   +V  +C++ ++  A KLL   ++SGV         +++G
Sbjct: 492 SLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLING 551

Query: 433 LRHSGCRREAKKIQSKIRMAK 453
           L    C+  AK +   +R+ K
Sbjct: 552 L----CK--AKNLDGALRLFK 566



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 13/387 (3%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
            ++  + + + C   R+E A  ++      G  PD VTY + +   C+    D  +    
Sbjct: 249 VKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +++ G +  ++ Y+ LI G  +       L    EML   I PD+  Y  L+    + G
Sbjct: 309 LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAG 368

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  +  +M      P T  +N +L  L      D A  +   + ++  V +  T+N
Sbjct: 369 RTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR- 245
           I+I GLCK G +  A  +  E+G+ G  P  +TY  ++   +R    +    +   M+  
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMG 488

Query: 246 ------------KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
                            D      ++    + G++ +A   +  ++  GV  D+V+YNTL
Sbjct: 489 NNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTL 548

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           IN  CK   L+ A  L  E++ +G   D+ T+  LIDGL +A     A +  + + + G 
Sbjct: 549 INGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGG 608

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVF 380
             +L  YN ++  L +  K+  AIN++
Sbjct: 609 FPSLPIYNTMMRSLCRMKKLSQAINLW 635



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 181/400 (45%), Gaps = 44/400 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  I +  F +A R + A  ++ +    G +PD   YN L+ A     + D   ++++ M
Sbjct: 356 LYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEM 415

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  +  D  T+N +I G  +  L+  ++ + DEM E G  P V +YN+L+  L++ G  
Sbjct: 416 LQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGML 475

Query: 129 DEANRVFQDMICGDLTPC--------------TATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           +EA  +F  M  G+  P               T +   +++G+C++     A ++ RG+ 
Sbjct: 476 EEARMLFHKMEMGN-NPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGII 534

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           + G VP++VTYN LI GLCKA  L  A  + KEL   G +P+ ITY T++   +R  +  
Sbjct: 535 ESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREN 594

Query: 235 LGLEILSAMKRKGYTFDGFG----YCTVIAAFVKIGRLKEAT----DYMEQMVTDGVQLD 286
               +   + R G    GF     Y T++ +  ++ +L +A     DY+ +      + +
Sbjct: 595 DATMLFQNILRSG----GFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDE 650

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY-------THTILIDGLCKAGNIK 339
           +++        C E         LDE  K+  + D+         +TI + GLC+   I 
Sbjct: 651 VIANAR----KCFEDG------FLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKID 700

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            A      + + G          +++ L  D  ++ A+++
Sbjct: 701 DALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDI 740



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 151/360 (41%), Gaps = 4/360 (1%)

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            D L +    G+P    ++ +L+      G+  EA   F  M   D  P    +N +   
Sbjct: 129 FDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQV 188

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L        AL ++  +   G +P   TY +L+ GLCK G    A  +  E+ + G  P+
Sbjct: 189 LVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPD 248

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              YT ++       + +    +L +MK  G   D   Y   ++   K GR+ EA    E
Sbjct: 249 VKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   G  L ++ Y+ LI+   + G+ +       EM  +    D   +TILI    +AG
Sbjct: 309 LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAG 368

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
             K A L L+ M   GF  +   YN ++  L   G ID A ++   M     V DS T++
Sbjct: 369 RTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHN 428

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            M+  LCK   +  A ++     + G         A++DGL  +G   EA+ +  K+ M 
Sbjct: 429 IMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMG 488


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 192/402 (47%), Gaps = 25/402 (6%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T L N  +      N+L+  E +    +  G+ PDV T+N+LI A C+         +
Sbjct: 156 LDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILV 215

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M   G+ PD  T+ +L+ G      +  +  + ++ML+ G P    + N L+H   +
Sbjct: 216 MEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCK 275

Query: 125 LGKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            G+ +EA     +M   G  T     +N M N  C+                    P+  
Sbjct: 276 EGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQ--------------------PDEF 315

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN+LI  LC  G+L+ A  +L+E+  SG A N ITY T++    +N+K +   EI   M
Sbjct: 316 TYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQM 375

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           + +G + +   Y T+I    K  R++EA   M+QM+ +G++ D  +YN+++  +C+EG +
Sbjct: 376 EIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDI 435

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  ++  M   G E D  T+  LI GLCKAG ++ A   L  +   G      AYN +
Sbjct: 436 QKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPV 495

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
           +  L K  +   A+ +F  ME K    D+FTY  +   L  +
Sbjct: 496 IQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNS 537



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 24/404 (5%)

Query: 47  MLIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           + ID+Y +F  ++    I+  M  E G++ D + YN L+      + L    ++   M+ 
Sbjct: 127 IFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVS 186

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            GI PDV ++N L+  L +  +   A  V ++M    L P   TF  ++ G  +    D 
Sbjct: 187 KGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDG 246

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A R+   +   G     VT N+L+ G CK GR+  A   + E+ + G             
Sbjct: 247 AFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEG------------- 293

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
                 K+ + +E+ + MK KG   D F Y  +I +    G+L+EA   + +M   G   
Sbjct: 294 ------KHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR 347

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           ++++YNTLI+ +CK  K+E A  + D+ME QG   +  T+  LIDGLCK+  ++ A   +
Sbjct: 348 NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLM 407

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKA 401
           + M   G   +   YN ++    ++G I  A ++ ++M       D  TY +++  LCKA
Sbjct: 408 DQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKA 467

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            R+  AS+LL S    G+ +   A   V+  L      +EA ++
Sbjct: 468 GRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRL 511



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 158/343 (46%), Gaps = 21/343 (6%)

Query: 17  FCKANRLEKAEAIIID---------GIRL-------GVLPDVVTYNMLIDAYCQFVSFDA 60
           FCK  R+E+A + I +          I L       G  PD  TYNMLID+ C       
Sbjct: 273 FCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQE 332

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L  M  +G + +V+TYN+LI G  +N  +  + ++ D+M   G+  +  +YN+L+ 
Sbjct: 333 ALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLID 392

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L +  +  EA ++   MI   L P   T+N ML   C+      A  + + +  +G  P
Sbjct: 393 GLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEP 452

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++VTY  LI GLCKAGR+  A  +L+ +   G       Y  +++  F+ ++ K  + + 
Sbjct: 453 DIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLF 512

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKI-GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             M+ KG T D F Y  V        G + EA D++ +M+  G   +  S+  L    C 
Sbjct: 513 REMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCS 572

Query: 300 EGKLEAAYLLLD-EMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
               +    L+D  MEK  F  ++    ++I G  K    + A
Sbjct: 573 LSMEDTLIKLVDLVMEKANFSQNE---VVMIRGFLKIRKFQDA 612



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 134/309 (43%), Gaps = 58/309 (18%)

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           T  +N +LN L           +   +   G  P++ T+NILIK LCKA ++R A  +++
Sbjct: 158 TLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVME 217

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+   G  P+  T+T                                   T++  F++ G
Sbjct: 218 EMSSYGLVPDEKTFT-----------------------------------TLMQGFIEEG 242

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
            +  A    EQM+  G  +  V+ N L++ +CKEG++E A   +DEM  +G       HT
Sbjct: 243 NMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEG------KHT 296

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 385
           + I+            L+ E  NK G   +   YN ++D L   GK+  A+ +   ME+ 
Sbjct: 297 MAIE------------LYNEMKNK-GCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEIS 343

Query: 386 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
              ++  TY++++   CK K++  A ++       G+         ++DGL  S   +EA
Sbjct: 344 GCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEA 403

Query: 443 KKIQSKIRM 451
            ++  ++ M
Sbjct: 404 AQLMDQMIM 412



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 27/340 (7%)

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGR 197
           +  + TP       +L+ L +      ALR+     K   F P    Y  +++ L K G 
Sbjct: 48  LSSNFTPAQ-----LLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGS 102

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYC 256
             + + IL+E+       +       +    +   Y+  L I+  M+ + G   D   Y 
Sbjct: 103 FNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYN 162

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++   V   +LK   +    MV+ G++ D+ ++N LI   CK  ++  A L+++EM   
Sbjct: 163 FLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSY 222

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG----------------FDSNLEAY 360
           G   D+ T T L+ G  + GN+ GA    E M   G                 +  +E  
Sbjct: 223 GLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEA 282

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
              +D +  +GK   AI ++  M+ K    D FTY+ ++ +LC   +L  A  LL     
Sbjct: 283 LSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEI 342

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           SG          ++DG   +    EA++I  ++ +  +S 
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSR 382


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 185/385 (48%), Gaps = 5/385 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +GV PD  ++  L+   CQ   F+    +L  M   G S D  T   ++    R      
Sbjct: 175 MGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRD 234

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
              L   M+EMG PP+V +Y + +  L + G   +A  V ++M+   L P   T   +++
Sbjct: 235 VPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294

Query: 156 GLCKNRYTDNALRMFRGLQK-HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           GLCK  +T+ A R+F  L K   + P + TY ++I G CK G+L  A  +L  + + G A
Sbjct: 295 GLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TYTT++    R   +    E+++ MK +G+  + + Y  +I  F K G++++A   
Sbjct: 355 PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV 414

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +    + G+  D V+Y  LI  +CK+G +  A  L ++M +     D  T+T +I   C+
Sbjct: 415 LRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQ 474

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
              ++ ++   +    IG     + Y  ++    + GK   A+ VFE M     + D  T
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPIT 534

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCL 415
           Y +++  LCK  RL  A  L  + L
Sbjct: 535 YGALISGLCKESRLEEARALFETML 559



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 172/367 (46%), Gaps = 1/367 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+  R E+A+A++    R G   D  T  +++ A+C+   F     +  RM E G  P+V
Sbjct: 192 CQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNV 251

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y + + G  +   +  +  +L+EM+  G+ P+V+++ SL+  L ++G  + A R+F  
Sbjct: 252 VNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLK 311

Query: 138 MI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++      P   T+ +M+ G CK      A  +   + + G  P   TY  LI G C+ G
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGG 371

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  ++ ++   G  PN  TY  I+    +  K +   ++L     +G   D   Y 
Sbjct: 372 SFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYT 431

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G +  A D   QM  +    DI +Y T+I +YC++ ++E +  L D+    
Sbjct: 432 MLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSI 491

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G    K T+T +I G C+ G    A    E M + G   +   Y  ++  L K+ +++ A
Sbjct: 492 GLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEA 551

Query: 377 INVFESM 383
             +FE+M
Sbjct: 552 RALFETM 558



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 1/339 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + V  FC+  R      +    + +G  P+VV Y   +D  C+       + +L  M  
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPD 129
            G+ P+V T+ SLI G  +      +  L  ++++     P+V +Y  ++    + GK  
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +   M+   L P T T+  +++G C+    D A  +   ++  GF+P + TYN +I
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK G+++ A  +L+     G  P+ +TYT ++    +       L++ + M      
Sbjct: 400 GGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCH 459

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+IA + +  +++++    ++ ++ G+     +Y ++I  YC+ GK  +A  +
Sbjct: 460 PDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKV 519

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            + M + G   D  T+  LI GLCK   ++ AR   E M
Sbjct: 520 FERMVQHGCLPDPITYGALISGLCKESRLEEARALFETM 558



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 152/329 (46%), Gaps = 42/329 (12%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +     + +  +CK  +L +AE ++   +  G+ P+  TY  LID +C+  SFD  + 
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE 378

Query: 64  ILNRMREAGISPDVVTYNSLIAG----------------ATRNSL--------------- 92
           ++N+M+  G  P++ TYN++I G                AT   L               
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHC 438

Query: 93  ----LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
               ++ +LDL ++M E    PD+ +Y +++    Q  + +++ ++F   +   L P   
Sbjct: 439 KQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+  M+ G C+   + +AL++F  + +HG +P+ +TY  LI GLCK  RL  AR + + +
Sbjct: 499 TYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETM 558

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM--KRKGYTFDGFGYCTVIAAFVKIG 266
            D    P  +T  T+     R  K  + +  L  +  +++ +  D      ++     + 
Sbjct: 559 LDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADA-----LVRKLSAVD 613

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            L  A+ +++ ++     +D  +Y + IN
Sbjct: 614 NLDAASLFLKNVLDKHYAVDHATYTSFIN 642



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 174/400 (43%), Gaps = 45/400 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK    E+A  + +  ++     P+V TY ++I  YC+         +L RM E G++P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TY +LI G  R      + +L+++M   G  P++++YN+++    + GK  +A +V 
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           +      L P   T+ +++   CK  +   AL +F  + ++   P++ TY  +I   C+ 
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQ 475

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            ++  ++ +  +    G  P   TYT+++                             GY
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIA----------------------------GY 507

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-E 314
           C       ++G+   A    E+MV  G   D ++Y  LI+  CKE +LE A  L + M +
Sbjct: 508 C-------RVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLD 560

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           K    CD  T   L    C+      A   L+ ++K        A + +V +L     +D
Sbjct: 561 KHMVPCD-VTCVTLAYEYCRRDKTTIAVSFLDGLDK---RQQAHAADALVRKLSAVDNLD 616

Query: 375 HAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
            A     NV +     D  TY+S +++  ++ R   AS++
Sbjct: 617 AASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEI 656



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 140/294 (47%), Gaps = 12/294 (4%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIK-GLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
            A  M   L+ HG    + T N +++ GL +      AR     +G     P+A ++  +
Sbjct: 131 EATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGVR---PDARSFRAL 187

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +  C +  +++    +L+AM R+G++ D      V+ AF + GR ++      +MV  G 
Sbjct: 188 VLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGN 247

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-R 342
             ++V+Y   ++  CK G ++ A+ +L+EM  +G + + YTHT LIDGLCK G  + A R
Sbjct: 248 PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFR 307

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNL 398
           L L+ +    +  N+  Y  ++    K+GK+  A      + E     ++ TY++++   
Sbjct: 308 LFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGH 367

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           C+      A +L+      G         A++ G    G  ++A K+   +RMA
Sbjct: 368 CRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV---LRMA 418


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +  FC    +  A ++  + ++ G  P+ +T N LI   C            +++ 
Sbjct: 95  LSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLV 154

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G   D V+Y +LI G  +         LL ++    + PDV  YN++++ L +     
Sbjct: 155 AQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 214

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  V+ +MI   ++P   T+  +++G C   +   A  +   ++     P + T+NILI
Sbjct: 215 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L K G+++ A+ +L  +  +   P+  TY +++   F   + K    +  +M ++G T
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y  +I    K   + EA    E+M    +  DIV+YN+LI+  CK   LE A  L
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M++QG + D Y++TIL+DGLCK+G ++ A+   + +   G+  N+ AY  +++RL K
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            G  D A+++   ME K    D+ T+  ++  L +      A K+L   +  G+
Sbjct: 455 AGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 4/369 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T ++LI+ +C        +++   + + G  P+ +T N+LI G      +  +
Sbjct: 87  GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKA 146

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   D  SY +L++ L + G+     R+ + +    + P    +N ++N 
Sbjct: 147 LYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINS 206

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCKN+   +A  ++  +   G  P++VTY  LI G C  G L+ A  +L E+      PN
Sbjct: 207 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPN 266

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    +  K K    +L+ M +     D F Y ++I  +  +  +K A     
Sbjct: 267 VCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFY 326

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  D+  Y  +IN  CK   ++ A  L +EM+ +    D  T+  LIDGLCK  
Sbjct: 327 SMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNH 386

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           +++ A    + M + G   ++ +Y  ++D L K G+++ A  +F+ +  K    +   Y+
Sbjct: 387 HLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYT 446

Query: 393 SMVHNLCKA 401
            +++ LCKA
Sbjct: 447 VLINRLCKA 455



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 8/401 (1%)

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           A + ++  MR     P    +N++++    N      + L  +    GI PD+ + + L+
Sbjct: 43  ASFNLMLLMRPP---PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILI 99

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           +C         A  VF +++     P   T N ++ GLC       AL     L   GF 
Sbjct: 100 NCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQ 159

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            + V+Y  LI GLCK G  +    +L++L      P+ + Y TI+    +N+      ++
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 219

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            S M  KG + D   Y T+I  F  +G LKEA   + +M    +  ++ ++N LI+   K
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           EGK++ A +LL  M K   + D +T+  LIDG      +K A+     M + G   +++ 
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  +++ L K   +D A+++FE M+    + D  TY+S++  LCK   L  A  L     
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           + G++    +   ++DGL  SG   +AK+I  ++ +AK  H
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL-LAKGYH 439



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 154/310 (49%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + + CK   L  A  +  + I  G+ PDVVTY  LI  +C        +++LN M
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +   I+P+V T+N LI   ++   +  +  LL  M++  I PDV++YNSL+   F + + 
Sbjct: 259 KLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEV 318

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  VF  M    +TP    +  M+NGLCK +  D A+ +F  ++    +P++VTYN L
Sbjct: 319 KHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSL 378

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK   L  A  + K + + G  P+  +YT ++    ++ + +   EI   +  KGY
Sbjct: 379 IDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGY 438

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  +I    K G   EA D   +M   G   D V+++ +I    ++ + + A  
Sbjct: 439 HLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEK 498

Query: 309 LLDEMEKQGF 318
           +L EM  +G 
Sbjct: 499 ILREMIARGL 508


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 189/390 (48%), Gaps = 4/390 (1%)

Query: 21  NRLE---KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           NRL    +A A  +  +  GV P+   +NML+    +     +   + + M   G+ P V
Sbjct: 90  NRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTV 149

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VT+N+L++G  + S L+ +  L   M + GI PDV++Y + +  L + G+  +A  +F++
Sbjct: 150 VTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEE 209

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    L P T     +++  CK       L +   +   G   +LV YN L+ G C+   
Sbjct: 210 MCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRD 269

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           ++ A  I++E+   G  P+ +TYTT++  C +  +    +E+   M  +G   D   Y  
Sbjct: 270 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 329

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I+   K GR  +A   + +M+  G+Q D  +Y  +I+ +CK G ++  +  L EM+ +G
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 389

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
                 T+ ++++G C  G +K A + L  M  IG   N   YN ++D   K GK+    
Sbjct: 390 KNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 449

Query: 378 NVFESME-VKDSFTYSSMVHNLCKAKRLPS 406
            +  +   V D   Y+S+++   K K   S
Sbjct: 450 ELKSAKGMVSDFGVYTSLINEFVKKKSAKS 479



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 3/363 (0%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
            R  N+ +    ++ +L  A  +  + +R GV P VVT+N L+   C+    +    +  
Sbjct: 114 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 173

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M +AGI+PDV TY + I G  +   +  ++++ +EM E G+ P+     +L+    + G
Sbjct: 174 LMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 233

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
                  +  +M    +      +N ++NG C+ R    A  +   ++K G  P+ VTY 
Sbjct: 234 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYT 293

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK G L TA  + +E+ D G A + +TYT ++    +  +      IL  M   
Sbjct: 294 TLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEA 353

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  VI AF K G +K    ++++M   G    IV+YN ++N +C  G+++ A
Sbjct: 354 GLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA 413

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            +LL+ M   G   +  T+ IL+DG CK G ++      E  +  G  S+   Y  +++ 
Sbjct: 414 DMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE---ELKSAKGMVSDFGVYTSLINE 470

Query: 367 LGK 369
             K
Sbjct: 471 FVK 473



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 41/348 (11%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +L+ G+PP+   +N LM  + + GK   A  VF +M+   + P   TFN +++G+CK   
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 163 TDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            +NA    RGL  K G  P++ TY   I+GLCK GR++ A  + +E+ + G  PN +  T
Sbjct: 165 LNNA-NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLT 223

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    +      GLE+   M  +G   D   Y  ++  F ++  +K A D +E+M  D
Sbjct: 224 TLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKD 283

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG------------------------ 317
           G++ D V+Y TLI+  CKEG+L+ A  +  EM  +G                        
Sbjct: 284 GLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDA 343

Query: 318 -----------FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD- 365
                       + D  T+T++ID  CK G++K    HL+ M   G +  +  YN +++ 
Sbjct: 344 ERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNG 403

Query: 366 --RLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKL 410
              LG+    D  +N   ++ V  +  TY+ ++   CK  ++    +L
Sbjct: 404 FCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 451



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 143/323 (44%), Gaps = 38/323 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A  +  +    G+ P+ V    LIDA+C+     AG  +   M   G+  D
Sbjct: 194 LCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKAD 253

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V YN+L+ G  R   +  + D+++EM + G+ PD  +Y +L                  
Sbjct: 254 LVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL------------------ 295

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                            ++G CK    D A+ M + +   G   + VTY  LI GL KAG
Sbjct: 296 -----------------IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAG 338

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  IL E+ ++G  P+  TYT ++    +N   K G + L  M+ KG       Y 
Sbjct: 339 RSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYN 398

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            V+  F  +G++K A   +  M+  GV  + ++YN L++ +CK GK+     L      +
Sbjct: 399 VVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL---KSAK 455

Query: 317 GFECDKYTHTILIDGLCKAGNIK 339
           G   D   +T LI+   K  + K
Sbjct: 456 GMVSDFGVYTSLINEFVKKKSAK 478



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 31/269 (11%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  PE   +N+L++ + ++G+L +AR +  E+   G  P  +T+ T+M    +       
Sbjct: 109 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             +   M + G   D + Y   I    K GR+++A +  E+M   G+  + V   TLI+ 
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +CKEG + A   L  EM  +G + D   +  L++G C+  ++K A               
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAA--------------- 273

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
               N IV+ + KDG               D  TY++++   CK   L +A ++      
Sbjct: 274 ----NDIVEEMRKDGL------------KPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD 317

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            GV +      A++ GL  +G   +A++I
Sbjct: 318 EGVALDDVTYTALISGLSKAGRSVDAERI 346


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 190/377 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K  T + NI +  FCK   L+ A +++ +  +  + PD++TY  LID   +   ++   T
Sbjct: 210 KPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRT 269

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M    I PDV T+NS+I G  +   +  + +++  M+E G+ P+  +YN +M    
Sbjct: 270 LFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYC 329

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+   A R+F  MI   + P   ++  ++NG  + +  D A+++FR + ++G  P +V
Sbjct: 330 LRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIV 389

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T ++L++GL + GR   A+    E+  +GH PN  T+ T++   F+N   +  +     +
Sbjct: 390 TCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKL 449

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +R+    +   Y  VI    K G+L +A    E++   G+  D+++Y  +I+ YC+EG L
Sbjct: 450 ERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  +L +ME  G   D  T+ +++ G  ++  +   +  L+ +    F         +
Sbjct: 510 DEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELL 569

Query: 364 VDRLGKDGKIDHAINVF 380
           +D + +D  + + I  F
Sbjct: 570 MDIIAEDPSLLNMIPEF 586



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 179/361 (49%), Gaps = 8/361 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRL---GVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
            CK    +KA     D +RL   G+  PD   YN++IDA+C+    D   ++LN M++  
Sbjct: 188 LCKKGHTQKA----FDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKN 243

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           I PD++TY SLI G  + S       L  EM+ + I PDV ++NS++  L + GK ++A 
Sbjct: 244 IPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            +   MI   + P   T+N++++G C       A R+F  +   G  P++++Y  LI G 
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            +  ++  A  + +E+  +G  P+ +T + +++  F   + +        M+  G+  + 
Sbjct: 364 VEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNL 423

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           + +CT++  + K G ++EA  +  ++       +I  Y  +IN  CK GKL+ A+   ++
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEK 483

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +   G   D  T+T +I G C+ G +  A+  L  M   G   +   YN IV    +  K
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543

Query: 373 I 373
           +
Sbjct: 544 V 544



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 184/376 (48%), Gaps = 4/376 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD V Y  ++D  C+       + +L  M +    PD   YN +I    ++ +L  +  L
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSL 235

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L+EM +  IPPD+ +Y SL+  L +L + ++   +F +MI  ++ P   TFN +++GLCK
Sbjct: 236 LNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK 295

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               ++A  +   + + G  P  +TYN+++ G C  G++  AR I   + D G  P+ I+
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIIS 355

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT ++      +K    +++   + + G          ++    ++GR + A  + ++M 
Sbjct: 356 YTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQ 415

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G   ++ ++ TL+  Y K G +E A     ++E++  + +   +T +I+GLCK G + 
Sbjct: 416 AAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLD 475

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            A    E +  IG   ++  Y  ++    ++G +D A ++   ME    + D+ TY+ +V
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIV 535

Query: 396 HNLCKAKRLPSASKLL 411
               ++ ++      L
Sbjct: 536 RGFFRSSKVSEMKAFL 551



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 196/455 (43%), Gaps = 40/455 (8%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           +L +  D    + ++++ C     D G+++L    + GI  + VT+ +LI G    + + 
Sbjct: 100 KLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVK 159

Query: 95  CSLDLLDEMLEMGI-PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
            ++ L  +++   I  PD   Y ++M  L + G   +A  + + M  G   P T  +NI+
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIV 219

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK+   D A  +   +++    P+++TY  LI GL K  +    R +  E+     
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNI 279

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  T+ +++    +  K +   EI++ M  KG   +   Y  V+  +   G++  A  
Sbjct: 280 YPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARR 339

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKE--------------------------------- 300
             + M+  G++ DI+SY  LIN Y ++                                 
Sbjct: 340 IFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLF 399

Query: 301 --GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             G+ E A +  DEM+  G   + YTH  L+ G  K G ++ A  H   + +   D+N++
Sbjct: 400 EVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  +++ L K+GK+D A   FE + +     D  TY++M+   C+   L  A  +L   
Sbjct: 460 IYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             +G          +V G   S    E K    +I
Sbjct: 520 EDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 135/287 (47%), Gaps = 5/287 (1%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A  +FR +     +P  V+++ L+K L       +   I +E+       +A   +T+
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +  C    +  LG  +L+   +KG  ++   + T+I       ++K+A    +++V + +
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 284 -QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
            + D V Y T+++  CK+G  + A+ LL  ME+   + D   + I+ID  CK G + GA 
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNL 398
             L  M +     ++  Y  ++D LGK  + +    +F  M       D  T++S++  L
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           CK  ++  A +++   ++ GV   +     V+DG    G    A++I
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 1/332 (0%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CK   +  A  +  + +   + PDVVTY+ LI  +C          + NRM    I+P
Sbjct: 207 SMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINP 266

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +V T++ LI G  +   +  + ++L  M++  +  DV +YNSLM     + + ++A  +F
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M    +TP   +++IM+NG CK +  D A+++F  +      P +VTYN L+ GLCK+
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR   A  ++ E+ D G   N ITY +I+    +N      + +L+ +K KG   D F Y
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTY 446

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    K+GRL +A    E ++  G   +I +Y +LIN +C +G  +    +L +M+ 
Sbjct: 447 TVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKD 506

Query: 316 QGFECDKYTHTILIDGLC-KAGNIKGARLHLE 346
            G   +  T+ ILI  L  K  N K  +L  E
Sbjct: 507 NGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 206/418 (49%), Gaps = 4/418 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD +T N+L++ + Q       +++  ++ + G  PD VT+  LI G      +  +
Sbjct: 88  GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++  G   D  SY +L++ L ++G+   A ++ + +    + P    ++ +++ 
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK++  ++A  ++  +      P++VTY+ LI G C  G+L+ A  +   +      PN
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T++ ++    +  K +    +L+ M +K    D   Y +++  +  + ++ +A     
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   GV  D+ SY+ +IN +CK   ++ A  L +EM  +    +  T+  L+DGLCK+G
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
               A   ++ M+  G  SN+  YN I+D + K+  +D AI +   ++ K    D FTY+
Sbjct: 388 RTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYT 447

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +++ LCK  RL  A K+    L  G         ++++G  + G   E   + SK++
Sbjct: 448 VLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 198/397 (49%), Gaps = 8/397 (2%)

Query: 27  EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG 86
           + ++  G +L    D V+Y  LI+  C+     A   +L R+    + P+VV Y+++I  
Sbjct: 152 DKVVAQGFQL----DQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
             ++ L++ + DL  EM+   I PDV +Y+SL+     +GK   A  +F  MI  ++ P 
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
             TF+I+++G CK      A  +   + K     ++VTYN L+ G C   ++  A+ +  
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            +   G  P+  +Y+ ++    + +     +++   M  K    +   Y +++    K G
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           R   A + +++M   G   +I++YN++++  CK   ++ A +LL +++++G + D +T+T
Sbjct: 388 RTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYT 447

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           +LI+GLCK G +  A+   E +   G+  N+  Y  +++     G  D  + +   M+  
Sbjct: 448 VLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDN 507

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             + ++ TY  ++H+L +      A KLL   +  G+
Sbjct: 508 GCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 4/341 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P  + +  ++    +      +L L  +M   GI PD  + N LM+C  QLG    +  V
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F  ++     P   TF I++ GLC       AL     +   GF  + V+Y  LI GLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G  + A  +L+ +      PN + Y+TI+    +++      ++   M  K  + D   
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y ++I+ F  +G+LK A D   +M++D +  ++ +++ LI+ +CKEGK+  A  +L  M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           K+  + D  T+  L+DG C    +  A+     M + G   ++ +Y+ +++   K   +D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 375 HAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 411
            A+ +FE M  K  F    TY+S+V  LCK+ R   A +L+
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 146/274 (53%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            +I +  FCK  ++ +A+ ++   ++  V  DVVTYN L+D YC     +   ++ N M 
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++PDV +Y+ +I G  +  ++  ++ L +EM    I P+V +YNSL+  L + G+  
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS 390

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +  +M          T+N +L+ +CKN + D A+ +   +++ G  P++ TY +LI
Sbjct: 391 CALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLI 450

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK GRL  A+ + ++L   G++PN  TYT+++        +  GL +LS MK  G  
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI 510

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            +   Y  +I +  +     +A   + +M+  G+
Sbjct: 511 PNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 210/423 (49%), Gaps = 12/423 (2%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +F ++S R +    CT+       C+   + +A+  I + +  G + D  T  ++I A+C
Sbjct: 231 VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 290

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +    +      +++ + G+SP+++ Y+S+I+G  +   +  + +LL+EM++ G  P+V+
Sbjct: 291 EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 350

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
           ++ SL+H L + G  + A R+F  +I  D   P   T+  M++G CK      A  +F  
Sbjct: 351 THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 410

Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           +++ G VP   TY  LI G CKAG    A  +++ + + G  PN  TY +I+    +  +
Sbjct: 411 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 470

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
            +   ++L+   +     DG  Y  +I+   K   + +A  ++ +M   G Q DI  Y T
Sbjct: 471 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 530

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           LI  +C++  ++ +  L DE+ K G    K T+T +I G C+   +  A    + M+  G
Sbjct: 531 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 590

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSAS 408
              +  +Y  ++  L K+ ++D A  ++++M  K       T  ++ +  CK +   SA 
Sbjct: 591 CAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAM 650

Query: 409 KLL 411
            +L
Sbjct: 651 VIL 653



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 201/420 (47%), Gaps = 5/420 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+TR++N  +    +   +E A  +  +    GV PD  TY  +I  YC+  +       
Sbjct: 207 LTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRW 266

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +  M E G   D  T   +I      SL++ ++    ++ +MG+ P++ +Y+S++  L +
Sbjct: 267 ICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCK 326

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELV 183
            G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F  L +   + P + 
Sbjct: 327 RGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVH 386

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  +I G CK  +L  A  + + + + G  PN  TYTT++    +   +    E++  M
Sbjct: 387 TYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELM 446

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G+  +   Y +++    K GR +EA   +     + ++ D V+Y  LI+  CK   +
Sbjct: 447 SNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM 506

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A + L++M K GF+ D + +T LI   C+   +K +    + + K+G     E Y  +
Sbjct: 507 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 566

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    ++ K+  A+  F+ M       DS +Y +++  LCK  RL  A +L  + +  G+
Sbjct: 567 ICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 626



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 38/357 (10%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MR  G+       N +I  A    L+  + ++ DEM   G+ PD  +Y  ++    + G 
Sbjct: 200 MRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN 259

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA+R   +M+        AT  +++   C+    + A+  F  + K G  P L+ Y+ 
Sbjct: 260 VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 319

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G ++ A  +L+E+  +G  PN  T+T+                ++  + +KG
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS----------------LIHGLCKKG 363

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +T   F        F+K+ R            +D  + ++ +Y  +I+ YCKE KL  A 
Sbjct: 364 WTERAF------RLFLKLIR------------SDNYKPNVHTYTAMISGYCKEEKLSRAE 405

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +L + M++QG   +  T+T LIDG CKAGN   A   +E M+  GF  N   YN IVD L
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465

Query: 368 GKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            K G+ + A  +    F++    D  TY+ ++   CK   +  A   L    K G +
Sbjct: 466 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 522



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 12/322 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK    E+A  + +  IR     P+V TY  +I  YC+         +  RM+E G+ P
Sbjct: 359 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA---- 131
           +  TY +LI G  +    S + +L++ M   G  P+  +YNS++  L + G+ +EA    
Sbjct: 419 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 478

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N  FQ+ I  D      T+ I+++  CK    + AL     + K GF P++  Y  LI  
Sbjct: 479 NTGFQNQIEAD----GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 534

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C+   ++ +  +  E+   G AP   TYT+++    R +K  L ++    M   G   D
Sbjct: 535 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 594

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I+   K  RL EA    + M+  G+    V+  TL   YCK     +A ++L+
Sbjct: 595 SISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 654

Query: 312 EMEKQGFECDKYTHTILIDGLC 333
            + K+ +   +  HT LI  LC
Sbjct: 655 RLNKKLW--IRTVHT-LIRKLC 673



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 7/351 (1%)

Query: 5   LSTRLLNIC--VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           LS  L+N    +   CK   +++A  ++ + ++ G  P+V T+  LI   C+    +  +
Sbjct: 310 LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 369

Query: 63  TI-LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-- 119
            + L  +R     P+V TY ++I+G  +   LS +  L + M E G+ P+  +Y +L+  
Sbjct: 370 RLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 429

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           HC  + G   +A  + + M      P T T+N +++GLCK    + A ++     ++   
Sbjct: 430 HC--KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            + VTY ILI   CK   +  A   L ++   G  P+   YTT++    R    K   ++
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 547

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              + + G       Y ++I  + +  ++  A  + ++M   G   D +SY  LI+  CK
Sbjct: 548 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCK 607

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           E +L+ A  L D M  +G    + T   L    CK  +   A + LE +NK
Sbjct: 608 ESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK 658


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 191/436 (43%), Gaps = 39/436 (8%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   C    +EK   +I      G +P+ V YN+LID YC+      G  +L  M   
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ P VVTY +L++   R   L     LL EM E  +PP+V  YNS++  L +     +A
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             V + M  G   P   TF+ +++GLC+      A R+ R   +    P L +Y  LI G
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAIT-------------------------------- 219
            C  G +  A  +L E+ + GH P+ +T                                
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503

Query: 220 ---YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y  ++    + +       ++  M  +    D + Y T+I  F++   L EA    E
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE 563

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G+  D+V YN +I  YC+ G +  A   +  M K G   D++T+T LI G  K G
Sbjct: 564 FMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQG 623

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYS 392
           NI GA   L  M K     N+ AY+ +++   K G  D A  +F SME +  F    TY+
Sbjct: 624 NISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYT 683

Query: 393 SMVHNLCKAKRLPSAS 408
            ++ +L K  ++  A+
Sbjct: 684 ILIGSLFKKDKVVRAA 699



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 181/383 (47%), Gaps = 4/383 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LEK  +++ +     + P+V  YN +IDA C+  S      +L +M   G  PD +T+++
Sbjct: 345 LEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFST 404

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI+G  +   +  +  LL E     + P++ SY SL+H     G+   A+ +  +M+   
Sbjct: 405 LISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERG 464

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
            TP   TF  +++GL        AL +   +     +P+   YN+LI GLCK   L  AR
Sbjct: 465 HTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAAR 524

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +++E+ +    P+   YTT++    RN       +I   M++KG   D  GY  +I  +
Sbjct: 525 NLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGY 584

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            + G + EA + M  M   G   D  +Y TLI  Y K+G +  A  LL +M K+  + + 
Sbjct: 585 CQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNV 644

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
             ++ LI+G CK G+   A      M   G   N+  Y  ++  L K  K+  A   FE 
Sbjct: 645 VAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEY 704

Query: 383 MEV----KDSFTYSSMVHNLCKA 401
           M +     + +T  S+V  LC +
Sbjct: 705 MLLNQCSPNDYTLHSLVTGLCNS 727



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 162/343 (47%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + ++ N  +   CK     +A  ++      G  PD +T++ LI   CQ         +L
Sbjct: 363 NVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLL 422

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
                  ++P++ +Y SLI G      +  + +LL EM+E G  PDV ++ +L+H L   
Sbjct: 423 RETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVA 482

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  EA  V + M    L P    +N++++GLCK +    A  +   + +    P+   Y
Sbjct: 483 GQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVY 542

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI G  +   L  AR I + +   G  P+ + Y  ++K   +       +E +S M++
Sbjct: 543 TTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRK 602

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D F Y T+I  + K G +  A   +  M+    Q ++V+Y++LIN YCK G  +A
Sbjct: 603 VGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDA 662

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           A  L   ME QG   +  T+TILI  L K   +  A ++ EYM
Sbjct: 663 AECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYM 705



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 4/321 (1%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A +++ +M+  +      +  +M+ GLC     +  L++       G VP  V YN+L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C+ G +     +L E+   G  P  +TY T+M    R    +    +LS M+ +  
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y +VI A  K     +A   ++QM   G   D ++++TLI+  C+EG+++ A  
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL E  +     +  ++T LI G C  G +  A   L  M + G   ++  +  ++  L 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             G++  A+ V E M  +    D+  Y+ ++  LCK K LP+A  L+   L+  V   K 
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++DG   +    EA+KI
Sbjct: 541 VYTTLIDGFIRNESLDEARKI 561



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 168/413 (40%), Gaps = 74/413 (17%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           + G  ++     AG  P+ V YN LI G  R   +   + LL EM   G+ P V +Y +L
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           M  L + G  ++   +  +M                                   ++   
Sbjct: 336 MSWLGRKGDLEKIASLLSEM-----------------------------------RERRL 360

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNR------ 231
            P +  YN +I  LCK      A  +LK++   G  P+AIT++T++   C   R      
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 232 ------KYKL----------------------GLEILSAMKRKGYTFDGFGYCTVIAAFV 263
                 +++L                         +L  M  +G+T D   +  +I   V
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
             G++ EA    E+M    +  D   YN LI+  CK+  L AA  L++EM +Q    DKY
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            +T LIDG  +  ++  AR   E+M + G   ++  YN ++    + G ++ A+    +M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600

Query: 384 ----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
                + D FTY++++    K   +  A  LL   +K   +    A  ++++G
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLING 653



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 144/334 (43%), Gaps = 20/334 (5%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +   CK   L  A  +I + +   V PD   Y  LID + +  S D    I   M
Sbjct: 506 IYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFM 565

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + GI PDVV YN++I G  +  +++ +++ +  M ++G  PD ++Y +L+    + G  
Sbjct: 566 EQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNI 625

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  +  DM+     P    ++ ++NG CK   TD A  +F  ++  G  P ++TY IL
Sbjct: 626 SGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTIL 685

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L K  ++  A    + +  +  +PN  T  +++     +        I+S+      
Sbjct: 686 IGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMA-----SIISS------ 734

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                 +C+        G L    D    +V D       +YN +I   C    L  A  
Sbjct: 735 ------HCSSTVNLHGKGAL---LDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALD 785

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           L ++M  +G++ D  T   L+ G C  G  +  R
Sbjct: 786 LKNKMANKGYKPDSATFLSLLYGFCSVGKSREWR 819


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 223/492 (45%), Gaps = 44/492 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+S  L    +  +C    + KA  I  + +R G++P  VTY +LI    +    +  Y 
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYE 338

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +MR+ G+ P    +N +I G   + L   ++ L  EM + GI PD ++YN L+H L 
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLC 397

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  K  EA  +++ M    + P   T++ +L   C N   D A++++  +   GF P +V
Sbjct: 398 QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSA 242
           TY  L+KG         A  +L E+  +G + N  TY T++   C   R  ++G E+L  
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG-EMLKR 516

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            + +G+      Y ++I  F+K G +  A    +QM   G+  +IV+Y + I+ YCK   
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA--------------------- 341
            + A  +L+++  +G   D   +  LI G C+ GN+  A                     
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636

Query: 342 ---------------RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 383
                          RL+ E M K G D +   Y  ++D   KDG +  A+ ++  M   
Sbjct: 637 FITGYKNLKMMEEALRLY-EKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695

Query: 384 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             + D  T++++ H LC+   +  A KLL    +  +R        +++G   +G  +EA
Sbjct: 696 GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEA 755

Query: 443 KKIQSKIRMAKI 454
            ++  ++   KI
Sbjct: 756 FRLHDEMLERKI 767



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 189/444 (42%), Gaps = 40/444 (9%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D   +++++ A  +   +D    + + M  + I PD    +  IA   +    + +L +L
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M + G  P  +++NS++  L + G+ +EA  +  +++             +++G C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           R    AL +F    + G VP  VTY +LI+G  + G    A  + +++ D G  P+   +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++K    ++ +K  + +   M   G   D F Y  +I    +  +++EA +  E+M  
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 281 DGVQLDIVSYNTLINLYCKEG-----------------------------------KLEA 305
            GV+  IV+Y++L+  YC  G                                     + 
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           AY LL EM++ G  C+ YT+  LI+GLC  G +      L+     GF      YN I++
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K G +  A  V++ M  K    +  TY+S +   CK      A K+L      G+R 
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594

Query: 422 LKSAQKAVVDGLRHSGCRREAKKI 445
             +A  +++ G    G    A ++
Sbjct: 595 DIAAYNSLIFGFCQEGNMSHALQV 618



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 17/339 (5%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
            +KA A++ +  + GV  +  TYN LI+  C          +L R    G  P  +TYNS
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           +I G  +  ++  +  +  +M   GIPP++ +Y S +    +    D A ++  D+ C  
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L P  A +N ++ G C+     +AL++   + K G +P +  YN  I G      +  A 
Sbjct: 592 LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            + +++   G   +  TYTT++    ++      L++ S M  KG   D   +  +    
Sbjct: 652 RLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            + G + +A   +++M    ++ +++ YN LIN Y + GKL+ A+ L DEM ++    D 
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            T+ IL+                  M  +G DS ++A N
Sbjct: 772 TTYDILVG-----------------MKSLGSDSPIDAEN 793



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 5/370 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++PD  +   L+A   R++  + +L LL EM   G P D W ++ +M   F+ G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A R+F +M   ++ P     ++ +  LCK R  + AL + R +Q  GFVP   T+N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++  L K GR+  A  I  EL  +G   + +  TT+M      R+ +  L+I     R G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  +I    + G  ++A +   QM   G+      +N +I     +   + A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D +T+ ILI  LC+   I+ A    E MN+ G    +  Y+ ++   
Sbjct: 373 SLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
             +G +D A+ ++  M  K    +  TY++++           A  LL    ++GV    
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 424 SAQKAVVDGL 433
                +++GL
Sbjct: 492 YTYNTLINGL 501



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 105/208 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK +  + A  ++ D    G+ PD+  YN LI  +CQ  +      +L  M + G+ P+
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPN 630

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +  YNS I G     ++  +L L ++M++ GI  D  +Y +L+    + G    A +++ 
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYS 690

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+     P   TF  + +GLC+N   D+A ++   + +    P ++ YN+LI G  + G
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIM 224
           +L+ A  +  E+ +    P+  TY  ++
Sbjct: 751 KLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 91/179 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+   +  A  +++  ++ G+LP++  YN  I  Y      +    +  +M +
Sbjct: 600 NSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIK 659

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  D  TY +LI G +++  ++ +L L  EM+  G  PD  ++ +L H L + G  D+
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A ++  +M   D+ P    +N+++NG  +N     A R+   + +   +P+  TY+IL+
Sbjct: 720 ARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 53/115 (46%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T      +  F K   +  A  +  + +  G +PD +T+  L    C+    D    +
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           L+ M    I P+V+ YN LI G  RN  L  +  L DEMLE  I PD  +Y+ L+
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 198/386 (51%), Gaps = 1/386 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C +++  +A   +   ++LG  PD+VT+  L++ YC +   +    + +++  
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+VVTY +LI    +N  L+ +++L ++M   G  P+V +YN+L+  L ++G+  +
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + +DM+   + P   TF  +++   K      A  ++  + +    P++ TY  LI 
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G L  AR +   +  +G  PN + YTT++    ++++ + G++I   M +KG   
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I  +  +GR   A +   QM +     DI +YN L++  C  GK+E A ++ 
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M K+  + +  T+TI+I G+CK G ++ A      +   G   N+  Y  ++    + 
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVH 396
           G I  A ++F+ M+ +D F  +  V+
Sbjct: 482 GLIHEADSLFKKMK-EDGFLPNESVY 506



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 199/416 (47%), Gaps = 4/416 (0%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP ++ +  L+    +   +D   ++  +M+  GI P + T N ++     +S    +  
Sbjct: 80  LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
            L +M+++G  PD+ ++ SL++      + ++A  +F  ++     P   T+  ++  LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           KNR+ ++A+ +F  +  +G  P +VTYN L+ GLC+ GR   A W+L+++      PN I
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T+T ++    +  K     E+ + M +     D F Y ++I      G L EA      M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             +G   + V Y TLI+ +CK  ++E    +  EM ++G   +  T+T+LI G C  G  
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 394
             A+     M+      ++  YN ++D L  +GK++ A+ +FE M  ++      TY+ +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +  +CK  ++  A  L  S    G++        ++ G    G   EA  +  K++
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 154/337 (45%), Gaps = 4/337 (1%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           +Y  ++     N   + +LDL   M+     P +  +  L+  + ++ + D    +F+ M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               + P   T NI+++ +C +     A      + K GF P+LVT+  L+ G C   R+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +  ++   G  PN +TYTT+++C  +NR     +E+ + M   G   +   Y  +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    +IGR  +A   +  M+   ++ +++++  LI+ + K GKL  A  L + M +   
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D +T+  LI+GLC  G +  AR     M + G   N   Y  ++    K  +++  + 
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +F  M     V ++ TY+ ++   C   R   A ++ 
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 180/357 (50%), Gaps = 4/357 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L++ C    CK   +EKA+ +  +  + G++ +  TY +LI    +      G+ +  
Sbjct: 202 TTLIDGC----CKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M+E G+ P++ TYN ++    ++     +  L DEM E G+  ++ +YN+L+  L +  
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREM 317

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EAN+V   M    + P   T+N +++G C       AL + R L+  G  P LVTYN
Sbjct: 318 KANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           IL+ G CK G    A  ++KE+ + G  P+ ITYT ++    R    +  +++ S M+  
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T D   Y  +I  F   G++ EA+   + MV   ++ + V YNT++  YCKEG    A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRA 497

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             L  EME++    +  ++  +I+ LCK    K A   +E M   G D +    N I
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 4/383 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV ++ ++I   C+    +  + +L  +RE G SP+VV Y +LI G  +   +  + DL 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM + G+  + W+Y  L+H LF+ G   +   +++ M    + P   T+N ++N  CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
             T +A ++F  +++ G    +VTYN LI GLC+  +   A  ++ ++   G  PN ITY
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T++       K    L +   +K +G +     Y  +++ F K G    A   +++M  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++   ++Y  LI+ + +   +E A  L   ME+ G   D +T+++LI G C  G +  
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVH 396
           A    + M     + N   YN +V    K+G    A+ +F  ME K+      +Y  M+ 
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            LCK ++   A  L+   + +G+
Sbjct: 522 VLCKERKSKEAEGLVEKMIDTGI 544



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 38/394 (9%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISP----------------------------- 75
           Y ++I+AY Q  S D+  +  N M + G  P                             
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 76  -----DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
                DV ++  +I G      +  S DLL E+ E G  P+V  Y +L+    + G+ ++
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M    L     T+ ++++GL KN        M+  +Q+ G  P L TYN ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CK GR + A  +  E+ + G + N +TY T++    R  K     +++  MK  G   
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F  +G+L +A      + + G+   +V+YN L++ +CK+G    A  ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EME++G +  K T+TILID   +  N++ A      M ++G   ++  Y+ ++      
Sbjct: 397 KEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIK 456

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           G+++ A  +F+ M  K    +   Y++MV   CK
Sbjct: 457 GQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCK 490



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 7/336 (2%)

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF-QDM 138
           Y  +I    ++  L  S+   +EM++ G  P    +N+L+  +      ++  R F +  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I  DL     +F I++ G C+    + +  +   L++ GF P +V Y  LI G CK G +
Sbjct: 157 IKVDLD--VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A+ +  E+G  G   N  TYT ++   F+N   K G E+   M+  G   + + Y  V
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    K GR K+A    ++M   GV  +IV+YNTLI   C+E K   A  ++D+M+  G 
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T+  LIDG C  G +  A      +   G   +L  YN +V    K G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 379 VFESME---VKDS-FTYSSMVHNLCKAKRLPSASKL 410
           V + ME   +K S  TY+ ++    +   +  A +L
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 223/473 (47%), Gaps = 45/473 (9%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG--I 73
            C A R ++A  +++  +  L  +PD ++YN +I + C          ++ RM + G   
Sbjct: 169 LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC 228

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVV++N++I G  +   +S + +L +EM++ G+ PDV +YNS++  L +    D+A  
Sbjct: 229 SPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEF 288

Query: 134 VFQDMICGDLTPCTATFNIMLNGL-CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           V + M+   + P   T+N +++G  C   + ++A +MFR +   G +P+ VT++  +  L
Sbjct: 289 VLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESA-KMFRKMTSKGLIPDTVTFSSFMSSL 347

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY------------------- 233
           CK GR + A  I + +   GH P+ ++Y+ ++       ++                   
Sbjct: 348 CKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNC 407

Query: 234 -----------KLGLE-----ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
                      K G+      + + M+ +G   +   Y T+I+AF ++GRL +A +   Q
Sbjct: 408 HCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQ 467

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH-TILIDGLCKAG 336
           M++ G++ +   Y++LI+ +C  G L  A   + EM  +G         + +I  LC  G
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
            +  A+     +  IG    +  +N ++D     GK++ A  V ++M       D  T +
Sbjct: 528 RVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNN 587

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++V   CK+ ++     L    L   V+        V+DGL  +G    AKK+
Sbjct: 588 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 197/438 (44%), Gaps = 8/438 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
             L+ R   I +   C+A R +   A +   +R G+    +     +   C     D   
Sbjct: 120 APLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV 179

Query: 63  TIL-NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLM 119
            +L +RM E    PD ++YN++I     +S    +LD++  M + G    PDV S+N+++
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 239

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
           H  F+ G+  +A  +F +M+   + P   T+N +++ LCK R  D A  + R +   G  
Sbjct: 240 HGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P+ VTYN +I G   +G  + +  + +++   G  P+ +T+++ M    ++ + K   EI
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              M  KG+  D   Y  ++  +   GR  +  +    M   G+  +    N LI+ + K
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G ++ A L+  EM+ QG   +  T++ LI   C+ G +  A      M  IG + N   
Sbjct: 420 RGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAV 479

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           Y+ ++      G +  A      M  K     +   +SS++H+LC   R+  A  +    
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539

Query: 415 LKSGVRILKSAQKAVVDG 432
           +  G R       +++DG
Sbjct: 540 IHIGDRPTIVTFNSLIDG 557



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 209/519 (40%), Gaps = 110/519 (21%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  F K   + KA  +  + ++ GV+PDV TYN ++DA C+  + D    +L +M 
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD VTYN++I G + +     S  +  +M   G+ PD  +++S M  L + G+  
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC------------------------------- 158
           +A  +FQ M      P   +++I+L+G                                 
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 159 ----KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
               K    D A+ +F  +Q  G  P +VTY+ LI   C+ GRL  A     ++   G  
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-----------------------TFD 251
           PN   Y +++     +       E +S M  KG                          D
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 252 GFG-------------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            F              + ++I  +  +G++++A   ++ MV+ G++ D+V+ NTL++ YC
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYC 594

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K GK++   +L  EM  +  +    T+ I++DGL +AG    A+     M   G   +++
Sbjct: 595 KSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDID 654

Query: 359 AYNCIVDRLGKDGKIDHAINVFESM--------------------------EVKDSF--- 389
            Y  ++  L ++   D AI +F  +                          E  D F   
Sbjct: 655 TYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAI 714

Query: 390 ----------TYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                     TY  M+ NL K   +  A  +  S  KSG
Sbjct: 715 STSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 137/287 (47%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + C   R+  A+ +    I +G  P +VT+N LID YC     +  + +L+ M   GI P
Sbjct: 522 SLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 581

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVVT N+L++G  ++  +   L L  EML   + P   +YN ++  L + G+   A ++F
Sbjct: 582 DVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMF 641

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI         T+ I+L GLC+N  TD A+ +F  L       ++   N +I  L K 
Sbjct: 642 HEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKV 701

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A  +   +  SG  PN  TY  +++   +    +    + S+M++ G        
Sbjct: 702 RRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 761

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
             +I   ++ G + +A  YM ++    + L+  + + L++L+  +GK
Sbjct: 762 NDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 178/427 (41%), Gaps = 43/427 (10%)

Query: 1   MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTY-------- 45
           MF K++++ L     TF       CK  R + AE I       G +PD+V+Y        
Sbjct: 324 MFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYA 383

Query: 46  ---------------------------NMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
                                      N+LI A+ +    D    +   M+  G+ P+VV
Sbjct: 384 TEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVV 443

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY++LI+   R   L+ +++   +M+ +GI P+   Y+SL+H     G   +A     +M
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 139 ICGDL-TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           +   L  P    F+ +++ LC      +A  +F  +   G  P +VT+N LI G C  G+
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +L  +   G  P+ +T  T++    ++ K   GL +   M  K        Y  
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           V+   ++ GR   A     +M+  G  +DI +Y  L+   C+    + A  L  ++    
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + D      +I+ L K    + A      ++  G   N+  Y  ++  L K+G ++ A 
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 378 NVFESME 384
            +F SME
Sbjct: 744 TMFSSME 750



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 1/365 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +NI +    K   +++A  +  +    GV P+VVTY+ LI A+C+           ++M 
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP-PDVWSYNSLMHCLFQLGKP 128
             GI P+   Y+SLI G   +  L  + + + EM+  G+  P++  ++S++H L   G+ 
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  VF  +I     P   TFN +++G C     + A  +   +   G  P++VT N L
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL 589

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G CK+G++     + +E+      P  +TY  ++    R  +     ++   M   G 
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGT 649

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  ++    +     EA     ++     + DI   NT+IN   K  + E A  
Sbjct: 650 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAND 709

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L   +   G   +  T+ ++I  L K G+++ A      M K G   +    N I+  L 
Sbjct: 710 LFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 769

Query: 369 KDGKI 373
           + G I
Sbjct: 770 QKGDI 774



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 48/443 (10%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           NR+ + EA    G R+  L  V TY +L+D  C+    D G   + R+  AG+    +  
Sbjct: 108 NRICREEA----GPRVAPL-TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQA 162

Query: 81  NSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
            + +           ++D LL  M E+   PD  SYN++                     
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTV--------------------- 201

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF--VPELVTYNILIKGLCKAGR 197
                         +  LC +  +  AL M + + K G    P++V++N +I G  K G 
Sbjct: 202 --------------IKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGE 247

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +  A  +  E+   G  P+  TY +I+    + R       +L  M  KG   DG  Y  
Sbjct: 248 VSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNA 307

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  +   G  KE+     +M + G+  D V++++ ++  CK G+ + A  +   M  +G
Sbjct: 308 IIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
              D  +++IL+ G    G           M   G  SN    N ++    K G +D A+
Sbjct: 368 HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAM 427

Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            VF  M+ +    +  TYS+++   C+  RL  A +     +  G+    +   +++ G 
Sbjct: 428 LVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGF 487

Query: 434 RHSGCRREAKKIQSKIRMAKISH 456
              G   +AK+  S++ M+K  H
Sbjct: 488 CMHGDLVKAKEFISEM-MSKGLH 509



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 112/232 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +CK+ +++    +  + +   V P  VTYN+++D   +     A   + + M +
Sbjct: 587 NTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMID 646

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G + D+ TY  L+ G  RN L   ++ L  ++  M    D+   N++++ L+++ + +E
Sbjct: 647 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREE 706

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN +F  +    L P  +T+ +M+  L K    + A  MF  ++K G  P     N +I+
Sbjct: 707 ANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIR 766

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            L + G +  A + + ++  +  +  A T + +M       K++  ++ L A
Sbjct: 767 MLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFLPA 818


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 212/449 (47%), Gaps = 7/449 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R++ A  +  +   +   PDVVTY +++  YC     +    +L+ M  
Sbjct: 257 NILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + V Y S+IA       +S ++ ++++M+  G+  D   + ++M    + G    
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M    L     T+  ++NGLC+      A R+ + ++  G   + VTY +LI 
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A  +  ++      PN +TYT +     +        E+L  M  KG   
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y ++I    K G L++A   M  M   G++ D+ +Y T+I   C+  +L+ A+ LL
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G +    T+ +L++G C +G ++G +  LE+M +     N   YN ++ +   +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +     +++ M     V +  TY+ ++   CKA+ +  A       ++ G R+  S+ 
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A++  L       EA+++  K+R  +++
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLT 702



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 26/426 (6%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQF----VSFD------AGYTILNRMREAGISP 75
           A AI++  +R    P        I  Y  F    VSFD          +L R+R+ GISP
Sbjct: 166 ARAILVRALRFPS-PHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSAPLLLRLRQYGISP 224

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
              + N+++        L  ++ L  E+ E     +  SYN L+  L   G+  +A+++F
Sbjct: 225 SPESCNAVLCRLP----LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLF 276

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      P   T+ IM++G C     + A+++   +   G     V Y  +I  LC  
Sbjct: 277 DEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDE 333

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  A  +++++   G   +A  +TT+M    R             M+++G   DG  Y
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    + G LKEA   +++M   G+ +D V+Y  LI+ YCK GK+  A+L+ ++M +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T+T L DGLCK G++  A   L  M   G + N+  YN +++ L K G ++ 
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+     M+      D +TY++++  LC++K L  A  LL   L  G++        +++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573

Query: 432 GLRHSG 437
           G   SG
Sbjct: 574 GFCMSG 579



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 1/385 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C   ++  A  ++ D +  GV+ D   +  ++  +C+     A     + M++ G+
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           + D VTY +LI G  R   L  +  +L EM + G+  D  +Y  L+    ++GK  EA  
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M+   +TP   T+  + +GLCK      A  +   +   G    + TYN LI GLC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG L  A   + ++ ++G  P+  TYTTI+    ++++      +L  M  KG      
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  F   GR++     +E M+   +  +  +YN+L+  YC E  +++   +   M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             Q    ++ T+ ILI G CKA N+K A      M + GF     +YN ++  L K  K 
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 374 DHAINVFESMEVKDSFTYSSMVHNL 398
             A  +FE M  K+  T    V+N 
Sbjct: 687 TEARRLFEKMR-KERLTAEPDVYNF 710



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 140/297 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++ +A  +    ++  V P+VVTY  L D  C+     A   +L+ M   G+  +
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYNSLI G  +   L  ++  + +M E G+ PDV++Y +++  L Q  + D A+ + Q
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T+N+++NG C +   +   R+   + +    P   TYN L+K  C   
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +++   I K +      PN  TY  ++K   + R  K  L   S M  KG+      Y 
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +I    K  +  EA    E+M  + +  +   YN  I+L   E  LE+   L DE+
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D   Q+  +  + +  SYN L+   C  G+++ A+ L DEM       D  T+ I++ G 
Sbjct: 239 DEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGY 295

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
           C    ++ A   L  M   G + N  AY  ++  L  +G++  A+ V E M     V D+
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDA 355

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +++++   C+   L +A        K G+        A+++GL  +G  +EA+++
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FC + R+E  + ++   +   + P+  TYN L+  YC   +  +   I   M  
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN LI G  +   +  +L    EM+E G      SYN+L+  L +  K  E
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 131 ANRVFQDMICGDLTPCTATFNIMLN 155
           A R+F+ M    LT     +N  ++
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYID 713


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 202/419 (48%), Gaps = 5/419 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST+ LN  +        +E AE + ++  + GV PD V++ +++ A C           L
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWL 247

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M E G   D  T   +I    +   ++  +    +M+EMG+ P+V ++ +L++ L + 
Sbjct: 248 NAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQ 307

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F  L +  G+ P + T
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I G CK  +L  A  +L  + + G  PN  TYTT++    +   +    E++  M 
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           ++G++ + + Y  +I    K G L EA   + ++   G+Q D V+Y  L++++C++    
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            + +  ++M K GF  D +++T LI   C+   +K +    E    +G     + Y  ++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               + G    A+ +F+ M       DS TY +++  LCK  +L  A  L  + +  G+
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 38/338 (11%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+     T N ++  A    L+  + ++  EM + G+ PD  S+  ++     +G
Sbjct: 179 EMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA +    M+        AT  ++++  C+  Y +  +  F  + + G  P ++ + 
Sbjct: 239 RVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK G ++ A  +L+E+   G  PN  T+TT                ++  + +K
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT----------------LIDGLCKK 342

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+T   F        F+K+ R            +DG + ++ +Y  +IN YCKE KL  A
Sbjct: 343 GWTEKAF------RLFLKLVR------------SDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            +LL  M++QG   +  T+T LIDG CK GN   A   ++ M K GF  N+  YN I+D 
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L K G +D A  +   + V     D  TY+ ++   C+
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCR 482



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 4/328 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK    EKA  + +  +R  G  P+V TY  +I+ YC+    +    +L+RM+E G+ P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TY +LI G  +      + +L+D M + G  P++++YN+++  L + G  DEA R+ 
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +    L     T+ I+++  C+   T+ +L  F  + K GF P++ +Y  LI   C+ 
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQ 518

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            +++ +  + +E    G  P   TYT+++    R     L +++   M   G   D   Y
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I+   K  +L +A +  + M+  G+    V+  TL   YCK+     A  +LD +EK
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARL 343
           + +     T   L+  LC  G +  A L
Sbjct: 639 RQW---IRTVNTLVRKLCSEGKLDMAAL 663



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 5/302 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           M+    +N     A+ M   +Q  G V    T N ++      G +  A  +  E+   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            +P+ +++  ++  C    +     + L+AM  +G+  D      +I AF + G +    
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            Y  +MV  G+  +++++  LIN  CK+G ++ A+ LL+EM ++G++ + YTHT LIDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 333 CKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           CK G  + A RL L+ +   G+  N+  Y  +++   K+ K++ A  +   M+    V +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + TY++++   CK      A +L+    K G         A++DGL   G   EA ++ +
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 448 KI 449
           K+
Sbjct: 460 KV 461



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 67/289 (23%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK     +A  ++    + G  P++ TYN +ID  C+  S D  Y +LN++   G+  D 
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY  L++   R +  + SL   ++ML++G  PD+ SY +L+    +  +  E+ R+F++
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEE 530

Query: 138 ---------------MICG--------------------DLTPCTATFNIMLNGLCKNRY 162
                          MICG                       P + T+  +++GLCK   
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590

Query: 163 TDNALRMFRGLQKHGFVP--------------------------------ELVTYNILIK 190
            D+A  ++  +   G  P                                 + T N L++
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVR 650

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            LC  G+L  A     +L D     N +T    M  C+ + KY L  E+
Sbjct: 651 KLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSEL 699


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 214/463 (46%), Gaps = 17/463 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  + ++CK   ++ A++     ++ G++P V ++N+LI+  C   S      + + M 
Sbjct: 244 FNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 303

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD VTYN L+ G     ++S + +++ +ML+ G+ PDV +Y  L+    QLG  D
Sbjct: 304 KHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNID 363

Query: 130 EANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
               + +DM+  G        +++ML+GLCK    D AL +F  L+ +G  P+LV Y+I+
Sbjct: 364 MGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIV 423

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLCK G+   A  +  E+      PN+ T   IM    +         +L ++   G 
Sbjct: 424 IHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGD 483

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           T D   Y  VI  + K G ++EA +  +  +  G+  ++ ++N+LI  YCK   +  A  
Sbjct: 484 TLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARK 543

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +LD ++  G      ++T L+D     G+IK        M   G       Y+ I   L 
Sbjct: 544 ILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLC 603

Query: 369 KDGKID---------------HAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKLLL 412
           +  K++               H +   ES  +  D  TY++++  LC+ K L  A +L  
Sbjct: 604 RGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFK 663

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
                 +    +    ++D L   GC R+A +    ++   +S
Sbjct: 664 KMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVS 706



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 171/340 (50%), Gaps = 9/340 (2%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY++++ G  R   L  ++  L       I P V S+NS+M    +LG  D A   F  +
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTV 267

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +   L P   + NI++NGLC       AL +   + KHG  P+ VTYNIL+KG    G +
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMI 327

Query: 199 RTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDG-FGY 255
             A  +++++ D G +P+ ITYT ++  +C   N    +GL +L  M  +G+       Y
Sbjct: 328 SGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLILLKDMLSRGFELKSIIPY 385

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +++   K GR+ EA      +   G+  D+V+Y+ +I+  CK GK + A  + DEM  
Sbjct: 386 SVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCY 445

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T   ++ GLC+ G +  AR  L+ +   G   ++  YN ++D   K G I+ 
Sbjct: 446 KRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEE 505

Query: 376 AINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           A+ +F    ES    +  T++S+++  CK + +  A K+L
Sbjct: 506 ALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKIL 545



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 201/455 (44%), Gaps = 22/455 (4%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V  F     +  A  +I D +  G+ PDV+TY +L+   CQ  + D G  +L  M  
Sbjct: 315 NILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLS 374

Query: 71  AGIS-PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            G     ++ Y+ +++G  +   +  +L L  ++   G+ PD+ +Y+ ++H L +LGK D
Sbjct: 375 RGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFD 434

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A RV+ +M    + P + T   ++ GLC+      A  +   L   G   +++ YNI+I
Sbjct: 435 MAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVI 494

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K+G +  A  + K   +SG  PN  T+ +++    + +      +IL  +K  G  
Sbjct: 495 DGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLV 554

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y T++ A+   G +K   +   +M  +G+    V+Y+ +    C+  KLE    +
Sbjct: 555 PSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQV 614

Query: 310 LDE------------MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           L E            ME +G   D+ T+  +I  LC+  ++  A    + M     D   
Sbjct: 615 LRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTS 674

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLS 413
             YN ++D L   G I  A     S++ ++     F Y++++   C       A  L   
Sbjct: 675 ATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQ 734

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            L  G  +      AV++ L    CRR    I+SK
Sbjct: 735 LLDRGFNVSIRDYSAVINRL----CRRHL-AIESK 764



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 23/322 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ++R L   +   C+   L +A +++   I  G   D++ YN++ID Y +    +    + 
Sbjct: 451 NSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELF 510

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
               E+GI+P+V T+NSLI G  +   ++ +  +LD +   G+ P V SY +LM      
Sbjct: 511 KVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANC 570

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN---ALR---------MFRGL 173
           G       + ++M    + P   T++++  GLC+    +N    LR         + R +
Sbjct: 571 GSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDM 630

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-----CF 228
           +  G  P+ +TYN +I+ LC+   L  A  + K++      P + TY  ++       C 
Sbjct: 631 ESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCI 690

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           R          L +++++  +   F Y TVI A    G  + A     Q++  G  + I 
Sbjct: 691 RKAD-----RFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIR 745

Query: 289 SYNTLINLYCKEG-KLEAAYLL 309
            Y+ +IN  C+    +E+ Y  
Sbjct: 746 DYSAVINRLCRRHLAIESKYFF 767



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 12/291 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L NI +  + K+  +E+A  +    I  G+ P+V T+N LI  YC+  +      IL+ +
Sbjct: 489 LYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVI 548

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  G+ P VV+Y +L+        +    +L  EM   GIPP   +Y+ +   L +  K 
Sbjct: 549 KLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKL 608

Query: 129 DEANRVFQ------------DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           +  N+V +            DM    +TP   T+N ++  LC+ ++   A  +F+ ++  
Sbjct: 609 ENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQ 668

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
              P   TYNILI  LC  G +R A   L  L     + +   YTT++K        ++ 
Sbjct: 669 NLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMA 728

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
           + + + +  +G+      Y  VI    +     E+  +   M++ G+  D+
Sbjct: 729 VILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL 779



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 14/279 (5%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 219
           R  D +L + + ++         +YN ++    +  ++    W + KE+ D     N  T
Sbjct: 157 RMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKM----WDVYKEIKDK----NEHT 208

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R +K +  +  L   + K        + ++++++ K+G +  A  +   ++
Sbjct: 209 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVL 268

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+   + S+N LIN  C  G +  A  L  +M K G E D  T+ IL+ G    G I 
Sbjct: 269 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMIS 328

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-----EVKDSFTYSSM 394
           GA   ++ M   G   ++  Y  ++    + G ID  + + + M     E+K    YS M
Sbjct: 329 GAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVM 388

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +  LCK  R+  A  L       G+     A   V+ GL
Sbjct: 389 LSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGL 427



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 4/171 (2%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LEK   ++ D    G+ PD +TYN +I   C+       + +  +M+   + P   TYN 
Sbjct: 620 LEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNI 679

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMIC 140
           LI        +  +   L  + +  +    ++Y +++  HC+   G P+ A  +F  ++ 
Sbjct: 680 LIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCV--KGDPEMAVILFNQLLD 737

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
                    ++ ++N LC+      +   F  +   G  P+L    ++IK 
Sbjct: 738 RGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIKS 788


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 213/438 (48%), Gaps = 10/438 (2%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG--- 72
            C A R+++A  I++  +   G  PDV +Y++L+  +C     +    +L+ M + G   
Sbjct: 138 LCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGS 197

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            +P+VVTY ++I G  +  ++  +  +   M++ G+ P+  +Y  L+H    +GK  E  
Sbjct: 198 HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVV 257

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++ Q+M    L P    + ++L+ LCKN     A  +F  + + G  P +  Y IL+ G 
Sbjct: 258 QMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGY 317

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY-KLGLEILSAMKRKGYTFD 251
              G L      L  +  +G +P+   +  IM C +  +      + I   M+++  + +
Sbjct: 318 ATEGSLSEMHSFLDLMVGNGVSPDHHIF-NIMFCAYAKKAMIDEAMHIFDKMRQQRLSPN 376

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I A  K+GR+ +A     QM+ +G+  DI  +++L+   C   K E A  L  
Sbjct: 377 IVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFF 436

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           E+  QG   D      L+  LC+ G +  A+  ++ M ++G   ++ +YN +VD     G
Sbjct: 437 EVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTG 496

Query: 372 KIDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           +ID A   ++V  S+ +K D  TY++++H  CKA+R+  A  L    L  G+        
Sbjct: 497 RIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556

Query: 428 AVVDGLRHSGCRREAKKI 445
            ++ GL  +G   EAK++
Sbjct: 557 TILHGLFQTGRFSEAKEL 574



 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 201/437 (45%), Gaps = 4/437 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  +++A+ +    I  GV P+  TY  LI  Y     +     +L  M   G+ PD
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              Y  L+    +N   + + ++ D ++  GI P+V  Y  L+H     G   E +    
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++P    FNIM     K    D A+ +F  +++    P +VTY  LI  LCK G
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLG 391

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A     ++ D G  P+   +++++       K++   E+   +  +G   D   + 
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    + GR+ EA   ++ M+  GV+ D++SYNTL++ +C  G+++ A  LLD +   
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + DK T+  L+ G CKA  I  A      M   G   ++  YN I+  L + G+   A
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571

Query: 377 INVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             ++ SM       + +TY+ +++ LCK   +  A K+  S     +++       ++  
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGA 631

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G + +A  + + I
Sbjct: 632 LLKGGRKEDAMDLFATI 648



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 182/364 (50%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV PD   +N++  AY +    D    I ++MR+  +SP++VTY +LI    +   +  +
Sbjct: 337 GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDA 396

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +   ++M++ G+ PD++ ++SL++ L  + K ++A  +F +++   +   T  FN ++  
Sbjct: 397 VLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCN 456

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+      A R+   + + G  P++++YN L+ G C  GR+  A  +L  +   G  P+
Sbjct: 457 LCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPD 516

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY T++    + R+      +   M  KG T D   Y T++    + GR  EA +   
Sbjct: 517 KVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 576

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+    Q++I +YN +IN  CK   ++ A+ +   +  +  + D +T  I+I  L K G
Sbjct: 577 SMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGG 636

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 396
             + A      ++  G   ++E Y  I + L K+G ++    +F +ME   +   S M++
Sbjct: 637 RKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLN 696

Query: 397 NLCK 400
            L +
Sbjct: 697 ALVR 700



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 201/437 (45%), Gaps = 4/437 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R  +A  I    IR G+ P+V  Y +L+  Y    S    ++ L+ M   G+SPD
Sbjct: 282 LCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPD 341

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              +N +     + +++  ++ + D+M +  + P++ +Y +L+  L +LG+ D+A   F 
Sbjct: 342 HHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   +TP    F+ ++ GLC     + A  +F  +   G   + V +N L+  LC+ G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A+ ++  +   G  P+ I+Y T++       +     ++L  +   G   D   Y 
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  + K  R+ +A     +M+  G+  D+V+YNT+++   + G+   A  L   M   
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + + YT+ I+I+GLCK   +  A      +       ++   N ++  L K G+ + A
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++F ++     V D  TY  +  NL K   L    +L  +  ++G         A+V  
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 433 LRHSGCRREAKKIQSKI 449
           L H G    A    SK+
Sbjct: 702 LLHRGDINRAGAYLSKL 718



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 179/389 (46%), Gaps = 43/389 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + NI  C + K   +++A  I  D +R   L P++VTY  LIDA C+    D      N+
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIF-DKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402

Query: 68  MREAGISPDVVTYNSLIAG-------------------------ATRNSLLSCSL----- 97
           M + G++PD+  ++SL+ G                             + L C+L     
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 98  -----DLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
                 L+D ML +G+ PDV SYN+L+  HCL   G+ DEA ++   ++   L P   T+
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCL--TGRIDEAAKLLDVIVSIGLKPDKVTY 520

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N +L+G CK R  D+A  +FR +   G  P++VTYN ++ GL + GR   A+ +   + +
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 580

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           S    N  TY  I+    +N       ++  ++  K    D F    +I A +K GR ++
Sbjct: 581 SRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKED 640

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A D    +   G+  D+ +Y  +     KEG LE    L   ME+ G   +      L+ 
Sbjct: 641 AMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVR 700

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            L   G+I  A  +L  +++  F  +LEA
Sbjct: 701 WLLHRGDINRAGAYLSKLDEKNF--SLEA 727



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 162/393 (41%), Gaps = 44/393 (11%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS-PDVVTYNSLIAGATRNSLLSCS 96
           V P   TY +LI  +C+      G+     + + G    D V ++ L+ G      +  +
Sbjct: 88  VAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 97  LD-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            D LL  M E G  PDV+SY+                                   I+L 
Sbjct: 148 TDILLRRMPEFGCTPDVFSYS-----------------------------------ILLK 172

Query: 156 GLCKNRYTDNALRMFRGLQKHG---FVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           G C  +  + AL +   +   G     P +VTY  +I GLCKA  +  A+ + + + D G
Sbjct: 173 GFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKG 232

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN  TYT ++       K+K  +++L  M   G   D + Y  ++    K GR  EA 
Sbjct: 233 VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEAR 292

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  + ++  G++ ++  Y  L++ Y  EG L   +  LD M   G   D +   I+    
Sbjct: 293 NIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAY 352

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
            K   I  A    + M +     N+  Y  ++D L K G++D A+  F  M       D 
Sbjct: 353 AKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDI 412

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           F +SS+V+ LC   +   A +L    L  G+R+
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRL 445



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 35/254 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA R++ A ++  + +  G+ PDVVTYN ++    Q   F     +   M  
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 580

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +    ++ TYN +I G  +N+ +                                   DE
Sbjct: 581 SRTQMNIYTYNIIINGLCKNNFV-----------------------------------DE 605

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F  +   DL     T NIM+  L K    ++A+ +F  +  +G VP++ TY ++ +
Sbjct: 606 AFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAE 665

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K G L     +   + ++G APN+     +++              LS +  K ++ 
Sbjct: 666 NLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSL 725

Query: 251 DGFGYCTVIAAFVK 264
           +      +I+ + +
Sbjct: 726 EASTTSMLISIYSR 739


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 210/423 (49%), Gaps = 12/423 (2%)

Query: 1    MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
            +F ++S R +    CT+       C+   + +A+  I + +  G + D  T  ++I A+C
Sbjct: 818  VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 877

Query: 54   QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            +    +      +++ + G+SP+++ Y+S+I+G  +   +  + +LL+EM++ G  P+V+
Sbjct: 878  EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 937

Query: 114  SYNSLMHCLFQLGKPDEANRVFQDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
            ++ SL+H L + G  + A R+F  +I  D   P   T+  M++G CK      A  +F  
Sbjct: 938  THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 997

Query: 173  LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
            +++ G VP   TY  LI G CKAG    A  +++ + + G  PN  TY +I+    +  +
Sbjct: 998  MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGR 1057

Query: 233  YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
             +   ++L+   +     DG  Y  +I+   K   + +A  ++ +M   G Q DI  Y T
Sbjct: 1058 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTT 1117

Query: 293  LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
            LI  +C++  ++ +  L DE+ K G    K T+T +I G C+   +  A    + M+  G
Sbjct: 1118 LIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHG 1177

Query: 353  FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSAS 408
               +  +Y  ++  L K+ ++D A  ++++M  K       T  ++ +  CK +   SA 
Sbjct: 1178 CAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAM 1237

Query: 409  KLL 411
             +L
Sbjct: 1238 VIL 1240



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 202/420 (48%), Gaps = 5/420 (1%)

Query: 5    LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            L+TR++N  +    +   +E A  +  +    GV PD  TY  +I  YC+  +       
Sbjct: 794  LTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRW 853

Query: 65   LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            +  M E G   D  T   +I      SL++ ++    ++ +MG+ P++ +Y+S++  L +
Sbjct: 854  ICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCK 913

Query: 125  LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELV 183
             G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F + ++   + P + 
Sbjct: 914  RGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVH 973

Query: 184  TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            TY  +I G CK  +L  A  + + + + G  PN  TYTT++    +   +    E++  M
Sbjct: 974  TYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELM 1033

Query: 244  KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              +G+  +   Y +++    K GR +EA   +     + ++ D V+Y  LI+  CK   +
Sbjct: 1034 SNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM 1093

Query: 304  EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
              A + L++M K GF+ D + +T LI   C+   +K +    + + K+G     E Y  +
Sbjct: 1094 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSM 1153

Query: 364  VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            +    ++ K+  A+  F+ M       DS +Y +++  LCK  RL  A +L  + +  G+
Sbjct: 1154 ICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL 1213



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 185/417 (44%), Gaps = 53/417 (12%)

Query: 8    RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            RL  +C  +      LE+A  ++     +GV  ++      +D             IL+ 
Sbjct: 742  RLYIVCTMSLVGKCNLERAHEVV--ECMVGVFAEIGKLKEAVD------------MILD- 786

Query: 68   MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
            MR  G+       N +I  A    L+  + ++ DEM   G+ PD  +Y  ++    + G 
Sbjct: 787  MRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGN 846

Query: 128  PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              EA+R   +M+        AT  +++   C+    + A+  F  + K G  P L+ Y+ 
Sbjct: 847  VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 906

Query: 188  LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
            +I GLCK G ++ A  +L+E+  +G  PN  T+T+                ++  + +KG
Sbjct: 907  MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS----------------LIHGLCKKG 950

Query: 248  YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            +T   F        F+K+ R            +D  + ++ +Y  +I+ YCKE KL  A 
Sbjct: 951  WTERAF------RLFLKLIR------------SDNYKPNVHTYTAMISGYCKEEKLSRAE 992

Query: 308  LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L + M++QG   +  T+T LIDG CKAGN   A   +E M+  GF  N   YN IVD L
Sbjct: 993  MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052

Query: 368  GKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             K G+ + A  +    F++    D  TY+ ++   CK   +  A   L    K G +
Sbjct: 1053 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQ 1109



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 12/322 (3%)

Query: 17   FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK    E+A  + +  IR     P+V TY  +I  YC+         +  RM+E G+ P
Sbjct: 946  LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 1005

Query: 76   DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA---- 131
            +  TY +LI G  +    S + +L++ M   G  P+  +YNS++  L + G+ +EA    
Sbjct: 1006 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 1065

Query: 132  NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            N  FQ+ I  D      T+ I+++  CK    + AL     + K GF P++  Y  LI  
Sbjct: 1066 NTGFQNQIEAD----GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAA 1121

Query: 192  LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
             C+   ++ +  +  E+   G AP   TYT+++    R +K  L ++    M   G   D
Sbjct: 1122 FCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181

Query: 252  GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
               Y  +I+   K  RL EA    + M+  G+    V+  TL   YCK     +A ++L+
Sbjct: 1182 SISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 1241

Query: 312  EMEKQGFECDKYTHTILIDGLC 333
             + K+ +   +  HT LI  LC
Sbjct: 1242 RLNKKLW--IRTVHT-LIRKLC 1260



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 7/351 (1%)

Query: 5    LSTRLLNIC--VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            LS  L+N    +   CK   +++A  ++ + ++ G  P+V T+  LI   C+    +  +
Sbjct: 897  LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 956

Query: 63   TI-LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-- 119
             + L  +R     P+V TY ++I+G  +   LS +  L + M E G+ P+  +Y +L+  
Sbjct: 957  RLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 1016

Query: 120  HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
            HC  + G   +A  + + M      P T T+N +++GLCK    + A ++     ++   
Sbjct: 1017 HC--KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 1074

Query: 180  PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
             + VTY ILI   CK   +  A   L ++   G  P+   YTT++    R    K   ++
Sbjct: 1075 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 1134

Query: 240  LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
               + + G       Y ++I  + +  ++  A  + ++M   G   D +SY  LI+  CK
Sbjct: 1135 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCK 1194

Query: 300  EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
            E +L+ A  L D M  +G    + T   L    CK  +   A + LE +NK
Sbjct: 1195 ESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK 1245


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 193/400 (48%), Gaps = 7/400 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  +CKA  +E+AEAI+      G+   +  YNML+D Y    + D    +  R+
Sbjct: 299 IYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRL 358

Query: 69  R---EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +   E G+SP VV+Y  LI   ++   +  +L + +EM + GI  +  +Y+ ++    QL
Sbjct: 359 KARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQL 418

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G    A  VF+DM    + P   T+NI++N  CKN   + AL +   ++     P L TY
Sbjct: 419 GDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTY 478

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I+I G  K G LR A   ++++  +G  P+A TY  IM    +  +      I+  M  
Sbjct: 479 TIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVV 538

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   +   Y T+I  +  IG +  A  Y  ++   G++ D+++Y +L+   CK G++++
Sbjct: 539 AGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQS 598

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
              +  EM   G   + Y + IL+DG  + G++  A   ++ M   G   ++ +Y   ++
Sbjct: 599 TLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFIN 658

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
              K G +  A    E M+ +    +   Y++++H    A
Sbjct: 659 ACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASA 698



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 168/351 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  +++KA  I  +    G+  +  TY+M+ID Y Q       +++   M  AGI PD
Sbjct: 380 YSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPD 439

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYN L+    +N  ++ +L+LL  M     PP + +Y  ++    ++G    A    +
Sbjct: 440 GITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVR 499

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM      P  AT+N++++GL +    D A  +   +   G  P   +Y  LI+G    G
Sbjct: 500 DMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIG 559

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A      + + G  P+ I Y +++K C +  + +  L I + M   G   + + Y 
Sbjct: 560 DMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYN 619

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  + + G + EA+D M++M  +G+  DI SY + IN  CK G +  A   +++M++Q
Sbjct: 620 ILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQ 679

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           G + +   +T LI G   A   + A +  + M   G   +   Y+CI+  L
Sbjct: 680 GVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSL 730



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 196/463 (42%), Gaps = 42/463 (9%)

Query: 30  IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATR 89
           ++D  +    P    + +L++ Y +     +       MR AGI P+V +Y +LI     
Sbjct: 180 VVDAFKRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAV 239

Query: 90  NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
              L  ++  ++EM   G+ P+  +Y+ ++    +LG  + A R FQ  +  +       
Sbjct: 240 AQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVI 299

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL--CKA-GRLRTARWILK 206
           +N +++  CK    + A  +   +++ G    L  YN+L+ G   C+A  +       LK
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
              ++G +P  ++Y  ++    +  K    L+I + M+ +G   +   Y  +I  +V++G
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
               A    E M   G++ D ++YN L+N +CK G++  A  LL  ME         T+T
Sbjct: 420 DTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYT 479

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 385
           I+IDG  K G+++ A   +  M   GF  +   YN I+  L + G++D A ++ + M V 
Sbjct: 480 IIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVA 539

Query: 386 --------------------------------------KDSFTYSSMVHNLCKAKRLPSA 407
                                                  D   Y+S++   CKA R+ S 
Sbjct: 540 GVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQST 599

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             +      +GV +       ++DG    G   EA  I  K+R
Sbjct: 600 LAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMR 642



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 192/461 (41%), Gaps = 42/461 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVT----------------------------- 44
           +  +  A  L  A A + +    GV P+  T                             
Sbjct: 234 IHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENW 293

Query: 45  ------YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
                 YN +I AYC+  + +    I+  M E G+   +  YN L+ G      +   L+
Sbjct: 294 HHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLN 353

Query: 99  L---LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +   L    E G+ P V SY  L++   +LGK D+A ++  +M    +     T++++++
Sbjct: 354 VFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIID 413

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  +   T NA  +F  +   G  P+ +TYNIL+   CK G++  A  +L  +      P
Sbjct: 414 GYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPP 473

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
              TYT I+    +    ++  E +  MK  G+      Y  ++    + G++  A   +
Sbjct: 474 TLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASII 533

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++MV  GV  +  SY TLI  Y   G +  A+   + +++ G + D   +  L+   CKA
Sbjct: 534 DEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKA 593

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G ++        M   G   N   YN ++D   + G +  A ++ + M       D  +Y
Sbjct: 594 GRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSY 653

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +S ++  CKA  +  A++ +    + GV+    A   ++ G
Sbjct: 654 TSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHG 694



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           + S    N+ +    +A ++++A +II + +  GV P+  +Y  LI+ Y         + 
Sbjct: 507 RPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFK 566

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             NR++E G+ PDV+ Y SL+    +   +  +L +  EM   G+P + + YN L+    
Sbjct: 567 YFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWA 626

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q G   EA+ + Q M    LTP   ++   +N  CK      A      +++ G  P L 
Sbjct: 627 QRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQ 686

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            Y  LI G   A     A     E+  +G  P+   Y  IM
Sbjct: 687 AYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIM 727



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 118/288 (40%), Gaps = 6/288 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R   I +  F K   L  A   + D    G  P   TYN+++    Q    D   +I++ 
Sbjct: 476 RTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDE 535

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M  AG+ P+  +Y +LI G      +  +    + + E+G+ PDV +Y SL+    + G+
Sbjct: 536 MVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGR 595

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
                 +  +M    +      +NI+L+G  +      A  + + ++  G  P++ +Y  
Sbjct: 596 MQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTS 655

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
            I   CKAG +  A   ++++   G  PN   YTT++         +  L     MK  G
Sbjct: 656 FINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAG 715

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDY------MEQMVTDGVQLDIVS 289
              D   Y  ++ + +    +   T +        +MV  G+ +D  +
Sbjct: 716 MIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFAT 763


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 210/454 (46%), Gaps = 50/454 (11%)

Query: 11  NICVCTFCKANRLEKAEA----IIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +I + +FCK   L+ AE+    +I DGIR  + P    YN LI+ +C+F    A   +  
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP----YNSLINGHCKFGDLSAAEFLYT 452

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M   G+ P   T+ +LI+G  ++  +  +  L  EM E  I P V+++ +L++ L    
Sbjct: 453 KMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTN 512

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA+++F +M+   + P   T+N+M+ G CK    D A  +   +  +G VP+  TY 
Sbjct: 513 EMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYR 572

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM---------------KCCFRNR 231
            LI GLC  GR+  A+  + +L       N + Y+ ++                C    R
Sbjct: 573 PLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQR 632

Query: 232 KYKLGL--------------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
              + L                     +L  M  +G   D   Y ++I A+ K G  K++
Sbjct: 633 GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKS 692

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            + ++ MVT+    ++V+Y   +N  CK G+++ A  L ++M       +  T+   +D 
Sbjct: 693 GECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDS 752

Query: 332 LCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
           L K GN+K A  LH E +   G  +N   YN ++    K G++  A  V   M       
Sbjct: 753 LTKEGNMKEATDLHHEMLK--GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D  TYS++++  C++  + +A +L  + L+ GV 
Sbjct: 811 DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVE 844



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 194/437 (44%), Gaps = 8/437 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K   ++ A  +++   R G LP++  YN LI+A C+    D    +   M    +  + V
Sbjct: 335 KKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDV 394

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQ 136
           TY+ LI    +  +L  +      M+E GI   ++ YNSL+  HC F  G    A  ++ 
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF--GDLSAAEFLYT 452

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   L P   TF  +++G CK+   + A +++R + +    P + T+  LI GLC   
Sbjct: 453 KMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTN 512

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +  E+ +    P  +TY  +++   +        E+L  M   G   D + Y 
Sbjct: 513 EMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYR 572

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I+     GR+  A D+++ +    ++L+ + Y+ L++ YC +G+L  A     EM ++
Sbjct: 573 PLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQR 632

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D   H +LIDG  K  ++K     L+ M   G   +   Y  ++D   K+G    +
Sbjct: 633 GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKS 692

Query: 377 INVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
               + M  +  F    TY++ ++ LCK   +  A  L    L + +          +D 
Sbjct: 693 GECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDS 752

Query: 433 LRHSGCRREAKKIQSKI 449
           L   G  +EA  +  ++
Sbjct: 753 LTKEGNMKEATDLHHEM 769



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 178/374 (47%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N+ +   CK   + +A  +       G+  DVVTY  L+  +C+   FD G  +
Sbjct: 251 LSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICL 310

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           +N M E G  P     + L+ G  +   +  + DL+ ++   G  P+++ YN+L++ L +
Sbjct: 311 MNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCK 370

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
               D+A  ++++M   +L     T++I+++  CK    D A   F  + + G    +  
Sbjct: 371 GEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP 430

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI G CK G L  A ++  ++ + G  P A T+TT++    ++ + +   ++   M 
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            K      + +  +I        + EA+   ++MV   ++   V+YN +I  YCK   ++
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ LL++M   G   D YT+  LI GLC  G +  A+  ++ ++K     N   Y+ ++
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALL 610

Query: 365 DRLGKDGKIDHAIN 378
                 G++  A++
Sbjct: 611 HGYCGQGRLTEALS 624



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 195/434 (44%), Gaps = 10/434 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  +CK  ++EKA  +  +     + P V T+  LI   C          + + M E  I
Sbjct: 470 ISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKI 529

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P  VTYN +I G  +   +  + +LL++ML  G+ PD ++Y  L+  L   G+   A  
Sbjct: 530 KPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKD 589

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
              D+   +L      ++ +L+G C       AL     + + G   +LV + +LI G  
Sbjct: 590 FIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAM 649

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K   ++    +LK++ D G  P+++ YT+++    +   +K   E L  M  +    +  
Sbjct: 650 KQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVV 709

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y   +    K+G +  A    E+M+T  +  + V+Y   ++   KEG ++ A  L  EM
Sbjct: 710 TYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM 769

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            K G   +  T+ ILI G CK G +  A   L  M + G   +   Y+ I+    + G +
Sbjct: 770 LK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDV 828

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR---ILKSAQ 426
             A+ ++++M  K    DS  ++ +++  C    L  A +L    L  G++   IL+  +
Sbjct: 829 GAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQK 888

Query: 427 K--AVVDGLRHSGC 438
           +   V + L H GC
Sbjct: 889 RDLGVCNFLMHGGC 902



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 200/476 (42%), Gaps = 46/476 (9%)

Query: 27  EAIIIDGIRLG--VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD-------- 76
           +A+++  + LG  +LP+V T + +++   +   F   + + +    AG+ PD        
Sbjct: 166 DAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVI 225

Query: 77  ---------------------------VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
                                      +VTYN LI G  +   +  +L++   + E G+ 
Sbjct: 226 RSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLK 285

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
            DV +Y +L+    ++ + D+   +  +M+     P  A  + +++GL K    D+A  +
Sbjct: 286 EDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDL 345

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
              L + GF+P L  YN LI  LCK   L  A  + K +       N +TY+ ++    +
Sbjct: 346 VVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCK 405

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
                +       M   G     + Y ++I    K G L  A     +M+ +G++    +
Sbjct: 406 RGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATT 465

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           + TLI+ YCK+ ++E A+ L  EM ++      YT T LI GLC    +  A    + M 
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLP 405
           +         YN +++   K   +D A  + E M     V D++TY  ++  LC   R+ 
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA-----KKIQSKIRMAKISH 456
           +A   +    K  +++ +    A++ G    G   EA     + IQ  I M  + H
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCH 641



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 182/438 (41%), Gaps = 39/438 (8%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           ++ L+ +Y Q         +L  M    + P+V T ++++ G  R        ++ DE +
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PD ++ ++++  L +L     A      M          T+N++++GLCK     
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLC------------------------------- 193
            AL + + L++ G   ++VTY  L+ G C                               
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 194 ----KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               K G + +A  ++ +LG  G  PN   Y  ++    +         +   M      
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I +F K G L  A  Y  +M+ DG++  I  YN+LIN +CK G L AA  L
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M  +G E    T T LI G CK   ++ A      MN+     ++  +  ++  L  
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCS 510

Query: 370 DGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
             ++  A  +F+ M   ++K +  TY+ M+   CKA  +  A +LL   L +G+      
Sbjct: 511 TNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYT 570

Query: 426 QKAVVDGLRHSGCRREAK 443
            + ++ GL  +G    AK
Sbjct: 571 YRPLISGLCSTGRVSAAK 588



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 175/384 (45%), Gaps = 53/384 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C   RL +A +   + I+ G+  D+V + +LID   +       + +L +M + G+ PD
Sbjct: 613 YCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPD 672

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y S+I   ++      S + LD M+     P+V +Y + M+ L ++G+ D A  +F+
Sbjct: 673 SVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFE 732

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  +++P + T+   L+ L K      A  +   + K G +    TYNILI+G CK G
Sbjct: 733 KMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLG 791

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A  +L E+ ++G  P+ ITY+TI+                            + +C
Sbjct: 792 RLIEATKVLSEMTENGIFPDCITYSTII----------------------------YEHC 823

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
                  + G +  A +  + M+  GV+ D V++N LI   C  G L+ A+ L ++M  +
Sbjct: 824 -------RSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876

Query: 317 GFECDKYTH---------TILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDR 366
           G +  +              L+ G C  G +  A RL+   + +     +LE + C+   
Sbjct: 877 GLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTR-AVKLSLEMWKCLY-- 933

Query: 367 LGKDGKIDHAINVFESMEVKDSFT 390
           L   G I  +    E +EV +S T
Sbjct: 934 LLSYGVISKS----EELEVNESIT 953



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 149/327 (45%), Gaps = 9/327 (2%)

Query: 113 WSYNSLMHCLFQLGKPDEANRVFQDMICGDLT---PCTATFNIMLNGLCKNRYTDNALRM 169
           W  NSL+H L   G   +   VF+  +          T  F+ +++   +N    +A+ +
Sbjct: 113 WPANSLLHTLLLRGS--DPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVV 170

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            R +  +  +PE+ T + ++ GL +  +      +  E  ++G  P+  T + +++    
Sbjct: 171 LRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCE 230

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
            + +    E +  M+   +      Y  +I    K G + EA +  + +   G++ D+V+
Sbjct: 231 LKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVT 290

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y TL+  +C+  + +    L++EM + GF   +   + L+DGL K GNI  A   +  + 
Sbjct: 291 YCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLG 350

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
           + GF  NL  YN +++ L K   +D A  ++++M       +  TYS ++ + CK   L 
Sbjct: 351 RFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLD 410

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDG 432
            A       ++ G+R       ++++G
Sbjct: 411 VAESYFGRMIEDGIRETIYPYNSLING 437


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 182/346 (52%), Gaps = 4/346 (1%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +  ISP+V+++N +I    +  L+  ++++  EM      PDV++Y +LM  L +  + D
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +  +M      P + TFN+++NGLCK        ++   +   G VP  VTYN +I
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  G+L  A  +L  +  S   PN +TY T++    +  +   G+ +LS+++ +G+ 
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + + Y T+I+   K  + +EA    ++MV  G Q +IV Y+ LI+  C+EGKL+ A  +
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 420

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM  +G   + +T++ LI G  K GN + A    + M K     N   Y+ ++  L +
Sbjct: 421 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 480

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           DGK+  A+ ++  M  +    D   YSSM+H LC A  +    KL 
Sbjct: 481 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLF 526



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 6/392 (1%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G +  + P+V+++N++I A C+    D    +   M      PDV TY +L+ G  +   
Sbjct: 179 GGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDR 238

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  ++ LLDEM   G  P   ++N L++ L + G      ++  +M      P   T+N 
Sbjct: 239 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 298

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++NGLC     D A+ +   +     VP  VTY  LI GL K GR      +L  L + G
Sbjct: 299 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H  N   Y+T++   F+  K +  + +   M  KG   +   Y  +I    + G+L EA 
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           + + +MV  G   +  +Y++LI  + K G  + A  +  EM K     ++  +++LI GL
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF------ESMEVK 386
           C+ G ++ A +   +M   G   ++ AY+ ++  L   G ++  + +F      ES    
Sbjct: 479 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D  TY+ ++  LCK   +  A  LL S L  G
Sbjct: 539 DVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 203/416 (48%), Gaps = 29/416 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK +R+++A  +++D +++ G  P  VT+N+LI+  C+         +++ M   G  P
Sbjct: 233 LCKEDRIDEA-VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVP 291

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VTYN++I G      L  ++ LLD M+     P+  +Y +L++ L + G+  +   + 
Sbjct: 292 NEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL 351

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +           ++ +++GL K   ++ A+ +++ + + G  P +V Y+ LI GLC+ 
Sbjct: 352 SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCRE 411

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A+ IL E+ + G  PNA TY++++K  F+    +  + +   M +     +   Y
Sbjct: 412 GKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICY 471

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-- 313
             +I    + G+L+EA      M+  G++ D+V+Y+++I+  C  G +E    L +EM  
Sbjct: 472 SVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLC 531

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL---------------- 357
           ++   + D  T+ IL+  LCK  +I  A   L  M   G + +L                
Sbjct: 532 QESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNP 591

Query: 358 -----EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
                E  + +V RL K  +I  A  + E M  K    ++ T+  ++  LCK K++
Sbjct: 592 PQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 647



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 6/367 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEML--EMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V ++NS++    +  L   +L+  +  +  +  I P+V S+N ++  + +LG  D A  V
Sbjct: 151 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 210

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F++M      P   T+  +++GLCK    D A+ +   +Q  G  P  VT+N+LI GLCK
Sbjct: 211 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G +     ++  +   G  PN +TY TI+       K    + +L  M       +   
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I   VK GR  +    +  +   G   +  +Y+TLI+   KE K E A  L  +M 
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           ++G + +   ++ LIDGLC+ G +  A+  L  M   G   N   Y+ ++    K G   
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            AI V++ M     V +   YS ++H LC+  +L  A  +    L  G+R    A  +++
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510

Query: 431 DGLRHSG 437
            GL ++G
Sbjct: 511 HGLCNAG 517



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 186/406 (45%), Gaps = 7/406 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           T+  LI+ Y     F   + + +RM+          +  +     +  L   +++L   M
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 104 L-EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNGLCKN 160
           + E      V S+NS+++ + Q G    A   ++  + G  +++P   +FN+++  +CK 
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A+ +FR +      P++ TY  L+ GLCK  R+  A  +L E+   G  P+++T+
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    +        +++  M  KG   +   Y T+I      G+L +A   +++MV 
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
                + V+Y TLIN   K+G+      LL  +E++G   ++Y ++ LI GL K    + 
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 381

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A    + M + G   N+  Y+ ++D L ++GK+D A  +   M  K    ++FTYSS++ 
Sbjct: 382 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
              K      A ++     K+     +     ++ GL   G  REA
Sbjct: 442 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 487



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 46/327 (14%)

Query: 128 PDEANRVFQDMICGDLTPCTAT---FNIMLNGLCKNRYTDNALRMFR-GLQ-KHGFVPEL 182
           P++A  +F  M+  D   C  T   FN +LN + +      AL  +  G+  K    P +
Sbjct: 131 PEKAIELFGRMV--DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 188

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           +++N++IK +CK G +  A  + +E+              I KC                
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMA-------------IQKC---------------- 219

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                   D F YCT++    K  R+ EA   +++M  +G     V++N LIN  CK+G 
Sbjct: 220 ------EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +     L+D M  +G   ++ T+  +I+GLC  G +  A   L+ M       N   Y  
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++ L K G+    +++  S+E +    + + YS+++  L K ++   A  L    ++ G
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKI 445
            +       A++DGL   G   EAK+I
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEI 420


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 182/346 (52%), Gaps = 4/346 (1%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +  ISP+V+++N +I    +  L+  ++++  EM      PDV++Y +LM  L +  + D
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +  +M      P + TFN+++NGLCK        ++   +   G VP  VTYN +I
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  G+L  A  +L  +  S   PN +TY T++    +  +   G+ +LS+++ +G+ 
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + + Y T+I+   K  + +EA    ++MV  G Q +IV Y+ LI+  C+EGKL+ A  +
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM  +G   + +T++ LI G  K GN + A    + M K     N   Y+ ++  L +
Sbjct: 405 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 464

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           DGK+  A+ ++  M  +    D   YSSM+H LC A  +    KL 
Sbjct: 465 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLF 510



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 6/392 (1%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G +  + P+V+++N++I A C+    D    +   M      PDV TY +L+ G  +   
Sbjct: 163 GGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDR 222

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  ++ LLDEM   G  P   ++N L++ L + G      ++  +M      P   T+N 
Sbjct: 223 IDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNT 282

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++NGLC     D A+ +   +     VP  VTY  LI GL K GR      +L  L + G
Sbjct: 283 IINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H  N   Y+T++   F+  K +  + +   M  KG   +   Y  +I    + G+L EA 
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           + + +MV  G   +  +Y++LI  + K G  + A  +  EM K     ++  +++LI GL
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF------ESMEVK 386
           C+ G ++ A +   +M   G   ++ AY+ ++  L   G ++  + +F      ES    
Sbjct: 463 CEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D  TY+ ++  LCK   +  A  LL S L  G
Sbjct: 523 DVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 203/416 (48%), Gaps = 29/416 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK +R+++A  +++D +++ G  P  VT+N+LI+  C+         +++ M   G  P
Sbjct: 217 LCKEDRIDEA-VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVP 275

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VTYN++I G      L  ++ LLD M+     P+  +Y +L++ L + G+  +   + 
Sbjct: 276 NEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL 335

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +           ++ +++GL K   ++ A+ +++ + + G  P +V Y+ LI GLC+ 
Sbjct: 336 SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCRE 395

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A+ IL E+ + G  PNA TY++++K  F+    +  + +   M +     +   Y
Sbjct: 396 GKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICY 455

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-- 313
             +I    + G+L+EA      M+  G++ D+V+Y+++I+  C  G +E    L +EM  
Sbjct: 456 SVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLC 515

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL---------------- 357
           ++   + D  T+ IL+  LCK  +I  A   L  M   G + +L                
Sbjct: 516 QESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNP 575

Query: 358 -----EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
                E  + +V RL K  +I  A  + E M  K    ++ T+  ++  LCK K++
Sbjct: 576 PQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 631



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 173/367 (47%), Gaps = 6/367 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEML--EMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V ++NS++    +  L   +L+  +  +  +  I P+V S+N ++  + +LG  D A  V
Sbjct: 135 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 194

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F++M      P   T+  +++GLCK    D A+ +   +Q  G  P  VT+N+LI GLCK
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G +     ++  +   G  PN +TY TI+       K    + +L  M       +   
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I   VK GR  +    +  +   G   +  +Y+TLI+   KE K E A  L  +M 
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           ++G + +   ++ LIDGLC+ G +  A+  L  M   G   N   Y+ ++    K G   
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            AI V++ M     V +   YS ++H LC+  +L  A  +    L  G+R    A  +++
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 431 DGLRHSG 437
            GL ++G
Sbjct: 495 HGLCNAG 501



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 188/409 (45%), Gaps = 13/409 (3%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRM---REAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           T+  LI+ Y     F   + + +RM   R   I  + +    +     +  L   +++L 
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL---VFRAYGKAHLPEKAIELF 122

Query: 101 DEML-EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNGL 157
             M+ E      V S+NS+++ + Q G    A   ++  + G  +++P   +FN+++  +
Sbjct: 123 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 182

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK    D A+ +FR +      P++ TY  L+ GLCK  R+  A  +L E+   G  P++
Sbjct: 183 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 242

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +T+  ++    +        +++  M  KG   +   Y T+I      G+L +A   +++
Sbjct: 243 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 302

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV      + V+Y TLIN   K+G+      LL  +E++G   ++Y ++ LI GL K   
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 362

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
            + A    + M + G   N+  Y+ ++D L ++GK+D A  +   M  K    ++FTYSS
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           ++    K      A ++     K+     +     ++ GL   G  REA
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 471



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 46/327 (14%)

Query: 128 PDEANRVFQDMICGDLTPCTAT---FNIMLNGLCKNRYTDNALRMFR-GLQ-KHGFVPEL 182
           P++A  +F  M+  D   C  T   FN +LN + +      AL  +  G+  K    P +
Sbjct: 115 PEKAIELFGRMV--DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 172

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           +++N++IK +CK G +  A  + +E+              I KC                
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMA-------------IQKC---------------- 203

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                   D F YCT++    K  R+ EA   +++M  +G     V++N LIN  CK+G 
Sbjct: 204 ------EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +     L+D M  +G   ++ T+  +I+GLC  G +  A   L+ M       N   Y  
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           +++ L K G+    +++  S+E +    + + YS+++  L K ++   A  L    ++ G
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKI 445
            +       A++DGL   G   EAK+I
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEI 404


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 221/491 (45%), Gaps = 42/491 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+S  L    +  +C    + KA  I  + +R G++P  VTY +LI    +    +  Y 
Sbjct: 279 KMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYE 338

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +MR+ G+ P    +N +I G   + L   ++ L  EM + GI PD ++YN L+H L 
Sbjct: 339 LCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLC 397

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q  K  EA  +++ M    + P   T++ +L   C N   D A++++  +   GF P +V
Sbjct: 398 QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVV 457

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSA 242
           TY  L+KG         A  +L E+  +G + N  TY T++   C   R  ++G E+L  
Sbjct: 458 TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG-EMLKR 516

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
            + +G+      Y ++I  F+K G +  A    +QM   G+  +IV+Y + I+ YCK   
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL----------------- 345
            + A  +L+++  +G   D   +  LI G C+ GN+  A   L                 
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636

Query: 346 ------------------EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 383
                             E M K G D +   Y  ++D   KDG +  A+ ++  M    
Sbjct: 637 FITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKG 696

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            + D  T++++ H LC+   +  A KLL    +  +R        +++G   +G  +EA 
Sbjct: 697 NIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAF 756

Query: 444 KIQSKIRMAKI 454
           ++  ++   KI
Sbjct: 757 RLHDEMLERKI 767



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 185/389 (47%), Gaps = 4/389 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  ++ +A  +       GV P +VTY+ L+  YC     D    +   M  
Sbjct: 390 NILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG 449

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+VVTY +L+ G    +    +  LL EM + G+  + ++YN+L++ L  +G+  E
Sbjct: 450 KGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              + +        P   T+N ++NG  K     +A  +++ +   G  P +VTY   I 
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK      A  +L ++   G  P+   Y +++    +       L++L  M + G   
Sbjct: 570 GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLP 629

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y + I  +  +  ++EA  + E+M+ +G+ LD  +Y TLI+ + K+G +  A  L 
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   D  T T L  GLC+ G+I  AR  L+ MN++    N+  YN +++   ++
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749

Query: 371 GKIDHAINVFESME----VKDSFTYSSMV 395
           GK+  A  + + M     + D  TY  +V
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 189/444 (42%), Gaps = 40/444 (9%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D   +++++ A  +   +D    + + M  + I PD    +  IA   +    + +L +L
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M + G  P  +++NS++  L + G+ +EA  +  +++             +++G C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           R    AL +F    + G VP  VTY +LI+G  + G    A  + +++ D G  P+   +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++K    ++ +K  + +   M   G   D F Y  +I    +  +++EA +  E+M  
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 281 DGVQLDIVSYNTLINLYCKEG-----------------------------------KLEA 305
            GV+  IV+Y++L+  YC  G                                     + 
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           AY LL EM++ G  C+ YT+  LI+GLC  G +      L+     GF      YN I++
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K G +  A  V++ M  K    +  TY+S +   CK      A K+L      G+R 
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594

Query: 422 LKSAQKAVVDGLRHSGCRREAKKI 445
             +A  +++ G    G    A ++
Sbjct: 595 DIAAYNSLIYGFCQEGNMSHALQV 618



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 5/370 (1%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++PD  +   L+A   R++  + +L LL EM   G P D W ++ +M   F+ G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A R+F +M   ++ P     ++ +  LCK R  + AL + R +Q  GFVP   T+N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           ++  L K GR+  A  I  EL  +G   + +  TT+M      R+ +  L+I     R G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                  Y  +I    + G  ++A +   QM   G+      +N +I     +   + A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM   G   D +T+ ILI  LC+   I+ A    E MN+ G    +  Y+ ++   
Sbjct: 373 SLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
             +G +D A+ ++  M  K    +  TY++++           A  LL    ++GV    
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 424 SAQKAVVDGL 433
                +++GL
Sbjct: 492 YTYNTLINGL 501



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 52/325 (16%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P  +TYN +I+ + +     + + +  +M   GI P++VTY S I G  + S    +
Sbjct: 521 GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLA 580

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L +L+++   G+ PD+ +YNSL++   Q G    A +V   M+   L P  + +N  + G
Sbjct: 581 LKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
               +  + ALR +  + K G   +  TY  LI G  K G +  A  +  E+   G+ P+
Sbjct: 641 YKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            IT+T +     RN                                   G + +A   ++
Sbjct: 701 HITFTALTHGLCRN-----------------------------------GDIDDARKLLD 725

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M    ++ +++ YN LIN Y + GKL+ A+ L DEM ++    D  T+ IL+       
Sbjct: 726 EMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG------ 779

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYN 361
                      M  +G DS ++A N
Sbjct: 780 -----------MKSLGSDSPIDAEN 793



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 53/115 (46%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L T      +  F K   +  A  +  + +  G +PD +T+  L    C+    D    +
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
           L+ M    I P+V+ YN LI G  RN  L  +  L DEMLE  I PD  +Y+ L+
Sbjct: 724 LDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 202/419 (48%), Gaps = 5/419 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST+ LN  +        +E AE + ++  + GV PD V++ +++ A C           L
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWL 247

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M E G   D  T   +I    +   ++  +    +M+EMG+ P+V ++ +L++ L + 
Sbjct: 248 NAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQ 307

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F  L +  G+ P + T
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I G CK  +L  A  +L  + + G  PN  TYTT++    +   +    E++  M 
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           ++G++ + + Y  +I    K G L EA   + ++   G+Q D V+Y  L++++C++    
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            + +  ++M K GF  D +++T LI   C+   +K +    E    +G     + Y  ++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               + G    A+ +F+ M       DS TY +++  LCK  +L  A  L  + +  G+
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 158/338 (46%), Gaps = 38/338 (11%)

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+ P   T N ++  A    L+  + ++  EM + G+ PD  S+  ++     +G
Sbjct: 179 EMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA R    M+        AT  ++++  C+  Y +  +  F  + + G  P ++ + 
Sbjct: 239 RVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK G ++ A  +L+E+   G  PN  T+TT                ++  + +K
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT----------------LIDGLCKK 342

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+T   F        F+K+ R            +DG + ++ +Y  +IN YCKE KL  A
Sbjct: 343 GWTEKAF------RLFLKLVR------------SDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            +LL  M++QG   +  T+T LIDG CK GN   A   ++ M K GF  N+  YN I+D 
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L K G +D A  +   + V     D  TY+ ++   C+
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCR 482



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 4/328 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK    EKA  + +  +R  G  P+V TY  +I+ YC+    +    +L+RM+E G+ P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TY +LI G  +      + +L+D M + G  P++++YN+++  L + G  DEA R+ 
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             +    L     T+ I+++  C+   T+ +L  F  + K GF P++ +Y  LI   C+ 
Sbjct: 459 NKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQ 518

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            +++ +  + +E    G  P   TYT+++    R     L +++   M   G   D   Y
Sbjct: 519 KQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITY 578

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I+   K  +L +A +  + M+  G+    V+  TL   YCK+     A  +LD +EK
Sbjct: 579 GALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK 638

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARL 343
           + +     T   L+  LC  G +  A L
Sbjct: 639 RQW---IRTVNTLVRKLCSEGKLDMAAL 663



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 5/302 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           M+    +N     A+ M   +Q  G VP   T N ++      G +  A  +  E+   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            +P+ +++  ++  C    +       L+AM  +G+  D      +I AF + G +    
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            Y  +MV  G+  +++++  LIN  CK+G ++ A+ LL+EM ++G++ + YTHT LIDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 333 CKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           CK G  + A RL L+ +   G+  N+  Y  +++   K+ K++ A  +   M+    V +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           + TY++++   CK      A +L+    K G         A++DGL   G   EA ++ +
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 448 KI 449
           K+
Sbjct: 460 KV 461



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 67/289 (23%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK     +A  ++    + G  P++ TYN +ID  C+  S D  Y +LN++   G+  D 
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTY  L++   R +  + SL   ++ML++G  PD+ SY +L+    +  +  E+ R+F++
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEE 530

Query: 138 ---------------MICG--------------------DLTPCTATFNIMLNGLCKNRY 162
                          MICG                       P + T+  +++GLCK   
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590

Query: 163 TDNALRMFRGLQKHGFVP--------------------------------ELVTYNILIK 190
            D+A  ++  +   G  P                                 + T N L++
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVR 650

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
            LC  G+L  A     +L D     N +T    M  C+ + KY L  E+
Sbjct: 651 KLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSEL 699


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 173/357 (48%), Gaps = 4/357 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D   ++ N +     +P  + +N ++    ++      L L  +M   GI P++ + N L
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++C  QLG    A  VF  ++     P T TF  ++ GLC       AL     L   GF
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
               ++Y  LI GLCK G  R A  +L+ +      PN + Y+TI+    +++      +
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           + S M  KG + +   Y  +I+ F  +G+LK+A D   +M+++ ++ D+ ++N L++++C
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K GK+  A  L+DEM  +G   +  T++ ++D LCK   +  A   L  +   G   N+ 
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            Y  ++D L   GK++ A N+FE + VK       TY  M +  CK      AS LL
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALL 425



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 6/322 (1%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A  +F  ++  + TP    FN +L  L K+++    L + + ++  G  P LV  NIL
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 247
           I   C+ G +  A  +  ++   G+ PN IT+TT++K  C + + ++  L     +   G
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQ-ALNFHDKLVALG 187

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           + F+   Y T+I    K+G  + A D + ++    VQ ++V Y+T+I+  CK+  +  A+
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L  EM  +G   +  T++ LI G    G +K A      M       ++  +N +VD  
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K GKI +A+ + + M    +  +  TYSS++  LCK  R+  A  LL      G+R   
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNM 367

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                ++DGL  SG   +A+ I
Sbjct: 368 HTYTILIDGLCTSGKLEDARNI 389



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 36/314 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + LG   + ++Y  LID  C+     A   +L R+    + P+VV Y+++I G  ++  +
Sbjct: 184 VALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHV 243

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + + DL  EM+  GI P+V +Y++L+   F +GK  +A  +F  MI  ++ P   TFNI+
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK+     AL++   +   G  P +VTY+ ++  LCK  R+  A  +L +L D G 
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI 363

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN  TYT ++                             G CT        G+L++A +
Sbjct: 364 RPNMHTYTILID----------------------------GLCTS-------GKLEDARN 388

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E ++  G  + +V+Y  +   +CK+G  + A  LL +ME+ G   D  T+ ++   L 
Sbjct: 389 IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLF 448

Query: 334 KAG-NIKGARLHLE 346
           K G N    +LH E
Sbjct: 449 KKGENDMAEKLHRE 462



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 174/349 (49%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P++V  N+LI+ +CQ       +++  ++ + G +P+ +T+ +LI G      +  +
Sbjct: 117 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L+  D+++ +G   +  SY +L+  L ++G+   A  + + +    + P    ++ +++G
Sbjct: 177 LNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDG 236

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +CK+++ ++A  ++  +   G  P +VTY+ LI G    G+L+ A  +  ++      P+
Sbjct: 237 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPD 296

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    ++ K    L+++  M  +G   +   Y +++ A  K  R+ +A   + 
Sbjct: 297 VYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLT 356

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++   G++ ++ +Y  LI+  C  GKLE A  + +++  +G++    T+ ++  G CK G
Sbjct: 357 KLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKG 416

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
               A   L  M + G   + + Y  I   L K G+ D A  +    E+
Sbjct: 417 LFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECEI 465



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 4/238 (1%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N I Y++       N      + + + + R+  T     +  ++ + VK           
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   G++ ++V+ N LIN +C+ G +  A+ +  ++ K G+  +  T T LI GLC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G I  A    + +  +GF  N  +Y  ++D L K G+   A+++   ++ K    +   Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           S+++  +CK K +  A  L    +  G+        A++ G    G  ++A  + +K+
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM 288


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 191/405 (47%), Gaps = 46/405 (11%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + NI +  FCK   +  A+ +  +  +  + P VV++N LI+ YC+  + D G+ +
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            ++M ++   PDV TY++LI    + + +  +  L DEM + G+ P+   + +L+H   +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ D     +Q M+   L P    +N ++NG CKN     A  +  G+ + G  P+ +T
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI G C+ G + TA                                   LEI   M 
Sbjct: 418 YTTLIDGFCRGGDVETA-----------------------------------LEIRKEMD 442

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           + G   D  G+  ++    K GR+ +A   + +M+  G++ D V+Y  +++ +CK+G  +
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
             + LL EM+  G      T+ +L++GLCK G +K A + L+ M  IG   +   YN ++
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562

Query: 365 DRLGKDGKIDHA------INVFESMEVKDSFTYSSMVHNLCKAKR 403
                +G   HA      I   E   V D  +Y S+V+ L +A +
Sbjct: 563 -----EGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASK 602



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 161/322 (50%), Gaps = 4/322 (1%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+L+ G P +V+ +N LM+   + G   +A +VF ++    L P   +FN ++NG CK  
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   R+   ++K    P++ TY+ LI  LCK  ++  A  +  E+   G  PN + +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    RN +  L  E    M  KG   D   Y T++  F K G L  A + ++ M+  
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D ++Y TLI+ +C+ G +E A  +  EM++ G E D+   + L+ G+CK G +  A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
              L  M + G   +   Y  ++D   K G       + + M+    V    TY+ +++ 
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
           LCK  ++ +A  LL + L  GV
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGV 551



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 8/217 (3%)

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +EIL A    G+  + + +  ++  F K G + +A    +++    +Q  +VS+NTLIN 
Sbjct: 229 MEILDA----GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           YCK G L+  + L  +MEK     D +T++ LI+ LCK   + GA    + M K G   N
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
              +  ++    ++G+ID     ++ M  K    D   Y+++V+  CK   L +A  ++ 
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             ++ G+R  K     ++DG    G    A +I+ ++
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 39/272 (14%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           GF   +  +NIL+   CK G +  A+ +  E+      P  +++ T++            
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN----------- 283

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
                            GYC       K+G L E      QM     + D+ +Y+ LIN 
Sbjct: 284 -----------------GYC-------KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            CKE K++ A+ L DEM K+G   +    T LI G  + G I   +   + M   G   +
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           +  YN +V+   K+G +  A N+ + M  +    D  TY++++   C+   + +A ++  
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
              ++G+ + +    A+V G+   G   +A++
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 180/332 (54%), Gaps = 3/332 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
           C+A RL+   A + + I+ G   + + +  L+ + C +  + +A   +L RM E G +P 
Sbjct: 109 CRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPH 168

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           V +YN L+ G    S    +L+LL  M + G   PPDV SY++++  LF+ G  D+A   
Sbjct: 169 VFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYST 228

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           + +M+   + P   T+N ++  LCK +  D A+ +   + K+G +P+ +TYN ++ G C 
Sbjct: 229 YHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCS 288

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           +G+ + A  IL+++   G  P+A+TYT++M    +N +     +IL +M ++G   +   
Sbjct: 289 SGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVIT 348

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++  +   G L E  D ++ MV +G+Q D   ++ LI    K   ++ A  +  +M 
Sbjct: 349 YSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMR 408

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +Q    D  T+  LIDGLCK+G +  A L+LE
Sbjct: 409 QQRLTPDVVTYGTLIDGLCKSGRVDDAMLNLE 440



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 167/344 (48%), Gaps = 3/344 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            V P + TY +LI   C+    D G+  L  + + G   + + +  L+         S +
Sbjct: 93  AVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNA 152

Query: 97  LDL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIM 153
           +++ L  M E+G  P V+SYN L+  L    +  EA  +   M    GD  P   +++ +
Sbjct: 153 MNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTI 212

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++GL K   +D A   +  + + G +P++VTYN ++  LCKA  +  A  +L  +  +G 
Sbjct: 213 IDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGV 272

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ ITY +I+     + + K  + IL  M   G   D   Y +++    K GR  EA  
Sbjct: 273 MPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARK 332

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            ++ M+  G++ ++++Y+TL++ Y  +G L     LLD M + G + D++  +ILI    
Sbjct: 333 ILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACT 392

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           K  N+  A      M +     ++  Y  ++D L K G++D A+
Sbjct: 393 KHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 101/191 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CKA  ++KA  ++   ++ GV+PD +TYN ++  YC          IL +M  
Sbjct: 245 NTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCS 304

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD VTY SL+    +N     +  +LD M++ G+ P+V +Y++L+H     G   E
Sbjct: 305 DGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVE 364

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +   M+   + P    F+I++    K++  D A+ +F  +++    P++VTY  LI 
Sbjct: 365 MRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLID 424

Query: 191 GLCKAGRLRTA 201
           GLCK+GR+  A
Sbjct: 425 GLCKSGRVDDA 435



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 115/260 (44%), Gaps = 8/260 (3%)

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC- 226
           RM R        P L TY ILI   C+AGRL      L  +   G+    I +T ++K  
Sbjct: 85  RMARS-SDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSL 143

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQ 284
           C   R       +L  M   G     F Y  ++       R +EA + +  M  DG    
Sbjct: 144 CAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCP 203

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D+VSY+T+I+   KEG  + AY    EM ++G   D  T+  ++  LCKA  +  A   
Sbjct: 204 PDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDV 263

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
           L  M K G   +   YN IV      G+   AI + E M       D+ TY+S++  LCK
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323

Query: 401 AKRLPSASKLLLSCLKSGVR 420
             R   A K+L S +K G++
Sbjct: 324 NGRCIEARKILDSMIKRGLK 343



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 7/243 (2%)

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D    P   TY  ++ CC R  +  LG   L  + +KGY  +   +  ++ +     R  
Sbjct: 91  DGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTS 150

Query: 270 EATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHT 326
            A + + + +T+ G    + SYN L+   C E + + A  LL  M   G +C  D  +++
Sbjct: 151 NAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYS 210

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
            +IDGL K G+   A      M + G   ++  YN IV  L K   +D A++V   M   
Sbjct: 211 TIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN 270

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
             + D  TY+S+VH  C + +   A  +L      GV        +++D L  +G   EA
Sbjct: 271 GVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEA 330

Query: 443 KKI 445
           +KI
Sbjct: 331 RKI 333



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 7/202 (3%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY-LLLDEM 313
           Y  +I    + GRL      +  ++  G +++ + +  L+   C E +   A  ++L  M
Sbjct: 101 YGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRM 160

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYNCIVDRLGKDG 371
            + G     +++ IL+ GLC     + A   L  M   G D   ++ +Y+ I+D L K+G
Sbjct: 161 TELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEG 220

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
             D A + +  M     + D  TY+++V  LCKA+ +  A  +L   +K+GV        
Sbjct: 221 DSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYN 280

Query: 428 AVVDGLRHSGCRREAKKIQSKI 449
           ++V G   SG  +EA  I  K+
Sbjct: 281 SIVHGYCSSGQSKEAIGILEKM 302


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 201/414 (48%), Gaps = 6/414 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+  +L+ A + + + +  G+   V  YN LI+ +C+F    A    +  M  
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P VVTY SL+ G      ++ +L L  EM   GI P ++++ +L+  LF+ G   +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++F +M   ++ P   T+N+M+ G C+      A    + + + G VP+  +Y  LI 
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G+   A+  +  L       N I YT ++    R  K +  L +   M ++G   
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I   +K    K     +++M   G++ D V Y ++I+   K G  + A+ + 
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M  +G   ++ T+T +I+GLCKAG +  A +    M  +    N   Y C +D L K 
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK- 764

Query: 371 GKID--HAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           G++D   A+ +  ++    + ++ TY+ ++   C+  R+  AS+L+   +  GV
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 187/413 (45%), Gaps = 8/413 (1%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D + +G+ PDV  Y  +I + C+         ++  M   G   ++V YN LI G  +  
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +  ++ +  ++    + PDV +Y +L++ L ++ + +    +  +M+C   +P  A  +
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            ++ GL K    + AL + + +   G  P L  YN LI  LCK  +   A  +   +G  
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  PN +TY+ ++    R  K    L  L  M   G     + Y ++I    K G +  A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             +M +M+   ++  +V+Y +L+  YC +GK+  A  L  EM  +G     YT T L+ G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
           L +AG I+ A      M +     N   YN +++   ++G +  A    + M     V D
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576

Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
           +++Y  ++H LC   +  S +K+ +  L  G   L    +    GL H  CR 
Sbjct: 577 TYSYRPLIHGLCLTGQ-ASEAKVFVDGLHKGNCEL---NEICYTGLLHGFCRE 625



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 182/373 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  ++ +A  I  D     + PDVVTY  L+   C+   F+ G  +++ M  
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SP     +SL+ G  +   +  +L+L+  +++ G+ P+++ YN+L+  L +  K  E
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    L P   T++I+++  C+    D AL     +   G    +  YN LI 
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G +  A   + E+ +    P  +TYT++M       K    L +   M  KG   
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             + + T+++   + G +++A     +M    V+ + V+YN +I  YC+EG +  A+  L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM ++G   D Y++  LI GLC  G    A++ ++ ++K   + N   Y  ++    ++
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625

Query: 371 GKIDHAINVFESM 383
           GK++ A++V + M
Sbjct: 626 GKLEEALSVCQEM 638



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 198/427 (46%), Gaps = 14/427 (3%)

Query: 30  IIDGI--------RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           ++DG+        ++ +LP+V T + L+    +F  F     + N M   GI PDV  Y 
Sbjct: 172 VLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYT 231

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            +I        LS + +++  M   G   ++  YN L+  L +  K  EA  + +D+   
Sbjct: 232 GVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK 291

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           DL P   T+  ++ GLCK +  +  L M   +    F P     + L++GL K G++  A
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             ++K + D G +PN   Y  ++    + RK+     +   M + G   +   Y  +I  
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F + G+L  A  ++ +MV  G++L +  YN+LIN +CK G + AA   + EM  +  E  
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 322 KYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
             T+T L+ G C  G I K  RL+ E   K G   ++  +  ++  L + G I  A+ +F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 381 ESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
             M    VK +  TY+ M+   C+   +  A + L    + G+     + + ++ GL  +
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590

Query: 437 GCRREAK 443
           G   EAK
Sbjct: 591 GQASEAK 597



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 207/453 (45%), Gaps = 10/453 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS    N  +   CK   +  AE  + + I   + P VVTY  L+  YC     +    
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M   GI+P + T+ +L++G  R  L+  ++ L +EM E  + P+  +YN ++    
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G   +A    ++M    + P T ++  +++GLC       A     GL K       +
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y  L+ G C+ G+L  A  + +E+   G   + + Y  ++    +++  KL   +L  M
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G   D   Y ++I A  K G  KEA    + M+ +G   + V+Y  +IN  CK G +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI---KGARLHLEYMNKIGFDSNLEAY 360
             A +L  +M+      ++ T+   +D L K G +   K   LH   +   G  +N   Y
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILK--GLLANTATY 790

Query: 361 NCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N ++    + G+I+ A  +   M       D  TY++M++ LC+   +  A +L  S  +
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            G+R  + A   ++ G   +G   +A ++++++
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 135/272 (49%), Gaps = 10/272 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC+  +LE+A ++  + ++ GV  D+V Y +LID   +       + +L  M + G+ PD
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y S+I   ++      +  + D M+  G  P+  +Y ++++ L + G  +EA     
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA----- 736

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-----GFVPELVTYNILIKG 191
           +++C  + P ++  N +  G   +  T   + M + ++ H     G +    TYN+LI+G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C+ GR+  A  ++  +   G +P+ ITYTT++    R    K  +E+ ++M  KG   D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
              Y T+I      G + +AT+   +M+  G+
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 5/288 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           F++++    ++R   + + +F+ +  K   +PE+ T + L+ GL K      A  +  ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  P+   YT +++     +      E+++ M+  G   +   Y  +I    K  ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA    + +    ++ D+V+Y TL+   CK  + E    ++DEM    F   +   + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           ++GL K G I+ A   ++ +   G   NL  YN ++D L K  K   A  +F+ M     
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             +  TYS ++   C+  +L +A   L   + +G+++      ++++G
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 2/190 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL- 92
           I  G +P+ VTY  +I+  C+    +    + ++M+     P+ VTY   +   T+  + 
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  +++L + +L+ G+  +  +YN L+    + G+ +EA+ +   MI   ++P   T+  
Sbjct: 769 MQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           M+N LC+      A+ ++  + + G  P+ V YN LI G C AG +  A  +  E+   G
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887

Query: 213 HAPNAITYTT 222
             PN  T  T
Sbjct: 888 LIPNNKTSRT 897



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 63/118 (53%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           + I  G+L +  TYNMLI  +C+    +    ++ RM   G+SPD +TY ++I    R +
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
            +  +++L + M E GI PD  +YN+L+H     G+  +A  +  +M+   L P   T
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 55/106 (51%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N+ +  FC+  R+E+A  +I   I  GV PD +TY  +I+  C+         + 
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
           N M E GI PD V YN+LI G      +  + +L +EML  G+ P+
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 187/374 (50%), Gaps = 3/374 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  + E A+    +   +G+LPDV+TYN L++ YC+  +      +L  +R 
Sbjct: 347 NAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRR 406

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG++P V+TYN+LI G  R   L+ +  L +EM+E G  PDV +Y  LM+   ++     
Sbjct: 407 AGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAM 466

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M+   L P    +N  +        T  A ++   +   G  P+ VTYN++I 
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIID 526

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G L+ A+ +  ++   G  P+ ITYT ++         +   ++L+ M   G   
Sbjct: 527 GLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQP 586

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
               Y  ++    + G L  A  +  +M+  G++ + ++YN LI+  C  G+   A+   
Sbjct: 587 SVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHF 646

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            EM ++G   +KYT+T+LIDG C+ GN   A RL+ E M++ G   +   +N +      
Sbjct: 647 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFE-MHQNGIPPDYCTHNALFKGF-D 704

Query: 370 DGKIDHAINVFESM 383
           +G + HAI   E++
Sbjct: 705 EGHMYHAIEYMENI 718



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 202/453 (44%), Gaps = 40/453 (8%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE--AGISPDV 77
           A R +   A+  + ++L V P +VTYN L+D++ +    D    +L  M     G S + 
Sbjct: 215 AARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLND 274

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEM-------------------------------LEM 106
           VT+N +I+   R   L  ++ L+D M                               +EM
Sbjct: 275 VTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEM 334

Query: 107 ---GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI P V +YN+++H L +  + + A   F +M    L P   T+N +LN  CK    
Sbjct: 335 ENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNL 394

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +   L++ G  P ++TYN LI G C+ G L  AR + +E+ + G  P+  TYT +
Sbjct: 395 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTIL 454

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           M    + R   +  E    M  KG   D F Y T I A + +     A    E M+  G+
Sbjct: 455 MNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGI 514

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V+YN +I+  CK G L+ A  L  +M   G + D  T+T LI   C+ G ++ AR 
Sbjct: 515 YPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EV---KDSFTYSSMVHNLC 399
            L  M   G   ++  Y  +V    + G +  A   F  M +V    +  TY+ ++H LC
Sbjct: 575 LLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 634

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
              R P A +     L+ G+   K     ++DG
Sbjct: 635 MTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDG 667



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 178/380 (46%), Gaps = 7/380 (1%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G++PDV   N ++      +       +  EML++ + P + +YN+L+    + G+ DEA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 132 NRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           + + ++M    G  +    TFN++++ L +  + +NA+++   ++         TYN LI
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF-TYNPLI 315

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L + G +R A  +  E+ + G  P  +TY  I+    +  + +      + M+  G  
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y +++  + K G LKEA   +  +   G+   +++YNTLI+ YC+ G L  A  L
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +EM +QG   D  T+TIL++G  K  N+  AR   + M   G   +  AYN  +     
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT 495

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
                 A  + E M +K    D+ TY+ ++  LCK   L  A +L    +  G++     
Sbjct: 496 LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT 555

Query: 426 QKAVVDGLRHSGCRREAKKI 445
              ++      G  REA+K+
Sbjct: 556 YTCLIHAHCERGLLREARKL 575



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 150/357 (42%), Gaps = 42/357 (11%)

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ + C  + P     N +L  L      D+   ++  + +    P +VTYN L+    
Sbjct: 189 AFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFL 248

Query: 194 KAGRLRTARWILKELGDS--GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           K GR   A  +LKE+     G + N +T+  ++    R    +  ++++ +M R      
Sbjct: 249 KEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKAS 307

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ--------------------------- 284
            F Y  +I A ++ G +++A     +M  +G+                            
Sbjct: 308 SFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA 367

Query: 285 --------LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
                    D+++YN+L+N YCK G L+ A  LL ++ + G      T+  LIDG C+ G
Sbjct: 368 EMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           ++  AR   E M + G   ++  Y  +++   K   +  A   F+ M  K    D F Y+
Sbjct: 428 DLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +         P A +L    +  G+         ++DGL  +G  ++AK++++K+
Sbjct: 488 TRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 212/449 (47%), Gaps = 7/449 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R++ A  +  +   +   PDVVTY +++  YC     +    +L+ M  
Sbjct: 257 NILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + V Y S+IA       +S ++ ++++M+  G+  D   + ++M    + G    
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M    L     T+  ++NGLC+      A R+ + ++  G   + VTY +LI 
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A  +  ++      PN +TYT +     +        E+L  M  KG   
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y ++I    K G L++A   M  M   G++ D+ +Y T+I   C+  +L+ A+ LL
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G +    T+ +L++G C +G ++G +  LE+M +     N   YN ++ +   +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +     +++ M     V +  TY+ ++   CKA+ +  A       ++ G R+  S+ 
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A++  L       EA+++  K+R  +++
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLT 702



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           +YN+L+ A C        + + + M      PDVVTY  ++ G    S L  ++ LL EM
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G+  +  +Y S++  L   G+  +A RV +DM+   +    A F  +++G C+    
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A   F  +QK G   + VTY  LI GLC+AG L+ A  +L+E+ D G   +A+TYT +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  K      + + M +K  T +   Y  +     K G +  A + + +M + G+
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +L+I +YN+LIN  CK G LE A   + +M++ G + D YT+T +I  LC++  +  A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L+ M   G    +  YN +++     G+++    + E M  K    ++ TY+S++   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 400 KAKRLPSASKL 410
             K + S +++
Sbjct: 612 IEKNMKSTTEI 622



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 26/426 (6%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQF----VSFD------AGYTILNRMREAGISP 75
           A AI++  +R    P        I  Y  F    VSFD          +L R+R+ GISP
Sbjct: 166 ARAILVRALRFPS-PHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSAPLLLRLRQYGISP 224

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
              + N+++        L  ++ L  E+ E     +  SYN L+  L   G+  +A+++F
Sbjct: 225 SPESCNAVLCRLP----LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLF 276

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      P   T+ IM++G C     + A+++   +   G     V Y  +I  LC  
Sbjct: 277 DEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDE 333

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  A  +++++   G   +A  +TT+M    R             M+++G   DG  Y
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    + G LKEA   +++M   G+ +D V+Y  LI+ YCK GK+  A+L+ ++M +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T+T L DGLCK G++  A   L  M   G + N+  YN +++ L K G ++ 
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+     M+      D +TY++++  LC++K L  A  LL   L  G++        +++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573

Query: 432 GLRHSG 437
           G   SG
Sbjct: 574 GFCMSG 579



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 1/385 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C   ++  A  ++ D +  GV+ D   +  ++  +C+     A     + M++ G+
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           + D VTY +LI G  R   L  +  +L EM + G+  D  +Y  L+    ++GK  EA  
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M+   +TP   T+  + +GLCK      A  +   +   G    + TYN LI GLC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG L  A   + ++ ++G  P+  TYTTI+    ++++      +L  M  KG      
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  F   GR++     +E M+   +  +  +YN+L+  YC E  +++   +   M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             Q    ++ T+ ILI G CKA N+K A      M + GF     +YN ++  L K  K 
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 374 DHAINVFESMEVKDSFTYSSMVHNL 398
             A  +FE M  K+  T    V+N 
Sbjct: 687 TEARRLFEKMR-KERLTAEPDVYNF 710



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 140/297 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++ +A  +    ++  V P+VVTY  L D  C+     A   +L+ M   G+  +
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYNSLI G  +   L  ++  + +M E G+ PDV++Y +++  L Q  + D A+ + Q
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T+N+++NG C +   +   R+   + +    P   TYN L+K  C   
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +++   I K +      PN  TY  ++K   + R  K  L   S M  KG+      Y 
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +I    K  +  EA    E+M  + +  +   YN  I+L   E  LE+   L DE+
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D   Q+  +  + +  SYN L+   C  G+++ A+ L DEM       D  T+ I++ G 
Sbjct: 239 DEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGY 295

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
           C    ++ A   L  M   G + N  AY  ++  L  +G++  A+ V E M     V D+
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDA 355

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +++++   C+   L +A        K G+        A+++GL  +G  +EA+++
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FC + R+E  + ++   +   + P+  TYN L+  YC   +  +   I   M  
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN LI G  +   +  +L    EM+E G      SYN+L+  L +  K  E
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 131 ANRVFQDMICGDLTPCTATFNIMLN 155
           A R+F+ M    LT     +N  ++
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYID 713


>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 913

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 186/406 (45%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +++ +  V  +      + A  ++    R   +P +   N L+++  +    D    +  
Sbjct: 163 SKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYK 222

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +++  G+SP+  TY  +I     N  L  ++ ++ EM E GI P  ++Y + +  L    
Sbjct: 223 QLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNE 282

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             D   +V Q     ++      + + + G C     D A  + R ++K G VP++  Y 
Sbjct: 283 MSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYT 342

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI   CKAG L  A   L E+   G   N +   +I+ C      +   ++  +  K  
Sbjct: 343 ALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSL 402

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   DG  Y  V+ A  K+G+L+EA   +++M    + +D++ Y TLIN YC +G +  A
Sbjct: 403 GLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDA 462

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + + +EM + G E D  T+ +L+ G C+ G    A   L+YM       N   YN +V+ 
Sbjct: 463 FKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVES 522

Query: 367 LGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           L   GK+  A  VF S+E K    Y +M++  CKA     A+KL  
Sbjct: 523 LCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAGAAKLFF 568



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 27/415 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CK  +LE+A  ++ +     +  DV+ Y  LI+ YC   +    + +   MRE
Sbjct: 412 NNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRE 471

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  DVVTY+ L++G  RN L + +L+LLD M    + P+  +YN ++  L   GK  E
Sbjct: 472 NGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKE 531

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  +    L      +  M+NG CK  +T  A ++F  L   G V     YN+L K
Sbjct: 532 AEAVFNSIEDKSLD----NYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLL-K 586

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN---RKYKLGLEILSAMKRKG 247
            LC+ G       +L+ + +    P+   Y  +     R       +    +   + ++G
Sbjct: 587 NLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRG 646

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-------- 299
           +T D   Y  +I ++ ++  LKEA D    M   G++ D+V++  L++ + K        
Sbjct: 647 WTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYS 706

Query: 300 -------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
                     +  A  +  EM+    + D   +T+LIDG CK  ++  A    + M + G
Sbjct: 707 AANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERG 766

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
            + ++  Y  ++    + G +D A+N+ + M +K    D+ T S+++H + K ++
Sbjct: 767 LEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKTRQ 821



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 43/291 (14%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           ++GKL T L     C    A  + KA+++    ++ G  PD++ Y ++I +YC+      
Sbjct: 615 IYGKLFTSL-----CRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKE 669

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              + + M++ GI PD+VT+  L+ G  +  +                   V+S  +   
Sbjct: 670 AVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHI-----------------KKVYSAANA-- 710

Query: 121 CLFQLGKPD--EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
              + G  D  +A  ++ +M   ++ P    + ++++G CK     +A+ +F  + + G 
Sbjct: 711 ---KGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGL 767

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P+++TY  L+ G C+ G +  A  +L ++   G +P+  T + ++    + R+      
Sbjct: 768 EPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKTRQ------ 821

Query: 239 ILSAMKRKGYTFDGFG------YCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
             SA +   Y FDG+       +C ++ A    G +    + +     D V
Sbjct: 822 -CSAPQCLKY-FDGYSLSICHIFCRIVQACYITGSIPSELENLSNFNLDDV 870



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 112/290 (38%), Gaps = 33/290 (11%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL----GDSGHAPNAIT- 219
           +AL  F  L+  GF  ++ TY  +I+ LC  G  +  R I  ++     +    P  I+ 
Sbjct: 82  SALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEISH 141

Query: 220 ------------------------YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
                                   Y  ++K       +   +++L  M R+ +    F  
Sbjct: 142 FLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFIC 201

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             ++ + +K  +L  A    +Q+   G+  +  +Y  +I   C  G LE A  ++ EME+
Sbjct: 202 NFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEE 261

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G     + +T  I+GLC           L+         ++ AY   V     + K D 
Sbjct: 262 SGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDK 321

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
           A +V   ME    V D   Y++++   CKA  L  A   L   +  GV++
Sbjct: 322 AESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKV 371


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 206/442 (46%), Gaps = 9/442 (2%)

Query: 16  TFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG-- 72
           T C   R   A  I+I    +LG  PDV +Y +L+   C     +    +++ M E G  
Sbjct: 57  TLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDH 116

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
             P+VV+Y ++I G  +   +  +  L  EML+ GIPPDV + NS++  L ++   D+A 
Sbjct: 117 CPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAE 176

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V + M    + P   T+N +++G   +     A+R+ + + +HG  P  VTY++LI  L
Sbjct: 177 EVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCL 236

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK G    AR IL  +  S   PN  TY  ++              ++  M + G   D 
Sbjct: 237 CKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDH 296

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             +   I A+VK GRL EA     +M   G+  DI+SY T+I+  CK G+L+AA     +
Sbjct: 297 HIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQ 356

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           M   G   D    T LI G    G   K   L  E M++ G    +  +  ++D+L K+G
Sbjct: 357 MIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDR-GIRPTVVVFTTMIDKLFKEG 415

Query: 372 KIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K+  A  +F+ M +     +  +Y++++H    A +L    KLL   L  G++       
Sbjct: 416 KVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFN 475

Query: 428 AVVDGLRHSGCRREAKKIQSKI 449
            ++D +   G + +     + I
Sbjct: 476 TLLDDMLSMGLKPDVATCNTLI 497



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 170/374 (45%), Gaps = 16/374 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK   ++KAE ++       ++PD  TYN L+  Y           IL +M   G  P+
Sbjct: 166 LCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPN 225

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY+ LI    +    + + ++L+ M++    P+V +Y  L+H     G   E N +  
Sbjct: 226 GVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLID 285

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   + P    FNI +    K    D A+  F  +++ G +P++++Y  +I GLCK G
Sbjct: 286 LMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIG 345

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           RL  A     ++ D G +P+ + +T ++       K++   E+   M  +G       + 
Sbjct: 346 RLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFT 405

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    K G++ EA    + M    V+ ++VSYN +I+ Y   GKL+    LLD+M   
Sbjct: 406 TMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSV 465

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + +  T   L+D                 M  +G   ++   N ++D   +DG+I+  
Sbjct: 466 GLKPNAVTFNTLLDD----------------MLSMGLKPDVATCNTLIDSCCEDGRIEDV 509

Query: 377 INVFESMEVKDSFT 390
           + +F  M  K + T
Sbjct: 510 LTLFREMLSKAAKT 523



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 18/330 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  +  + +L++A  I+    R G  P+ VTY+MLID  C+F        ILN M +
Sbjct: 195 NSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQ 254

Query: 71  AGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +  +P+V TY  L+ G AT+  L+  + +L+D M++ G+ PD   +N  ++   + G+ D
Sbjct: 255 SRGNPNVATYGGLLHGYATKGDLVEMN-NLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLD 313

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA   F  M    L P   ++  M++GLCK    D A+  F  +   G  P++V +  LI
Sbjct: 314 EAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLI 373

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G    G+   A  +  E+ D G  P  + +TT++   F+  K      +   M      
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVK 433

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I  +   G+L E    ++ M++ G++ + V++NT                L
Sbjct: 434 PNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT----------------L 477

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           LD+M   G + D  T   LID  C+ G I+
Sbjct: 478 LDDMLSMGLKPDVATCNTLIDSCCEDGRIE 507



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 186/424 (43%), Gaps = 7/424 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P  VTY +LI   C     +  +  L ++ + G+  + +++  ++         S ++
Sbjct: 9   VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68

Query: 98  DLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGD-LTPCTATFNIML 154
           +++     ++G  PDV+SY  L+  L    K +EA  +   M   GD   P   ++  ++
Sbjct: 69  NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G  K      A  +F  +   G  P++VT N +I GLCK   +  A  +L+++ D    
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TY +++     + + K  + IL  M R G   +G  Y  +I    K G   EA + 
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +  M+      ++ +Y  L++ Y  +G L     L+D M + G   D +   I I    K
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK 308

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G +  A L    M + G   ++ +Y  ++D L K G++D A++ F  M       D   
Sbjct: 309 CGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVV 368

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +++++H      +   A +L    +  G+R        ++D L   G   EAK +   + 
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428

Query: 451 MAKI 454
           +A +
Sbjct: 429 IASV 432



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 100/251 (39%), Gaps = 42/251 (16%)

Query: 209 GDSGHAPNAITYTTIMKCC-----------FRNRKYKLG-----------LEILSAMKRK 246
           G    AP  +TYT ++ CC              +  K G           L  L A KR 
Sbjct: 5   GSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRT 64

Query: 247 --------------GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSY 290
                         G T D F Y  ++       + +EA D +  M  DG     ++VSY
Sbjct: 65  SDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSY 124

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
            T+I+ + KE ++  AY L  EM  +G   D  T   +IDGLCK   +  A   L  M  
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFD 184

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPS 406
                +   YN +V      G++  A+ + + M    +  +  TYS ++  LCK      
Sbjct: 185 KHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTE 244

Query: 407 ASKLLLSCLKS 417
           A ++L S ++S
Sbjct: 245 AREILNSMIQS 255



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 19/156 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F    + EKAE +  + +  G+ P VV +  +ID   +        T+ + M  A + P+
Sbjct: 376 FSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPN 435

Query: 77  VVTYNSLIAG-----------ATRNSLLSCSLD--------LLDEMLEMGIPPDVWSYNS 117
           VV+YN++I G              + +LS  L         LLD+ML MG+ PDV + N+
Sbjct: 436 VVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNT 495

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           L+    + G+ ++   +F++M+       T T NI+
Sbjct: 496 LIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 191/409 (46%), Gaps = 37/409 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FCKA ++++A   + +   +G+  D+V Y  LI  +C     D G  + + + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G SP  +TYN+LI G  +   L  + ++ + M+E G+ P+V++Y  L+  L  +GK  EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL--- 188
            ++   MI  D  P   T+NI++N LCK+    +A+ +   ++K    P+ +TYNIL   
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 189 ----------------------------------IKGLCKAGRLRTARWILKELGDSGHA 214
                                             I GLCK  RL  A  I   L +   A
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + +T   ++    +       +E+   +       +   Y  +I  F K G L  A   
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M    +Q  +  YN L++  CKEG L+ A+ L +EM++     D  +  I+IDG  K
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           AG+IK A   L  M++ G   +L  Y+ +++R  K G +D AI+ F+ M
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 41/450 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+     KA +++ +  R  ++PDV +YN +I  +C+    +    + N M+ 
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G S  +VT+  LI    +   +  ++  L EM  MG+  D+  Y SL+      G+ D 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F +++    +PC  T+N ++ G CK      A  +F  + + G  P + TY  LI 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G+ + A  +L  + +    PNA+TY  I+    ++      +EI+  MK++    
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYL 308
           D   Y  ++      G L EA+  +  M+ D      D++SYN LI+  CKE +L  A  
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 309 LLD-------------------------------EMEKQGFEC----DKYTHTILIDGLC 333
           + D                               E+ KQ  +     +  T+T +IDG C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---- 389
           K G +  A+  L  M       ++  YNC++  L K+G +D A  +FE M+  ++F    
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +++ M+    KA  + SA  LL+   ++G+
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 206/421 (48%), Gaps = 6/421 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           + V+ + L++ Y Q       + +L  M + G + +V  +N L+ G  RN     ++ LL
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM    + PDV+SYN+++    +  + ++A  +  +M     +    T+ I+++  CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A+   + ++  G   +LV Y  LI+G C  G L   + +  E+ + G +P AITY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+++   +  + K   EI   M  +G   + + Y  +I     +G+ KEA   +  M+ 
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
              + + V+YN +IN  CK+G +  A  +++ M+K+    D  T+ IL+ GLC  G++  
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 341 AR--LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSM 394
           A   L+L   +    D ++ +YN ++  L K+ ++  A++++    E +   D  T + +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +++  KA  +  A +L      S +        A++DG   +G    AK +  K+R++++
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 455 S 455
            
Sbjct: 526 Q 526



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 2/379 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  +L++A  I    I  GV P+V TY  LID  C          +LN M E
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P+ VTYN +I    ++ L++ ++++++ M +    PD  +YN L+  L   G  DE
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 131 ANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           A+++   M+       P   ++N +++GLCK      AL ++  L +     + VT NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +    KAG +  A  + K++ DS    N+ TYT ++    +     +   +L  M+    
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
               F Y  ++++  K G L +A    E+M  D    D+VS+N +I+   K G +++A  
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL  M + G   D +T++ LI+   K G +  A    + M   GF+ +    + ++    
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645

Query: 369 KDGKIDHAINVFESMEVKD 387
             G+ D    + + +  KD
Sbjct: 646 SQGETDKLTELVKKLVDKD 664



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 160/340 (47%), Gaps = 39/340 (11%)

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N+LM  L +    + A   ++ M+  D      + + +L    + R T  A  +   + K
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            GF   +  +NIL+KGLC+      A  +L+E+  +   P+  +Y T+++     ++ + 
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV------- 288
            LE+ + MK  G ++    +  +I AF K G++ EA  ++++M   G++ D+V       
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 289 ----------------------------SYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
                                       +YNTLI  +CK G+L+ A  + + M ++G   
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           + YT+T LIDGLC  G  K A   L  M +   + N   YN I+++L KDG +  A+ + 
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           E M+ +    D+ TY+ ++  LC    L  ASKLL   LK
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 151/327 (46%), Gaps = 2/327 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   +  A  I+    +    PD +TYN+L+   C     D    +L  M +
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 71  AG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
                 PDV++YN+LI G  + + L  +LD+ D ++E     D  + N L++   + G  
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +++ +    +   + T+  M++G CK    + A  +   ++     P +  YN L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LCK G L  A  + +E+    + P+ +++  ++    +    K    +L  M R G 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D F Y  +I  F+K+G L EA  + ++MV  G + D    ++++     +G+ +    
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKA 335
           L+ ++  +    DK     ++D +C +
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNS 682


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 193/404 (47%), Gaps = 3/404 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I + +FC+   ++ A   +    +  +   V  YN LI+ YC+  +  A     + M +
Sbjct: 231 SILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID 290

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P VVTY SLI+G         +  + +EM   GI P+ +++ +++  L +     E
Sbjct: 291 KGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAE 350

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F +M    + P   T+N+M+ G C++     A  +   +   GFVP+  TY  LI 
Sbjct: 351 AIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLIS 410

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  GR+  A+  + +L    H  N + Y+ ++    +  ++K  +     M  +G   
Sbjct: 411 GLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAM 470

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I    +    +     +++M   G++ D V Y  +I+ + K G L+ A+ L 
Sbjct: 471 DLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLW 530

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M  +G   +  T+T LI+GLCKAG +  A L  +         N   Y C +D L + 
Sbjct: 531 DIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRG 590

Query: 371 GKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           G ++ A+ +  +M    +  + +Y+ ++   C+  ++  A+KLL
Sbjct: 591 GNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLL 634



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 208/447 (46%), Gaps = 13/447 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS  + N+ +   CK+ R+ +A  I    ++ G+  +VVTY         +  F+    
Sbjct: 163 KLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAEL 213

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M E G+  + +TY+ LI    R   +  ++  LD+M +  I   V+ YNSL++   
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +LG    A   F +MI   LTP   T+  +++G C       A +++  +   G  P   
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T+  +I GLC+A  +  A  +  E+ +    P+ +TY  +++   R+        +L  M
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG+  D + Y  +I+    +GR+ EA ++++ +  D  +L+ + Y+ L++ YCKEG+ 
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A      M ++G   D   + ILIDG  +  + +     L+ M+  G   +   Y  +
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +DR  K G +  A  +++ M     + +  TY+++++ LCKA  +  A  L    L S V
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDV 573

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQ 446
                     +D L   G   +A ++ 
Sbjct: 574 TPNHITYGCFLDHLTRGGNMEKAVQLH 600



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 181/380 (47%), Gaps = 15/380 (3%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M++  + P+V T ++L+ G  R    +  L L D+++   + PD++ Y++++  L +L  
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            ++A  +   M           +N++++GLCK+R    AL +   L + G    +VTY  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY-- 204

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
                   G+   A  + KE+G+ G   N ITY+ ++    R  +    +  L  M +  
Sbjct: 205 -------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
             F  + Y ++I  + K+G    A  Y ++M+  G+   +V+Y +LI+ YC EG+   A+
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDR 366
            + +EM  +G   + YT T +I GLC+A  +  A RL  E   +    S +  YN +++ 
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEV-TYNVMIEG 376

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             + G I  A ++ + M     V D++TY  ++  LC   R+  A + +    K   ++ 
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLN 436

Query: 423 KSAQKAVVDGLRHSGCRREA 442
                A+V G    G  ++A
Sbjct: 437 NMCYSALVHGYCKEGRFKDA 456



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 166/347 (47%), Gaps = 9/347 (2%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D +   V PD+  Y+ ++ + C+   F+    +++ M        +V YN LI G  ++ 
Sbjct: 121 DIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSR 180

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            +  +L++ + +++ G+  +V +Y          GK +EA  +F++M    L     T++
Sbjct: 181 RIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYS 231

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I+++  C+    DNA+     + K      +  YN LI G CK G    A++   E+ D 
Sbjct: 232 ILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDK 291

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P  +TYT+++       ++    ++ + M  KG + + + +  +I+   +   + EA
Sbjct: 292 GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEA 351

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
                +M    +    V+YN +I  +C+ G +  A+ LLDEM  +GF  D YT+  LI G
Sbjct: 352 IRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISG 411

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           LC  G +  A+  ++ ++K     N   Y+ +V    K+G+   A++
Sbjct: 412 LCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVS 458



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 168/386 (43%), Gaps = 36/386 (9%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T      +   C+AN + +A  +  +     ++P  VTYN++I+ +C+  +    + +L
Sbjct: 331 NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLL 390

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   G  PD  TY  LI+G      +S + + +D++ +     +   Y++L+H   + 
Sbjct: 391 DEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKE 450

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------- 178
           G+  +A    + M+   +      + I+++G  +   T     + + +  HG        
Sbjct: 451 GRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIY 510

Query: 179 ----------------------------VPELVTYNILIKGLCKAGRLRTARWILKELGD 210
                                       +P +VTY  LI GLCKAG +  A  + KE   
Sbjct: 511 TNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLV 570

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           S   PN ITY   +    R    +  +++  AM  KG+      Y  +I  F ++G+++E
Sbjct: 571 SDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCRLGKIEE 629

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           AT  +  M  + +  D ++Y+T+I   CK   L+ A  L   M  +G + D   ++ L+ 
Sbjct: 630 ATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVH 689

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSN 356
           G C AG ++ A    + M + G  SN
Sbjct: 690 GCCIAGELEKAFELRDEMIRRGMRSN 715



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 152/321 (47%), Gaps = 40/321 (12%)

Query: 8   RLLNIC----VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L N+C    V  +CK  R + A +     +  GV  D+V Y +LID   +     A + 
Sbjct: 434 KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFG 493

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+ PD V Y ++I   ++   L  +  L D M++ G  P+V +Y +L++ L 
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  D+A  + ++ +  D+TP   T+   L+ L +    + A+++   + K GF+   V
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTV 612

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +YNILI+G C+ G++  A  +L  + D+   P+ ITY+TI               I    
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTI---------------IYEQC 657

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           KR                      L+EA      M+  G++ D ++Y+ L++  C  G+L
Sbjct: 658 KRSN--------------------LQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGEL 697

Query: 304 EAAYLLLDEMEKQGFECDKYT 324
           E A+ L DEM ++G   +  T
Sbjct: 698 EKAFELRDEMIRRGMRSNHVT 718



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/302 (19%), Positives = 120/302 (39%), Gaps = 45/302 (14%)

Query: 159 KNRYTDNALRMF-----RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           K  + D  L M      R ++    +PE+ T + L+ GL +  R      +  ++  +  
Sbjct: 68  KPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANV 127

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+   Y+ +++     + +    E++  M+          Y  +I    K  R+ EA +
Sbjct: 128 QPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALE 187

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               ++  G++ ++V+Y          GK   A LL  EM ++G   +  T++ILID  C
Sbjct: 188 IKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFC 238

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
           + G         E  N IGF          +D++ K   I+  +           + Y+S
Sbjct: 239 RRG---------EMDNAIGF----------LDKMTK-ASIEFTV-----------YPYNS 267

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           +++  CK     +A       +  G+        +++ G  + G   +A K+ +++    
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 454 IS 455
           IS
Sbjct: 328 IS 329


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 25/426 (5%)

Query: 49  IDAYCQ--FVSFDAGY-TILNRMREAGISPDVVTYNSLIAGATRN------------SLL 93
           +D++C+  FV     + T + +  E    P+V       AG  +              LL
Sbjct: 99  LDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELL 158

Query: 94  SCSLDLLD------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           + S DL+       E+ + G+     + NSL+     LG  +E   V++ M    + P  
Sbjct: 159 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSL 218

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N ++NGL  + + ++A ++F  +     VP+ VTYNI+IKG CKAG+L+ A    ++
Sbjct: 219 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 278

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +      P+ ITY T+++ C+  R +   L +   M+ +G       Y  VI    K  +
Sbjct: 279 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 338

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             EA    E M   G + ++  Y  LI+ Y K G +E A  L + M+ +GFE D  T+++
Sbjct: 339 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 398

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L++GLCK+G +       ++    G   N   Y  ++D LGK G+I+ A N+FE M  K 
Sbjct: 399 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKG 458

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              DS+ Y++++  L K  ++  A  L     + G          ++DGL       EA 
Sbjct: 459 CARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAI 518

Query: 444 KIQSKI 449
           K   K+
Sbjct: 519 KFWDKM 524



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 4/357 (1%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           NSLI       L+   L +   M E GI P +++YN L++ L      + A +VF+ M  
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G + P T T+NIM+ G CK      A+  FR ++     P+ +TY  LI+         T
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              +  E+ + G      +Y+ ++    + RK      +   M +KG   +   Y  +I 
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 366

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           ++ K G ++EA    E+M  +G + D V+Y+ L+N  CK G+L+    L D    +G   
Sbjct: 367 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 426

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +   +  LIDGL KAG I+ A    E M++ G   +   YN I+D L K GKID A+ +F
Sbjct: 427 NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALF 486

Query: 381 ESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             ME     +  +T++ ++  L K  +   A K     +  G+    ++ +A+  GL
Sbjct: 487 GRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 543



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 194/440 (44%), Gaps = 40/440 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+L      N LI ++      +    +  RM+E GI P + TYN L+ G   NS+   S
Sbjct: 178 GLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV-NSMFIES 236

Query: 97  LDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            + + E+++ G I PD  +YN ++    + GK  +A   F+DM   ++ P   T+  ++ 
Sbjct: 237 AEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQ 296

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA-------------------- 195
                R  D  L ++  +++ G      +Y+++I GLCK                     
Sbjct: 297 ACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRA 356

Query: 196 ---------------GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
                          G +  A  + + + + G  P+A+TY+ ++    ++ +   G+E+ 
Sbjct: 357 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 416

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
              + KG   +   Y ++I    K GR+++A +  E+M   G   D   YN +I+   K 
Sbjct: 417 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 476

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK++ A  L   ME++G +   YT TILIDGL K    + A    + M   G    + ++
Sbjct: 477 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 536

Query: 361 NCIVDRLGKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
             +   L   GK+  A  + +    M +     +  M++ LCKA+R+  A KL    +  
Sbjct: 537 RALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIVDR 596

Query: 418 GVRILKSAQKAVVDGLRHSG 437
           G  I    +  +++ LR +G
Sbjct: 597 GREIPGRIRTVLINALRKAG 616



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 154/331 (46%), Gaps = 1/331 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  +CKA +L+KA     D     V PD +TY  LI A      FD   ++   M E
Sbjct: 257 NIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE 316

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     +Y+ +I G  +      +  + + M + G   +V  Y +L+    + G  +E
Sbjct: 317 RGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 376

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F+ M      P   T+++++NGLCK+   D+ + +F   +  G     + Y  LI 
Sbjct: 377 AMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLID 436

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAGR+  A  + +E+ + G A ++  Y  I+    ++ K    L +   M+ +G   
Sbjct: 437 GLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQ 496

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             + +  +I    K  + +EA  + ++M+  G+   + S+  L    C  GK+  A  +L
Sbjct: 497 TVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKIL 556

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           D++   G    +     +I+ LCKA  IK A
Sbjct: 557 DDLAPMGI-IPETAFEDMINTLCKAQRIKEA 586



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 1/291 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  +  +A A+     + G   +V  Y  LID+Y +  S +    +  RM+ 
Sbjct: 327 SLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN 386

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTY+ L+ G  ++  L   ++L D     G+  +   Y SL+  L + G+ ++
Sbjct: 387 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 446

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M        +  +N +++ L K+   D AL +F  +++ G    + T+ ILI 
Sbjct: 447 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 506

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K  +   A     ++ D G  P   ++  +        K     +IL  +   G   
Sbjct: 507 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP 566

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           +   +  +I    K  R+KEA    + +V  G ++       LIN   K G
Sbjct: 567 ET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAG 616



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 4/216 (1%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   +K +G         ++I +F  +G ++E      +M  +G+   + +YN L+N   
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 229

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
               +E+A  + + M+      D  T+ I+I G CKAG ++ A      M       +  
Sbjct: 230 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 289

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++     +   D  ++++  ME +       +YS ++  LCK ++   A  +  + 
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 349

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            + G R   +   A++D    +G   EA ++  +++
Sbjct: 350 NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 25/426 (5%)

Query: 49  IDAYCQ--FVSFDAGY-TILNRMREAGISPDVVTYNSLIAGATRN------------SLL 93
           +D++C+  FV     + T + +  E    P+V       AG  +              LL
Sbjct: 101 LDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELL 160

Query: 94  SCSLDLLD------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           + S DL+       E+ + G+     + NSL+     LG  +E   V++ M    + P  
Sbjct: 161 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSL 220

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N ++NGL  + + ++A ++F  +     VP+ VTYNI+IKG CKAG+L+ A    ++
Sbjct: 221 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 280

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +      P+ ITY T+++ C+  R +   L +   M+ +G       Y  VI    K  +
Sbjct: 281 MEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRK 340

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             EA    E M   G + ++  Y  LI+ Y K G +E A  L + M+ +GFE D  T+++
Sbjct: 341 CMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSV 400

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           L++GLCK+G +       ++    G   N   Y  ++D LGK G+I+ A N+FE M  K 
Sbjct: 401 LVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKG 460

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              DS+ Y++++  L K  ++  A  L     + G          ++DGL       EA 
Sbjct: 461 CARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAI 520

Query: 444 KIQSKI 449
           K   K+
Sbjct: 521 KFWDKM 526



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 4/357 (1%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           NSLI       L+   L +   M E GI P +++YN L++ L      + A +VF+ M  
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G + P T T+NIM+ G CK      A+  FR ++     P+ +TY  LI+         T
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              +  E+ + G      +Y+ ++    + RK      +   M +KG   +   Y  +I 
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 368

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
           ++ K G ++EA    E+M  +G + D V+Y+ L+N  CK G+L+    L D    +G   
Sbjct: 369 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 428

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +   +  LIDGL KAG I+ A    E M++ G   +   YN I+D L K GKID A+ +F
Sbjct: 429 NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALF 488

Query: 381 ESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             ME     +  +T++ ++  L K  +   A K     +  G+    ++ +A+  GL
Sbjct: 489 GRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 545



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 194/440 (44%), Gaps = 40/440 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+L      N LI ++      +    +  RM+E GI P + TYN L+ G   NS+   S
Sbjct: 180 GLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV-NSMFIES 238

Query: 97  LDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            + + E+++ G I PD  +YN ++    + GK  +A   F+DM   ++ P   T+  ++ 
Sbjct: 239 AEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQ 298

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA-------------------- 195
                R  D  L ++  +++ G      +Y+++I GLCK                     
Sbjct: 299 ACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRA 358

Query: 196 ---------------GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
                          G +  A  + + + + G  P+A+TY+ ++    ++ +   G+E+ 
Sbjct: 359 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 418

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
              + KG   +   Y ++I    K GR+++A +  E+M   G   D   YN +I+   K 
Sbjct: 419 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 478

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK++ A  L   ME++G +   YT TILIDGL K    + A    + M   G    + ++
Sbjct: 479 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 538

Query: 361 NCIVDRLGKDGKIDHAINVFE---SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
             +   L   GK+  A  + +    M +     +  M++ LCKA+R+  A KL    +  
Sbjct: 539 RALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIVDR 598

Query: 418 GVRILKSAQKAVVDGLRHSG 437
           G  I    +  +++ LR +G
Sbjct: 599 GREIPGRIRTVLINALRKAG 618



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 154/331 (46%), Gaps = 1/331 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  +CKA +L+KA     D     V PD +TY  LI A      FD   ++   M E
Sbjct: 259 NIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE 318

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     +Y+ +I G  +      +  + + M + G   +V  Y +L+    + G  +E
Sbjct: 319 RGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEE 378

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F+ M      P   T+++++NGLCK+   D+ + +F   +  G     + Y  LI 
Sbjct: 379 AMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLID 438

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAGR+  A  + +E+ + G A ++  Y  I+    ++ K    L +   M+ +G   
Sbjct: 439 GLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQ 498

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             + +  +I    K  + +EA  + ++M+  G+   + S+  L    C  GK+  A  +L
Sbjct: 499 TVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKIL 558

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           D++   G    +     +I+ LCKA  IK A
Sbjct: 559 DDLAPMGI-IPETAFEDMINTLCKAQRIKEA 588



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 1/291 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK  +  +A A+     + G   +V  Y  LID+Y +  S +    +  RM+ 
Sbjct: 329 SLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN 388

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTY+ L+ G  ++  L   ++L D     G+  +   Y SL+  L + G+ ++
Sbjct: 389 EGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIED 448

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M        +  +N +++ L K+   D AL +F  +++ G    + T+ ILI 
Sbjct: 449 AENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILID 508

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL K  +   A     ++ D G  P   ++  +        K     +IL  +   G   
Sbjct: 509 GLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP 568

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           +   +  +I    K  R+KEA    + +V  G ++       LIN   K G
Sbjct: 569 ET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAG 618



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 4/216 (1%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   +K +G         ++I +F  +G ++E      +M  +G+   + +YN L+N   
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLV 231

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
               +E+A  + + M+      D  T+ I+I G CKAG ++ A      M       +  
Sbjct: 232 NSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKI 291

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++     +   D  ++++  ME +       +YS ++  LCK ++   A  +  + 
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 351

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            + G R   +   A++D    +G   EA ++  +++
Sbjct: 352 NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387


>gi|255561941|ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538783|gb|EEF40383.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 496

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 173/367 (47%), Gaps = 7/367 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   RL  A  +I    R   +P+      LI  + +    +    IL  M  +G  PD
Sbjct: 108 LCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPD 167

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+TYN ++ G  +   L  ++DLL++M   G PPDV +YN+++ C+F     D+A R ++
Sbjct: 168 VITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWK 227

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           + +     P   T+ I++  +CK+  T  A+ +   +   G  P+LVTYN L+   CK G
Sbjct: 228 EQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQG 287

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  I+  +   G  PNAITY T++        +    EIL+ MK   +      Y 
Sbjct: 288 KYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYN 347

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE-------GKLEAAYLL 309
           T+I    K G +  A D+  QMV +    DIV+YNTL+   CKE        + E A  +
Sbjct: 348 TLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEI 407

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM K+    + Y +  +IDGLC       A   LE M       + E Y+ +++ L  
Sbjct: 408 LREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALINSLAD 467

Query: 370 DGKIDHA 376
            G ++ A
Sbjct: 468 AGMMEEA 474



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 11/319 (3%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  +A R+   M      P  +    ++ G  K    + A R+ + +   G VP+++TY
Sbjct: 112 GRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPDVITY 171

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+++ GLCK G+L++A  +L+++  SG  P+ +TY TI++C F N  +   +       R
Sbjct: 172 NMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWKEQLR 231

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G       Y  +I    K      A + +E M  +G   D+V+YN+L+N  CK+GK E 
Sbjct: 232 RGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTCKQGKYED 291

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A L++  M   G E +  T+  L+  LC  G        L  M +      +  YN +++
Sbjct: 292 AALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTYNTLIN 351

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK-------AKRLPSASKLLLSC 414
            L K G ++ AI+ F  M     + D  TY++++  LCK       + +   A ++L   
Sbjct: 352 GLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVEILREM 411

Query: 415 LKSGVRILKSAQKAVVDGL 433
            K   RI   A ++V+DGL
Sbjct: 412 GKRDHRINSYAYRSVIDGL 430



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 7/198 (3%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  + E A  III+ +  G+ P+ +TYN L+ + C    +D    IL  M+E    P V
Sbjct: 284 CKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTV 343

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ-------LGKPDE 130
           VTYN+LI G  ++ L++ ++D   +M+     PD+ +YN+L+  L +         + ++
Sbjct: 344 VTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFED 403

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M   D    +  +  +++GLC N+ TD A+++   +      P+   Y+ LI 
Sbjct: 404 AVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALIN 463

Query: 191 GLCKAGRLRTARWILKEL 208
            L  AG +  A  + ++L
Sbjct: 464 SLADAGMMEEANELRQKL 481



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 7/136 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-------FVSFDAGYT 63
           N  +   CK+  + +A       +    LPD+VTYN L+ A C+          F+    
Sbjct: 347 NTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVE 406

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           IL  M +     +   Y S+I G   N     ++ +L+ M+     PD   Y++L++ L 
Sbjct: 407 ILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALINSLA 466

Query: 124 QLGKPDEANRVFQDMI 139
             G  +EAN + Q +I
Sbjct: 467 DAGMMEEANELRQKLI 482


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 212/449 (47%), Gaps = 7/449 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R++ A  +  +   +   PDVVTY +++  YC     +    +L+ M  
Sbjct: 257 NILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  + V Y S+IA       +S ++ ++++M+  G+  D   + ++M    + G    
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M    L     T+  ++NGLC+      A R+ + ++  G   + VTY +LI 
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A  +  ++      PN +TYT +     +        E+L  M  KG   
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y ++I    K G L++A   M  M   G++ D+ +Y T+I   C+  +L+ A+ LL
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G +    T+ +L++G C +G ++G +  LE+M +     N   YN ++ +   +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
             +     +++ M     V +  TY+ ++   CKA+ +  A       ++ G R+  S+ 
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A++  L       EA+++  K+R  +++
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLT 702



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 185/371 (49%), Gaps = 7/371 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           +YN+L+ A C        + + + M      PDVVTY  ++ G    S L  ++ LL EM
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G+  +  +Y S++  L   G+  +A RV +DM+   +    A F  +++G C+    
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A   F  +QK G   + VTY  LI GLC+AG L+ A  +L+E+ D G   +A+TYT +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  K      + + M +K  T +   Y  +     K G +  A + + +M + G+
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           +L+I +YN+LIN  CK G LE A   + +M++ G + D YT+T +I  LC++  +  A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L+ M   G    +  YN +++     G+++    + E M  K    ++ TY+S++   C
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 400 KAKRLPSASKL 410
             K + S +++
Sbjct: 612 IEKNMKSTTEI 622



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 200/426 (46%), Gaps = 26/426 (6%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQF----VSFD------AGYTILNRMREAGISP 75
           A AI++  +R    P        I  Y  F    VSFD          +L R+R+ GISP
Sbjct: 166 ARAILVRALRFPS-PHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSAPLLLRLRQYGISP 224

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
              + N+++        L  ++ L  E+ E     +  SYN L+  L   G+  +A+++F
Sbjct: 225 SPESCNAVLCRLP----LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLF 276

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      P   T+ IM++G C     + A+++   +   G     V Y  +I  LC  
Sbjct: 277 DEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDE 333

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  A  +++++   G   +A  +TT+M    R             M+++G   DG  Y
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY 393

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    + G LKEA   +++M   G+ +D V+Y  LI+ YCK GK+  A+L+ ++M +
Sbjct: 394 TALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQ 453

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    +  T+T L DGLCK G++  A   L  M   G + N+  YN +++ L K G ++ 
Sbjct: 454 KRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+     M+      D +TY++++  LC++K L  A  LL   L  G++        +++
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573

Query: 432 GLRHSG 437
           G   SG
Sbjct: 574 GFCMSG 579



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 178/385 (46%), Gaps = 1/385 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C   ++  A  ++ D +  GV+ D   +  ++  +C+     A     + M++ G+
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           + D VTY +LI G  R   L  +  +L EM + G+  D  +Y  L+    ++GK  EA  
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V   M+   +TP   T+  + +GLCK      A  +   +   G    + TYN LI GLC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG L  A   + ++ ++G  P+  TYTTI+    ++++      +L  M  KG      
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  F   GR++     +E M+   +  +  +YN+L+  YC E  +++   +   M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             Q    ++ T+ ILI G CKA N+K A      M + GF     +YN ++  L K  K 
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 374 DHAINVFESMEVKDSFTYSSMVHNL 398
             A  +FE M  KD  T    V+N 
Sbjct: 687 TEARRLFEKMR-KDRLTAEPDVYNF 710



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 140/297 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++ +A  +    ++  V P+VVTY  L D  C+     A   +L+ M   G+  +
Sbjct: 435 YCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELN 494

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYNSLI G  +   L  ++  + +M E G+ PDV++Y +++  L Q  + D A+ + Q
Sbjct: 495 IFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ 554

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P   T+N+++NG C +   +   R+   + +    P   TYN L+K  C   
Sbjct: 555 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEK 614

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +++   I K +      PN  TY  ++K   + R  K  L   S M  KG+      Y 
Sbjct: 615 NMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYN 674

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +I    K  +  EA    E+M  D +  +   YN  I+L   E  LE+   L DE+
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDEL 731



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D   Q+  +  + +  SYN L+   C  G+++ A+ L DEM       D  T+ I++ G 
Sbjct: 239 DEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGY 295

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
           C    ++ A   L  M   G + N  AY  ++  L  +G++  A+ V E M     V D+
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDA 355

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +++++   C+   L +A        K G+        A+++GL  +G  +EA+++
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  FC + R+E  + ++   +   + P+  TYN L+  YC   +  +   I   M  
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN LI G  +   +  +L    EM+E G      SYN+L+  L +  K  E
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 131 ANRVFQDMICGDLTPCTATFNIMLN 155
           A R+F+ M    LT     +N  ++
Sbjct: 689 ARRLFEKMRKDRLTAEPDVYNFYID 713


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 213/463 (46%), Gaps = 45/463 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKANRL++A  +     +   +P    YN +I  Y     FD  Y++L R R  G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V+ YN ++    +   +  +L + +EM +    P++ +YN L+  L + GK D A  
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M    L P   T NIM++ LCK++  D A  MF  +      P+ +T+  LI GL 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK---------------------------- 225
           K GR+  A  + +++ DS    N+I YT+++K                            
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 226 -------CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                  C F+  + + G  +   +K + +  D   Y  +I   +K G   E  +    M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G  LD  +YN +I+ +CK GK+  AY LL+EM+ +GFE    T+  +IDGL K   +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E       + N+  Y+ ++D  GK G+ID A  + E +  K    + +T++S+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +  L KA+ +  A    L C +S ++ LK     V  G+  +G
Sbjct: 699 LDALVKAEEINEA----LVCFQS-MKELKCTPNQVTYGILING 736



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 203/436 (46%), Gaps = 39/436 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+A +L+ A  +     + G+ P+V T N+++D  C+    D    +   M  
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +PD +T+ SLI G  +   +  +  + ++ML+     +   Y SL+   F  G+ ++
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            +++++DMI  + +P     N  ++ + K    +    MF  ++   FVP+  +Y+ILI 
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG                               F N  Y    E+  +MK +G   
Sbjct: 561 GLIKAG-------------------------------FANETY----ELFYSMKEQGCVL 585

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  VI  F K G++ +A   +E+M T G +  +V+Y ++I+   K  +L+ AY+L 
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E + +  E +   ++ LIDG  K G I  A L LE + + G   NL  +N ++D L K 
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +I+ A+  F+SM+      +  TY  +++ LCK ++   A        K G++    + 
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765

Query: 427 KAVVDGLRHSGCRREA 442
             ++ GL  +G   EA
Sbjct: 766 TTMISGLAKAGNIAEA 781



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 172/396 (43%), Gaps = 40/396 (10%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KAN+L +   ++    +    P    Y  LI A+      D   T+  +M+E G  P V 
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            + +LI G  +   +  +L LLDEM    +  D+  YN  +    ++GK D A + F ++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               L P   T+  M+  LCK    D A+ MF  L+K+  VP    YN +I G   AG+ 
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +L+     G  P+ I Y  I+ C                                
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTC-------------------------------- 352

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
                K+G++ EA    E+M  D    ++ +YN LI++ C+ GKL+ A+ L D M+K G 
Sbjct: 353 ---LRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +  T  I++D LCK+  +  A    E M+      +   +  ++D LGK G++D A  
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468

Query: 379 VFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 410
           V+E M   D    S  Y+S++ N     R     K+
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 182/406 (44%), Gaps = 5/406 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           +YN L+    +  +FDA   IL  M  AG  P V T   ++ G  + + L    D++  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
            +    P   +Y +L+     +   D    +FQ M      P    F  ++ G  K    
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+AL +   ++      ++V YN+ I    K G++  A     E+  +G  P+ +TYT++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  +    +E+   +++       + Y T+I  +   G+  EA   +E+    G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              +++YN ++    K GK++ A  + +EM+K     +  T+ ILID LC+AG +  A  
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFE 398

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
             + M K G   N+   N +VDRL K  K+D A  +FE M+ K    D  T+ S++  L 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K  R+  A K+    L S  R       +++    + G + +  KI
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 121/243 (49%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TR  NI +  FCK  ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +   I  +VV Y+SLI G  +   +  +  +L+E+++ G+ P+++++NSL+  L +
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M     TP   T+ I++NGLCK R  + A   ++ +QK G  P  ++
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I GL KAG +  A  +      +G  P++  Y  +++      +      +    +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824

Query: 245 RKG 247
           R+G
Sbjct: 825 RRG 827



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 150/360 (41%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F    R E    I  D I     PD+   N  +D   +    + G  +   ++     PD
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             +Y+ LI G  +    + + +L   M E G   D  +YN ++    + GK ++A ++ +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+  +++GL K    D A  +F   +       +V Y+ LI G  K G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A  IL+EL   G  PN  T+ +++    +  +    L    +MK    T +   Y 
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K+ +  +A  + ++M   G++   +SY T+I+   K G +  A  L D  +  
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D   +  +I+GL        A    E   + G   + +    ++D L K+  ++ A
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 40/317 (12%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           +L  C  ++N +L  + + R  D   ++   +   GF P + T   ++ G  KA +LR  
Sbjct: 93  ELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREG 152

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +++ +      P    YTT++          + L +   M+  GY      + T+I  
Sbjct: 153 YDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F K GR+  A   +++M +  +  DIV YN  I+ + K GK++ A+    E+E  G + D
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNK--------------IGFDS------------ 355
           + T+T +I  LCKA  +  A    E++ K              +G+ S            
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332

Query: 356 ---------NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 402
                    ++ AYNCI+  L K GK+D A+ VFE M+ KD+     TY+ ++  LC+A 
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAG 391

Query: 403 RLPSASKLLLSCLKSGV 419
           +L +A +L  S  K+G+
Sbjct: 392 KLDTAFELRDSMQKAGL 408



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  R+++A  I+ + ++ G+ P++ T+N L+DA  +    +        M+E   +P+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY  LI G  +    + +     EM + G+ P   SY +++  L + G   EA  +F 
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                   P +A +N M+ GL       +A  +F   ++ G      T  +L+  L K  
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846

Query: 197 RLRTAR---WILKELGDSGHA 214
            L  A     +L+E G + HA
Sbjct: 847 CLEQAAIVGAVLRETGKARHA 867



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/98 (21%), Positives = 41/98 (41%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   CK  +  KA     +  + G+ P  ++Y  +I    +  +      + +R +  
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
           G  PD   YN++I G +  +    +  L +E    G+P
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 185/392 (47%), Gaps = 28/392 (7%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT------------------YNS 82
           D   +  LI     FVSF      + R  E    PDV                    Y S
Sbjct: 96  DTFCHMFLIKLSPSFVSF------ILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVS 149

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI     N +L     +  +  EMG+   V+S NSL+     LG  +E   V++ M    
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENG 209

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P   ++N ++NGL  +++ ++A R+F  ++     P++VTYN +IKG C+ G+ R A 
Sbjct: 210 IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAF 269

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
             LK +     AP+ ITY T+++ C+    +   L +   M  KG       Y  VI   
Sbjct: 270 EKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGL 329

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K G+  E     E M++ G + ++  Y  LI+   K G +  A LL   M+K+G E D+
Sbjct: 330 CKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDE 389

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+ ++++ LCK+G +  A  ++E+ +  G   N   Y+ ++D LGK G++D A  +F  
Sbjct: 390 VTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYE 449

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
           M  K    DS+ Y++++  L K  ++  A  L
Sbjct: 450 MVKKGCPPDSYCYNALIDALAKCGKIDEALAL 481



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 195/447 (43%), Gaps = 47/447 (10%)

Query: 11  NICVCTFCKANRLEKAEAI--IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           N  V     +  +E AE +  +++  ++G  PDVVTYN +I  YC+       +  L  M
Sbjct: 218 NFLVNGLVNSKFIESAERVFEVMENGKIG--PDVVTYNTMIKGYCEVGKTRKAFEKLKAM 275

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLG 126
               ++PD +TY +LI            L L  EM E G  IPP V  Y+ ++  L + G
Sbjct: 276 ELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHV--YSLVIGGLCKDG 333

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  E   VF++MI        A +  +++   K      A+ +F+ ++K G  P+ VTY 
Sbjct: 334 KRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYG 393

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +++  LCK+GRL  A   ++     G A NA+ Y++++                      
Sbjct: 394 VIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLI---------------------- 431

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               DG G         K GR+ EA     +MV  G   D   YN LI+   K GK++ A
Sbjct: 432 ----DGLG---------KSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEA 478

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             L   ME  G +   YT+TILI GL +    + A    + M   G      A+  +   
Sbjct: 479 LALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTG 538

Query: 367 LGKDGKIDHAINVFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
           L   GK+  A  + + M    V     +  M++ LCKA R+  A KL    +  G  I  
Sbjct: 539 LCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKAGRIKEACKLADGIVDRGREIPG 598

Query: 424 SAQKAVVDGLRHSGCRREAKKI-QSKI 449
             +  +++ LR +G    A K+ +SKI
Sbjct: 599 RVRTVLINALRKAGNADLALKLMRSKI 625



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 199/431 (46%), Gaps = 5/431 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L+  +++      +G++  V + N LI ++      +    +  RM+E GI P + +YN 
Sbjct: 160 LDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNF 219

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           L+ G   +  +  +  + + M    I PDV +YN+++    ++GK  +A    + M   +
Sbjct: 220 LVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRN 279

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P   T+  ++         D+ L ++  + + G       Y+++I GLCK G+     
Sbjct: 280 VAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGY 339

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            + + +   G   N   YT ++    +       + +   MK++G   D   Y  ++ + 
Sbjct: 340 TVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSL 399

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K GRL EA +YME     GV ++ + Y++LI+   K G+++ A  +  EM K+G   D 
Sbjct: 400 CKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDS 459

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           Y +  LID L K G I  A    + M   G D  +  Y  ++  L ++ + + A+ +++ 
Sbjct: 460 YCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDL 519

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           M  K     +  + ++   LC + ++  A K+L      GV I ++A   +++ L  +G 
Sbjct: 520 MIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGV-IPETAFDDMINILCKAGR 578

Query: 439 RREAKKIQSKI 449
            +EA K+   I
Sbjct: 579 IKEACKLADGI 589



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 154/354 (43%), Gaps = 42/354 (11%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           ++   + ++ +   CK  +  +   +  + I  G   +V  Y  LID+  +  +      
Sbjct: 316 EIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAML 375

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  RM++ G+ PD VTY  ++    ++  L  +L+ ++     G+  +   Y+SL+  L 
Sbjct: 376 LFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLG 435

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ DEA R+F +M+     P +  +N +++ L K    D AL + + ++  G    + 
Sbjct: 436 KSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVY 495

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY ILI GL +  R   A  +   + D G  P A  +  +                    
Sbjct: 496 TYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRAL-------------------- 535

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                     G C         G++  A   +++M   GV +   +++ +IN+ CK G++
Sbjct: 536 --------STGLCLS-------GKVARACKILDEMAPMGV-IPETAFDDMINILCKAGRI 579

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK---IGFD 354
           + A  L D +  +G E      T+LI+ L KAGN   A L L+ M     IG+D
Sbjct: 580 KEACKLADGIVDRGREIPGRVRTVLINALRKAGN---ADLALKLMRSKIGIGYD 630



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 4/205 (1%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A K+K YT +   Y ++I      G L        +    G+ + + S N+LI  +   G
Sbjct: 134 AGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLG 193

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            +E    +   M++ G E   +++  L++GL  +  I+ A    E M       ++  YN
Sbjct: 194 MVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYN 253

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++    + GK   A    ++ME++    D  TY +++          S   L     + 
Sbjct: 254 TMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEK 313

Query: 418 GVRILKSAQKAVVDGLRHSGCRREA 442
           G+ I       V+ GL   G R E 
Sbjct: 314 GLEIPPHVYSLVIGGLCKDGKRVEG 338


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 23/406 (5%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            +RM E    P    YN+++     + ++  +L L + M+  G  P+  +YN LM  L +
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   +A ++F +M+   + P    + ++L+ LC     D A+++   ++  G +P+ VT
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN  + GLCK GR+  A   L  L D G A     Y+ ++   F+ R++  G      M 
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +  + D   Y  +I    + GR+++A  +++ M   G   D   YNT++ + C  G LE
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L  EM +     D  T TI+I GLCK G +  A    + M + G D  +  YN ++
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459

Query: 365 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 407
           D   ++G+++ A  +F  ME                 V DS +   +VH++C++ ++  A
Sbjct: 460 DGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKA 519

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            KLL S + SGV         +++GL    C+  A+ +   +R+ K
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGL----CK--ARNLDGAVRLFK 559



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 191/412 (46%), Gaps = 19/412 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    YN ++ A            + NRM  AG +P+  TYN L+ G  +  +   +L +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEML+ GI P+V  Y  L+  L   GK DEA ++   M      P   T+N  L+GLCK
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               + A +    LQ  GF   L  Y+ LI GL +A R        K + +   +P+ + 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT +++ C    + +  L  L  MK+KG+  D F Y TV+      G L+ A     +M+
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            + + LD  +   +I   CK G ++ A  + DEM + G +    T+  LIDG  + G ++
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 340 GARLHLEYMNKIGFDSNL--------------EAYNCIVDRLGKDGKIDHAI----NVFE 381
            AR+    M ++G + +L              E+   +V  + + G++  A     ++ +
Sbjct: 470 EARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           S  V D  TY+++++ LCKA+ L  A +L       G+   +     ++DGL
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 183/412 (44%), Gaps = 61/412 (14%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNM------------------ 47
           + ++  + + + C A ++++A  ++      G LPD VTYN                   
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300

Query: 48  -----------------LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN 90
                            LID   Q   FD G+     M E  ISPDVV Y  +I G    
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  +L  LD M + G  PD + YN+++  L   G  + A+ +  +M+  +L   + T 
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
            IM+ GLCK    D A+++F  + +HG  P ++TYN LI G  + GRL  AR +  ++ +
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-E 479

Query: 211 SGHAPNAITYTTI--MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            G+ P+     T+   + C      KL                       +    + G++
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKL-----------------------VHDMCQSGQV 516

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +A   +  ++  GV  D+V+YNTLIN  CK   L+ A  L  E++ +G   D+ T+  L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           IDGL +A     A +  + + + G   +L  YN ++  L +  K+  AIN++
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 195/432 (45%), Gaps = 23/432 (5%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+  TYN+L+D  C+         + + M + GI P+V  Y  L++       +  +
Sbjct: 202 GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEA 261

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LL  M + G  PD  +YN+ +  L ++G+ +EA +    +  G        ++ +++G
Sbjct: 262 VQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDG 321

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L + R  D     ++ + +    P++V Y I+I+G  +AGR+  A   L  +   G  P+
Sbjct: 322 LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD 381

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y T++K    +   +    + S M +     D      +I    K G + EA    +
Sbjct: 382 TFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE-------------CDKY 323
           +M   G    +++YN LI+ + +EG+LE A +L  +ME                  CD  
Sbjct: 442 EMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSE 501

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           +   L+  +C++G +  A   L  +   G   ++  YN +++ L K   +D A+ +F+ +
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           ++K    D  TY +++  L +A R   A  L  + L+SG     S   ++ + +  S CR
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG----SSPSLSIYNSMMRSLCR 617

Query: 440 REAKKIQSKIRM 451
              KK+   I +
Sbjct: 618 --MKKLSQAINL 627



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 203/460 (44%), Gaps = 25/460 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK      A  +  + +  G++P+V  Y +L+ + C     D    +L  M++
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN+ ++G  +   ++ +   L  + + G    +  Y+ L+  LFQ  + DE
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               ++ M+  +++P    + IM+ G  +    ++AL     ++K GFVP+   YN ++K
Sbjct: 331 GFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLK 390

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK-YKLGLEILSAMKRKGYT 249
            LC  G L  A  +  E+  +    ++ T  TIM C    R      ++I   M   G  
Sbjct: 391 VLCDHGDLERAHTLRSEMLQNNLVLDSTT-QTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQM-----------VTDGVQL--DIVSYNTLINL 296
                Y  +I  F + GRL+EA     +M           +T G     D  S   L++ 
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHD 509

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            C+ G++  AY LL  +   G   D  T+  LI+GLCKA N+ GA    + +   G   +
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569

Query: 357 LEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              Y  ++D L +  + + A+    N+ +S        Y+SM+ +LC+ K+L  A  L L
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629

Query: 413 SCLKSGV------RILKSAQKAVVDGLRHSGCRREAKKIQ 446
             L           +L +A K + DG    G R   K  Q
Sbjct: 630 DYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQ 669



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 174/380 (45%), Gaps = 22/380 (5%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A R+E A + +    + G +PD   YN ++   C     +  +T+ + M +  +  D  
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T   +I G  +  L+  ++ + DEM E G  P V +YN+L+   ++ G+ +EA  +F  M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 139 ICGDLTPC--------------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             G+  P               + +   +++ +C++     A ++ R +   G VP++VT
Sbjct: 479 EMGN-NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI GLCKA  L  A  + KEL   G +P+ ITY T++    R  +    + +   + 
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEAT----DYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + G +     Y +++ +  ++ +L +A     DY+ +     V+ ++++     +   ++
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN---AHKEIED 654

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G L+     L +++++        +TI + GLC+      A      + + G D      
Sbjct: 655 GSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 361 NCIVDRLGKDGKIDHAINVF 380
             +++ L  D  ++ A+++ 
Sbjct: 715 ALLINYLCWDRNLNAAVDIM 734


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 5/346 (1%)

Query: 16  TFCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           + CKA ++ +A AI    +     +PDVV+Y++LID +C+         +  +M +    
Sbjct: 455 SLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 514

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+V TYN+ + G  R   ++ +  + +EM+  G  PDV +Y++L+H      K D+A+ +
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+ MI     P   T+N +L+GLCK    D A  +FR + + G  P+ VTY  L+ G C 
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G++  A  +  E+   GH P+ + Y  ++K  FR  K     ++   M  +    D   
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +  +I    K  RL +A +  E+M  D G   D+V+YN+LI   C E +L  A  +  E+
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           ++     D +   +L++ + K G +   +  + + +   F+  +EA
Sbjct: 755 DRLKLSPDPHAFNVLLEAI-KCGIV--YQFEIRFKDPPAFNVLMEA 797



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 22/408 (5%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           ++ R++KAE   ++     + P   T + +I   C+    D+  ++L  M + G  PD+ 
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMA 410

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEM--GIPPDVWS-------YNSLMHCLFQLGKPD 129
           T++ LI     N L  C  D + E  E   G+   + S       YNSL++ L +  K  
Sbjct: 411 THSMLI-----NEL--CKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVH 463

Query: 130 EANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +A  +F  M+      P   +++I+++G CK      A ++++ +     VP + TYN  
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 523

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + GL + GR+  A+ + +E+  +G +P+ ITY+T++      RK+    E+   M  +G 
Sbjct: 524 LNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC 583

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y  ++    K  +  EA +   +MV  G   D V+Y TL+  +C  GK+E A  
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVE 643

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           + DEM  +G + D   +  L+ G  +AG    A+   + M       +  ++N ++D L 
Sbjct: 644 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLS 703

Query: 369 KDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           K  ++D A+ VFE ME       D  TY+S++  LC  +RL  A K+ 
Sbjct: 704 KAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 751



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 178/390 (45%), Gaps = 39/390 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-------- 68
            CKA R++ A +++   I+ G  PD+ T++MLI+  C+          L  M        
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRS 443

Query: 69  ------------------------------REAGISPDVVTYNSLIAGATRNSLLSCSLD 98
                                          E    PDVV+Y+ LI G  +   L  +  
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L  +M+++   P+V +YN+ ++ L + G+  +A  V+++M+    +P   T++ +++G  
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFS 563

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
             R  D A  +F  +   G  P  VTYN L+ GLCK  +   A  + +++ + G  P+ +
Sbjct: 564 LARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TYTT++       K +  +E+   M  KG+  D   Y  ++  F + G+  EA    + M
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDKYTHTILIDGLCKAGN 337
           V+   + D VS+N +I+   K  +L+ A  + + ME+  G   D  T+  LI GLC    
Sbjct: 684 VSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 743

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +  A    + ++++    +  A+N +++ +
Sbjct: 744 LSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 190/420 (45%), Gaps = 9/420 (2%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLIAGATRNSL 92
           ++ G  PD   Y+ ++ A+C+  + D  + +   M     +P + V + + ++G  ++  
Sbjct: 261 VKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGK 320

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  + +    M E  +      Y+ L+  L + G+ D+A     ++   ++ P + T + 
Sbjct: 321 IEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHS 379

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS- 211
           ++  LCK    D+AL +   + K G+ P++ T+++LI  LCKA +++ A+  L+ +    
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439

Query: 212 -GHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYCTVIAAFVKIGRLK 269
              + +  +Y +++    + +K      I S M   + +  D   Y  +I  F KI  L 
Sbjct: 440 SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELG 499

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A    +QM+      ++ +YN  +N   ++G++  A  + +EM   G   D  T++ LI
Sbjct: 500 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLI 559

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
            G   A     A    E M   G   N   YNC++  L K+ K D A  +F  M  +   
Sbjct: 560 HGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 619

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY+++++  C   ++  A ++    +  G      A   ++ G   +G   EAK++
Sbjct: 620 PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQL 679



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 172/382 (45%), Gaps = 17/382 (4%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV TYN L+D   +         +  +M   G+ P+  TY  L+  +        ++   
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM++ G  P    Y  +  CL   GK  E +RVF      DL    A   ++   L  N
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGR----DLEKRVAVEMMLKKALLVN 243

Query: 161 RYTDN----ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP- 215
               +    A ++FR + K G  P+   Y+ ++   CK   L  A  +  E+     AP 
Sbjct: 244 FVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPL 303

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + +T  +    ++ K +   E    M+    +     Y  +I   ++ GR+ +A +  
Sbjct: 304 NNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEAC 362

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            ++    +Q    + +++I   CK G++++A  LL+ M K+G+  D  TH++LI+ LCKA
Sbjct: 363 LEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKA 422

Query: 336 GNIKGARLHLEYMNK--IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---- 389
             I+ A+  L+ M++      S+  +YN +++ L K  K+  A  +F +M  + SF    
Sbjct: 423 DKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDV 482

Query: 390 -TYSSMVHNLCKAKRLPSASKL 410
            +YS ++   CK   L  A KL
Sbjct: 483 VSYSILIDGFCKIDELGRAEKL 504



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 188/444 (42%), Gaps = 50/444 (11%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L++A  +    +  GV+P+  TY +L+ + C   + D        M + G  P    Y  
Sbjct: 145 LKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQK 204

Query: 83  ------------------------------------LIAGATRNSLLSCSLDLLDEMLEM 106
                                               L+    ++  +  S  L   M++ 
Sbjct: 205 VTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS-KLFRAMVKS 263

Query: 107 GIPPD--VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT-ATFNIMLNGLCKNRYT 163
           G  PD  ++SY  L HC  +L   DEA ++F +M      P     +   L+GLCK+   
Sbjct: 264 GCKPDATIYSYMVLAHC--KLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKI 321

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A    R +Q+     + V Y++LI+ L ++GR+  A     E+      P++ T  ++
Sbjct: 322 EQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV 380

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM--VTD 281
           ++   +  +    L +L  M ++GY  D   +  +I    K  +++EA ++++ M     
Sbjct: 381 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKIS 440

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKG 340
                  SYN+L+N  CK  K+  A+ +   M  ++ F  D  +++ILIDG CK   +  
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 396
           A    + M  +    N+  YN  ++ L + G+I  A  V+E M       D  TYS+++H
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560

Query: 397 NLCKAKRLPSASKLLLSCLKSGVR 420
               A++   A +L  + +  G R
Sbjct: 561 GFSLARKHDQAHELFETMISRGCR 584



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 44/315 (13%)

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           + C  T   ++  L   R    AL  FR LQ   F  ++ TYN L+  L +   L+ A  
Sbjct: 94  SSCRETVGAVIKHL---RDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQ 150

Query: 204 ILKELGDSGHAPNAITYTTIMK--CCFRNRK--------------------YKLGLEILS 241
           + +++   G  PN  TY  +++  C  RN                      Y+   E L 
Sbjct: 151 VFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLK 210

Query: 242 AMKRKGYTFDGFGY-------------CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           A  ++G     FG                ++  FV   +  EA+     MV  G + D  
Sbjct: 211 ATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDAT 270

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            Y+ ++  +CK   L+ A+ L  EM  +     +    T  + GLCK+G I+ A      
Sbjct: 271 IYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRT 330

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKR 403
           M +    S+   Y+ ++  L + G+ID A      +  ++    S T  S++  LCKA R
Sbjct: 331 MQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGR 389

Query: 404 LPSASKLLLSCLKSG 418
           + SA  LL + +K G
Sbjct: 390 VDSALSLLETMIKRG 404


>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
 gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 218/444 (49%), Gaps = 9/444 (2%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T+L+N  V    +  + ++AE+I    I  G  P +++Y  L+ A      FD+ Y+I++
Sbjct: 17  TKLMNFLV----EKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIIS 72

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           ++ E G++PD + +N++I   + +  +  +++   +M E G+ P   +YN+L+      G
Sbjct: 73  QVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAG 132

Query: 127 KPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           KP+E+ ++ + M   G++ P   T+N+++   C  +    A  +   +   G  P++VTY
Sbjct: 133 KPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTY 192

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +     + G L  A  ++ E+ ++G  PN  T   IM    +  + +  L     MK 
Sbjct: 193 NTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKE 252

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   +   + ++I  FV I       + +  M   GV+ D+++++T++N +   G +E 
Sbjct: 253 LGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEK 312

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
              + D+M K G E D + ++IL  G  +A   + A   L  M K GF  N+  +  ++ 
Sbjct: 313 CREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVIS 372

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
                GK+D+A+ VF+ M  +    +  T+ +++    +A++   A ++L    +  V+ 
Sbjct: 373 GWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQP 432

Query: 422 LKSAQKAVVDGLRHSGCRREAKKI 445
            KS    V +  R +G  +EA ++
Sbjct: 433 EKSTMLLVAEAWRATGMTKEANRL 456



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 35/303 (11%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD---- 59
           K + R  N+ V  +C   R+ +A  ++   I  G+ PDVVTYN +  AY Q  + D    
Sbjct: 151 KPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEG 210

Query: 60  ---------------------AGYTILNRMREA----------GISPDVVTYNSLIAGAT 88
                                +GY    R+REA          GI P++V +NSLI G  
Sbjct: 211 VILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFV 270

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
                    ++L+ M E G+ PDV +++++M+     G  ++   +F DM+   + P   
Sbjct: 271 AIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAH 330

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            ++I+  G  + +  + A  +   + K GF P +V +  +I G C AG++  A  +  ++
Sbjct: 331 AYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKM 390

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G +PN  T+ T++      R+     EIL  M       +      V  A+   G  
Sbjct: 391 CQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMT 450

Query: 269 KEA 271
           KEA
Sbjct: 451 KEA 453



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 38/267 (14%)

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+  L + G+ + A  I   L + GH P+ I+YTT++      +++     I+S ++  G
Sbjct: 19  LMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENG 78

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   +  VI AF + G ++ A +   +M  +G++    +YNTLI  Y   GK E + 
Sbjct: 79  MNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESV 138

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            LL+ M ++G                   N+K                NL  YN +V   
Sbjct: 139 KLLELMSQEG-------------------NVK---------------PNLRTYNVLVRAW 164

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
               +I  A NV   M       D  TY+++     +   L  A  ++L    +GV+  +
Sbjct: 165 CNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNE 224

Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIR 450
                ++ G    G  REA +   +++
Sbjct: 225 RTCGIIMSGYCKEGRIREALRFAYRMK 251


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 4/355 (1%)

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E   PPD +SYN ++  L++ GK  +A +VF +M+   + P   T+N M++G  K    +
Sbjct: 9   EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
              R+   +   G  P +VTYN+L+ GLC+AGR+   R ++ E+      P+  TY+ + 
Sbjct: 69  AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               R  + +  L + +   +KG     +    ++    K G++ +A   +E +V  G+ 
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
              V YNTLIN YC+   L  A+ + ++M+ +    D  T+  LI+GLCK   +  A   
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 248

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           +  M K G D ++E +N ++D  G  G+++    V   M+ K    D  ++ S+V   CK
Sbjct: 249 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 308

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             ++P A  +L   +   V        +++D    SG   +A  +  K++ + +S
Sbjct: 309 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363



 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 219/482 (45%), Gaps = 41/482 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +    ++ +   A  +  + + +GV+P+ +TYN +ID + +    +AG+ + ++M  
Sbjct: 20  NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLH 79

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P++VTYN L++G  R   +  +  L+DEM    + PD ++Y+ L   L + G+   
Sbjct: 80  DGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRT 139

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV------- 183
              +F + +   +     T +I+LNGLCK+     A ++   L   G VP  V       
Sbjct: 140 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN 199

Query: 184 ----------------------------TYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                       TYN LI GLCK   +  A  ++ E+  SG  P
Sbjct: 200 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 259

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  T+ T++       + +    +LS M++KG   D   + +V+ AF K G++ EA   +
Sbjct: 260 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 319

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M+   V  +   YN++I+ Y + G  E A+LL+++M+  G      T+ +L+ GLC++
Sbjct: 320 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 379

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TY 391
             I  A   +  +   G   ++ +YN I+      G  D A+ + + M    ++ +  TY
Sbjct: 380 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTY 439

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
            ++V  L  A R+     L    L   V    S    +VD   +  C  ++K    K  M
Sbjct: 440 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA--YVRCENDSKVASLKKEM 497

Query: 452 AK 453
           ++
Sbjct: 498 SE 499



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 186/385 (48%), Gaps = 4/385 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD  +YN++I    +         + + M + G+ P+ +TYN++I G  +   L     L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            D+ML  G  P++ +YN L+  L + G+ DE   +  +M    + P   T++I+ +GL +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              +   L +F    K G +    T +IL+ GLCK G++  A  +L+ L  +G  P  + 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y T++    + R  +    I   MK +    D   Y  +I    K+  + +A D + +M 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV   + ++NTLI+ Y   G+LE  + +L +M+++G + D  +   ++   CK G I 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSF-TYSSMV 395
            A   L+ M       N + YN I+D   + G  + A  + E M+   V  S  TY+ ++
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVR 420
             LC++ ++  A +L+ +    G+R
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLR 398



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 35/346 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +   CK  ++ KAE ++   +  G++P  V YN LI+ YCQ       + I  +M+ 
Sbjct: 160 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 219

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM----------H 120
             I PD +TYN+LI G  +  +++ + DL+ EM + G+ P V ++N+L+           
Sbjct: 220 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 279

Query: 121 CLFQL-------------------------GKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           C   L                         GK  EA  +  DMI  D+ P    +N +++
Sbjct: 280 CFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 339

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
              ++  T+ A  +   ++  G    +VTYN+L+KGLC++ ++  A  ++  L + G  P
Sbjct: 340 AYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRP 399

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + ++Y TI+  C         LE+L  M + G       Y T+++A    GR+ +     
Sbjct: 400 DVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 459

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           +QM+   V+     Y  +++ Y +         L  EM ++G   D
Sbjct: 460 QQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 11/414 (2%)

Query: 12  ICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I +   CK   +E A    + +   GI++ V P    YN LI+ YC+  S D    +L+ 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSG 433

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G++P   +Y+ LIAG  RN  LS +++L  EM E GI  + +++ +L++   +  K
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA R+F  MI  ++ P   TFN+M+ G C       A +++  + + G  P+  TY  
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLC    +  A   + +L +S    N  + T ++   FR  ++     +   M  +G
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRG 613

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   +  ++ A +K    +++     +M   GV+ D + Y  +I+   KE  +  A 
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
              D+M   G+  +  THT+LI+ LCK+G +  A L  + M       N   YNC +D  
Sbjct: 674 NCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733

Query: 368 GKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +G ++ A ++  +M    +    +++ ++  LCKA ++  A  L+    +SG
Sbjct: 734 ATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG 787



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 188/384 (48%), Gaps = 2/384 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N+ +   CK  R+++A  +    + +GV  D VTY  L+  +C+    +    
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I + M   G  P     + +I    +  L+  +  L  ++ ++G+ P+V++YN+L+  L 
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+A+R+F++M    L P   T+ I+++ LCK    ++AL +F  ++  G    + 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN LI G CK G L  AR +L  +   G  P A +Y+ ++    RN      +E+   M
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G  ++ + +  +I  F K  ++ EA    ++M+   V  + V++N +I  YC  G +
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
             A+ L D+M + G + D YT+  LI GLC  +G  K      +  N     +N  +   
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF-SLTA 588

Query: 363 IVDRLGKDGKIDHAINVFESMEVK 386
           ++  L ++G+     ++++ M V+
Sbjct: 589 LLYGLFREGRFTETYHLWDEMAVR 612



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 195/418 (46%), Gaps = 4/418 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG++P+V  YN LID  C+   FD    +   M   G+ P+ VTY  LI    +  ++  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M + GI   V+ YNSL++   + G  D A  +   M+   LTP  A+++ ++ 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+N    +A+ + R + + G      T+  LI G CK  ++  A  +  ++ DS   P
Sbjct: 452 GLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T+  +++        +   ++   M   G   D + Y ++I+       + +A +++
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             +      L+  S   L+    +EG+    Y L DEM  +G + D  + TI++    K 
Sbjct: 572 ADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
            + + + +    M + G   +   Y C++D L K+  +  A+N ++ M +     ++ T+
Sbjct: 632 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTH 691

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +++NLCK+  L SA  L    L   V   K      +D     G   +AK + S +
Sbjct: 692 TVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 189/415 (45%), Gaps = 18/415 (4%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ GV  D   Y   I AYC+  + D    ++ RM   G+    V YN L+ G  +N  +
Sbjct: 190 LQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRV 249

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++++ + M+ +G+  D  +Y +L++   ++ + + A R+  DMI     P  A  + M
Sbjct: 250 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 309

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ L K    + A  +   L   G VP +  YN LI  LCK  R   A  + KE+   G 
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY  ++    +    +  L +   M+ KG     + Y ++I  + K G L  A  
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  MV +G+     SY+ LI   C+ G L +A  L  EM ++G   + YT T LI+G C
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFC 489

Query: 334 KAGNIKGARLHLEYM-------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 385
           K   +  A    + M       N++ F+  +E Y C+V      G I  A  +++ M   
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEM 542

Query: 386 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
               D++TY S++  LC    +  A++ +     S   +   +  A++ GL   G
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREG 597



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 173/403 (42%), Gaps = 41/403 (10%)

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI+ +  T + ++    +    + + DL D+ML+ G+  D + Y + +    +    D 
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      +N+++ GLCKN     A+ +   +   G   + VTY  L+ 
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 191 GLCKAGRLRTARWILKE-----------------------------------LGDSGHAP 215
           G C+   L  A  I  +                                   LGD G  P
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y  ++    +N ++     +   M  +G   +   Y  +I A  K G +++A    
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   G+++ +  YN+LIN YCK+G L+ A  LL  M K+G      +++ LI GLC+ 
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 336 GNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
           G++  A  LH E M + G   N   +  +++   KD K+D A  +F+ M     + +  T
Sbjct: 457 GDLSSAMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           ++ M+   C    +  A +L    ++ G++      ++++ GL
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/385 (21%), Positives = 163/385 (42%), Gaps = 69/385 (17%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  ++++A  +    I   V+P+ VT+N++I+ YC   +    + + ++M E G+ PD
Sbjct: 488 FCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 547

Query: 77  VVTYNSLIAGAT-----------------------------------RNSLLSCSLDLLD 101
             TY SLI+G                                     R    + +  L D
Sbjct: 548 NYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWD 607

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM   G+  D+ S+  +++   +    +++  +F++M    + P    +  M++ L K  
Sbjct: 608 EMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEE 667

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------- 208
               AL  +  +   G+ P  VT+ +LI  LCK+G L +A  + KE+             
Sbjct: 668 NMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727

Query: 209 ---------GD------------SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
                    GD             GH  + +++  ++K   +  K +  ++++  +   G
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG 787

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           ++ D   Y T+I    K+G + +A +   +M+  G++ D+V+YN  I      G+ + A 
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 308 LLLDEMEKQGFECDKYTHTILIDGL 332
            +   M + G + +  T+  L+ G+
Sbjct: 848 GIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 1/244 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL      I V    K +  EK+  +  +    GV PD + Y  +IDA  +  +      
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             ++M   G SP+ VT+  LI    ++  L  +  L  EML   + P+ ++YN  +    
Sbjct: 675 CWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  ++A  +   M+ G L     +FNI++ GLCK      A+ + R + + GF P+ +
Sbjct: 735 TEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCI 793

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +Y+ +I  LCK G +  A  +  E+   G  P+ + Y   ++ C  + +    L I + M
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 244 KRKG 247
            R G
Sbjct: 854 IRSG 857



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +   CK+  L  AE +  + +   VLP+  TYN  +D +      +    + + M + 
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            ++  +V++N LI G  +   +  ++DL+ ++ E G  PD  SY++++H L ++G  ++A
Sbjct: 753 HLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKA 811

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ +M+   L P    +NI +     +  +D AL ++  + + G  P   TY  L+ G
Sbjct: 812 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871

Query: 192 L---------CKAGRLRTARWILKELGDSGH 213
           +         C  G  +  +  + EL DS H
Sbjct: 872 ISLMLHYDFSCFRGTKQYIQISVYELMDSTH 902



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG   N  T + I+    + R++ L  ++   M + G   D + Y   I A+ +   L  
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + +M ++GV+   V YN L+   CK  +++ A  + + M   G   D+ T+  L+ 
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 331 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 355
           G C+   ++ A      M ++GF                                     
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+ AYN ++D+L K+ + D A  +F+ M  +    +  TY+ ++H LCK   +  A  L 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
                 G+++      ++++G    G    A+ + S
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CKA ++++A  ++      G  PD ++Y+ +I   C+    +  + + N M 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
             G+ PDVV YN  I     +     +L +   M+  G+ P+  +Y +L+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 209/449 (46%), Gaps = 53/449 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  F K  ++E+A     D  R G      ++N LI+ YC+   FD  + + + M  
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLD---EMLEMGIPPDVWSYNSLMHCLFQLGK 127
           AGI P   TYN  I          C    +D   E+L     PDV SYN+LMH   ++GK
Sbjct: 337 AGIYPTTSTYNIYICAL-------CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGK 389

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA+ +F D+  GD+ P   T+N +++GLC++   + A R+   +      P+++TY  
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----NRKYKLGLEILSA- 242
           L+KG  K G L  A  +  E+   G  P+   YTT      R    ++ ++L  E+++  
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509

Query: 243 -------------------------------MKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
                                          + R G   D   Y TVI  +++ G+ K A
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            +  ++M+   +   +++Y  LI  + K G+LE A+    EM+K+G   +  TH  L+ G
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-D 387
           +CKAGNI  A  +L  M + G   N  +Y  ++ +     K +  + +++ M   E++ D
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689

Query: 388 SFTYSSMVHNLCK---AKRLPSASKLLLS 413
            +T+ ++  +L K   ++ +    +LLLS
Sbjct: 690 GYTHRALFKHLEKDHESREVEFLERLLLS 718



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +C  C   R++ A  ++         PDVV+YN L+  Y +   F     + 
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLF 397

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +R   I P +VTYN+LI G   +  L  +  L +EM    I PDV +Y +L+    + 
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G    A  V+ +M+   + P    +     G  +   +D A R+   +       P+L  
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN+ I GLCK G L  A    +++   G  P+ +TYTT+++    N ++K+   +   M 
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           RK        Y  +I    K GRL++A  Y  +M   GV+ +++++N L+   CK G ++
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            AY  L +ME++G   +KY++T+LI   C
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNC 666



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 179/425 (42%), Gaps = 11/425 (2%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           IR G LP V   N+++         +    +   M E GI P V+T+N+++    +   L
Sbjct: 195 IRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL 254

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                +  EM    I     +YN L++   + GK +EA R   DM          +FN +
Sbjct: 255 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G CK    D+A  +   +   G  P   TYNI I  LC  GR+  AR    EL  S  
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR----ELLSSMA 370

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           AP+ ++Y T+M    +  K+     +   ++          Y T+I    + G L+ A  
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E+M T  +  D+++Y TL+  + K G L  A  + DEM ++G + D Y +T    G  
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490

Query: 334 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDS 388
           + G+  K  RLH E +       +L  YN  +D L K G +  AI     +F    V D 
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            TY++++    +  +   A  L    L+   R+  S     V    H+   R  +  Q  
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRK--RLYPSVITYFVLIYGHAKAGRLEQAFQYS 608

Query: 449 IRMAK 453
             M K
Sbjct: 609 TEMKK 613



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 9/390 (2%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             +M   G  P V   N ++     + +++ +  + + M+E GI P V ++N+++   F+
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  +  ++++ +M   ++     T+NI++NG  KN   + A R    +++ GF     +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N LI+G CK G    A  +  E+ ++G  P   TY   +       +     E+LS+M 
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                 D   Y T++  ++K+G+  EA+   + +    +   IV+YNTLI+  C+ G LE
Sbjct: 371 AP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L +EM  Q    D  T+T L+ G  K GN+  A    + M + G   +  AY    
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               + G  D A  + E M   D        Y+  +  LCK   L  A +      + G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                    V+ G   +G  + A+ +  ++
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEM 576



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 10/311 (3%)

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           T+ S+    L   ++M+  G  P V + N ++  L      ++A+ V++ MI   + P  
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            TFN ML+   K    +   +++  +++       VTYNILI G  K G++  AR    +
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  SG A    ++  +++   +   +     +   M   G       Y   I A    GR
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + +A + +  M       D+VSYNTL++ Y K GK   A LL D++          T+  
Sbjct: 359 IDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414

Query: 328 LIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           LIDGLC++GN++GA RL  E   ++ F  ++  Y  +V    K+G +  A  V++ M  K
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473

Query: 387 ----DSFTYSS 393
               D + Y++
Sbjct: 474 GIKPDGYAYTT 484



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 8/257 (3%)

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            K    +  L  F  + + GF+P +   NI++K L  +  +  A  + + + + G  P  
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           IT+ T++  CF+    +   +I   MKR+   F    Y  +I  F K G+++EA  +   
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G  +   S+N LI  YCK+G  + A+ + DEM   G      T+ I I  LC  G 
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSS 393
           I  AR  L  M       ++ +YN ++    K GK   A  +F+ +   D      TY++
Sbjct: 359 IDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414

Query: 394 MVHNLCKAKRLPSASKL 410
           ++  LC++  L  A +L
Sbjct: 415 LIDGLCESGNLEGAQRL 431


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 10/317 (3%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+ +   P  V + N+L+    +LG  +E   V++ M    + P   T+N ++NGL    
Sbjct: 159 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 218

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
           + D+A R+F  ++     P++VTYN +IKG CKAG+ + A   L+++   GH  + ITY 
Sbjct: 219 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 278

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T+++ C+ +  +   + +   M  KG       +  VI    K G+L E     E M+  
Sbjct: 279 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 338

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + ++  Y  LI+ Y K G +E A  LL  M  +GF+ D  T++++++GLCK G ++ A
Sbjct: 339 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 398

Query: 342 RLHLEYMNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
              L+Y +   FD    N   Y+ ++D LGK G++D A  +FE M  K    DS+ Y+++
Sbjct: 399 ---LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 455

Query: 395 VHNLCKAKRLPSASKLL 411
           +    K +++  A  L 
Sbjct: 456 IDAFTKHRKVDEAIALF 472



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 179/406 (44%), Gaps = 6/406 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + TYN L++     +  D+   +   M    I PD+VTYN++I G  +      +
Sbjct: 199 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 258

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++ L +M   G   D  +Y +++   +          ++Q+M    +      F++++ G
Sbjct: 259 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 318

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK    +    +F  + + G  P +  Y +LI G  K+G +  A  +L  + D G  P+
Sbjct: 319 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 378

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY+ ++    +N + +  L+     +  G   +   Y ++I    K GR+ EA    E
Sbjct: 379 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 438

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCK 334
           +M   G   D   YN LI+ + K  K++ A  L   ME++   CD+  YT+TIL+ G+ K
Sbjct: 439 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-GCDQTVYTYTILLSGMFK 497

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTY 391
               + A    + M   G       +  +   L   GK+  A  + +    M V      
Sbjct: 498 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC 557

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             M++ LCKA R+  A KL     + G  +    +  +++ LR  G
Sbjct: 558 EDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 603



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 176/408 (43%), Gaps = 9/408 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA + +KA   + D    G   D +TY  +I A      F +   +   M E
Sbjct: 243 NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDE 302

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI      ++ +I G  +   L+    + + M+  G  P+V  Y  L+    + G  ++
Sbjct: 303 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED 362

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+   MI     P   T+++++NGLCKN   + AL  F   +  G     + Y+ LI 
Sbjct: 363 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 422

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYT 249
           GL KAGR+  A  + +E+ + G   ++  Y  ++    ++RK    + +   M + +G  
Sbjct: 423 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 482

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
              + Y  +++   K  R +EA    + M+  G+      +  L    C  GK+  A  +
Sbjct: 483 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 542

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LDE+   G   D      +I+ LCKAG IK A    + + + G +        +++ L K
Sbjct: 543 LDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 601

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            GK D A+ +   M  K    Y  M       KR    + LL +C  S
Sbjct: 602 VGKADLAMKL---MHSKIGIGYERM----GSVKRRVKFTTLLETCFDS 642



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 2/282 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  +  + +  + K+  +E A  ++   I  G  PDVVTY+++++  C+    +    
Sbjct: 341 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 400

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             +  R  G++ + + Y+SLI G  +   +  +  L +EM E G   D + YN+L+    
Sbjct: 401 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 460

Query: 124 QLGKPDEANRVFQDMICGDLTPCTA-TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           +  K DEA  +F+ M   +    T  T+ I+L+G+ K    + AL+++  +   G  P  
Sbjct: 461 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 520

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             +  L  GLC +G++  A  IL EL   G   +A     I   C   R  K   ++   
Sbjct: 521 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGR-IKEACKLADG 579

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           +  +G    G     +I A  K+G+   A   M   +  G +
Sbjct: 580 ITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYE 621


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 4/386 (1%)

Query: 21  NRLE---KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           NRL    +A A  +  +  GV P+   +NML+    +     +   + + M   G+ P V
Sbjct: 218 NRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTV 277

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VT+N+L++G  + S L+ +  L   M + GI PDV++Y + +  L + G+  +A  +F++
Sbjct: 278 VTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEE 337

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    L P T     +++  CK       L +   +   G   +LV YN L+ G C+   
Sbjct: 338 MCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRD 397

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           ++ A  I++E+   G  P+ +TYTT++  C +  +    +E+   M  +G   D   Y  
Sbjct: 398 MKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA 457

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I+   K GR  +A   + +M+  G+Q D  +Y  +I+ +CK G ++  +  L EM+ +G
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 517

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
                 T+ ++++G C  G +K A + L  M  IG   N   YN ++D   K GK+    
Sbjct: 518 KNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE 577

Query: 378 NVFESME-VKDSFTYSSMVHNLCKAK 402
            +  +   V D   Y+S+++   K K
Sbjct: 578 ELKSAKGMVSDFGVYTSLINEFVKKK 603



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 173/362 (47%), Gaps = 3/362 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N+ +    ++ +L  A  +  + +R GV P VVT+N L+   C+    +    +   
Sbjct: 243 RQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGL 302

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +AGI+PDV TY + I G  +   +  ++++ +EM E G+ P+     +L+    + G 
Sbjct: 303 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 362

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
                 +  +M    +      +N ++NG C+ R    A  +   ++K G  P+ VTY  
Sbjct: 363 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 422

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI G CK G L TA  + +E+ D G A + +TYT ++    +  +      IL  M   G
Sbjct: 423 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 482

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  VI AF K G +K    ++++M   G    IV+YN ++N +C  G+++ A 
Sbjct: 483 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 542

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           +LL+ M   G   +  T+ IL+DG CK G ++      E  +  G  S+   Y  +++  
Sbjct: 543 MLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTE---ELKSAKGMVSDFGVYTSLINEF 599

Query: 368 GK 369
            K
Sbjct: 600 VK 601



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 167/349 (47%), Gaps = 41/349 (11%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            +L+ G+PP+   +N LM  + + GK   A  VF +M+   + P   TFN +++G+CK  
Sbjct: 232 HLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKAS 291

Query: 162 YTDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
             +NA    RGL  K G  P++ TY   I+GLCK GR++ A  + +E+ + G  PN +  
Sbjct: 292 DLNNA-NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVL 350

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +      GLE+   M  +G   D   Y  ++  F ++  +K A D +E+M  
Sbjct: 351 TTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRK 410

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG----------------------- 317
           DG++ D V+Y TLI+  CKEG+L+ A  +  EM  +G                       
Sbjct: 411 DGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVD 470

Query: 318 ------------FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
                        + D  T+T++ID  CK G++K    HL+ M   G +  +  YN +++
Sbjct: 471 AERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMN 530

Query: 366 ---RLGKDGKIDHAINVFESMEV-KDSFTYSSMVHNLCKAKRLPSASKL 410
               LG+    D  +N   ++ V  +  TY+ ++   CK  ++    +L
Sbjct: 531 GFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL 579



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 143/323 (44%), Gaps = 38/323 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A  +  +    G+ P+ V    LIDA+C+     AG  +   M   G+  D
Sbjct: 322 LCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKAD 381

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +V YN+L+ G  R   +  + D+++EM + G+ PD  +Y +L                  
Sbjct: 382 LVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL------------------ 423

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                            ++G CK    D A+ M + +   G   + VTY  LI GL KAG
Sbjct: 424 -----------------IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAG 466

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R   A  IL E+ ++G  P+  TYT ++    +N   K G + L  M+ KG       Y 
Sbjct: 467 RSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYN 526

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            V+  F  +G++K A   +  M+  GV  + ++YN L++ +CK GK+     L      +
Sbjct: 527 VVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL---KSAK 583

Query: 317 GFECDKYTHTILIDGLCKAGNIK 339
           G   D   +T LI+   K  + K
Sbjct: 584 GMVSDFGVYTSLINEFVKKKSAK 606



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 31/269 (11%)

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  PE   +N+L++ + ++G+L +AR +  E+   G  P  +T+ T+M    +       
Sbjct: 237 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
             +   M + G   D + Y   I    K GR+++A +  E+M   G+  + V   TLI+ 
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           +CKEG + A   L  EM  +G + D   +  L++G C+  ++K A               
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAA--------------- 401

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
               N IV+ + KDG               D  TY++++   CK   L +A ++      
Sbjct: 402 ----NDIVEEMRKDGL------------KPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD 445

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            GV +      A++ GL  +G   +A++I
Sbjct: 446 EGVALDDVTYTALISGLSKAGRSVDAERI 474


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 206/422 (48%), Gaps = 14/422 (3%)

Query: 21  NRLEKAEAIII--DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           + L  A A ++  D  RL +     T+N+++   C          +L +M     SP+ V
Sbjct: 93  SSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAV 148

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           TYN++IAG      +   ++++ EM E G I PD ++Y +++    ++GK ++A +VF +
Sbjct: 149 TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDE 208

Query: 138 MIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-LQKHGFVPELVTYNILIKGLCKA 195
           M+  G + P    +N ++ G C     + ALR +RG +   G    + TYN+ +  L   
Sbjct: 209 MLTEGKVEPNAVMYNALIGGYCDQGNLEVALR-YRGEMVDRGVSMTVATYNLFVHTLFME 267

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR   A  +++E+G+ G AP+A TY  ++    +  K K  +++   M  KG       Y
Sbjct: 268 GRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTY 327

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I A    G ++E        V  G++ D+  YN LIN +C  G ++ A+ ++ EMEK
Sbjct: 328 TSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEK 387

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +    D  T+  L+ GLC  G +  AR  +E M K G   +L +YN ++      G I  
Sbjct: 388 KRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKD 447

Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+ V + M  K       TY++M+  LC   +   A  L+   + +G+    S   ++++
Sbjct: 448 AVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIE 507

Query: 432 GL 433
           GL
Sbjct: 508 GL 509



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 168/359 (46%), Gaps = 2/359 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM- 68
           N  +  FC   R++    I+ +   R G+ PD  TY  +I  +C+    +    + + M 
Sbjct: 151 NTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEML 210

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E  + P+ V YN+LI G      L  +L    EM++ G+   V +YN  +H LF  G+ 
Sbjct: 211 TEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRA 270

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA+ + ++M    L P   T+NI++NG CK      A++MF  +   G    +VTY  L
Sbjct: 271 AEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSL 330

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L   G ++    +  +    G  P+   Y  ++             EI+  M++K  
Sbjct: 331 IHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRI 390

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           T D   Y T++     +GRL EA   +E+M   G+Q D+VSYNTLI+ Y  +G ++ A  
Sbjct: 391 TPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVK 450

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           + DEM  +GF     T+  +I GLC  G    A   ++ M   G   +   Y  +++ L
Sbjct: 451 VRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 49/397 (12%)

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           + SL L   +  + +P    S + L+  L     P  A  +F D+    L   T TFNIM
Sbjct: 67  TTSLSLYSRLKSLSLPIPTASLHPLLSSL----PPAPAFVLFADIFRLRLPLSTTTFNIM 122

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           L  LC       AL + R +      P  VTYN +I G C  GR++    I++E+ + G 
Sbjct: 123 LRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGG 178

Query: 214 -APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGYCTVIAAFVKIGRLKEA 271
            AP+  TY T++    +  K +   ++   M  +G    +   Y  +I  +   G L+ A
Sbjct: 179 IAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVA 238

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
             Y  +MV  GV + + +YN  ++    EG+   A+ L++EM ++G   D +T+ ILI+G
Sbjct: 239 LRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILING 298

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV------------DRLGKD--------- 370
            CK G  K A    E M   G  + +  Y  ++            DRL  D         
Sbjct: 299 YCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPD 358

Query: 371 --------------GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
                         G +D A  +   ME K    D  TY++++  LC   RL  A  L+ 
Sbjct: 359 LFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIE 418

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              K G++    +   ++ G    G  ++A K++ ++
Sbjct: 419 EMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEM 455



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 138/298 (46%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  +C    LE A     + +  GV   V TYN+ +            + ++  M
Sbjct: 221 MYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEM 280

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E G++PD  TYN LI G  +      ++ + + M+  GI   V +Y SL+H L   G  
Sbjct: 281 GEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMV 340

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E +R+F D +   + P    +N ++N  C     D A  +   ++K    P+ VTYN L
Sbjct: 341 QETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTL 400

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           ++GLC  GRL  AR +++E+   G  P+ ++Y T++         K  +++   M  KG+
Sbjct: 401 MRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGF 460

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                 Y  +I      G+  +A D +++MV +G+  D  +Y +LI     E +  AA
Sbjct: 461 NPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAA 518



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 163/340 (47%), Gaps = 20/340 (5%)

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL---GKPDEAN-RVFQDMICGDLTPCT 147
           L   +L     +  + + P + +  SL H L      G+P   +  ++  +    L   T
Sbjct: 26  LFKSALSADPALSPLAVLPHLAATPSLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPIPT 85

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           A+ + +L+ L        A  +F  + +        T+NI+++ LC AG+   A  +L++
Sbjct: 86  ASLHPLLSSLPPA----PAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQ 141

Query: 208 LGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMK-RKGYTFDGFGYCTVIAAFVKI 265
           +     +PNA+TY T++   C R R  + G+EI+  M+ R G   D + Y TVI+ + K+
Sbjct: 142 M----PSPNAVTYNTVIAGFCARGR-VQAGIEIMREMRERGGIAPDKYTYATVISGWCKV 196

Query: 266 GRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           G++++AT   ++M+T+G V+ + V YN LI  YC +G LE A     EM  +G      T
Sbjct: 197 GKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVAT 256

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           + + +  L   G    A   +E M + G   +   YN +++   K+GK   A+ +FE M 
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            K       TY+S++H L     +    +L    ++ G+R
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIR 356


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 194/393 (49%), Gaps = 7/393 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           N  +   C+  R+  A  +++DG+   G  PDVVTYN+L+ A C+   +     +++ MR
Sbjct: 167 NPLIHALCERGRVADA-LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMR 225

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P+ VTYN +I    R   +  + +LL+ +   G  P+  +YN+++     + +  
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A+ +  +M+  +  P  AT N+++N LC+             + KHG    +VTYN +I
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G+C+ G + +A  +L  +   G  P+ +TY T++K      +++   E++  M +    
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   + T+I+ + + G + +A +  +QM   G   +  +Y+T+I    K GK+E A  L
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L+EM  +GF  DK  + +L + L K   I+     +  +   G       YN ++  L +
Sbjct: 466 LNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 524

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNL 398
           +GK D+AI+V   M     + D  TY  ++  L
Sbjct: 525 NGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 210/444 (47%), Gaps = 19/444 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVV------TYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +C+A  LE A  ++      G +P  V       +N LI A C+         +L+ M  
Sbjct: 138 YCRAGLLEDARRVV------GGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLC 191

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +PDVVTYN L+  A +      +L+L+D M   G  P+  +YN ++  + + G  D+
Sbjct: 192 RGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQ 251

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           A  +   +      P T  +N +L G C   R+ D A  +   + +    P   T N++I
Sbjct: 252 ARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVD-ADEILDEMVRENCPPNEATLNVII 310

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LC+ G L+     L+++   G   N +TY  ++            LE+LS M+  G  
Sbjct: 311 NTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCK 370

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y TV+       R ++A + M +M  +    D  ++NT+I+ +C++G +  A+ +
Sbjct: 371 PDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEV 430

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             +M ++G   +  T++ +I GL KAG ++ A   L  M   GF+++ + Y  + + L K
Sbjct: 431 FKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNK 489

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           + KI+  + V   ++       +  Y++++  LC+  +   A  +L   +  G    +S 
Sbjct: 490 EDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDEST 549

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
              +++GL + G  +EA+++ S++
Sbjct: 550 YIILIEGLFYEGYSKEARELLSRL 573



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 162/308 (52%), Gaps = 7/308 (2%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PPDV   N L+  L + G+P +A RV +   CG      AT+  +++G C+    ++A R
Sbjct: 93  PPDVPLANRLVRDLCRRGRPADAARVVE--ACGP-EATAATYGALVDGYCRAGLLEDARR 149

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +  G+  H        +N LI  LC+ GR+  A  +L  +   G AP+ +TY  +++   
Sbjct: 150 VVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAAC 209

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           + R Y+  LE++  M+ +G   +   Y  +I A  + G + +A + +  + + G + + V
Sbjct: 210 KGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTV 269

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YNT++  +C   +   A  +LDEM ++    ++ T  ++I+ LC+ G ++   L+LE M
Sbjct: 270 NYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKM 329

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 404
           +K G  +N+  YN ++  + + G +D A+ +  +M+      D  TY++++  LC A R 
Sbjct: 330 SKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW 389

Query: 405 PSASKLLL 412
             A +L++
Sbjct: 390 EDAEELMI 397



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 1/274 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ + T C+   L+K    +    + G   +VVTYN +I   C+  + D+   +L+ M+
Sbjct: 306 LNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD+VTYN+++ G         + +L+ +M +    PD  ++N+++    Q G   
Sbjct: 366 SFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLIL 425

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  VF+ M      P + T++ ++ GL K    + AL +   +   GF  + + Y +L 
Sbjct: 426 QAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLT 484

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           + L K  ++     ++ +L DSG +P  + Y T++    RN K    +++L+ M   G  
Sbjct: 485 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCM 544

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
            D   Y  +I      G  KEA + + ++ +  V
Sbjct: 545 PDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 39/481 (8%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+  + V  +C+  R+E A  I  + +R+G+  ++V  N LI  YC+         +   
Sbjct: 333 RVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVG 392

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + PD  +YN+L+ G  R   +S +  L +EML  GI P V +YN+++  L  +G 
Sbjct: 393 MVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGS 452

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D+A  ++  M+   +TP   +   ML+   K   +D A+ +++ +   GF    V +N 
Sbjct: 453 YDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNT 512

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I GLCK G+L  A  +   + + G +P+ ITY T+     +N   +   +I   M+R+ 
Sbjct: 513 MISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQA 572

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
            +     Y ++I    KI +L + TD + +M T G+  ++V+Y TLI+ +C E KL+ A+
Sbjct: 573 MSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAF 632

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM---------NK-----IGF 353
            L  EM ++GF  +    + ++  L +   I  A + L+ M         NK     +  
Sbjct: 633 HLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKN 692

Query: 354 DSNLEA---------------------YNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           D  LEA                     YN  +D L K GK+D A +V   +  +    D+
Sbjct: 693 DLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDN 752

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
           FTY +++H    +  +  A KL    L+ G+    +   A+++GL   G    A+++  K
Sbjct: 753 FTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYK 812

Query: 449 I 449
           +
Sbjct: 813 L 813



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 199/413 (48%), Gaps = 5/413 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V   C+  R++ A  ++   ++ G+ P+VVTYN L++ Y     F+    +L  M E
Sbjct: 230 SIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSE 289

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPD 129
            G+S +VVT   L+ G  +   +  +  LL E+ E   +  D   Y  L+    Q+G+ +
Sbjct: 290 RGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRME 349

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A R+  +M+   L       N ++ G CK      A R+F G+      P+  +YN L+
Sbjct: 350 DAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLL 409

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+ G++  A  + +E+   G  P  +TY T++K       Y   L +   M  +G T
Sbjct: 410 DGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVT 469

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +    CT++  F K+G    A    ++++  G     V++NT+I+  CK GKL  A  +
Sbjct: 470 PNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV 529

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            D M++ G   D+ T+  L DG CK GN++ A      M +    +++E YN ++D L K
Sbjct: 530 FDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFK 589

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             K++   ++   M+ +    +  TY +++   C  ++L  A  L    ++ G
Sbjct: 590 IRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERG 642



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 212/490 (43%), Gaps = 74/490 (15%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++  + N  +  +CK  ++ +AE + +  +   + PD  +YN L+D YC+       + 
Sbjct: 364 KVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFM 423

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   GI+P VVTYN++I G         +L L   M+E G+ P+  S  +++ C F
Sbjct: 424 LCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFF 483

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G  D A  ++++++    T  T  FN M++GLCK      A  +F  +++ G  P+ +
Sbjct: 484 KMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEI 543

Query: 184 TYNILIKGLCKAGRLRTARWI-----------------------------------LKEL 208
           TY  L  G CK G ++ A  I                                   L E+
Sbjct: 544 TYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEM 603

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G +PN +TY T++      +K      +   M  +G+T +      ++++  +  R+
Sbjct: 604 QTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRI 663

Query: 269 KEATDYMEQM----------------VTDGVQLDI-------------------VSYNTL 293
            EAT  +++M                V + + L+                    + YN  
Sbjct: 664 SEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIA 723

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+  CK GKL+ A  +L  +  +GF  D +T+  LI     +GN+  A    + M + G 
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
             N+  YN +++ L K G ID A  +F  +     V ++ TY+ ++   C+   L  AS+
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843

Query: 410 LLLSCLKSGV 419
           L     + G+
Sbjct: 844 LREKMTEEGI 853



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 154/356 (43%), Gaps = 35/356 (9%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G     V +N +I   C+         + +RM+E G+SPD +TY +L  G  +N  +  +
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +   M    +   +  YNSL+  LF++ K ++   +  +M    L+P   T+  +++G
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL----------- 205
            C  +  D A  ++  + + GF P +V  + ++  L +  R+  A  IL           
Sbjct: 622 WCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAV 681

Query: 206 -----------------KELGDS-------GHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
                            +++ DS           N I Y   +    ++ K      +LS
Sbjct: 682 HNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLS 741

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            +  +G+  D F YCT+I A    G + EA    ++M+  G+  +I  YN LIN  CK G
Sbjct: 742 VLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLG 801

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
            ++ A  L  ++ ++G   +  T+ ILI   C+ G++  A    E M + G  + +
Sbjct: 802 NIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRI 857



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 196/418 (46%), Gaps = 7/418 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            ++ML+ A+ +         + + M   G  P + + + L+    +      ++ + D++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +  GI PDV+  + +++   Q+G+ D A  V + M+   L P   T+N ++NG       
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTT 222
           +   R+ R + + G    +VT  +L++G CK G++  A  +L+E+  D     +   Y  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +  + +  + I   M R G   +     T+I  + K+G++ EA      MV   
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ D  SYNTL++ YC+EGK+  A++L +EM   G      T+  +I GL   G+   A 
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDA- 456

Query: 343 LHLEY-MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
           LHL + M + G   N  +   ++D   K G  D A+ +++ +      K +  +++M+  
Sbjct: 457 LHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           LCK  +L  A  +     + G+   +   + + DG   +G  +EA +I+  +    +S
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMS 574



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 139/353 (39%), Gaps = 70/353 (19%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +   CK  +L +A A+      LG+ PD +TY  L D YC+  +    + I 
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIK 565

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M    +S  +  YNSLI G  +   L+   DLL EM   G+ P+V +Y +L+      
Sbjct: 566 GVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDE 625

Query: 126 GKPDEANRVFQDMICGDLTP--------------------CTATFNIMLN---------- 155
            K D+A  ++ +MI    TP                     T   + ML+          
Sbjct: 626 QKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKC 685

Query: 156 --GLCKNRYTDNALRMFRGLQKHGFVPEL---VTYNILIKGLCKAGRLRTARWILKELGD 210
              L KN  T  A ++   L K      L   + YNI I GLCK+G+L  AR +L  L  
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 211 SGHAPNAITYTTIMKCC-----------FRNRKYKLGL---------------------- 237
            G  P+  TY T++  C            R+   + GL                      
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 238 --EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
              +   + +KG   +   Y  +I  + +IG L +A+   E+M  +G+   I+
Sbjct: 806 AQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 158/375 (42%), Gaps = 59/375 (15%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL-- 167
           P   SY+ L+H L       EA  V + ++  DL              C N Y   A+  
Sbjct: 99  PHSLSYSILLHILTHARLFPEATTVLRQLM--DLH-------------CTNNYRAYAVCN 143

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            +F   ++ GF   +  +++L+K   + G  + A ++  E+   G  P   + + ++   
Sbjct: 144 HVFSVYKEFGFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKL 201

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            +  + ++ + +   +   G   D +    V+ A  ++GR+  A + +E+MV +G++ ++
Sbjct: 202 VQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNV 261

Query: 288 VSYNTLIN-----------------------------------LYCKEGKLEAAYLLLDE 312
           V+YN L+N                                    YCK+GK++ A  LL E
Sbjct: 262 VTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLRE 321

Query: 313 MEK-QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +E+ +    D+  + +L+DG C+ G ++ A    + M ++G   N+   N ++    K G
Sbjct: 322 VEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLG 381

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           ++  A  VF  M       D ++Y++++   C+  ++  A  L    L  G+        
Sbjct: 382 QVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYN 441

Query: 428 AVVDGLRHSGCRREA 442
            V+ GL   G   +A
Sbjct: 442 TVIKGLVDVGSYDDA 456


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 166/322 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+E+A  ++   +  G++P+ VTYN LID  C     D  +   + M  
Sbjct: 291 NSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMN 350

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI   V TYN LI        +  + D++ EM E G+ PDV +YN  ++   + G   +
Sbjct: 351 RGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKK 410

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F +M+  ++ P   T+  +++   K      A   F+   K G +P+++ +N LI 
Sbjct: 411 ALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALID 470

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C  G +  A  +LKE+ ++   P+ +T+ T+M+   R RK +   ++L  MK +G   
Sbjct: 471 GHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKP 530

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I+ + K G +K+A +  ++M++ G    +++YN LI  Y K G+ + A  LL
Sbjct: 531 DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590

Query: 311 DEMEKQGFECDKYTHTILIDGL 332
            EM+ +G   D  T+  +I+ +
Sbjct: 591 REMQSKGITPDDSTYLYVIEAM 612



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 201/415 (48%), Gaps = 5/415 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           RL V   +V +++L+ AYCQF   D     LN M+E  I P   T NSL++   + + + 
Sbjct: 141 RLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIK 199

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  + +EM++M I   + ++N +++ L + GK  +A      M    + P   T+N ++
Sbjct: 200 MAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVI 259

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG C     + A ++F+ ++     P+  TYN  I  LCK  R+  A  +L +L +SG  
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PNA+TY  ++  C               M  +G     F Y  +I A     R++EA D 
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +++M   GV+ D+V+YN  IN YC+ G  + A  L DEM ++       T+T LID   K
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
              +  A    +   K G   ++  +N ++D    +G ID A  + + M+    V D  T
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +++++   C+ +++  A KLL    + G++    +   ++ G    G  ++A ++
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 179/397 (45%), Gaps = 39/397 (9%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +++ +   +VT+N++I+  C+   +      +  M   G+ P+VVTYN++I G       
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  +   M +  + PD ++YNS +  L +  + +EA+ V   ++   L P   T+N +
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G C     D A      +   G V  + TYN+LI  L    R+  A  ++KE+ + G 
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ +TY   +    R    K  L +   M  K        Y ++I  F K  R+ EA +
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 274 YMEQMVTDGVQLDI-----------------------------------VSYNTLINLYC 298
             ++ + +G+  DI                                   V++NTL+  YC
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           +E K+E A  LLDEM+++G + D  ++  LI G  K G++K A    + M  +GFD  L 
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLL 568

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
            YN ++    K G+ DHA  +   M+ K    D  TY
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 35/255 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ-------FVSFDA--- 60
           N+ +       R+E+AE +I +    GV PDVVTYN+ I+ YC+          FD    
Sbjct: 361 NLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE 420

Query: 61  --------GYTIL-------NRMREA----------GISPDVVTYNSLIAGATRNSLLSC 95
                    YT L       NRM EA          G+ PD++ +N+LI G   N  +  
Sbjct: 421 KNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDR 480

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  LL EM    + PD  ++N+LM    +  K +EA ++  +M    + P   ++N +++
Sbjct: 481 AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLIS 540

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G  K     +AL +F  +   GF P L+TYN LI+G  K G    A  +L+E+   G  P
Sbjct: 541 GYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITP 600

Query: 216 NAITYTTIMKCCFRN 230
           +  TY  +++    N
Sbjct: 601 DDSTYLYVIEAMKTN 615



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 85/152 (55%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +   C    +++A  ++ +     V+PD VT+N L+  YC+    +    +L+ M
Sbjct: 464 MFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEM 523

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +E GI PD ++YN+LI+G ++   +  +L++ DEML +G  P + +YN+L+    ++G+ 
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEA 583

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           D A  + ++M    +TP  +T+  ++  +  N
Sbjct: 584 DHAEELLREMQSKGITPDDSTYLYVIEAMKTN 615


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 10/317 (3%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+ +   P  V + N+L+    +LG  +E   V++ M    + P   T+N ++NGL    
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
           + D+A R+F  ++     P++VTYN +IKG CKAG+ + A   L+++   GH  + ITY 
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T+++ C+ +  +   + +   M  KG       +  VI    K G+L E     E M+  
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + ++  Y  LI+ Y K G +E A  LL  M  +GF+ D  T++++++GLCK G ++ A
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416

Query: 342 RLHLEYMNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
              L+Y +   FD    N   Y+ ++D LGK G++D A  +FE M  K    DS+ Y+++
Sbjct: 417 ---LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473

Query: 395 VHNLCKAKRLPSASKLL 411
           +    K +++  A  L 
Sbjct: 474 IDAFTKHRKVDEAIALF 490



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 179/406 (44%), Gaps = 6/406 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P + TYN L++     +  D+   +   M    I PD+VTYN++I G  +      +
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++ L +M   G   D  +Y +++   +          ++Q+M    +      F++++ G
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK    +    +F  + + G  P +  Y +LI G  K+G +  A  +L  + D G  P+
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY+ ++    +N + +  L+     +  G   +   Y ++I    K GR+ EA    E
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHTILIDGLCK 334
           +M   G   D   YN LI+ + K  K++ A  L   ME++   CD+  YT+TIL+ G+ K
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-GCDQTVYTYTILLSGMFK 515

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES---MEVKDSFTY 391
               + A    + M   G       +  +   L   GK+  A  + +    M V      
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC 575

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             M++ LCKA R+  A KL     + G  +    +  +++ LR  G
Sbjct: 576 EDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 621



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 2/373 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA + +KA   + D    G   D +TY  +I A      F +   +   M E
Sbjct: 261 NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDE 320

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI      ++ +I G  +   L+    + + M+  G  P+V  Y  L+    + G  ++
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED 380

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+   MI     P   T+++++NGLCKN   + AL  F   +  G     + Y+ LI 
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYT 249
           GL KAGR+  A  + +E+ + G   ++  Y  ++    ++RK    + +   M + +G  
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 500

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
              + Y  +++   K  R +EA    + M+  G+      +  L    C  GK+  A  +
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           LDE+   G   D      +I+ LCKAG IK A    + + + G +        +++ L K
Sbjct: 561 LDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 619

Query: 370 DGKIDHAINVFES 382
            GK D A+ +  S
Sbjct: 620 VGKADLAMKLMHS 632



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 2/282 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  +  + +  + K+  +E A  ++   I  G  PDVVTY+++++  C+    +    
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             +  R  G++ + + Y+SLI G  +   +  +  L +EM E G   D + YN+L+    
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478

Query: 124 QLGKPDEANRVFQDMICGDLTPCTA-TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           +  K DEA  +F+ M   +    T  T+ I+L+G+ K    + AL+++  +   G  P  
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 538

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
             +  L  GLC +G++  A  IL EL   G   +A     I   C   R  K   ++   
Sbjct: 539 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGR-IKEACKLADG 597

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           +  +G    G     +I A  K+G+   A   M   +  G +
Sbjct: 598 ITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYE 639


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 215/462 (46%), Gaps = 62/462 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A+++E A  +  +  R G++ DV TY +++D++C+    +      N MRE G +P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           VVTY +LI    +   +S + +L + ML  G  P++ +Y++L+  HC  + G+ ++A ++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC--KAGQMEKACQI 610

Query: 135 FQDMICGDLT------------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           F+ M CG                     P    +  +L+G CK    + A ++   +   
Sbjct: 611 FERM-CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSME 669

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G  P  + Y+ LI GLCK G+L  A+ +  E+ + G      TY++++   F+ ++  L 
Sbjct: 670 GCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 729

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            ++LS M       +   Y  +I    K+G+  EA   M+ M   G Q ++V+Y  +I+ 
Sbjct: 730 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 789

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM-------- 348
           + + GK+E    LL+ M  +G   +  T+ +LID  CK G +  A   LE M        
Sbjct: 790 FGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 849

Query: 349 ----------------------NKIGFDSN---LEAYNCIVDRLGKDGKIDHAINVFESM 383
                                 ++IG D     L  Y  +VD L K  +++ A+ + E +
Sbjct: 850 AAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV 909

Query: 384 E------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
                  V  S TY+S++ +LC A ++  A +L     K GV
Sbjct: 910 ATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGV 951



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 181/385 (47%), Gaps = 17/385 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + EKA ++I + I  G +PD  TY+ ++   C     +  + +   M+  G+  D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  ++    +  L+  +    +EM E+G  P+V +Y +L+H   +  K   AN +F+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL-------------- 182
            M+     P   T++ +++G CK    + A ++F  +     VP++              
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637

Query: 183 ---VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
              V Y  L+ G CK  R+  AR +L  +   G  PN I Y  ++    +  K     E+
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            + M   G+    + Y ++I  + K+ R   A+  + +M+ +    ++V Y  +I+  CK
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GK + AY L+  ME++G + +  T+T +IDG  + G I+     LE M   G   N   
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 360 YNCIVDRLGKDGKIDHAINVFESME 384
           Y  ++D   K+G +D A N+ E M+
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMK 842



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 198/428 (46%), Gaps = 27/428 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG--ATRNSLLS 94
           G  P    +N L+ AYC        Y +L +M + G +P  V YN LI      ++SL  
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSC 426

Query: 95  CSLDLLD----EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             L+L +    EML  G+  +  + +S   CL   GK ++A  V ++MI     P T+T+
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           + +L  LC     + A  +F  +++ G V ++ TY I++   CKAG +  AR    E+ +
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  PN +TYT ++    + +K     E+   M  +G   +   Y  +I    K G++++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606

Query: 271 ATDYMEQM-----VTD------------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           A    E+M     V D              + ++V Y  L++ +CK  ++E A  LLD M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             +G E ++  +  LIDGLCK G +  A+     M++ GF + L  Y+ ++DR  K  + 
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           D A  V   M       +   Y+ M+  LCK  +   A KL+    + G +       A+
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 786

Query: 430 VDGLRHSG 437
           +DG    G
Sbjct: 787 IDGFGRIG 794



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 4/340 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV Y  L+D +C+    +    +L+ M   G  P+ + Y++LI G  +   L  + ++
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             EM E G P  +++Y+SL+   F++ + D A++V   M+     P    +  M++GLCK
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              TD A ++ + +++ G  P +VTY  +I G  + G++ T   +L+ +G  G APN +T
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++  C +N    +   +L  MK+  +     GY  VI  F K     E+   ++++ 
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EFIESLGLLDEIG 875

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI--LIDGLCKAGN 337
            D     +  Y  L++   K  +LE A  LL+E+         Y+ T   LI+ LC A  
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           +  A      M+K G    ++ +  ++  L ++ KI  A+
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 204/470 (43%), Gaps = 64/470 (13%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +PD V Y  LI   C+   F+     LNRMR     P+VVTY++L+ G      L     
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGL 157
           +L+ M+  G  P    +NSL+H     G    A ++ + M+ CG  TP    +NI++  +
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-TPGYVVYNILIGSI 417

Query: 158 CKNRYT-----------------------------------------DNALRMFRGLQKH 176
           C ++ +                                         + A  + R +   
Sbjct: 418 CGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           GF+P+  TY+ ++  LC A ++  A  + +E+   G   +  TYT ++    +    +  
Sbjct: 478 GFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            +  + M+  G T +   Y  +I A++K  ++  A +  E M+++G   +IV+Y+ LI+ 
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597

Query: 297 YCKEGKLEAAYLLLDEM--EKQGFECDKY---------------THTILIDGLCKAGNIK 339
           +CK G++E A  + + M   K   + D Y                +  L+DG CK   ++
Sbjct: 598 HCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVE 657

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            AR  L+ M+  G + N   Y+ ++D L K GK+D A  V   M         +TYSS++
Sbjct: 658 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI 717

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               K KR   ASK+L   L++           ++DGL   G   EA K+
Sbjct: 718 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 192/432 (44%), Gaps = 21/432 (4%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           LE AE    + +  GV+ + +  +      C    ++  ++++  M   G  PD  TY+ 
Sbjct: 429 LELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           ++      S +  +  L +EM   G+  DV++Y  ++    + G  ++A + F +M    
Sbjct: 489 VLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
            TP   T+  +++   K +    A  +F  +   G +P +VTY+ LI G CKAG++  A 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKAC 608

Query: 203 WILKEL-----------------GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I + +                  D+   PN + Y  ++    +  + +   ++L AM  
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSM 668

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   +   Y  +I    K+G+L EA +   +M   G    + +Y++LI+ Y K  + + 
Sbjct: 669 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDL 728

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +L +M +     +   +T +IDGLCK G    A   ++ M + G   N+  Y  ++D
Sbjct: 729 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
             G+ GKI+  + + E M  K    +  TY  ++ + CK   L  A  LL    ++    
Sbjct: 789 GFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 848

Query: 422 LKSAQKAVVDGL 433
             +  + V++G 
Sbjct: 849 HAAGYRKVIEGF 860



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 177/415 (42%), Gaps = 33/415 (7%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLF 123
           L  M      PD V Y  LI+G    SL   ++D L+ M      P+V +Y++L+  CL 
Sbjct: 290 LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 124 --QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             QLG+     RV   M+     P    FN +++  C +     A ++ + + K G  P 
Sbjct: 350 KKQLGR---CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPG 406

Query: 182 LVTYNILIKGLC------KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
            V YNILI  +C          L  A     E+  +G   N I  ++  +C     KY+ 
Sbjct: 407 YVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              ++  M  +G+  D   Y  V+       +++ A    E+M   G+  D+ +Y  +++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            +CK G +E A    +EM + G   +  T+T LI    KA  +  A    E M   G   
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESM---------------------EVKDSFTYSSM 394
           N+  Y+ ++D   K G+++ A  +FE M                     E  +   Y ++
Sbjct: 587 NIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGAL 646

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +   CK  R+  A KLL +    G    +    A++DGL   G   EA+++++++
Sbjct: 647 LDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM 701



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 172/411 (41%), Gaps = 48/411 (11%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+L+  YC+  SF      L R+++    P   TYN LI    +   L  +  +  EM  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             +  D ++     + L ++GK  EA  +   M   +  P T  +  +++GLC+    + 
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEE 320

Query: 166 ALRMFRGLQKHGFVPELVTY-----------------------------------NILIK 190
           A+     ++    +P +VTY                                   N L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM------KCCFRNRKYKLGLEILSAMK 244
             C +G    A  +LK++   GH P  + Y  ++      K        +L  +  S M 
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEML 440

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +     +        G+ ++A   + +M+  G   D  +Y+ ++   C   K+E
Sbjct: 441 ATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+LL +EM++ G   D YT+TI++D  CKAG I+ AR     M ++G   N+  Y  ++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               K  K+ +A  +FE+M     + +  TYS+++   CKA ++  A ++ 
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIF 611



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 142/335 (42%), Gaps = 35/335 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  +L++A+ +  +    G    + TY+ LID Y +    D    +L++M E   +P+
Sbjct: 685 LCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 744

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  +I G  +      +  L+  M E G  P+V +Y +++    ++GK +    + +
Sbjct: 745 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLE 804

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+ ++++  CKN   D A  +   +++  +      Y  +I+G  K  
Sbjct: 805 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK-- 862

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               +  +L E+G    AP    Y  ++    + ++ ++ L +L  +             
Sbjct: 863 EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV------------A 910

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T  A  V         DY              +YN+LI   C   K++ A+ L  EM K+
Sbjct: 911 TFSATLV---------DYSS------------TYNSLIESLCLANKVDKAFRLFSEMSKK 949

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           G   +  T   LI GL +   I  A L L++++ +
Sbjct: 950 GVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHM 984



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 9/269 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R + A  ++   +     P+VV Y  +ID  C+    D  Y ++  M E G  P+
Sbjct: 720 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 779

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLFQLGKPDEANRVF 135
           VVTY ++I G  R   +   L+LL+ M   G+ P+  +Y  L+ HC  + G  D A+ + 
Sbjct: 780 VVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC-KNGALDVAHNLL 838

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M         A +  ++ G   N+    +L +   + +    P L  Y +L+  L KA
Sbjct: 839 EEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896

Query: 196 GRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            RL  A  +L+E+    +     + TY ++++      K      + S M +KG   +  
Sbjct: 897 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQ 956

Query: 254 GYCTVIAAFVKIGRLKEA---TDYMEQMV 279
            +C++I    +  ++ EA    D++  MV
Sbjct: 957 TFCSLIKGLFRNSKISEALLLLDFISHMV 985



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           L  + V    KA RLE A  ++  +      ++    TYN LI++ C     D  + + +
Sbjct: 885 LYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFS 944

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
            M + G+ P++ T+ SLI G  RNS +S +L LLD +  M  P
Sbjct: 945 EMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVCP 987


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 206/442 (46%), Gaps = 4/442 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   +L  A  +I    R   +P   +   LI    +  S +    +L  M  +G  PD
Sbjct: 49  LCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPD 108

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++TYN L+ G  +  LL  +++LLDEM   G PPD  +YN+++ C+F  G  D+A   ++
Sbjct: 109 IITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWK 168

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           D +         T+ +++  +CK+  T  A+ +   +   G  P++VTYN L+   CK G
Sbjct: 169 DQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQG 228

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +      I+  L   G  PN +TY T++     +  +    EIL  M           Y 
Sbjct: 229 KYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYN 288

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G L  A ++ +QMV+     DI++YNTL+   CKEG ++ A  LL  +   
Sbjct: 289 ILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDT 348

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
                  T+ I+IDGL K G ++ A      M + GF  +   +  +   L +   ++ A
Sbjct: 349 RCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDA 408

Query: 377 INVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + + + M  ++    +S    ++H LCK K++  A ++L   + S  +  +    A++ G
Sbjct: 409 LVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKG 468

Query: 433 LRHSGCRREAKKIQSKIRMAKI 454
           +  +G   EA ++  K+   K+
Sbjct: 469 VGAAGMIEEANQLHQKLTELKV 490



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 164/343 (47%), Gaps = 4/343 (1%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
           D  + N ++  L   GK   A+R+   M   +  P   +   ++ GL K   T+ A R+ 
Sbjct: 38  DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           + +   G +P+++TYN+L+ GLCK G L+TA  +L E+  SG  P+AITY TI++C F +
Sbjct: 98  KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 157

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
             +   +       RKG       Y  +I    K     +A + +E M  +G   DIV+Y
Sbjct: 158 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 217

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           N+L+N  CK+GK E   L++  +   G   +  T+  L+  LC  G        L  MN 
Sbjct: 218 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 277

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPS 406
                 +  YN +++ L K G +D AIN F+ M     + D  TY++++  LCK   +  
Sbjct: 278 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 337

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           A  LL S   +           V+DGL   GC  +A ++  ++
Sbjct: 338 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM 380



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 180/413 (43%), Gaps = 35/413 (8%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K    E+A  ++   +  G +PD++TYNML+   C+         +L+ M  +G  PD +
Sbjct: 86  KLESTERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAI 145

Query: 79  TYNSLI------------AGATRNSL----------------LSC-------SLDLLDEM 103
           TYN+++             G  ++ L                L C       ++++L++M
Sbjct: 146 TYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDM 205

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G  PD+ +YNSL++   + GK ++   +  +++   + P T T+N +L+ LC + Y 
Sbjct: 206 AIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYW 265

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D    +   +      P +VTYNILI GLCK G L  A     ++      P+ ITY T+
Sbjct: 266 DEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTL 325

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +       L +L ++     +     Y  VI    K G +++A +   +M+  G 
Sbjct: 326 LAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGF 385

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D +++ TL     +   +E A ++L EM K+           +I GLCK   +  A  
Sbjct: 386 APDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQ 445

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVH 396
            LE M       N E Y+ I+  +G  G I+ A  + + +     F   +M H
Sbjct: 446 VLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREETMPH 498



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 101/200 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   L++A       +    LPD++TYN L+ A C+    D    +L+ + +
Sbjct: 288 NILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLND 347

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SP ++TYN +I G  +   +  +++L  EM+E G  PD  ++ +L   LF+L   ++
Sbjct: 348 TRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVED 407

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M   +     + F  +++GLCK +  D A+++   +      P    Y+ +IK
Sbjct: 408 ALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIK 467

Query: 191 GLCKAGRLRTARWILKELGD 210
           G+  AG +  A  + ++L +
Sbjct: 468 GVGAAGMIEEANQLHQKLTE 487


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 200/414 (48%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+  D +T N++I+  C+      G+++L  M + G+ P V+T  +LI G      ++ 
Sbjct: 106 LGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQ 165

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L D M +M  P DV++Y  L++ L + G    A    + M   +  P    ++ +++
Sbjct: 166 AVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMD 225

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK+     AL +   +   G  P LVTY  LI+GLC  GR + A  +L E+   G  P
Sbjct: 226 GLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRP 285

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +      ++    +  K      ++  M   G   D F Y ++I  +    ++ EA    
Sbjct: 286 DLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             MV+ G   DIV + +LI+ +CK+  +  A  LL+EM K GF  D  T T LI G C+A
Sbjct: 346 HLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQA 405

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G    A+     M+K G   NL+    I+D L K+  +  A+++ ++ME      +   Y
Sbjct: 406 GRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIY 465

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S ++  +C A +L +A +L  S    G++I       ++ GL   G   +A+ +
Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDL 519



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 156/334 (46%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P++VTY  LI   C F  +    ++L+ M + G+ PD+   N L+    +   +  +
Sbjct: 247 GVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQA 306

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             ++  M+  G  PDV++YNSL+H      K +EA RVF  M+     P    F  +++G
Sbjct: 307 KSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHG 366

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK++  + A+ +   + K GFVP++ T+  LI G C+AGR   A+ +   +   G  PN
Sbjct: 367 WCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPN 426

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T   I+    +       + +  AM++     +   Y  ++      G+L  A +   
Sbjct: 427 LQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFS 486

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   G+Q+++  Y  +I   CK+G L+ A  LL  ME+ G   +  T+ + + GL    
Sbjct: 487 SLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKK 546

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            I  +  +L  M   GF  +      I++ L  +
Sbjct: 547 EIARSIKYLTIMRDKGFSVDAATTEFIINYLSTN 580



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 1/295 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           ++LNI V  FCK  ++ +A+++I   I  G  PDV TYN LI  YC     +    + + 
Sbjct: 288 QMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G  PD+V + SLI G  ++  ++ ++ LL+EM +MG  PDV ++ +L+    Q G+
Sbjct: 348 MVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGR 407

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
           P  A  +F +M      P   T  ++L+GLCK      A+ + + ++K      +V Y+I
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSI 467

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G+C AG+L  A  +   L   G   N   YT ++K   +        ++L  M+  G
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENG 527

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-LYCKEG 301
              +   Y   +   +    +  +  Y+  M   G  +D  +   +IN L   EG
Sbjct: 528 CLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEG 582



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 46/329 (13%)

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N+  +G  KN   D AL +F+G+ +   +P +  + +L+  + +     TA  ++K +  
Sbjct: 47  NLCWSGKLKN--IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFS 104

Query: 211 S-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           S G   + IT   ++ C  R +    G  +L  M + G         T+I      G + 
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVA 164

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           +A    + M      LD+ +Y  LIN  CK G   AA   L +ME++ ++ +   ++ ++
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224

Query: 330 DGLCKAG------------NIKGARLH-----------------------LEYMNKIGFD 354
           DGLCK G            N KG R +                       L+ M K+G  
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            +L+  N +VD   K+GK+  A +V   M    E  D FTY+S++H  C   ++  A ++
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
               +  G    +     V   L H  C+
Sbjct: 345 FHLMVSRG----RLPDIVVFTSLIHGWCK 369


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 197/415 (47%), Gaps = 4/415 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVVTY  ++  YC     +    +L+ M   G+  +   Y S+IA       +S +L +
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRV 344

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L++M   G+  D   + +++      G    A R+F++M    L     T   ++NGLC+
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 A R+ + +   G   ++VTY +LI G CK G +  A  +  E+     APN +T
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT +     +    +   E+L  M  KG   + + Y ++I    K G L++A   M +M 
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G + D+ +Y TLI+  CK G+ + A+ +L EM  +G +    T+ +L++G C +G ++
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMV 395
           G +  LE+M +     N+  YN ++ +   D  +     +++ M  ++      TY+ ++
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
              CKA+ +  A       ++ G+R+  S+  A++  L       EA+    K+R
Sbjct: 645 KGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMR 699



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 189/406 (46%), Gaps = 48/406 (11%)

Query: 21  NRLEKAEAIIIDGIRLGVLPD--VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +RL   EAI +       LPD  V ++N+L+ A    +S            E    PDVV
Sbjct: 236 SRLPLDEAIAL----FRELPDKNVCSHNILLKA---LLSAGRLKDACQHFDEMSSPPDVV 288

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY +++ G      L  ++ LLDEM   G+  +   Y S++  L   G+  +A RV +DM
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
               +      F  +++G C       A R+F  +QK G   + VT+  LI GLC+AG L
Sbjct: 349 TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGEL 408

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A  +L+E+ D G   + +TYT ++                             GYC  
Sbjct: 409 KEADRVLQEMVDKGLDVDVVTYTVLID----------------------------GYC-- 438

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
                K G + EA     +MV   V  ++V+Y  L +  CK+G + AA  LL EM  +G 
Sbjct: 439 -----KRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           E + YT+  LI+GLCK GN++ A   +  M   G  +++  Y  ++D L K G+ D A N
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHN 553

Query: 379 VFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + + M    +K S  TY+ +++  C + R+    KLL   L+  VR
Sbjct: 554 MLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 162/314 (51%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A  L++A+ ++ + +  G+  DVVTY +LID YC+  +    + + N M    ++P+
Sbjct: 402 LCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPN 461

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +L  G  +   +  + +LL EM   G+  +V++YNSL++ L + G  ++A R+  
Sbjct: 462 VVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMT 521

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M          T+  +++ LCK+   D A  M + +   G  P + TYN+L+ G C +G
Sbjct: 522 EMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSG 581

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+   + +L+ + +    PN +TY ++MK    ++  K   EI   M  +    +   Y 
Sbjct: 582 RVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYN 641

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K   +KEA  + ++M+  G++L   SY+ LI L  K+ K   A +  D+M  +
Sbjct: 642 ILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNE 701

Query: 317 GFECDKYTHTILID 330
           G   +   ++  +D
Sbjct: 702 GLTAEPDVYSFYMD 715



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 172/370 (46%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C   ++  A  ++ D    GV  D V +  +I  +C      A   +   M++ G+
Sbjct: 329 IALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGL 388

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           + D VT+ +LI G  R   L  +  +L EM++ G+  DV +Y  L+    + G   EA R
Sbjct: 389 AADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFR 448

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           V  +M+   + P   T+  + +GLCK      A  +   +   G    + TYN LI GLC
Sbjct: 449 VHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLC 508

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K G L  A  I+ E+  +GH  +  TYTT++    ++ ++     +L  M  KG      
Sbjct: 509 KFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIA 568

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  ++  F   GR++     +E M+   V+ ++V+YN+L+  YC +  +++   +   M
Sbjct: 569 TYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM 628

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
             Q    ++ T+ ILI G CKA N+K A    + M + G      +Y+ ++  L K  K 
Sbjct: 629 HSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKF 688

Query: 374 DHAINVFESM 383
             A   F+ M
Sbjct: 689 SEARVFFDKM 698



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 184/397 (46%), Gaps = 8/397 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C    LE A  ++ +    G+  +   Y  +I   C          +L  M   G++ D
Sbjct: 297 YCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALD 356

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V + ++I+G      L+ +  L +EM + G+  D  ++ +L++ L + G+  EA+RV Q
Sbjct: 357 AVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQ 416

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L     T+ ++++G CK      A R+   +      P +VTY  L  GLCK G
Sbjct: 417 EMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQG 476

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            +R A  +L E+ + G   N  TY +++   C F N   +  + I++ M+  G+  D + 
Sbjct: 477 DVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGN--LEQAMRIMTEMEAAGHRTDVYT 534

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I    K G    A + +++M+  G++  I +YN L+N +C  G++E    LL+ M 
Sbjct: 535 YTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWML 594

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           ++    +  T+  L+   C   N+K      + M+      N   YN ++    K   + 
Sbjct: 595 EKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMK 654

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
            A+   + M  K     + +YS+++  L K K+   A
Sbjct: 655 EALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 17/315 (5%)

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           L+P   + N +L+ L      D A+ +FR L        + ++NIL+K L  AGRL+ A 
Sbjct: 224 LSPSPESCNAVLSRLP----LDEAIALFRELPDKN----VCSHNILLKALLSAGRLKDAC 275

Query: 203 WILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
               E+      P+ +TY T++   C R  + +  +++L  M  KG   +   Y +VIA 
Sbjct: 276 QHFDEMSS---PPDVVTYGTMVHGYCVRG-ELENAVKLLDEMAAKGLESNATVYTSVIAL 331

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               G++ +A   +E M   GV LD V + T+I+ +C +G L AA  L +EM+K+G   D
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
           + THT LI+GLC+AG +K A   L+ M   G D ++  Y  ++D   K G +  A  V  
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M       +  TY+++   LCK   + +A++LL      G+ +      ++++GL   G
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511

Query: 438 CRREAKKIQSKIRMA 452
              +A +I +++  A
Sbjct: 512 NLEQAMRIMTEMEAA 526



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 142/297 (47%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   + +A  +  + +   V P+VVTY  L D  C+     A   +L+ M   G+  +
Sbjct: 437 YCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN 496

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYNSLI G  +   L  ++ ++ EM   G   DV++Y +L+  L + G+ D A+ + Q
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQ 556

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P  AT+N+++NG C +   +   ++   + +    P +VTYN L+K  C   
Sbjct: 557 EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDK 616

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +++   I K +     APN  TY  ++K   + R  K  L     M  KG       Y 
Sbjct: 617 NMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYS 676

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +I    K  +  EA  + ++M  +G+  +   Y+  +++   E  LE+   L DE+
Sbjct: 677 ALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 4/227 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+    N  +   CK   LE+A  I+ +    G   DV TY  LID  C+   FD  + 
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHN 553

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           +L  M + GI P + TYN L+ G   +  +     LL+ MLE  + P+V +YNSLM  +C
Sbjct: 554 MLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC 613

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           + +  K      +++ M   ++ P   T+NI++ G CK R    AL   + + + G    
Sbjct: 614 IDKNMK--STTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLT 671

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
             +Y+ LI+ L K  +   AR    ++ + G       Y+  M   F
Sbjct: 672 ASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISF 718


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 199/453 (43%), Gaps = 44/453 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +   C+A  ++ A  ++ +  R G+ P VVTYN+L+DA C+    +  + +  RM E
Sbjct: 220 TVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVE 279

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKP 128
             + P +VT+  LI G  R         +L EM   GI P+   YN L+  HC  + G  
Sbjct: 280 GRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHC--REGHC 337

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA---------------------- 166
            EA R+F +M+   +     T+N++   LCK    ++A                      
Sbjct: 338 SEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV 397

Query: 167 --------------LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
                         LR+ R +      P        I+ LCK G+   A  I   +   G
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              N  T   ++    +    K   ++L AM   G  FD   Y  +I    K  +++EA 
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              + M+  G + D+ ++NT +  YC  GK+E    LLD+M+ +G + D  T+  +IDG 
Sbjct: 518 QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
           CKA ++  A  +L  + K G   N   YN ++   G++G I  AI V ++M+        
Sbjct: 578 CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP 637

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            TY+S+++ +C A  +  A ++   C+   + +
Sbjct: 638 ITYNSLMYWMCHAGLVEEAKEIFAQCILKNIEL 670



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 163/339 (48%), Gaps = 4/339 (1%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAI--IIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           F K +  ++  C+   CK  + E+A  I  ++ G  LGV  ++ T N LI   CQ  +  
Sbjct: 422 FLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV--NIATSNALIHGLCQGNNMK 479

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
               +L  M ++G+  D +TYN +I    + S +  ++ L D+M++ G  PD++++N+ +
Sbjct: 480 EATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFL 539

Query: 120 HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
                LGK ++   +   M    L P   T+  +++G CK +    A +    L K+G  
Sbjct: 540 RAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLR 599

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  V YN LI G  + G +  A  +L  +  +G  P  ITY ++M         +   EI
Sbjct: 600 PNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEI 659

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
            +    K       GY  +I  F KIG++ EA  Y ++M    ++ + ++Y TL+  YCK
Sbjct: 660 FAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCK 719

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
            G  E A+ L DEM   G   D  ++  LI G C+  ++
Sbjct: 720 CGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSL 758



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 206/484 (42%), Gaps = 75/484 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C++ R+E+A  +    +   + P +VT+ +LI+   +   F     +L  M  
Sbjct: 255 NVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEG 314

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P+ V YN LI    R    S +L L DEM+  GI   V +YN +   L + G+ + 
Sbjct: 315 FGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 374

Query: 131 ANRVFQDMICGDLT------------------------------------PCTATFNIML 154
           A ++  +M+   +T                                    P  A     +
Sbjct: 375 AEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACI 434

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             LCK    + A  ++  +   G    + T N LI GLC+   ++ A  +LK + DSG  
Sbjct: 435 QELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVE 494

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + ITY  +++ C +  K +  +++   M ++G+  D F + T + A+  +G++++    
Sbjct: 495 FDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHL 554

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++QM ++G++ DIV+Y T+I+ YCK   +  A   L E+ K G   +   +  LI G  +
Sbjct: 555 LDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGR 614

Query: 335 AGNIKGARLHLEYMNKIGFDS-------------------------------NLE----A 359
            G+I  A   L+ M   G                                  N+E     
Sbjct: 615 NGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIG 674

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  I+    K GKID A+  F+ M  +D      TY+++++  CK      A KL    +
Sbjct: 675 YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV 734

Query: 416 KSGV 419
            SG+
Sbjct: 735 SSGI 738



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 195/470 (41%), Gaps = 75/470 (15%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
             I +    +  R  + +A++ +    G+ P+ V YN LI  +C+         + + M 
Sbjct: 289 FGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMV 348

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC-LFQLGKP 128
             GI   VVTYN +     +   +  +  +LDEML  G+      +NS++   L   G+ 
Sbjct: 349 SKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRL 408

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D   R+ ++M+   L P  A     +  LCK    + A  ++  +   G    + T N L
Sbjct: 409 DVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNAL 468

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC+   ++ A  +LK + DSG   + ITY  +++ C +  K +  +++   M ++G+
Sbjct: 469 IHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGF 528

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK--------- 299
             D F + T + A+  +G++++    ++QM ++G++ DIV+Y T+I+ YCK         
Sbjct: 529 KPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANK 588

Query: 300 --------------------------EGKLEAAYLLLDEMEKQGFECDKYTH-------- 325
                                      G +  A  +LD M+  G +    T+        
Sbjct: 589 YLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMC 648

Query: 326 ---------------------------TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
                                      TI+I G CK G I  A ++ + M+      N  
Sbjct: 649 HAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKM 708

Query: 359 AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 404
            Y  ++    K G  + A  +F+ M     V D+ +Y++++   C+   L
Sbjct: 709 TYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSL 758



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 6/304 (1%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+  ++ T N+LI G  + + +  +  +L  M++ G+  D  +YN ++    +  K +EA
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++  DMI     P   TFN  L   C     ++ L +   ++  G  P++VTY  +I G
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CKA  +  A   L EL  +G  PNA+ Y  ++    RN      + +L  MK  G    
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y +++      G ++EA +   Q +   ++L ++ Y  +I  +CK GK++ A +   
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN------CIVD 365
           EM  +    +K T+T L+   CK GN + A    + M   G   +  +YN      C VD
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVD 756

Query: 366 RLGK 369
            L K
Sbjct: 757 SLDK 760



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CKA+++E+A  +  D I+ G  PD+ T+N  + AYC     +    +L++M+ 
Sbjct: 501 NIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKS 560

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD+VTY ++I G  +   +  +   L E+++ G+ P+   YN+L+    + G   +
Sbjct: 561 EGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISD 620

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V   M    + P   T+N ++  +C     + A  +F           ++ Y I+I+
Sbjct: 621 AIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQ 680

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A    KE+      PN +TYTT+M                          
Sbjct: 681 GFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLM-------------------------- 714

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             + YC       K G  +EA    ++MV+ G+  D VSYNTLI+  C+   L+
Sbjct: 715 --YAYC-------KCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLD 759



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 46/345 (13%)

Query: 146 CTATFNIMLNGLCKNRYTDNALR----MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           CTAT ++++   C N     +L      F  L   G  P + T NIL++ L   G+L  A
Sbjct: 141 CTATADLLVRA-CLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLA 199

Query: 202 RWILKELGD-SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           R +  E+ D +  AP+  TYT ++K   R  +      +L+ ++R G       Y  ++ 
Sbjct: 200 RKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMD 259

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVS------------------------------- 289
           A  + GR++EA     +MV   ++  IV+                               
Sbjct: 260 ALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITP 319

Query: 290 ----YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
               YN LI  +C+EG    A  L DEM  +G +    T+ ++   LCK G ++ A   L
Sbjct: 320 NEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQIL 379

Query: 346 EYMNKIGFDSNLEAYNCIVD-RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           + M   G   +   +N +V   L   G++D  + +   M  +    +    ++ +  LCK
Sbjct: 380 DEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCK 439

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +   A+++    L  G+ +  +   A++ GL      +EA K+
Sbjct: 440 RGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKV 484


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 210/427 (49%), Gaps = 9/427 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--FVSFDAGYTIL 65
           +L N  +    + N++  A ++  D    G  P+V +Y++L+ AY     +     + +L
Sbjct: 175 QLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELL 234

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M   G+ P+  TY + + G +R   ++ + + L  + + G P + + +N+++    + 
Sbjct: 235 SEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCRE 294

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  EA  VF  M  G L P T +++I+++GLCK         +   + ++G  P LV+Y
Sbjct: 295 GQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSY 354

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + L+ GLC+AG++  A  + + L + G   + I Y+ I+  C ++   ++  ++ + M  
Sbjct: 355 SSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVH 414

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
             +  D + Y ++I AF +   L +A    E M+  GV  ++V+   L++ + KE  ++ 
Sbjct: 415 HNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDE 474

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A+L L ++ + G   +   + ++I+GLCK             M K G+  +   Y+ I+D
Sbjct: 475 AFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIID 534

Query: 366 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV-- 419
              K  K+  A  +F  M       + FTY+S+++ LC   RLP    L    +  G+  
Sbjct: 535 SFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTP 594

Query: 420 -RILKSA 425
            RIL ++
Sbjct: 595 DRILYTS 601



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 184/380 (48%), Gaps = 8/380 (2%)

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNS--LLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           ++ + M+ +G SP+V +Y+ L++  T      L+ + +LL EM   G+ P+  +Y + ++
Sbjct: 195 SLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLY 254

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPC-TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
            L +  +   A    Q M+C    PC T  FN ++ G C+      A+ +F  ++K G V
Sbjct: 255 GLSRTRQVASAWNFLQ-MLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLV 313

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P+  +Y+IL+ GLCK G + T   +L E+  +G AP  ++Y++++    R  K +L  E+
Sbjct: 314 PDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFEL 373

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
              ++ +G+  D   Y  ++    +   ++   D    MV      D  +Y +LI  +C+
Sbjct: 374 FRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCR 433

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
              L  A  + + M   G   +  T TIL+DG  K   I  A L L  + + G   NL  
Sbjct: 434 HRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCM 493

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  I++ L K  K DH   +F  M     V D+  YS ++ +  KA +LP A +L    L
Sbjct: 494 YRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKML 553

Query: 416 KSGVRILKSAQKAVVDGLRH 435
             G +       ++++GL H
Sbjct: 554 DEGTKPNVFTYTSLINGLCH 573



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 183/409 (44%), Gaps = 18/409 (4%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   +I V   CK   +     ++++  R G+ P +V+Y+ L+   C+    +  + +  
Sbjct: 316 THSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFR 375

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           R+ E G   D + Y+ ++ G  ++  +    DL ++M+     PD ++Y SL++   +  
Sbjct: 376 RLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHR 435

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  VF+ M+   ++P   T  I+++G  K R  D A      +++ G VP L  Y 
Sbjct: 436 NLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYR 495

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           ++I GLCK  +      I  ++   G+ P+ + Y+ I+    +  K      +   M  +
Sbjct: 496 VIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDE 555

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + F Y ++I       RL E     + M+ +G+  D + Y +LI  YCK   ++AA
Sbjct: 556 GTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAA 615

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +   M K G   D + +T LI G  K   + GA+  +E M   G   ++  Y  ++  
Sbjct: 616 LEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIG 675

Query: 367 LGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
             K G            E K + TY+SM+    +A   P A    LSC+
Sbjct: 676 YFKIGD-----------ERKANMTYNSML----QAGITPDAK---LSCI 706



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 4/320 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           +LN C    C+   +E    +  D +    +PD   Y  LI A+C+  +      +   M
Sbjct: 392 ILNGC----CQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELM 447

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            ++G+SP+VVT   L+ G  +  ++  +   L ++ + GI P++  Y  +++ L ++ K 
Sbjct: 448 LDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKS 507

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D    +F DMI     P T  ++I+++   K      A R+F  +   G  P + TY  L
Sbjct: 508 DHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSL 567

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC   RL     + K +   G  P+ I YT+++ C  +    K  LEI   M + G 
Sbjct: 568 INGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGL 627

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D F Y  +I  F K+  +  A   ME+M   G+   +V+Y  LI  Y K G    A +
Sbjct: 628 SADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANM 687

Query: 309 LLDEMEKQGFECDKYTHTIL 328
             + M + G   D     IL
Sbjct: 688 TYNSMLQAGITPDAKLSCIL 707



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 43/332 (12%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           ++AL  +   +K G   EL   N L+K L +  ++  AR +  ++  SG +PN  +Y+ +
Sbjct: 158 EDALLTYTEAKKVGV--ELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVL 215

Query: 224 MKCCFRNRKYKL--GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           M       +  L    E+LS M+ KG   +   Y T +    +  ++  A ++++ +   
Sbjct: 216 MSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQR 275

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G   +   +N +I  +C+EG+++ A  + D M+K G   D ++++IL+DGLCK G++   
Sbjct: 276 GNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTG 335

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----------------- 384
              L  M + G    L +Y+ ++  L + GK++ A  +F  +E                 
Sbjct: 336 YDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNG 395

Query: 385 ----------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
                                 V D++ Y+S+++  C+ + L  A  +    L SGV   
Sbjct: 396 CCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPN 455

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                 +VDG        EA     K+R   I
Sbjct: 456 VVTCTILVDGFGKERMIDEAFLFLHKVRQFGI 487


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 165/317 (52%), Gaps = 5/317 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV Y+ +ID  C+    +  Y + + M    I P+V+TYN+LI        L  +  L
Sbjct: 148 PNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSL 207

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L EM+   I PDV++++ L+  L + GK   A ++F  M+   + P   ++NIM+NGLCK
Sbjct: 208 LHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCK 265

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +  D A+ + R +     VP+ VTYN LI GLCK+GR+ +A  ++ E+   G   + +T
Sbjct: 266 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 325

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT+++    +N+       +   MK +G     + Y  +I    K GRLK A +  + ++
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNI 338
             G  +D+ +Y  +I+  CKEG  + A  +  +ME  G   +  T  I+I  L  K  N 
Sbjct: 386 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 445

Query: 339 KGARLHLEYMNK--IGF 353
           K  +L  E + K  +GF
Sbjct: 446 KAEKLLHEMIAKGLLGF 462



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 187/376 (49%), Gaps = 8/376 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  ++VT ++LI+ +C        +++L ++ + G  P+ +T+ +L+ G      +   
Sbjct: 40  GIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKL 99

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L   D+++      +  SY +L++ L + G+   A ++ + +      P    ++ +++G
Sbjct: 100 LHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDG 159

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK++  + A  ++  +      P ++TYN LI   C AG+L  A  +L E+      P+
Sbjct: 160 LCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPD 219

Query: 217 AITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
             T++ ++   C   +  K   +I  AM + G   + + Y  +I    K  R+ EA + +
Sbjct: 220 VYTFSILIDALCKEGKNAK---QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 276

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+   +  D V+YN+LI+  CK G++ +A  L++EM  +G   D  T+T L+D LCK 
Sbjct: 277 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 336

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
            N+  A      M + G    +  Y  ++D L K G++ +A  +F+ + VK    D +TY
Sbjct: 337 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 396

Query: 392 SSMVHNLCKAKRLPSA 407
           + M+  LCK      A
Sbjct: 397 TVMISGLCKEGMFDEA 412



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 195/414 (47%), Gaps = 8/414 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           ++ +N ++ +  +   +    ++  +M   GI  ++VT + LI        ++ S  LL 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           ++L++G  P+  ++ +LM  L   G+  +       ++         ++  +LNGLCK  
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            T  A+++ R ++     P +V Y+ +I GLCK   +  A  +  E+      PN ITY 
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 222 TIMKCCFRNRKYKLG-LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T++ C F      +G   +L  M  K    D + +  +I A  K G  K A      MV 
Sbjct: 190 TLI-CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQ 246

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            GV  ++ SYN +IN  CK  +++ A  LL EM  +    D  T+  LIDGLCK+G I  
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 306

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A   +  M+  G  +++  Y  ++D L K+  +D A  +F  M+ +      +TY++++ 
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            LCK  RL +A +L    L  G  I       ++ GL   G   EA  I+SK+ 
Sbjct: 367 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 172/345 (49%), Gaps = 4/345 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           V+Y  L++  C+         +L  + +    P+VV Y+++I G  ++ L++ + DL  E
Sbjct: 116 VSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSE 175

Query: 103 MLEMGIPPDVWSYNSLMHCLFQL-GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           M    I P+V +YN+L+ C F L G+   A  +  +MI  ++ P   TF+I+++ LCK  
Sbjct: 176 MDAREIFPNVITYNTLI-CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE- 233

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
              NA ++F  + + G  P + +YNI+I GLCK  R+  A  +L+E+      P+ +TY 
Sbjct: 234 -GKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 292

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           +++    ++ +    L +++ M  +G   D   Y +++ A  K   L +AT    +M   
Sbjct: 293 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 352

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+Q  + +Y  LI+  CK G+L+ A  L   +  +G   D +T+T++I GLCK G    A
Sbjct: 353 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 412

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
                 M   G   N   +  I+  L +  + D A  +   M  K
Sbjct: 413 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 2/238 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            +I +   CK  +   A+ I    +++GV P+V +YN++I+  C+    D    +L  M 
Sbjct: 223 FSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 280

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
              + PD VTYNSLI G  ++  ++ +L+L++EM   G P DV +Y SL+  L +    D
Sbjct: 281 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 340

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +F  M    + P   T+  +++GLCK     NA  +F+ L   G   ++ TY ++I
Sbjct: 341 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 400

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
            GLCK G    A  I  ++ D+G  PNA+T+  I++  F   +     ++L  M  KG
Sbjct: 401 SGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 142/281 (50%), Gaps = 2/281 (0%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           + P+V+TYN LI A+C        +++L+ M    I+PDV T++ LI    +      + 
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAK 238

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +   M++MG+ P+V+SYN +++ L +  + DEA  + ++M+  ++ P T T+N +++GL
Sbjct: 239 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+    +AL +   +   G   ++VTY  L+  LCK   L  A  +  ++ + G  P  
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TYT ++    +  + K   E+   +  KG   D + Y  +I+   K G   EA     +
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 418

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           M  +G   + V++  +I    ++ + + A  LL EM  +G 
Sbjct: 419 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 137/273 (50%), Gaps = 2/273 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +C FC A +L  A +++ + I   + PDV T+++LIDA C+         I + M +
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK--EGKNAKQIFHAMVQ 246

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++P+V +YN +I G  +   +  +++LL EML   + PD  +YNSL+  L + G+   
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 306

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +M          T+  +L+ LCKN+  D A  +F  +++ G  P + TY  LI 
Sbjct: 307 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 366

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK GRL+ A+ + + L   G   +  TYT ++    +   +   L I S M+  G   
Sbjct: 367 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 426

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +   +  +I +  +     +A   + +M+  G+
Sbjct: 427 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 6/237 (2%)

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           H    I +  I+    + + Y   + +   M  KG   +      +I  F  +G++  + 
Sbjct: 6   HTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             + +++  G   + +++ TL+   C +G+++      D++  Q F+ ++ ++  L++GL
Sbjct: 66  SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGL 125

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF--- 389
           CK G  + A   L  +       N+  Y+ I+D L KD  ++ A +++  M+ ++ F   
Sbjct: 126 CKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV 185

Query: 390 -TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            TY++++   C A +L  A  LL   +   +         ++D L   G  + AK+I
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQI 240


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 185/342 (54%), Gaps = 17/342 (4%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 166
           ++ S N+L   L + G+ +E  R  + M+      D+ PCT+    ++ G CK   T  A
Sbjct: 84  EIESNNNLSK-LVRNGELEEGFRFLESMVYRGDIPDIIPCTS----LIRGFCKIGKTRKA 138

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
            R+   ++  G VP+++TYN+LI G+C  GR   A  +L ++   G +P+ +T+  ++  
Sbjct: 139 TRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILIN- 197

Query: 227 CFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            F  RK  LG  +++L  M + G T +   Y  ++  F K  +++ A +Y+ +M + G  
Sbjct: 198 -FLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCY 256

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            DIV+YNTL+   CK+GK++AA  LL+++  +G      T+  +IDGL K G    A   
Sbjct: 257 PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKL 316

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 400
           L+ M   G   ++  Y+ +V  L ++GK+D AI  F  +EV     ++ TY++++  LCK
Sbjct: 317 LDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK 376

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           A++   A   L   ++ G +  +++   +++GL + G  +EA
Sbjct: 377 ARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEA 418



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 166/336 (49%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
            + G+  L  M   G  PD++   SLI G  +      +  +++ + + G  PDV +YN 
Sbjct: 100 LEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNV 159

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L+  +   G+  +A ++  DM+    +P   TFNI++N LC+      A+ +   + KHG
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P  ++YN L+ G CK  ++  A   L ++   G  P+ +TY T++    ++ K    +
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAV 279

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           E+L+ +  KG +     Y TVI    K+G+  +A   +++M   G++ DI++Y++L+   
Sbjct: 280 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGL 339

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
            +EGK++ A     ++E  G + +  T+  ++ GLCKA     A   L YM + G     
Sbjct: 340 SREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTE 399

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
            +Y  +++ L  +G    A+ +   + ++     SS
Sbjct: 400 ASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSS 435



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 3/315 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +PD++    LI  +C+         I+  + ++G  PDV+TYN LI+G         +
Sbjct: 114 GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA 173

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             LL +M+  G  P V ++N L++ L + G    A  V + M     TP + ++N +L+G
Sbjct: 174 EKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHG 233

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK +  + A+     +   G  P++VTYN L+  LCK G++  A  +L +L   G +P 
Sbjct: 234 FCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPV 293

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITY T++    +  K     ++L  M+ KG   D   Y +++    + G++ EA  +  
Sbjct: 294 LITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFH 353

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   GV+ + ++YN ++   CK  K + A   L  M ++G +  + ++TILI+GL   G
Sbjct: 354 DLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEG 413

Query: 337 NIKGARLHLEYMNKI 351
             K A   LE +N++
Sbjct: 414 LAKEA---LELLNEL 425



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 139/297 (46%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +  KA  I+      G +PDV+TYN+LI   C    +     +L  M   G SP 
Sbjct: 129 FCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPS 188

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+N LI    R  LL  ++D+L++M + G  P+  SYN L+H   +  K + A     
Sbjct: 189 VVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLG 248

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M      P   T+N +L  LCK+   D A+ +   L   G  P L+TYN +I GL K G
Sbjct: 249 KMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 308

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  +L E+   G  P+ ITY++++    R  K    ++    ++  G   +   Y 
Sbjct: 309 KTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYN 368

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            ++    K  +   A D++  MV  G +    SY  LI     EG  + A  LL+E+
Sbjct: 369 AIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 137/273 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   R   AE ++ D +R G  P VVT+N+LI+  C+         +L +M +
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ ++YN L+ G  +   +  +++ L +M   G  PD+ +YN+L+  L + GK D 
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   +     +P   T+N +++GL K   TD A ++   ++  G  P+++TY+ L+ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL + G++  A     +L   G  PNAITY  IM    + RK    ++ L+ M ++G   
Sbjct: 338 GLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKP 397

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
               Y  +I      G  KEA + + ++   GV
Sbjct: 398 TEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 39/298 (13%)

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N  L+ L +N   +   R    +   G +P+++    LI+G CK G+ R A  I++ + D
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG  P+ ITY  ++                             G C+        GR  +
Sbjct: 148 SGAVPDVITYNVLIS----------------------------GMCST-------GRWMD 172

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  MV  G    +V++N LIN  C++G L  A  +L++M K G   +  ++  L+ 
Sbjct: 173 AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLH 232

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-- 388
           G CK   ++ A  +L  M   G   ++  YN ++  L KDGK+D A+ +   +  K    
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSP 292

Query: 389 --FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
              TY++++  L K  +   A+KLL      G++       ++V GL   G   EA K
Sbjct: 293 VLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           RN + + G   L +M  +G   D     ++I  F KIG+ ++AT  ME +   G   D++
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YN LI+  C  G+   A  LL +M ++G      T  ILI+ LC+ G +  A   LE M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
            K G   N  +YN ++    K+ K++ AI     M  +    D  TY++++  LCK  ++
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +A +LL      G   +      V+DGL   G   +A K+  ++R
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMR 321



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 7/185 (3%)

Query: 2   FGKLSTR-------LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ 54
            GK+++R         N  +   CK  +++ A  ++      G  P ++TYN +ID   +
Sbjct: 247 LGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 306

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
               D    +L+ MR  G+ PD++TY+SL+ G +R   +  ++    ++  +G+ P+  +
Sbjct: 307 VGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAIT 366

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           YN++M  L +  K D A      M+     P  A++ I++ GL        AL +   L 
Sbjct: 367 YNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELC 426

Query: 175 KHGFV 179
             G V
Sbjct: 427 LRGVV 431


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 23/406 (5%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            +RM E    P    YN+++     + ++  +L L + M+  G  P+  +YN LM  L +
Sbjct: 160 FSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCK 219

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   +A ++F +M+   + P    + ++L+ LC     D A+++   ++  G +P+ VT
Sbjct: 220 QGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVT 279

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN  + GLCK GR+  A   L  L D G A     Y+ ++   F+ R++  G      M 
Sbjct: 280 YNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTML 339

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +  + D   Y  +I    + GR+++A  +++ M   G   D   YNT++ + C  G LE
Sbjct: 340 ERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLE 399

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ L  EM +     D  T TI+I GLCK G +  A    + M + G D  +  YN ++
Sbjct: 400 RAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI 459

Query: 365 DRLGKDGKIDHAINVFESME-----------------VKDSFTYSSMVHNLCKAKRLPSA 407
           D   ++G+++ A  +F  ME                 V DS +   +VH++C++ ++  A
Sbjct: 460 DGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKA 519

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            KLL S + SGV         +++GL    C+  A+ +   +R+ K
Sbjct: 520 YKLLRSIIDSGVVPDVVTYNTLINGL----CK--ARNLDGAVRLFK 559



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 191/412 (46%), Gaps = 19/412 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P    YN ++ A            + NRM  AG +P+  TYN L+ G  +  +   +L +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEML+ GI P+V  Y  L+  L   GK DEA ++   M      P   T+N  L+GLCK
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               + A +    LQ  GF   L  Y+ LI GL +A R        K + +   +P+ + 
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT +++ C    + +  L  L  MK+KG+  D F Y TV+      G L+ A     +M+
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            + + LD  +   +I   CK G ++ A  + DEM + G +    T+  LIDG  + G ++
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 340 GARLHLEYMNKIGFDSNL--------------EAYNCIVDRLGKDGKIDHAI----NVFE 381
            AR+    M ++G + +L              E+   +V  + + G++  A     ++ +
Sbjct: 470 EARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           S  V D  TY+++++ LCKA+ L  A +L       G+   +     ++DGL
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 183/412 (44%), Gaps = 61/412 (14%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNM------------------ 47
           + ++  + + + C A ++++A  ++      G LPD VTYN                   
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300

Query: 48  -----------------LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN 90
                            LID   Q   FD G+     M E  ISPDVV Y  +I G    
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  +L  LD M + G  PD + YN+++  L   G  + A+ +  +M+  +L   + T 
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
            IM+ GLCK    D A+++F  + +HG  P ++TYN LI G  + GRL  AR +  ++ +
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-E 479

Query: 211 SGHAPNAITYTTI--MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
            G+ P+     T+   + C      KL                       +    + G++
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKL-----------------------VHDMCQSGQV 516

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +A   +  ++  GV  D+V+YNTLIN  CK   L+ A  L  E++ +G   D+ T+  L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           IDGL +A     A +  + + + G   +L  YN ++  L +  K+  AIN++
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 203/460 (44%), Gaps = 25/460 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK      A  +  + +  G++P+V  Y +L+ + C     D    +L  M++
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD VTYN+ ++G  +   ++ +   L  + + G    +  Y+ L+  LFQ  + DE
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
               ++ M+  +++P    + IM+ G  +    ++AL     ++K GFVP+   YN ++K
Sbjct: 331 GFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLK 390

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK-YKLGLEILSAMKRKGYT 249
            LC  G L  A  +  E+  +    ++ T  TIM C    R      ++I   M   G  
Sbjct: 391 VLCDHGDLERAHTLRSEMLQNNLVLDSTT-QTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQM-----------VTDGVQL--DIVSYNTLINL 296
                Y  +I  F + GRL+EA     +M           +T G     D  S   L++ 
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHD 509

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
            C+ G++  AY LL  +   G   D  T+  LI+GLCKA N+ GA    + +   G   +
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569

Query: 357 LEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              Y  ++D L +  + + A+    N+ +S        Y+SM+ +LC+ K+L  A  L L
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629

Query: 413 SCLKSGV------RILKSAQKAVVDGLRHSGCRREAKKIQ 446
             L           +L +A K + DG    G R   K  Q
Sbjct: 630 DYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQ 669



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 195/432 (45%), Gaps = 23/432 (5%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+  TYN+L+D  C+         + + M + GI P+V  Y  L++       +  +
Sbjct: 202 GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEA 261

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LL  M + G  PD  +YN+ +  L ++G+ +EA +    +  G        ++ +++G
Sbjct: 262 VQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDG 321

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L + R  D     ++ + +    P++V Y I+I+G  +AGR+  A   L  +   G  P+
Sbjct: 322 LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD 381

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y T++K    +   +    + S M +     D      +I    K G + EA    +
Sbjct: 382 TFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFD 441

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE-------------CDKY 323
           +M   G    +++YN LI+ + +EG+LE A +L  +ME                  CD  
Sbjct: 442 EMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSE 501

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           +   L+  +C++G +  A   L  +   G   ++  YN +++ L K   +D A+ +F+ +
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           ++K    D  TY +++  L +A R   A  L  + L+SG     S   ++ + +  S CR
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSG----SSPSLSIYNSMMRSLCR 617

Query: 440 REAKKIQSKIRM 451
              KK+   I +
Sbjct: 618 --MKKLSQAINL 627



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 174/380 (45%), Gaps = 22/380 (5%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +A R+E A + +    + G +PD   YN ++   C     +  +T+ + M +  +  D  
Sbjct: 359 EAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDST 418

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T   +I G  +  L+  ++ + DEM E G  P V +YN+L+   ++ G+ +EA  +F  M
Sbjct: 419 TQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM 478

Query: 139 ICGDLTPC--------------TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             G+  P               + +   +++ +C++     A ++ R +   G VP++VT
Sbjct: 479 EMGN-NPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI GLCKA  L  A  + KEL   G +P+ ITY T++    R  +    + +   + 
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEAT----DYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + G +     Y +++ +  ++ +L +A     DY+ +     V+ ++++     +   ++
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLAN---AHKEIED 654

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G L+     L +++++        +TI + GLC+      A      + + G D      
Sbjct: 655 GSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 361 NCIVDRLGKDGKIDHAINVF 380
             +++ L  D  ++ A+++ 
Sbjct: 715 ALLINYLCWDRNLNAAVDIM 734


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 199/420 (47%), Gaps = 5/420 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L  R+LN  +        ++ AE +  + +   V+PD  +Y +++  YC+          
Sbjct: 191 LKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRW 250

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M E G + D  T   +I+  +    ++ +     + ++MG+ P++ +++SL++ L +
Sbjct: 251 LKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCK 310

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELV 183
           +G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F  L +   + P + 
Sbjct: 311 IGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVY 370

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  +I G CK  +L  A  +L  + + G  PN  TYT ++    +   +    E++  M
Sbjct: 371 TYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM 430

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            ++G+T + F Y  +I    K GR  EA   + + +  G+  D V+Y  LI+ +C++   
Sbjct: 431 GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A  +   M K G + D +T+ +LI   C+   ++ +    E    +G     E Y  +
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +    +DG I  AI  F  M       DS TY +++  LC   +L  A +L  + + +G+
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 191/435 (43%), Gaps = 9/435 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T ++   V +F +  +L++A  ++I+    G++      N +ID        D    + 
Sbjct: 157 ATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVF 216

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M +  + PD  +Y  ++ G  R   +S     L +M+E G   D  +   ++    + 
Sbjct: 217 DEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK 276

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G  + A   F+  +   L P    F+ ++NGLCK      A  M   + + G+ P + T+
Sbjct: 277 GFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTH 336

Query: 186 NILIKGLCKAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
             LI GLCK G    A R  LK +    + PN  TYT ++    +  K      +L  MK
Sbjct: 337 TALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMK 396

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   +   Y  +I    K G    A + M+ M  +G   +I +YN +I+  CK+G+  
Sbjct: 397 EQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFP 456

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            AY LL    K G   DK T+TILI   C+  + K A      M K+G   ++  YN ++
Sbjct: 457 EAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLI 516

Query: 365 DRLGKDGKIDHAINVFES------MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
               +  K++ +  +FE       +  K+  TY+SM+   C+   + SA K        G
Sbjct: 517 ATFCRQKKVEESEKLFEEAVGLGLLPTKE--TYTSMICGYCRDGHISSAIKFFHKMRDYG 574

Query: 419 VRILKSAQKAVVDGL 433
            +       A++ GL
Sbjct: 575 CKPDSITYGALISGL 589



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 203/455 (44%), Gaps = 34/455 (7%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIR----LGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           RL  +C  TF   + L++A  ++   +R    +G L + V  NM+I+             
Sbjct: 139 RLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEAV--NMVIE------------- 183

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               M+  G+       N +I  A     +  +  + DEML+  + PD  SY  ++    
Sbjct: 184 ----MQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYC 239

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+  + +R  +DMI        AT  +M++   +  + + A   F+   + G  P L+
Sbjct: 240 RMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLI 299

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEI 239
            ++ LI GLCK G ++ A  +L+E+   G  PN  T+T ++    K  +  + ++L L++
Sbjct: 300 NFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 359

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           +   +   Y  + + Y  +I  + K  +L  A   + +M   G+  +  +Y  LI+ +CK
Sbjct: 360 V---RSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCK 416

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G    AY L+D M K+GF  + +T+  +IDGLCK G    A   L    K G  ++   
Sbjct: 417 AGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVT 476

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           Y  ++    +      A+ +F  M       D  TY+ ++   C+ K++  + KL    +
Sbjct: 477 YTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAV 536

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
             G+   K    +++ G    G    A K   K+R
Sbjct: 537 GLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMR 571



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 155/330 (46%), Gaps = 4/330 (1%)

Query: 18  CKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           CK    EKA  + +  +R     P+V TY  +I+ YC+    +    +L RM+E G+ P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY  LI G  +      + +L+D M + G  P++++YN+++  L + G+  EA ++ +
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
             +   L     T+ I+++  C+      AL +F  + K G  P++ TYN+LI   C+  
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  +  + +E    G  P   TYT+++    R+      ++    M+  G   D   Y 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I+      +L EA    E M+ +G+    V+  TL   YCK+G    A ++L+ +EK+
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            +     T   LI  LC    +  A L   
Sbjct: 644 LW---IRTVNTLIRKLCSEKKVGVAALFFH 670



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 3/308 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  +L +AE ++I     G++P+  TY  LID +C+  +F   Y +++ M + G +P+
Sbjct: 379 YCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPN 438

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN++I G  +      +  LL   L+ G+  D  +Y  L+    +     +A  +F 
Sbjct: 439 IFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFS 498

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   T+N+++   C+ +  + + ++F      G +P   TY  +I G C+ G
Sbjct: 499 RMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDG 558

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            + +A     ++ D G  P++ITY  ++       K     ++   M   G +       
Sbjct: 559 HISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRV 618

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+   + K G    A   +E++     +L I + NTLI   C E K+  A L   ++  +
Sbjct: 619 TLAYEYCKQGDSATAMIILERLEK---KLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDK 675

Query: 317 GFECDKYT 324
               D+ T
Sbjct: 676 DLNVDRIT 683



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 3/224 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+    ++A AI     ++G+ PD+ TYN+LI  +C+    +    +       
Sbjct: 479 ILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGL 538

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+ P   TY S+I G  R+  +S ++    +M + G  PD  +Y +L+  L    K DEA
Sbjct: 539 GLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEA 598

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++++ MI   L+PC  T   +    CK   +  A+ +   L+K  ++    T N LI+ 
Sbjct: 599 CQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIR---TVNTLIRK 655

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
           LC   ++  A     +L D     + IT       C+ + K+ L
Sbjct: 656 LCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFAL 699


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 9/368 (2%)

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
           +I+ Y +  S +    +  R+ E G  P V  YN L+      +       L   M + G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P+V++YN L+  L +  + D A+++F +M      P   T+  M++ LCK    D+A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA- 233

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
           R   G     F P +  YN LI G+CK GR+  A  +L E+ D+G  PN ++Y+ I+   
Sbjct: 234 RELAGR----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
             +   +L   + + M  +G   +   +  +I      G+L EA D  + M+ DG + ++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           V+YNTLI+  C  G LE A  + D+M++ G   +  T++ILIDG  K+G++ GA      
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
           M   G   N+  Y C+VD L K+   D A ++ E M ++    ++ T+++ +  LC   R
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469

Query: 404 LPSASKLL 411
           +  A KLL
Sbjct: 470 VEWAMKLL 477



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 182/410 (44%), Gaps = 40/410 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---------- 53
           K S  + N  +   CK  R+E A  ++ + +  GV P+VV+Y+ +I++ C          
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 54  ---------------QFVSFDAGYTILNRMREA----------GISPDVVTYNSLIAGAT 88
                           F     G  +  ++ EA          G  P+VV YN+LI G  
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
            N  L  +L + D+M   G  P+V +Y+ L+    + G    A+  +  MI     P   
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+  M++ LCKN   D A  +   +   G  P  +T+N  IKGLC  GR+  A  +L+ +
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  PN  TY  ++   FR  KY+    +   ++ +    +   Y TV+  F + G +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDKYTHTI 327
            EA     + +  G   D ++YNT+I+ YCK+GK++ A  L++ +   + +  D  T+T 
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN----CIVDRLGKDGKI 373
           LI G C   NI+ A   L+     G   N   +N    C  D LG  G I
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPI 650



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 214/455 (47%), Gaps = 18/455 (3%)

Query: 2   FG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG K + R+ N  +      N+ +    +  +  + G++P+V TYN+L+ A C+    DA
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSL 118
            + +   M   G  PD VTY ++++         C    +D+  E+     P V  YN+L
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSL-------CKAGKIDDARELAGRFKPSVPVYNAL 250

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +  + + G+ + A ++  +M+   + P   +++ ++N LC +   + A  +F  +   G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
              + T+  LIKG    G+L  A  + K +   G  PN + Y T++     N   +  L+
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+R G   +   Y  +I  F K G L  A++   +M++ G + ++V+Y  ++++ C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K    + A  L+++M  +G   +  T    I GLC  G ++ A   LE M   G   N+ 
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++D L +  K + A  +F+ +E +    +  TY+++++   +A  +  A +L    
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           L  G     +      + + H+ C++   KI +++
Sbjct: 551 LVRGT----APDSITYNTMIHAYCKQGKVKIAAQL 581



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 185/405 (45%), Gaps = 9/405 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK +R++ A  + ++    G  PD VTY  ++ + C+    D    +  R + 
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK- 241

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P V  YN+LI G  +   +  ++ LL EM++ G+ P+V SY+ +++ L   G  + 
Sbjct: 242 ----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M          TF  ++ G         AL +++ + + G  P +V YN LI 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G L  A  +  ++  SG  PN  TY+ ++    ++       E  + M   G   
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  ++    K     +A   +E+M  +G   + +++NT I   C  G++E A  LL
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           + M+  G   +  T+  L+D L +    + A    + +       NL  YN ++    + 
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           G +  A+ +F    V+    DS TY++M+H  CK  ++  A++L+
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 36/267 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K+  L  A       I  G  P+VVTY  ++D  C+   FD   +++ +M   G +P+
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +T+N+ I G   N  +  ++ LL+ M   G  P++ +YN L+  LF++ K +EA  +FQ
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQ--------------KHG 177
           ++   +L P   T+N +L G  +      AL++F     RG                K G
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573

Query: 178 FV-----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            V                 P+++TY  LI G C    +  A   L +  + G  PN  T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKG 247
             +++C F +  +   + IL  + RKG
Sbjct: 634 NALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 205/423 (48%), Gaps = 10/423 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLP---DVVTYNMLIDAYCQFVSFDAG 61
           LS  LL+  +  +  AN+   A  +  + +         DV TYN L+   C     D  
Sbjct: 97  LSKPLLDTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEA 156

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMH 120
             + + M    + PDVVTYN+LI G  +    +    LL+EM    G+ P+  ++N ++ 
Sbjct: 157 IRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVK 216

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              + GK +EA+     M+   ++P   T+N M+NG CK      A RM   + + G  P
Sbjct: 217 WFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKP 276

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++ T N ++  LC   +   A  +  +    G+  + +TY T++   F+ ++    L++ 
Sbjct: 277 DICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLW 336

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             MK++G       Y  +I      G+  +A D + +++  G+  D VS N +I+ YC E
Sbjct: 337 EEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWE 396

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEA 359
           G ++ A+   ++M    F+ D +T  IL+ GLC+   ++ A +L   +++K     ++  
Sbjct: 397 GMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQN-SVDVVT 455

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN ++  L K+G++D A ++   MEVK    D +TY+++V  L  A R   A K +    
Sbjct: 456 YNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLS 515

Query: 416 KSG 418
           ++G
Sbjct: 516 ETG 518



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 212/460 (46%), Gaps = 57/460 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C   ++++A  +  +   L ++PDVVTYN LID   ++     G+ +L  M+ 
Sbjct: 141 NTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKS 200

Query: 71  -AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+ VT+N ++    +   ++ + D + +M+E G+ PD ++YN++++   + GK  
Sbjct: 201 RGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLG 260

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC------------------------------- 158
           EA R+  +M    L P   T N ML+ LC                               
Sbjct: 261 EAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLI 320

Query: 159 ----KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
               K +  D AL+++  ++K G VP +V+YN LI+GLC +G+   A   L EL + G  
Sbjct: 321 MGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLV 380

Query: 215 PNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           P+ ++   I+   C+     K   +  + M    +  D F    ++    ++  L++A  
Sbjct: 381 PDEVSCNIIIHGYCWEGMVDK-AFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFK 439

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
                ++    +D+V+YNT+I+  CKEG+L+ A+ L+ +ME + FE D+YT+  ++  L 
Sbjct: 440 LFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALT 499

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
            AG  + A    ++M+K                L + G+     +  + ++      YS 
Sbjct: 500 HAGRTEEAE---KFMSK----------------LSETGQAVKTHDTSQELDASSDIMYSQ 540

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            + +LC   +   A KL     + GV + K     ++DG 
Sbjct: 541 QISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGF 580



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 181/384 (47%), Gaps = 11/384 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           S DV TYN+L+ G      +  ++ + DEM  + + PDV +YN+L+   F+     E  R
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 134 VFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           + ++M   G + P   T NIM+    K    + A      + + G  P+  TYN +I G 
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CKAG+L  A  ++ E+   G  P+  T  T++      +K +   E+    +++GY  D 
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I  + K  +  +A    E+M   G+   +VSYN LI   C  GK + A   L+E
Sbjct: 314 VTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNE 373

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGK 369
           + ++G   D+ +  I+I G C  G +  A    ++ NK+    F  ++   N ++  L +
Sbjct: 374 LLEKGLVPDEVSCNIIIHGYCWEGMVDKA---FQFHNKMVGNSFKPDIFTRNILLRGLCR 430

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
              ++ A  +F S   K    D  TY++M+  LCK  RL  A  L+           +  
Sbjct: 431 VDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYT 490

Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
             A+V  L H+G   EA+K  SK+
Sbjct: 491 YNAIVRALTHAGRTEEAEKFMSKL 514



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 12/336 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCKA +L +A  ++ +  R G+ PD+ T N ++   C     +  Y +  + R+
Sbjct: 247 NTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARK 306

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D VTY +LI G  +      +L L +EM + GI P V SYN L+  L   GK D+
Sbjct: 307 RGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQ 366

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A     +++   L P   + NI+++G C     D A +    +  + F P++ T NIL++
Sbjct: 367 AVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLR 426

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+   L  A  +        ++ + +TY T++    +  +     ++++ M+ K +  
Sbjct: 427 GLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEP 486

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG---------VQLDIVS---YNTLINLYC 298
           D + Y  ++ A    GR +EA  +M ++   G          +LD  S   Y+  I+  C
Sbjct: 487 DQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLC 546

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            +GK + A  L  E E++G   +KYT+  L+DG  K
Sbjct: 547 TQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLK 582


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 206/437 (47%), Gaps = 43/437 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ +    K  RL +A ++I   ++ G+ P+VVT+NM+ID   +  + D    ++ +M 
Sbjct: 166 FNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKME 225

Query: 70  EAG---ISPDVVTYNS-----------------------------------LIAGATRNS 91
                 + PD VTYNS                                   L+ G TR  
Sbjct: 226 VMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVG 285

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  +  L DE++E G+ P+   YNS++H L   G  + A+ +  DMI   + P   T++
Sbjct: 286 SLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYS 345

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I++ GLC+N Y + A +  + + +   V +  ++N++I  LC++  L  A+ +L  +   
Sbjct: 346 IVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVR 405

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+ +T+ T++    ++ K +  +++   M + G   +   Y +VI  F K G    A
Sbjct: 406 GLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPA 465

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              ++ +   G+  D+V+YNTLI+ YC  GK++ A+ L  EM   G      T+  LI+ 
Sbjct: 466 ILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINS 524

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
           LCKAG++  A+  ++ M   G   +   Y  ++    K    +  I + + M +K    D
Sbjct: 525 LCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPD 584

Query: 388 SFTYSSMVHNLCKAKRL 404
             TY +MV  L + + +
Sbjct: 585 RQTYQTMVIPLLQEESV 601



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 197/401 (49%), Gaps = 10/401 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N + +   +  + +  G + +V T+N++I A  +        +++ R  + GI P+VV
Sbjct: 140 KLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVV 199

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMG---IPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           T+N +I GA +   +  +L L+ +M  M    + PD  +YNS ++   ++G    A    
Sbjct: 200 TFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFK 259

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M+  ++ P   T+  +++G  +    +NA R+   L + G +P  V YN +I  L   
Sbjct: 260 KEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSME 319

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A  +L ++ D    P+  TY+ +++   RN       + L  +       D F +
Sbjct: 320 GDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSH 379

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             VI    +   L  A   +  M   G+  D+V++ TLI+ +CK+GK+E A  + ++M K
Sbjct: 380 NVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIK 439

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRLGKDGKID 374
            G + +   +  +I+G  K G+   A L ++ + ++G FD  +  YN ++      GKID
Sbjct: 440 TGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFD--VVTYNTLIHGYCNCGKID 497

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            A  +F  M     +    TY++++++LCKA  +  A +L+
Sbjct: 498 QAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELM 538



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 192/448 (42%), Gaps = 6/448 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  + +  V T  +    E A  +I      G    V  +N  +    +    +  + 
Sbjct: 90  KSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWK 149

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M   G   +V T+N +I    +   L  ++ ++   L+ GI P+V ++N ++    
Sbjct: 150 MYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209

Query: 124 QLGKPDEANRVFQDM--ICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           ++G  D A ++ + M  + G  + P + T+N  +NG CK      A    + +      P
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEP 269

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            + TY  L+ G  + G L  A  +  EL + G  PN++ Y +I+         +    +L
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S M  K    D F Y  VI    + G L EA  +++ ++   +  D  S+N +IN  C+ 
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRS 389

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
             L  A  LL  M  +G   D  T   LID  CK G ++ A    E M K G   NL  Y
Sbjct: 390 NNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIY 449

Query: 361 NCIVDRLGKDGKIDHAI---NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           N +++   K+G  D AI   +    M + D  TY++++H  C   ++  A  L      S
Sbjct: 450 NSVINGFAKEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNS 509

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKI 445
           G+         +++ L  +G   +AK++
Sbjct: 510 GILASHVTYNTLINSLCKAGHVLQAKEL 537



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 5/287 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           +E A  ++ D I   + PD  TY+++I+  C+    +  +  L  + E  +  D  ++N 
Sbjct: 322 MEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNV 381

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMIC 140
           +I    R++ L+ +  LL  M   G+ PDV ++ +L+  HC  + GK + A +V++ MI 
Sbjct: 382 VINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHC--KDGKVENAIQVYEKMIK 439

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
               P    +N ++NG  K    D A+ +   L++ G   ++VTYN LI G C  G++  
Sbjct: 440 TGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQ 498

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +  E+ +SG   + +TY T++    +        E++  M  +G   D   Y  +I 
Sbjct: 499 AFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILIT 558

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           +F K    +E  +  + MV  GV  D  +Y T++    +E  +E  Y
Sbjct: 559 SFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEFDY 605



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/403 (21%), Positives = 190/403 (47%), Gaps = 25/403 (6%)

Query: 59  DAGYTILNRMREAGISPDVV----------------TYNSLIAGATRNSLLSCSLDLLDE 102
           DA + + N M   GISP  V                 +++L+   T+      + +++ +
Sbjct: 59  DALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITK 118

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-R 161
           +   G    V ++N+ +  L +L   +   +++++M+         TFN+++  L K  R
Sbjct: 119 LQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGR 178

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE---LGDSGHAPNAI 218
             +    ++R L K G  P +VT+N++I G  K G +  A  ++++   +      P+++
Sbjct: 179 LVEAVSVIYRSL-KTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSV 237

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY + +    +     +  E    M  K    +   Y T++  + ++G L+ A    +++
Sbjct: 238 TYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           V  G+  + V YN++I+    EG +E A LLL +M  +    D++T++I+I+GLC+ G +
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYL 357

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A   L+ + ++    +  ++N +++ L +   +  A  +  +M V+    D  T+ ++
Sbjct: 358 NEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTL 417

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +   CK  ++ +A ++    +K+G +       +V++G    G
Sbjct: 418 IDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEG 460



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 17/278 (6%)

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSG-----HAPNAITYTTIMKCCFRNRKYKLGLE 238
            ++ L++   + G    A  ++ +L   G     HA N    + ++K    NR +K+  E
Sbjct: 95  VFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFL-SHLLKLNDVNRFWKMYKE 153

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           ++S     GY  +   +  +I A  K GRL EA   + + +  G+  ++V++N +I+   
Sbjct: 154 MVSY----GYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAI 209

Query: 299 KEGKLEAAYLLLDEMEKQG---FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
           K G ++ A  L+ +ME       + D  T+   ++G CK GN+  A    + M     + 
Sbjct: 210 KMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEP 269

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+  Y  +VD   + G +++A  + + +  K    +S  Y+S++H L     +  AS LL
Sbjct: 270 NVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              +   +   +     V++GL  +G   EA K    I
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMI 367



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 1/146 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  +  F K    + A  ++ID +R   L DVVTYN LI  YC     D  + + + M
Sbjct: 448 IYNSVINGFAKEGSFDPA-ILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEM 506

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           R +GI    VTYN+LI    +   +  + +L+  M+  G+ PD  +Y  L+    +   P
Sbjct: 507 RNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSP 566

Query: 129 DEANRVFQDMICGDLTPCTATFNIML 154
           +E   +   M+   + P   T+  M+
Sbjct: 567 EEVIELHDYMVLKGVVPDRQTYQTMV 592


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 37/409 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FCKA ++++A   + +   +G+  D+V Y  LI  +C     D G  + + + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G SP  +TYN+LI G  +   L  + ++ + M+E G+ P+V++Y  L+  L  +GK  EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL--- 188
            +    MI  D  P   T+NI++N LCK+    +A+ +   ++K    P+ +TYNIL   
Sbjct: 337 LQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 189 ----------------------------------IKGLCKAGRLRTARWILKELGDSGHA 214
                                             I GLCK  RL  A  I   L +   A
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + +T   ++    +       +E+   +       +   Y  +I  F K G L  A   
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M    +Q  +  YN L++  CKEG L+ A+ L +EM++     D  +  I+IDG  K
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           AG+IK A   L  M++ G   +L  Y+ +++R  K G +D AI+ F+ M
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 204/450 (45%), Gaps = 41/450 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+     KA +++ +  R  ++PDV +YN +I  +C+    +    + N M+ 
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G S  +VT+  LI    +   +  ++  L EM  MG+  D+  Y SL+      G+ D 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F +++    +PC  T+N ++ G CK      A  +F  + + G  P + TY  LI 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G+ + A   L  + +    PNA+TY  I+    ++      +EI+  MK++    
Sbjct: 326 GLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYL 308
           D   Y  ++      G L EA+  +  M+ D      D++SYN LI+  CKE +L  A  
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 309 LLD-------------------------------EMEKQGFEC----DKYTHTILIDGLC 333
           + D                               E+ KQ  +     +  T+T +IDG C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF---- 389
           K G +  A+  L  M       ++  YNC++  L K+G +D A  +FE M+  ++F    
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +++ M+    KA  + SA  LL+   ++G+
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 206/421 (48%), Gaps = 6/421 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           + V+ + L++ Y Q       + +L  M + G + +V  +N L+ G  RN     ++ LL
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM    + PDV+SYN+++    +  + ++A  +  +M     +    T+ I+++  CK 
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A+   + ++  G   +LV Y  LI+G C  G L   + +  E+ + G +P AITY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+++   +  + K   EI   M  +G   + + Y  +I     +G+ KEA   +  M+ 
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
              + + V+YN +IN  CK+G +  A  +++ M+K+    D  T+ IL+ GLC  G++  
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 341 AR--LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSM 394
           A   L+L   +    D ++ +YN ++  L K+ ++  A++++    E +   D  T + +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +++  KA  +  A +L      S +        A++DG   +G    AK +  K+R++++
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 455 S 455
            
Sbjct: 526 Q 526



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 2/379 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  +L++A  I    I  GV P+V TY  LID  C           LN M E
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P+ VTYN +I    ++ L++ ++++++ M +    PD  +YN L+  L   G  DE
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 131 ANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           A+++   M+       P   ++N +++GLCK      AL ++  L +     + VT NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +    KAG +  A  + K++ DS    N+ TYT ++    +     +   +L  M+    
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
               F Y  ++++  K G L +A    E+M  D    D+VS+N +I+   K G +++A  
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL  M + G   D +T++ LI+   K G +  A    + M   GF+ +    + ++    
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645

Query: 369 KDGKIDHAINVFESMEVKD 387
             G+ D    + + +  KD
Sbjct: 646 SQGETDKLTELVKKLVDKD 664



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 151/327 (46%), Gaps = 2/327 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK   +  A  I+    +    PD +TYN+L+   C     D    +L  M +
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 71  AG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
                 PDV++YN+LI G  + + L  +LD+ D ++E     D  + N L++   + G  
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +++ +    +   + T+  M++G CK    + A  +   ++     P +  YN L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LCK G L  A  + +E+    + P+ +++  ++    +    K    +L  M R G 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D F Y  +I  F+K+G L EA  + ++MV  G + D    ++++     +G+ +    
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKA 335
           L+ ++  +    DK     ++D +C +
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNS 682



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 5/281 (1%)

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VFQ  +    +   A  N+M   L ++R  + A   +R + +       V+ + L++
Sbjct: 57  AVSVFQQAVDSGSSLAFAGSNLMAK-LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              +  +   A  +L  +   G A N   +  ++K   RN +    + +L  M+R     
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y TVI  F +   L++A +   +M   G    +V++  LI+ +CK GK++ A   L
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM+  G E D   +T LI G C  G +   +   + + + G       YN ++    K 
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
           G++  A  +FE M  +    + +TY+ ++  LC   +   A
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 199/413 (48%), Gaps = 15/413 (3%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY++L+   C+    D+   + + MR  GI PD      L++   R   L  + + L+E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI    + YN+L++ L +    DEA  +F++ +     P   +FNI++ GLC+    
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTT 222
           D A   F+ +   G  P++V+YN LI G C+   +     +LKE +   G +P+ ITYT+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           I+    +    K   E+   M   G   + F +  +I  F K+G ++ A    E+M+  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              D+V++ +LI+ YC+EG++     L +EM+ +    + YT+ +LI+ LCK   I+ AR
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             L ++           YN ++D   K GK+D A  +   M+ K    D  T++ ++   
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 399 CKAKRLPSASKLL-----LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           C   R+  A         ++C+   + I      +++  L  +G   EA +I+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITI-----NSLISCLLKAGMPNEASQIK 518



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 40/380 (10%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ L+    +  L   +  + D M   GI PD      L+    ++GK D A     ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
            C  +      +N +LN L K    D A+ +FR   +  FVP++ ++NILI+GLC+ G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A    + +G+ G  P+ ++Y T++                             G+C  
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLIN----------------------------GFC-- 260

Query: 259 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
                ++  + +  D + E M+  GV  D+++Y ++I+ YCK G ++AA  L DEM   G
Sbjct: 261 -----RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + + +T  +LIDG  K GN++ A +  E M  +G   ++  +  ++D   ++G+++  +
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375

Query: 378 NVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ++E M+V++     +TY+ +++ LCK  R+  A   L     S V         V+DG 
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435

Query: 434 RHSGCRREAKKIQSKIRMAK 453
             +G   EA  I ++++  K
Sbjct: 436 CKAGKVDEANFIVAEMQEKK 455



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 37/406 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+S  + N  +    K N +++A  +  + +    +PDV ++N+LI   C+    D  + 
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE-MLEMGIPPDVWSYNSLMHCL 122
               M   G  PD+V+YN+LI G  R + +S   DLL E ML  G+ PDV +Y S++   
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +LG    A+ +F +M+   + P   TFN++++G  K     +A+ M+  +   G +P++
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT+  LI G C+ G +     + +E+     +PN  TY  +                   
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVL------------------- 396

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                           I A  K  R++EA +++  + +  V      YN +I+ +CK GK
Sbjct: 397 ----------------INALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A  ++ EM+++    DK T TILI G C  G +  A      M +I    +    N 
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC-KAKRLPSA 407
           ++  L K G  + A  + ++   K +   SS+   L  K+ R+P+A
Sbjct: 501 LISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPAA 546


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 162/307 (52%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
             G+ P +VTYN L+D+YC+      G  +L+ M+  G +P+ VTYN LI G ++     
Sbjct: 533 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 592

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L+ EML+ G+    ++YN L++  F  G   EA  + ++M+    +P  AT+N  +
Sbjct: 593 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFI 652

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            GLCK     +A++    +  +  +P++V+YN LI G C+ G L  A  +  EL      
Sbjct: 653 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 712

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P  +TY T++    R  + ++  ++   M  +G   D   Y  ++    K+G L  A ++
Sbjct: 713 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 772

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M+ +G++LD  +Y T I    K G    A+ L +EM  +GF  D   + +++DGLCK
Sbjct: 773 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 832

Query: 335 AGNIKGA 341
            GN++ A
Sbjct: 833 LGNLEEA 839



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 154/302 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + ++CK  ++++   ++ +  R G  P+ VTYN+LI+   +   F+    ++  M +
Sbjct: 544 NTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 603

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+     TYN LI G     LL+ +L L +EM+  G  P V +YNS ++ L +LG+  +
Sbjct: 604 TGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSD 663

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +   DM+  +L P   ++N ++ G C+      A  +F  L+     P +VTYN L+ 
Sbjct: 664 AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 723

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+ G L  A+ +  E+ + G AP+ +TYT ++    +     +  E    M  +G   
Sbjct: 724 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 783

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + Y T I   +K+G    A    E+M+  G   D++ YN +++  CK G LE A  LL
Sbjct: 784 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 843

Query: 311 DE 312
            +
Sbjct: 844 QK 845



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 174/380 (45%), Gaps = 2/380 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            ++S ++L++ +  + K + +E+  ++    I+  + PDV   N ++             
Sbjct: 466 SEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 525

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M E GI P +VTYN+L+    +   +   LDLL EM   G  P+  +YN L++ L
Sbjct: 526 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 585

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G+ ++A  +  +M+   L     T+N ++ G         AL +   +   G  P +
Sbjct: 586 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTV 645

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            TYN  I GLCK GR+  A   L ++  +   P+ ++Y T++    R         +   
Sbjct: 646 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 705

Query: 243 MKRKGYTFDGF-GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           + R  Y F     Y T++    + G L+ A     +M+ +G+  DIV+Y  L+N  CK G
Sbjct: 706 L-RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 764

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L  A    DEM  +G E D Y +   I G  K G+   A    E M   GF  +L  YN
Sbjct: 765 SLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYN 824

Query: 362 CIVDRLGKDGKIDHAINVFE 381
            +VD L K G ++ A  + +
Sbjct: 825 VVVDGLCKLGNLEEASELLQ 844



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 172/371 (46%), Gaps = 6/371 (1%)

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI   ++ S++   L + D+M++  + PDV + N ++  L       +A  V++ M    
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P   T+N +L+  CK       L +   +Q+ G  P  VTYN+LI GL K G    A+
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            ++ E+  +G   +A TY  ++   F        L +   M  KG +     Y + I   
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K+GR+ +A   +  M+ + +  D+VSYNTLI  YC+ G L  A+LL DE+         
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715

Query: 323 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
            T+  L+DGLC+ G ++ A +L +E +N+ G   ++  Y  +V+   K G +  A   F+
Sbjct: 716 VTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMAQEFFD 774

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            M  +    DS+ Y++ +    K      A  L    L  G          VVDGL   G
Sbjct: 775 EMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLG 834

Query: 438 CRREAKKIQSK 448
              EA ++  K
Sbjct: 835 NLEEASELLQK 845



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 99/199 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+  A   + D +   +LPDVV+YN LI  YC+  +    + + + +R 
Sbjct: 649 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 708

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P +VTYN+L+ G  R   L  +  L  EM+  GI PD+ +Y  L++   ++G    
Sbjct: 709 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 768

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F +M+   L   +  +   + G  K   T  A  +   +   GF P+L+ YN+++ 
Sbjct: 769 AQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVD 828

Query: 191 GLCKAGRLRTARWILKELG 209
           GLCK G L  A  +L++ G
Sbjct: 829 GLCKLGNLEEASELLQKDG 847



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/226 (18%), Positives = 90/226 (39%), Gaps = 18/226 (7%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV--------------QLDI 287
           A  + G+    F +C ++    +   ++ A   ME+++   +              ++ +
Sbjct: 411 AESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSV 470

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
              + LI +Y K+  +E    + D+M K     D      ++  L     +  A      
Sbjct: 471 KILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRT 530

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           M + G    +  YN ++D   K GK+   +++   M+      +  TY+ +++ L K   
Sbjct: 531 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 590

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              A  L+   LK+G+++       ++ G  + G   EA  +Q ++
Sbjct: 591 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEM 636


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 214/484 (44%), Gaps = 42/484 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S    +  + ++ +A  L  A  I+    + GV PD+   N  I    +    +     L
Sbjct: 231 SPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFL 290

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            RM+ AGI PD+V+YN LI G      +  +L+L+ EM   G PPD  SY ++M  L + 
Sbjct: 291 ERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKD 350

Query: 126 GKPDEANRVFQDMIC-GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----- 179
            K +E  R+ ++M+   +L P   T+N ++  L K+ + D+AL   R  ++ GF      
Sbjct: 351 RKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVG 410

Query: 180 ------------------------------PELVTYNILIKGLCKAGRLRTARWILKELG 209
                                         P++VTY  +I G C+ G++  A+ +L+++ 
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMY 470

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             G  PN +TYT ++     N K     E+++  +   +T +   Y  V+    + G+L 
Sbjct: 471 KHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLS 530

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA D   +M+  G   + V  N LI   C+   +  A   L+E   +G   +    T +I
Sbjct: 531 EACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVI 590

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
            G C+ G++  A   LE M       +   Y  + D LGK  ++D A  +   M  K   
Sbjct: 591 YGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGID 650

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               TY +++H  C+  R+    KLL   +    +  K+    V++ L + G R EA+K+
Sbjct: 651 PTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKL 708

Query: 446 QSKI 449
             K+
Sbjct: 709 LGKV 712



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 185/385 (48%), Gaps = 9/385 (2%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI--SPDVVTYNSLIAGATRNSLLSCSLD 98
           D + Y  ++D   +         IL  M   GI  SP+  +Y  ++   +R  +L  +L 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALR 253

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L  M + G+ PD+   N+ ++ L +  K ++A R  + M    + P   ++N ++ G C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNA 217
                D+AL +   +   G  P+ V+Y  ++  LCK  ++   + +++ +  +S   P+ 
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY T++    ++      L  L   + KG+  D  GY  V+ +F K   + +A   +  
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVID 433

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M + G   D+V+Y  +I+ +C+ GK++ A  +L +M K G + +  T+T+L++GLC  G 
Sbjct: 434 MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
              AR  +    +  +  N   Y+ ++  L ++GK+  A ++   M  K    +    + 
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINL 553

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSG 418
           ++ +LC+ + +  A K L  CL  G
Sbjct: 554 LIQSLCRNQNVVGAKKYLEECLHKG 578



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 2/328 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V +FCK   ++KA++++ID    G  PDVVTY  +ID +C+    D    +L +M + G 
Sbjct: 415 VDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGC 474

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ VTY  L+ G   N     + ++++   E    P+  +Y+++MH L + GK  EA  
Sbjct: 475 KPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACD 534

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + ++MI     P     N+++  LC+N+    A +        G    +V +  +I G C
Sbjct: 535 LTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFC 594

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           + G L  A  +L+++  S   P+AITYTT+     +  +     E++  M  KG      
Sbjct: 595 QIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPV 654

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  VI  F + GR+ +    +E+M+    Q     YN +I   C  G  E A  LL ++
Sbjct: 655 TYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKV 712

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGA 341
            +   + D  T  ILI+     GN   A
Sbjct: 713 LRTASKLDAKTCHILIESYLIDGNALSA 740



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 5/302 (1%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +  ML+ L K R    A R+ R + + G       ++ ++    +AG LR A  IL  +
Sbjct: 199 VYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLM 258

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             +G  P+     T +    +  K +  L  L  MK  G   D   Y  +I  +  + R+
Sbjct: 259 QKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRI 318

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTI 327
            +A + + +M   G   D VSY T++   CK+ K+E    L++ M +      D+ T+  
Sbjct: 319 DDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNT 378

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           LI  L K G+   A + L    + GF  +   Y+ +VD   K+  ID A ++   M  K 
Sbjct: 379 LIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKG 438

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D  TY++++   C+  ++  A K+L    K G +        +++GL H+G   EA+
Sbjct: 439 CNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAR 498

Query: 444 KI 445
           ++
Sbjct: 499 EM 500



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 46/277 (16%)

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY--TFDGFGYC----------------- 256
           +AI Y T++    + R  +    IL  M R+G   + + F Y                  
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 257 ----------------TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
                           T I   VK  +L++A  ++E+M   G++ DIVSYN LI  YC  
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL--- 357
            +++ A  L+ EM  +G   DK ++  ++  LCK   ++  +  +E M +   +SNL   
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ---NSNLIPD 372

Query: 358 -EAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
              YN ++  L K G  D A+      E K    D   YS++V + CK K +  A  L++
Sbjct: 373 QVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVI 432

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                G         A++DG    G   EAKK+  ++
Sbjct: 433 DMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
           A ++  Y  D   Y T++    K    + A   +  M   G++    +++ ++  Y + G
Sbjct: 187 ADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAG 246

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L  A  +L  M+K G E D       I  L K   ++ A   LE M   G + ++ +YN
Sbjct: 247 MLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYN 306

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           C++       +ID A+ +   M  K    D  +Y +++  LCK +++    +L+
Sbjct: 307 CLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLM 360


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 203/434 (46%), Gaps = 7/434 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +    + NR+E A     D  R+ +  +V T+N++I+  C+          L 
Sbjct: 191 TETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG 250

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   GI P +VTYN+L+ G +    +  +  ++ EM   G  PD+ +YN ++  +   G
Sbjct: 251 IMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG 310

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +   A+ V ++M    L P + ++NI++ G   N   + A      + K G VP   TYN
Sbjct: 311 R---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYN 367

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL    ++  A  +++E+ + G   +++TY  ++    ++   K    +   M   
Sbjct: 368 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTD 427

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G     F Y ++I    +  + +EA +  E++V  G++ D+V  NTL++ +C  G ++ A
Sbjct: 428 GIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRA 487

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + LL EM++   + D  T+  L+ GLC  G  + AR  +  M + G   +  +YN ++  
Sbjct: 488 FSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 547

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K G   HA  V + M          TY++++  L K +    A +LL      G+   
Sbjct: 548 YSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607

Query: 423 KSAQKAVVDGLRHS 436
            S+  +V++ +  S
Sbjct: 608 DSSFCSVIEAMSKS 621



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 184/405 (45%), Gaps = 7/405 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
            + ++ ++  YCQ    D        M+E G  P   T N +++  +R + +  +     
Sbjct: 156 TILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYA 215

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           +M  M I  +V+++N +++ L + GK  +A      M    + P   T+N ++ G     
Sbjct: 216 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRG 275

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             + A  +   ++  GF P+L TYN ++  +C  GR   A  +L+E+   G  P++++Y 
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYN 332

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +++ C  N   +        M ++G     + Y T+I       +++ A   + ++   
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+ LD V+YN +IN YC+ G  + A+ L DEM   G +  ++T+T LI  LC+    + A
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 397
               E +   G   +L   N ++D     G +D A ++ + M+      D  TY+ ++  
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           LC   +   A +L+    + G++    +   ++ G    G  + A
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 557



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 178/399 (44%), Gaps = 7/399 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST L +  V  +C+   +++A          G  P   T N ++    +    +  +   
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M    I  +V T+N +I    +   L  +   L  M   GI P + +YN+L+      
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ + A  +  +M      P   T+N +L+ +C        LR  +G+   G VP+ V+Y
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGI---GLVPDSVSY 331

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NILI+G    G L TA     E+   G  P   TY T++   F   K +    ++  ++ 
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           KG   D   Y  VI  + + G  K+A    ++M+TDG++    +Y +LI + C+  K   
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTRE 451

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L +++  +G + D      L+DG C  GN+  A   L+ M+++  D +   YNC++ 
Sbjct: 452 ADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMR 511

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            L  +GK + A  +   M+ +    D  +Y++++    K
Sbjct: 512 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 152/313 (48%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
           +A  ++ +   +G++PD V+YN+LI         +  +   + M + G+ P   TYN+LI
Sbjct: 311 RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLI 370

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
            G    + +  +  L+ E+ E GI  D  +YN +++   Q G   +A  +  +M+   + 
Sbjct: 371 HGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIK 430

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T+  ++  LC+   T  A  +F  +   G  P+LV  N L+ G C  G +  A  +
Sbjct: 431 PTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL 490

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           LKE+      P+ +TY  +M+      K++   E++  MKR+G   D   Y T+I+ + K
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G  K A    ++M++ G    +++YN L+    K    E A  LL EM+ +G   +  +
Sbjct: 551 KGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSS 610

Query: 325 HTILIDGLCKAGN 337
              +I+ + K+ N
Sbjct: 611 FCSVIEAMSKSDN 623


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 226/459 (49%), Gaps = 17/459 (3%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +N+ +C      +CK  ++ +AE +++  +   + P+  +Y+ L+D +C+        ++
Sbjct: 357 MNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISV 416

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            N M   GI  +VVT+NSL+ G  R      +L +   ML+ G+ PD  SY +L+  LF+
Sbjct: 417 YNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK 476

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G+   A  ++ D++       T  FN M+NG CK      A   F  +++ GF P+ VT
Sbjct: 477 MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVT 536

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI G CK G +  A  + +++      P+   Y +++   F+++K +  +++LS M 
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG + +   Y T+IA +   GRL +A      M+  G   +++  + +++   + G+++
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRID 656

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKA--GNIKGARLH--LEYMNKIGFDSNLEAY 360
            A +LL +M       D +      D L KA  GN+   ++   L+  +K     N   Y
Sbjct: 657 EANMLLQKM----VNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVY 712

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N  +  L K GK+D A  +F S+ ++    D+FTY +++H    A  +  A  L    LK
Sbjct: 713 NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLK 772

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            G+        A+++GL  SG    A+K+  K+ +  ++
Sbjct: 773 RGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLA 811



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 180/386 (46%), Gaps = 16/386 (4%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N  +  FCK  ++ +AE        LG  PD VTY  LID YC+  + +  + + 
Sbjct: 498 STYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVK 557

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M +  I P +  YNSLI G  ++      +DLL EM   G+ P+V +Y +L+      
Sbjct: 558 EKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDE 617

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK------HGFV 179
           G+ D+A   + DMI     P     + +++ L +    D A  + + +        HG+ 
Sbjct: 618 GRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYF 677

Query: 180 PELVTYNILIKGLCKAGRLRTARW--ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             L   +         G L + +    L E   S   PN++ Y   +    ++ K     
Sbjct: 678 DRLHKAD--------DGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAK 729

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +I S++  +G++ D F YCT+I  +   G + +A    ++M+  G+  +I++YN LIN  
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK G L+ A  L D++  +G   +  ++ ILIDG CK GN + A      M K G   +L
Sbjct: 790 CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSL 849

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM 383
             Y+ ++    K G +  A N+ + M
Sbjct: 850 ITYSALIYGFCKQGDMGKATNLLDEM 875



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 192/422 (45%), Gaps = 42/422 (9%)

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            SP V  ++ ++       ++  +L + D M ++G  P + S N L+  L + G+   A 
Sbjct: 146 FSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            V+  +    + P   T +IM+N  CK+ + + A+   + +   GF   +VTYN LI G 
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGC 263

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR-KGYTFD 251
              G +  A  +LK +G+ G   N +T T ++K   R  K +   ++L  M+R +G   D
Sbjct: 264 VSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLD 323

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            + Y  +I  + ++ ++ +A    ++M+  G+++++   N LIN YCK G++  A  LL 
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLM 383

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
            M     E + Y+++ L+DG C+ G +  A      M ++G  SN+  +N ++  L + G
Sbjct: 384 RMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVG 443

Query: 372 KIDHAINVFESM--------EV-------------------------------KDSFTYS 392
             + A++V+  M        EV                               + ++ ++
Sbjct: 444 AFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFN 503

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           +M++  CK +++  A +      + G        + ++DG    G   EA K++ K+   
Sbjct: 504 TMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE 563

Query: 453 KI 454
            I
Sbjct: 564 AI 565



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/490 (21%), Positives = 201/490 (41%), Gaps = 75/490 (15%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  + ++ +  +C+   ++ A  +  +  +LG +P + + N L+ +  +         
Sbjct: 145 KFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAIL 204

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + +   GI PDV T + ++    ++  ++ ++D + EM  +G   +V +YNSL+    
Sbjct: 205 VYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCV 264

Query: 124 QLG-----------------------------------KPDEANRVFQDMICGD-LTPCT 147
            +G                                   K +EA +V ++M   + +    
Sbjct: 265 SIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDE 324

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
             + ++++G C+    D+A+R+   +   G    L   N LI G CK G++  A  +L  
Sbjct: 325 YAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMR 384

Query: 208 LGDSGHAPNAITYTTIMKCCFR-----------NRKYKLG-------------------- 236
           + D    P + +Y+T+M    R           N   ++G                    
Sbjct: 385 MVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGA 444

Query: 237 ----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
               L +   M ++G T D   YCT++    K+G    A      ++  G      ++NT
Sbjct: 445 FEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNT 504

Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           +IN +CK  K+  A    + M++ GFE D  T+  LIDG CK GN++ A    E M K  
Sbjct: 505 MINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEA 564

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
              ++E YN ++  L K  K    +++   M +K    +  TY +++   C   RL  A 
Sbjct: 565 ILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAF 624

Query: 409 KLLLSCLKSG 418
                 ++ G
Sbjct: 625 TAYFDMIEKG 634



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/376 (22%), Positives = 161/376 (42%), Gaps = 62/376 (16%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL-- 167
           P+V S+  L+H L +    DE      +++    TP             KN Y+   +  
Sbjct: 92  PNVNSHCKLVHILSRARMYDETRSYLNELV----TPS------------KNNYSSLVVWN 135

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            + R  +   F P    +++++K  C+ G ++ A  +   +G  G  P+  +   ++   
Sbjct: 136 ELVRVFEDFKFSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSL 193

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            R  +    + +   + R G   D F    ++ A+ K G +  A D++++M   G +L++
Sbjct: 194 VRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNV 253

Query: 288 VSYNTLIN-----------------------------------LYCKEGKLEAAYLLLDE 312
           V+YN+LI+                                    YC++ KLE A  +L E
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313

Query: 313 MEK-QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           ME+ +G   D+Y + +LIDG C+   +  A RL  E +N +G   NL   N +++   K+
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLN-VGLRMNLFICNALINGYCKN 372

Query: 371 GKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G++  A  +   M   D    S++YS+++   C+   +  A  +    L+ G++      
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTH 432

Query: 427 KAVVDGLRHSGCRREA 442
            +++ GL   G   +A
Sbjct: 433 NSLLKGLCRVGAFEDA 448


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 199/413 (48%), Gaps = 15/413 (3%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY++L+   C+    D+   + + MR  GI PD      L++   R   L  + + L+E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI    + YN+L++ L +    DEA  +F++ +     P   +FNI++ GLC+    
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE-LGDSGHAPNAITYTT 222
           D A   F+ +   G  P++V+YN LI G C+   +     +LKE +   G +P+ ITYT+
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           I+    +    K   E+   M   G   + F +  +I  F K+G ++ A    E+M+  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
              D+V++ +LI+ YC+EG++     L +EM+ +    + YT+ +LI+ LCK   I+ AR
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             L ++           YN ++D   K GK+D A  +   M+ K    D  T++ ++   
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 399 CKAKRLPSASKLL-----LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           C   R+  A         ++C+   + I      +++  L  +G   EA +I+
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITI-----NSLISCLLKAGMPNEASQIK 518



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 40/380 (10%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           TY+ L+    +  L   +  + D M   GI PD      L+    ++GK D A     ++
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
            C  +      +N +LN L K    D A+ +FR   +  FVP++ ++NILI+GLC+ G +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A    + +G+ G  P+ ++Y T++                             G+C  
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLIN----------------------------GFC-- 260

Query: 259 IAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
                ++  + +  D + E M+  GV  D+++Y ++I+ YCK G ++AA  L DEM   G
Sbjct: 261 -----RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSG 315

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + + +T  +LIDG  K GN++ A +  E M  +G   ++  +  ++D   ++G+++  +
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375

Query: 378 NVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            ++E M+V++     +TY+ +++ LCK  R+  A   L     S V         V+DG 
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435

Query: 434 RHSGCRREAKKIQSKIRMAK 453
             +G   EA  I ++++  K
Sbjct: 436 CKAGKVDEANFIVAEMQEKK 455



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 37/406 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+S  + N  +    K N +++A  +  + +    +PDV ++N+LI   C+    D  + 
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE-MLEMGIPPDVWSYNSLMHCL 122
               M   G  PD+V+YN+LI G  R + +S   DLL E ML  G+ PDV +Y S++   
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            +LG    A+ +F +M+   + P   TFN++++G  K     +A+ M+  +   G +P++
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT+  LI G C+ G +     + +E+     +PN  TY  +                   
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVL------------------- 396

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                           I A  K  R++EA +++  + +  V      YN +I+ +CK GK
Sbjct: 397 ----------------INALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           ++ A  ++ EM+++    DK T TILI G C  G +  A      M +I    +    N 
Sbjct: 441 VDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINS 500

Query: 363 IVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLC-KAKRLPSA 407
           ++  L K G  + A  + ++   K +   SS+   L  K+ R+P A
Sbjct: 501 LISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPLTRKSSRVPVA 546


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 9/368 (2%)

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
           +I+ Y +  S +    +  R+ E G  P V  YN L+      +       L   M + G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P+V++YN L+  L +  + D A+++F +M      P   T+  M++ LCK    D+A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA- 233

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
           R   G     F P +  YN LI G+CK GR+  A  +L E+ D+G  PN ++Y+ I+   
Sbjct: 234 RELAGR----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
             +   +L   + + M  +G   +   +  +I      G+L EA D  + M+ DG + ++
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           V+YNTLI+  C  G LE A  + D+M++ G   +  T++ILIDG  K+G++ GA      
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
           M   G   N+  Y C+VD L K+   D A ++ E M ++    ++ T+++ +  LC   R
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469

Query: 404 LPSASKLL 411
           +  A KLL
Sbjct: 470 VEWAMKLL 477



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 182/410 (44%), Gaps = 40/410 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---------- 53
           K S  + N  +   CK  R+E A  ++ + +  GV P+VV+Y+ +I++ C          
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFA 300

Query: 54  ---------------QFVSFDAGYTILNRMREA----------GISPDVVTYNSLIAGAT 88
                           F     G  +  ++ EA          G  P+VV YN+LI G  
Sbjct: 301 LFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLC 360

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
            N  L  +L + D+M   G  P+V +Y+ L+    + G    A+  +  MI     P   
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+  M++ LCKN   D A  +   +   G  P  +T+N  IKGLC  GR+  A  +L+ +
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  PN  TY  ++   FR  KY+    +   ++ +    +   Y TV+  F + G +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-QGFECDKYTHTI 327
            EA     + +  G   D ++YNT+I+ YCK+GK++ A  L++ +   + +  D  T+T 
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN----CIVDRLGKDGKI 373
           LI G C   NI+ A   L+     G   N   +N    C  D LG  G I
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPI 650



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 214/455 (47%), Gaps = 18/455 (3%)

Query: 2   FG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG K + R+ N  +      N+ +    +  +  + G++P+V TYN+L+ A C+    DA
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSL 118
            + +   M   G  PD VTY ++++         C    +D+  E+     P V  YN+L
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSL-------CKAGKIDDARELAGRFKPSVPVYNAL 250

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +  + + G+ + A ++  +M+   + P   +++ ++N LC +   + A  +F  +   G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
              + T+  LIKG    G+L  A  + K +   G  PN + Y T++     N   +  L+
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+R G   +   Y  +I  F K G L  A++   +M++ G + ++V+Y  ++++ C
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           K    + A  L+++M  +G   +  T    I GLC  G ++ A   LE M   G   N+ 
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++D L +  K + A  +F+ +E +    +  TY+++++   +A  +  A +L    
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           L  G     +      + + H+ C++   KI +++
Sbjct: 551 LVRGT----APDSITYNTMIHAYCKQGKVKIAAQL 581



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 36/267 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K+  L  A       I  G  P+VVTY  ++D  C+   FD   +++ +M   G +P+
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +T+N+ I G   N  +  ++ LL+ M   G  P++ +YN L+  LF++ K +EA  +FQ
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQ--------------KHG 177
           ++   +L P   T+N +L G  +      AL++F     RG                K G
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573

Query: 178 FV-----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            V                 P+++TY  LI G C    +  A   L +  + G  PN  T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKG 247
             +++C F +  +   + IL  + RKG
Sbjct: 634 NALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 202/406 (49%), Gaps = 5/406 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + T C+  ++  A +++ D +  G  PDVVTYN+L++A C+   +     +++ MR 
Sbjct: 11  NPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRA 70

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ VTYN L+ G      +  +L+LL  +   G  P   +YN+++  L    +  +
Sbjct: 71  EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 130

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +  +M+  +  P  ATFN+++  LC+      A+++   + KHG    +VTYN +I 
Sbjct: 131 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 190

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+   +  A  +L ++   G  P+ +TY T++K      ++    E++  M + G   
Sbjct: 191 GLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLP 250

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I    + G + +A +  +QM   G   + ++Y+T+I+   K  KL+ A  L 
Sbjct: 251 DNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 310

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM  +GF  DK  + +L + L     I+ A   +  +   G   +   YN I+  L ++
Sbjct: 311 NEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 369

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           GK + AI++   M     + D  TY  ++  L     L  A +LL+
Sbjct: 370 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 415



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 192/418 (45%), Gaps = 5/418 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           + V P+  TYN LI   C+        ++L+ M   G +PDVVTYN L+    +      
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +++L+D M   G  P+  +YN LM  +   G  D+A  + +++      P T  +N +L 
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC      +A  +   + +    P   T+N++I  LC+ G L+ A  +L+++   G   
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  I+      R     + +LS MK  G   D   Y T++       R  +A + M
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M  +G   D V++NTLI   C++G +  A  +  +M  +G   +  T++ +I GL KA
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
             +  A      M   GF+ + + Y  + + L  D  I+ AI     ++       +  Y
Sbjct: 301 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++++  LC+  +   A  ++   + SG          +++GL + G   EA+++  K+
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 1/307 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST   N  +   C A R   A+ ++ + +R    P+  T+N++I + C+         
Sbjct: 109 KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQ 168

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M + G + ++VTYN++I G      +  ++ LL +M   G  PD+ +YN+L+  L 
Sbjct: 169 LLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLC 228

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              +  +A  +  +M      P   TFN ++  LC+     +A+ +F+ +   G  P  +
Sbjct: 229 SAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSI 288

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ +I GL KA +L  A  +  E+G  G  P+ I Y  + +C   +   +  ++ +  +
Sbjct: 289 TYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKL 347

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +  G +     Y  ++    + G+ + A D M  MV+ G   D ++Y  LI     EG L
Sbjct: 348 QDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYL 407

Query: 304 EAAYLLL 310
             A  LL
Sbjct: 408 NEARELL 414


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 186/367 (50%), Gaps = 1/367 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  ++ KA   + +    G+ P+VVTY+ LIDA C+          L  MR 
Sbjct: 326 NALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRR 385

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+  TY SLI    +   LS +L L DEML++ +  +V +Y +L+  L + G+  E
Sbjct: 386 VGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMME 445

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+ MI   +TP   T+  +++G  KN+  +NAL + + +++    P+L+ Y  +I 
Sbjct: 446 AEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIW 505

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC   +L    +++ E+   G   N++ YT  M   F+  K    L +L  M   G   
Sbjct: 506 GLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEV 565

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT-LINLYCKEGKLEAAYLL 309
               +C +I    K G ++EA DY  +M    +Q + V+  T LI+  CK   +EAA  L
Sbjct: 566 TIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKL 625

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            DEM+ +    DK  +T LIDG  K  + + A      M+++G + +L AY  +V  L +
Sbjct: 626 FDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQ 685

Query: 370 DGKIDHA 376
              +  A
Sbjct: 686 GNLVQQA 692



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 209/424 (49%), Gaps = 7/424 (1%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D +  G+   V TYN++I   C+        ++ ++M++ G++PD+VTYNSLI G  +  
Sbjct: 242 DMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLG 301

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
           LL  S  L +EM ++G  PDV +YN+L++C  +  +  +A     +M    L P   T++
Sbjct: 302 LLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYS 361

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++ LCK      A++    +++ G  P   TY  LI   CKAG L  A  +  E+   
Sbjct: 362 TLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQV 421

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
               N +TYTT++    +  +     ++  AM + G T +   Y  ++   +K  R++ A
Sbjct: 422 QVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENA 481

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            + ++++    ++ D++ Y T+I   C + KLE    ++ EM+  G   +   +TI +D 
Sbjct: 482 LELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDA 541

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-----EVK 386
             K G    A   L+ M  +G +  +  +  ++D L K G ++ AI+ F  M     +  
Sbjct: 542 YFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPN 601

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG-LRHSGCRREAKKI 445
           +    ++++  LCK   + +A KL        +   K A  A++DG L+H    +EA  I
Sbjct: 602 NVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDF-QEALNI 660

Query: 446 QSKI 449
           +S++
Sbjct: 661 RSRM 664



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 4/350 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      +L  +      M    + P   S N+ ++ L + GK D +N+ 
Sbjct: 180 PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKF 239

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DM+   +     T+NIM+  +CK      A  +F  +++ G  P++VTYN LI G  K
Sbjct: 240 FRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G L  +  + +E+ D G  P+ ITY  ++ C  +  +       L  MK  G   +   
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T+I A  K   L++A  ++  M   G+  +  +Y +LI+  CK G L  A  L DEM 
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +     +  T+T L+DGLCK G +  A      M K G   NL+ Y  +V    K+ +++
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479

Query: 375 HA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +A      + E     D   Y +++  LC   +L     ++      G+R
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR 529



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 185/421 (43%), Gaps = 6/421 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           +P    ++ L   + +    +      +RM    + P   + N+ +    +      S  
Sbjct: 179 VPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNK 238

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
              +M+  GI   V++YN ++  + + G    A  +F  M    LTP   T+N +++G  
Sbjct: 239 FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYG 298

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K    D +  +F  ++  G  P+++TYN LI   CK  ++  A   L E+ +SG  PN +
Sbjct: 299 KLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVV 358

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY+T++    +    +  ++ L  M+R G + + F Y ++I A  K G L +A    ++M
Sbjct: 359 TYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEM 418

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   V  ++V+Y TL++  CKEG++  A  L   M K G   +  T+T L+ G  K   +
Sbjct: 419 LQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRV 478

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSM 394
           + A   L+ + +     +L  Y  I+  L    K++    V   M+      +S  Y+  
Sbjct: 479 ENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIR 538

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +    K  +   A  LL      GV +       ++DGL   G   EA  I    RMA  
Sbjct: 539 MDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEA--IDYFARMADF 596

Query: 455 S 455
           +
Sbjct: 597 N 597



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 3/301 (0%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R+ +AE +    I+ GV P++ TY  L+  + +    +    +L  ++E  I PD+
Sbjct: 438 CKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDL 497

Query: 78  VTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + Y ++I G  ++N L  C   ++ EM   GI  +   Y   M   F+ GK  EA  + Q
Sbjct: 498 LLYGTIIWGLCSQNKLEECEF-VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQ 556

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY-NILIKGLCKA 195
           +M    +     TF ++++GLCK    + A+  F  +      P  V     LI GLCK 
Sbjct: 557 EMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKN 616

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
             +  A+ +  E+ D    P+ I YT ++    +++ ++  L I S M   G   D   Y
Sbjct: 617 NYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAY 676

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            +++    +   +++A  ++ +M+  G+  D +    L+  Y + G ++ A  L DE+ K
Sbjct: 677 TSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK 736

Query: 316 Q 316
           +
Sbjct: 737 K 737



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 37/387 (9%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK + L++A   ++D  R+G+ P+  TY  LIDA C+         + + M +  +  +V
Sbjct: 368 CKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNV 427

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC---------------- 121
           VTY +L+ G  +   +  + DL   M++ G+ P++ +Y +L+H                 
Sbjct: 428 VTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKE 487

Query: 122 -------------------LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
                              L    K +E   V  +M    +   +  + I ++   K   
Sbjct: 488 IKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGK 547

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY-T 221
           T  AL + + +   G    +VT+ +LI GLCK G +  A      + D    PN +   T
Sbjct: 548 TVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCT 607

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +N   +   ++   M+ K    D   Y  +I   +K    +EA +   +M   
Sbjct: 608 ALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSEL 667

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++LD+ +Y +L+    +   ++ A + L+EM  +G   D+     L+    + G+I  A
Sbjct: 668 GMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEA 727

Query: 342 -RLHLEYMNKIGFDSNLEAYNCIVDRL 367
             LH E + K+  D  LE  N + +++
Sbjct: 728 IELHDELLKKVPLDELLEEQNLMPEKI 754



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 26/297 (8%)

Query: 166 ALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           AL+ FR  + K GF     +Y +L+  L  A     A + LKEL  S             
Sbjct: 112 ALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISS------------- 158

Query: 225 KCCFRNRKYKLGLEILSAM-KRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDG 282
                 R+   G ++   +   +     GFG +  + + F+++G L+EA     +M    
Sbjct: 159 ------RRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFR 212

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           V     S N  +    K GK + +     +M   G     +T+ I+I  +CK G++  A+
Sbjct: 213 VFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAK 272

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 398
                M ++G   ++  YN ++D  GK G +D +  +FE M+      D  TY+++++  
Sbjct: 273 SLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCF 332

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           CK +++P A   L     SG++        ++D L      ++A K    +R   +S
Sbjct: 333 CKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLS 389



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 5/134 (3%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N+ VCT      CK N +E A+ +  +     ++PD + Y  LID   +   F     I 
Sbjct: 602 NVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIR 661

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +RM E G+  D+  Y SL+ G ++ +L+  +   L+EM+  GI PD      L+   ++L
Sbjct: 662 SRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYEL 721

Query: 126 GKPDEANRVFQDMI 139
           G  DEA  +  +++
Sbjct: 722 GSIDEAIELHDELL 735


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 211/433 (48%), Gaps = 39/433 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + E+AE ++ + IR    P+ VT+   I A+CQ    D    +L +M + G  PD
Sbjct: 229 LCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPD 288

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y++L+ G + +  +  +L LL  ML     P+   YN+ +  L   G+ DE   +  
Sbjct: 289 VVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIA 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+  D  P  ATF+ ++N LC+NR  + A+ +   +QK+G++P++V+YN +I    +  
Sbjct: 346 EMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQA 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A   LK L      P+ I++  ++KC  R  ++    E+++ M ++    +   + 
Sbjct: 406 CADDA---LKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFN 462

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I +  + G++K+A +  E M       DIV+Y++LIN + ++G  + A+ L   M  +
Sbjct: 463 ILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCR 522

Query: 317 G------------------------------FEC--DKYTHTILIDGLCKAGNIKGARLH 344
                                           +C  ++ T  ILI+ LC+ G +  A   
Sbjct: 523 ADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHNLCKAKR 403
            E M K G   ++  YN +++   + G +D A+    +M  + D+ +Y+S++  LC+A+R
Sbjct: 583 YEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCEPDTISYNSILKGLCRAER 642

Query: 404 LPSASKLLLSCLK 416
              A KL+   L+
Sbjct: 643 WKDAEKLVTEMLR 655



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 221/507 (43%), Gaps = 76/507 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C   RL  AE ++ + ++     D V++N L+  YC+  S      +L   R 
Sbjct: 123 NILIKKLCARRRLADAERVL-EALKTSGAADAVSHNTLVAGYCRDGSLWDAERVLEAARA 181

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G + +VVTY +LI G  R+  L+ +L L+     M + PD ++YN+++  L    + +E
Sbjct: 182 SGAA-NVVTYTALIDGYCRSGRLTDALRLI---ASMPVAPDTYTYNTVLKGLCFAKQWEE 237

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI- 189
           A  + ++MI  +  P   TF   +   C+N   D A+ +   + K+G +P++V Y+ L+ 
Sbjct: 238 AEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVN 297

Query: 190 -------------------------------KGLCKAGRLRTARWILKELGDSGHAPNAI 218
                                          KGLC AGR      ++ E+      PN  
Sbjct: 298 GFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDA 357

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           T++T++    +NR  +  +E+L  M++ GY  D   Y T+I+ F +     +A   +  M
Sbjct: 358 TFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSM 417

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +    + D +S+N ++   C+  +   A  L+ +M K+    ++ T  ILID LC+ G +
Sbjct: 418 L---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQV 474

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSS---- 393
           K A    E M K     ++  Y+ +++   + G    A ++F SM  + D F+Y++    
Sbjct: 475 KDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKG 534

Query: 394 -------------------------------MVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
                                          ++++LC+   +  A ++     K G+   
Sbjct: 535 LCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPD 594

Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
                A+++G    GC  +A K  S +
Sbjct: 595 IFTYNALINGYSEQGCLDDALKFLSTM 621



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 10/351 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  + +T   N  +   C A R ++   +I + +R    P+  T++ LI++ CQ    + 
Sbjct: 315 MLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEY 374

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +L +M++ G  PDVV+YN++I+  +  +    +L LL+ ML     PD  S+N+++ 
Sbjct: 375 AIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLK 431

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           CL +  +  +A  +   M+  D      TFNI+++ LC+N    +A+ MF  + K+   P
Sbjct: 432 CLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTP 491

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++VTY+ LI G  + G  + A  + + +       +  +Y   +K      ++    E++
Sbjct: 492 DIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELI 548

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  K    +   +  +I +  + G +  A +  EQM   G+  DI +YN LIN Y ++
Sbjct: 549 ADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQ 608

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNK 350
           G L+ A   L  M     E D  ++  ++ GLC+A   K A +L  E + K
Sbjct: 609 GCLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRK 656



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 6/264 (2%)

Query: 1   MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           M  K  T   N  +   C+A R   A  ++   ++     + +T+N+LID+ CQ      
Sbjct: 417 MLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKD 476

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +   M +   +PD+VTY+SLI G +   L   + DL   M       D++SYN+ + 
Sbjct: 477 AIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFSYNATLK 533

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L    + D+A  +  DM+  D  P   TFNI++N LC+    + A+ ++  + K+G  P
Sbjct: 534 GLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITP 593

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++ TYN LI G  + G L  A   LK L      P+ I+Y +I+K   R  ++K   +++
Sbjct: 594 DIFTYNALINGYSEQGCLDDA---LKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLV 650

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVK 264
           + M RK  T +   +      F+K
Sbjct: 651 TEMLRKNCTPNEVTFKYANQLFIK 674



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 155/363 (42%), Gaps = 67/363 (18%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P   T NI++  LC  R   +A R+   L+  G   + V++N L+ G C+ G L  A  +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 205 LKELGDSGH-------------------------------APNAITYTTIMK-CCFRNRK 232
           L+    SG                                AP+  TY T++K  CF  ++
Sbjct: 176 LEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPVAPDTYTYNTVLKGLCFA-KQ 234

Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
           ++   E++  M R     +   + T I AF + G L  A + +EQM   G   D+V Y+T
Sbjct: 235 WEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYST 294

Query: 293 LINLYCKEGKLEAAYLLLD--------------------------------EMEKQGFEC 320
           L+N + + G+++ A  LL                                 EM ++    
Sbjct: 295 LVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPP 354

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           +  T + LI+ LC+    + A   LE M K G+  ++ +YN I+    +    D A+ + 
Sbjct: 355 NDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLL 414

Query: 381 ESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
            SM  K D+ ++++++  LC+A+R   A++L+   LK      +     ++D L  +G  
Sbjct: 415 NSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQV 474

Query: 440 REA 442
           ++A
Sbjct: 475 KDA 477


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 198/424 (46%), Gaps = 8/424 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P+V+ YN  I++  +   ++   +++  M   G++PDV++Y+S I+   R      +L
Sbjct: 134 VTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEAL 193

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           +L ++M   G+ PDV +Y S +      G+  EA  + + +    LTP   +++ ++   
Sbjct: 194 ELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITAC 253

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            K      AL + R ++     P ++TYN  I    K GR + A  +L+E+   G  P+ 
Sbjct: 254 AKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDV 313

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           ++Y++++  C +  ++K  ++IL  M   G + +   Y + I A  K G+ KEA   + +
Sbjct: 314 VSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLRE 373

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M T GV   ++ YN+ I    K  + + A  LL EM   G     ++++  ID  C  GN
Sbjct: 374 MPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDA-CGKGN 432

Query: 338 --IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
             IK   L L  M  +G   N   YN  +D  G+  + + A+++   M       D F+Y
Sbjct: 433 LWIKAKEL-LREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSY 491

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
           SS +    K  +   A  +L     +G+        + +D     G  + A  +  ++R 
Sbjct: 492 SSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRA 551

Query: 452 AKIS 455
           A ++
Sbjct: 552 AGLT 555



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 184/401 (45%), Gaps = 5/401 (1%)

Query: 16  TFC-KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           T C +  + E+A  ++ +    G  PD+  Y+ +IDA  +   +      L  M   GI+
Sbjct: 41  TACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIA 100

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PD  +Y + I    R      +LDLL EML   + P+V  YNS ++   + G+ + A  +
Sbjct: 101 PDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSL 160

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            ++M    L P   +++  ++   +    + AL +F  ++  G  P+++TY   I     
Sbjct: 161 VKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACAN 220

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GR + A  +L+++   G  PN I+Y++++  C +  ++K+ L++L  MK      +   
Sbjct: 221 GGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIIT 280

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y   I A  K GR KEA D + +M T G+  D+VSY+++I+   K  + + A  +L EM 
Sbjct: 281 YNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMP 340

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G   +  ++   ID   K G  K A+  L  M   G    +  YN  +    K  +  
Sbjct: 341 TVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWK 400

Query: 375 HAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 411
            A+ +   M         F+YSS +    K      A +LL
Sbjct: 401 EALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELL 441



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 198/450 (44%), Gaps = 39/450 (8%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N  + +  KA + E A +++ +   +G+ PDV++Y+  I A  +   ++    +   M
Sbjct: 140 IYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDM 199

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           R +G++PDV+TY S IA          ++ LL ++  +G+ P+V SY+S++    + G+ 
Sbjct: 200 RTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQW 259

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
             A  + ++M    L P   T+N  ++   K      A+ + R +   G  P++V+Y+ +
Sbjct: 260 KIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSV 319

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I    K  R + A  IL+E+   G +PNAI+Y + +  C +  ++K    +L  M   G 
Sbjct: 320 IDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGV 379

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI------NLYCKEGK 302
           T    GY + IAA  K  + KEA   + +M T G+   + SY++ I      NL+ K  +
Sbjct: 380 TQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKE 439

Query: 303 L-----------------------------EAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           L                             E A  LL EM   G   D ++++  I    
Sbjct: 440 LLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACA 499

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSF 389
           K    K A   L+ M+  G   +L  YN  +D   K G+   A+ +   M       +  
Sbjct: 500 KGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNII 559

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +YSS +    +  +      LL     SGV
Sbjct: 560 SYSSAIDACVRGGQWKEGIALLEEMRGSGV 589



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 155/325 (47%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+++TYN  IDA  +   +     +L  M   G+ PDVV+Y+S+I   ++      ++D+
Sbjct: 276 PNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDI 335

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L EM  +G+ P+  SYNS +    + G+  EA  + ++M    +T     +N  +    K
Sbjct: 336 LREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAK 395

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                 AL + R +   G    + +Y+  I    K      A+ +L+E+   G APN + 
Sbjct: 396 GEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVC 455

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y + +  C R  +++  +++L  M   G + D F Y + IAA  K  + KEA   +++M 
Sbjct: 456 YNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMS 515

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+  D++ YN+ I+   K G+ + A  LL EM   G   +  +++  ID   + G  K
Sbjct: 516 AAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWK 575

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIV 364
                LE M   G   ++  Y+ ++
Sbjct: 576 EGIALLEEMRGSGVVPDVITYHALM 600



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 176/387 (45%), Gaps = 6/387 (1%)

Query: 31  IDGIR--LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           +DG++   G L D  +Y M I A  +   ++    +L  M   G +PD+  Y+++I    
Sbjct: 20  VDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACA 79

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           +      ++  L EM   GI PD  SY + ++   + G+   A  + ++M+  D+TP   
Sbjct: 80  KGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVI 139

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
            +N  +N   K    + A+ + + +   G  P++++Y+  I    + GR   A  + +++
Sbjct: 140 IYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDM 199

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
             SG AP+ ITY + +  C    ++K  + +L  +   G T +   Y +VI A  K G+ 
Sbjct: 200 RTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQW 259

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           K A D + +M    +  +I++YN  I+   K G+ + A  LL EM   G   D  +++ +
Sbjct: 260 KIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSV 319

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
           ID   K    K A   L  M  +G   N  +YN  +D   K G+   A  +   M     
Sbjct: 320 IDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGV 379

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            +    Y+S +    K ++   A  LL
Sbjct: 380 TQRVIGYNSAIAACAKGEQWKEALALL 406



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 144/319 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  R ++A  ++ +   +G+ PDVV+Y+ +IDA  +   +     IL  M  
Sbjct: 282 NAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPT 341

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SP+ ++YNS I    +      +  LL EM   G+   V  YNS +    +  +  E
Sbjct: 342 VGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKE 401

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    L     +++  ++   K      A  + R +   G  P  V YN  I 
Sbjct: 402 ALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAID 461

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              +  +   A  +L+E+   G +P+  +Y++ +  C +  ++K  L +L  M   G   
Sbjct: 462 ACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAP 521

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y + I A  K GR K A   + +M   G+  +I+SY++ I+   + G+ +    LL
Sbjct: 522 DLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALL 581

Query: 311 DEMEKQGFECDKYTHTILI 329
           +EM   G   D  T+  L+
Sbjct: 582 EEMRGSGVVPDVITYHALM 600


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 13/328 (3%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI-- 73
           FC+A R ++A  I++     LG +PDV +YN+L+ + C          +L  M E G   
Sbjct: 122 FCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVC 181

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVV YN++I G  +   ++ + DL  EM++ GIPPD+ +YNS++H L +    D+A  
Sbjct: 182 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEA 241

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             + M+   + P   T+N ++ G         A+R+F+ +++H  +P++VT ++L+  LC
Sbjct: 242 FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLC 301

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIM-----KCCFRNRKYKLGLEILSAMKRKGY 248
           K G+++ AR +   +   G  P+  +Y  ++     K C  +       ++   M   G 
Sbjct: 302 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-----DLFDLMLGDGI 356

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D + +   I A+   G L +A     +M   GV+ D+V+Y T+I   C+ GK++ A  
Sbjct: 357 APDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 416

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAG 336
             ++M  QG   DKY +  LI G C  G
Sbjct: 417 KFNQMIDQGVAPDKYAYNCLIQGFCTHG 444



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 165/353 (46%), Gaps = 5/353 (1%)

Query: 15  CTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NRMREAGI 73
           CT  +A+R E A A     +R G+  D +  + L+  +C+    D    IL +R  E G 
Sbjct: 87  CT--RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGC 144

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQLGKPDEA 131
            PDV +YN L+           + +LL  M E G    PDV +YN+++   F+ G  ++A
Sbjct: 145 VPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKA 204

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F++M+   + P   T+N +++ LCK R  D A    R +     +P   TYN LI G
Sbjct: 205 CDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 264

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
               G+ + A  + KE+      P+ +T + +M    +  K K   ++   M  KG   D
Sbjct: 265 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 324

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  ++  +   G L + TD  + M+ DG+  D  ++N  I  Y   G L+ A ++ +
Sbjct: 325 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFN 384

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
           EM   G + D  T+  +I  LC+ G +  A      M   G   +  AYNC++
Sbjct: 385 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 437



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 7/367 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD- 98
           P   TY +L+D   +    +       ++   G+  D +  + L+ G         +LD 
Sbjct: 75  PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 134

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL--TPCTATFNIMLNG 156
           LL    E+G  PDV+SYN L+  L   GK  +A+ + + M  G    +P    +N +++G
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDG 194

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    + A  +F+ + + G  P+LVTYN ++  LCKA  +  A   L+++ +    PN
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 254

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY  ++       ++K  + +   M+R     D      ++ +  K G++KEA D  +
Sbjct: 255 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 314

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   D+ SYN ++N Y  +G L     L D M   G   D YT  + I      G
Sbjct: 315 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCG 374

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A +    M   G   ++  Y  ++  L + GK+D A+  F  M       D + Y+
Sbjct: 375 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 434

Query: 393 SMVHNLC 399
            ++   C
Sbjct: 435 CLIQGFC 441



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 35/293 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F K   + KA  +  + ++ G+ PD+VTYN ++ A C+  + D     L +M  
Sbjct: 189 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 248

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + P+  TYN+LI G +       ++ +  EM    I PDV + + LM  L + GK  E
Sbjct: 249 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 308

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M      P   ++NIMLNG        +   +F  +   G  P+  T+N+ IK
Sbjct: 309 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIK 368

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                G L  A  I  E+ D G  P+ +TY T+                           
Sbjct: 369 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV--------------------------- 401

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
                   IAA  +IG++ +A +   QM+  GV  D  +YN LI  +C  G L
Sbjct: 402 --------IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGIL 446



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 42/368 (11%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P  ++Y  LM C  +  +P+ A   F  ++   L       + +L G C+ + TD AL
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 168 R-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYTTIM 224
             +     + G VP++ +YNIL+K LC  G+   A  +L+ + + G   +P+ + Y T++
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              F+        ++   M ++G   D   Y +V+ A  K   + +A  ++ QMV   V 
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            +  +YN LI  Y   G+ + A  +  EM +     D  T ++L+  LCK G IK AR  
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312

Query: 345 LEYMNKIGFDSNLEAYN----------CIVD-------RLGKD----------------- 370
            + M   G + ++ +YN          C+VD        LG                   
Sbjct: 313 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYAN 372

Query: 371 -GKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +D A+ +F  M    VK D  TY +++  LC+  ++  A +     +  GV   K A
Sbjct: 373 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 432

Query: 426 QKAVVDGL 433
              ++ G 
Sbjct: 433 YNCLIQGF 440



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 38/246 (15%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           +P + TY  +M CC R  + +L L     + R G   D      ++  F +  R  EA D
Sbjct: 74  SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 133

Query: 274 YMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            +     + G   D+ SYN L+   C +GK   A  LL  M + G  C            
Sbjct: 134 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCS----------- 182

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
                                  ++ AYN ++D   K+G ++ A ++F+ M  +    D 
Sbjct: 183 ----------------------PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDL 220

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            TY+S+VH LCKA+ +  A   L   +   V         ++ G   +G  +EA ++  +
Sbjct: 221 VTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 280

Query: 449 IRMAKI 454
           +R   I
Sbjct: 281 MRRHSI 286



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 76/151 (50%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L++ + + CK  ++++A  +       G  PDV +YN++++ Y           + + M 
Sbjct: 293 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 352

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI+PD  T+N  I       +L  ++ + +EM + G+ PDV +Y +++  L ++GK D
Sbjct: 353 GDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 412

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +A   F  MI   + P    +N ++ G C +
Sbjct: 413 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 443


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 181/347 (52%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+I +  FC  +R++   +++   ++LG+ P +VT+  L++  C     D    + + M 
Sbjct: 100 LSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDML 159

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ P+V TYN +I   +++   + +L  L +M ++G  P+V +Y++L+      G+ D
Sbjct: 160 VRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMD 219

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  VF  M+    TP   T+  ++NG CK    + A+++     + G VP++VT+  +I
Sbjct: 220 EARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTII 279

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+AGR   A+ + + +   GH PN +TY  ++    ++   +    +   M+R    
Sbjct: 280 SGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVK 339

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I +  K G++K+  +   +++ +G++ ++ +Y  L+   CKEG +  A+ L
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKL 399

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             +ME+ G   DK  + ++I G  +  +   AR  +E M   GF ++
Sbjct: 400 FRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 183/379 (48%), Gaps = 5/379 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           LP +V ++ L  +  +   ++    +   +   GI  D+ + + LI        +   L 
Sbjct: 59  LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           +L ++L++G+ P + ++ +L++ L   GK D+   ++ DM+   L P   T+N+++N L 
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K+   + AL   + ++K G VP +V Y+ LI G C  G++  AR +   +   G  PN  
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TYT++M    +  + +  +++L    RKG   D   + T+I+   + GR   A      +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   +I++Y  L++  CK G LE A+ L  EM++   + +   +TILID LCK G I
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           K  +     +   G   N+  Y  +V  L K+G I  A  +F  ME      D   Y+ +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418

Query: 395 VHNLCKAKRLPSASKLLLS 413
           +    + K  PS ++ L+ 
Sbjct: 419 IQGFLQHKD-PSMARQLVE 436



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 178/367 (48%), Gaps = 7/367 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P +V ++ L +   R       + L  E+  +GI  D+ S + L++C   L + D    V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
              ++   L P   TF  +LNGLC     D  + ++  +   G  P + TYN++I  L K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +G+   A   LK++   G  PN + Y+T++   C R +  +    +   M  KG T + +
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE-ARSVFDLMVSKGCTPNVY 238

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y +++  + KI R++EA   +++ +  G+  DIV++ T+I+  C+ G+  AA  L   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G   +  T+ +L+DGLCK GN++ A    + M +     NL  Y  ++D L K GKI
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
                +F  +  +    + +TY+++V  LCK   +  A KL     + G    K A   +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418

Query: 430 VDG-LRH 435
           + G L+H
Sbjct: 419 IQGFLQH 425



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T LLN      C   ++++   +  D +  G+ P+V TYN++I++  +    +     L 
Sbjct: 136 TTLLN----GLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLK 191

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M + G  P+VV Y++LI G      +  +  + D M+  G  P+V++Y SLM+   ++ 
Sbjct: 192 QMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIE 251

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + +EA ++  + +   L P   TF  +++GLC+      A ++FR +  HG  P ++TY 
Sbjct: 252 RIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYG 311

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +L+ GLCK G L  A  + +E+  S   PN + YT ++    +  K K G E+ S +  +
Sbjct: 312 VLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDE 371

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   + + Y  ++ A  K G + EA     +M  DG   D  +YN +I  + +      A
Sbjct: 372 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMA 431

Query: 307 YLLLDEMEKQGFECDKYTHTILID 330
             L++EM  +GF  D  T  +L D
Sbjct: 432 RQLVEEMVNRGFSADAATRALLND 455



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 39/361 (10%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A   F+ M+     PC   F+ + + + +  + +  + + + ++  G   ++ + +IL
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I   C   R+     +L ++   G  P+ +T+TT++       K    + +   M  +G 
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-------------- 294
             + + Y  +I +  K G+  EA  +++QM   G   ++V+Y+TLI              
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 295 ---------------------NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
                                N YCK  ++E A  LLDE  ++G   D  T T +I GLC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VKDSFT 390
           +AG    A+    Y+   G   N+  Y  ++D L K G ++ A  +F+ M+   VK +  
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 391 -YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            Y+ ++ +LCK  ++    +L    +  G++       A+V  L   G   EA K+  K+
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 450 R 450
            
Sbjct: 404 E 404


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 202/433 (46%), Gaps = 50/433 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +  F K  ++E+A     D  R G      ++N LI+ YC+   FD  + + + M  
Sbjct: 314 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 373

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLD---EMLEMGIPPDVWSYNSLMHCLFQLGK 127
           AGI P   TYN  I          C    +D   E+L     PDV SYN+LMH   ++GK
Sbjct: 374 AGIYPTTSTYNIYICAL-------CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGK 426

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA+ +F D+  GD+ P   T+N +++GLC++   + A R+   +      P+++TY  
Sbjct: 427 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 486

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR----NRKYKLGLEILSA- 242
           L+KG  K G L  A  +  E+   G  P+   YTT      R    ++ ++L  E+++  
Sbjct: 487 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 546

Query: 243 ---------------------------MKRK----GYTFDGFGYCTVIAAFVKIGRLKEA 271
                                       +RK    G   D   Y TVI  +++ G+ K A
Sbjct: 547 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 606

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            +  ++M+   +   +++Y  LI  + K G+LE A+    EM+K+G   +  TH  L+ G
Sbjct: 607 RNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 666

Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-D 387
           +CKAGNI  A  +L  M + G   N  +Y  ++ +     K +  + +++ M   E++ D
Sbjct: 667 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 726

Query: 388 SFTYSSMVHNLCK 400
            +T+ ++  +L K
Sbjct: 727 GYTHRALFKHLEK 739



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   NI +C  C   R++ A  ++         PDVV+YN L+  Y +   F     + 
Sbjct: 379 TTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLF 434

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + +R   I P +VTYN+LI G   +  L  +  L +EM    I PDV +Y +L+    + 
Sbjct: 435 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 494

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G    A  V+ +M+   + P    +     G  +   +D A R+   +       P+L  
Sbjct: 495 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 554

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN+ I GLCK G L  A    +++   G  P+ +TYTT+++    N ++K+   +   M 
Sbjct: 555 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 614

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           RK        Y  +I    K GRL++A  Y  +M   GV+ +++++N L+   CK G ++
Sbjct: 615 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 674

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            AY  L +ME++G   +KY++T+LI   C
Sbjct: 675 EAYRYLCKMEEEGIPPNKYSYTMLISKNC 703



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 179/425 (42%), Gaps = 11/425 (2%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           IR G LP V   N+++         +    +   M E GI P V+T+N+++    +   L
Sbjct: 232 IRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL 291

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                +  EM    I     +YN L++   + GK +EA R   DM          +FN +
Sbjct: 292 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 351

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G CK    D+A  +   +   G  P   TYNI I  LC  GR+  AR +L  +     
Sbjct: 352 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA---- 407

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           AP+ ++Y T+M    +  K+     +   ++          Y T+I    + G L+ A  
Sbjct: 408 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 467

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             E+M T  +  D+++Y TL+  + K G L  A  + DEM ++G + D Y +T    G  
Sbjct: 468 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 527

Query: 334 KAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN----VFESMEVKDS 388
           + G+  K  RLH E +       +L  YN  +D L K G +  AI     +F    V D 
Sbjct: 528 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 587

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
            TY++++    +  +   A  L    L+   R+  S     V    H+   R  +  Q  
Sbjct: 588 VTYTTVIRGYLENGQFKMARNLYDEMLRK--RLYPSVITYFVLIYGHAKAGRLEQAFQYS 645

Query: 449 IRMAK 453
             M K
Sbjct: 646 TEMKK 650



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 173/390 (44%), Gaps = 9/390 (2%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
             +M   G  P V   N ++     + +++ +  + + M+E GI P V ++N+++   F+
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  +  ++++ +M   ++     T+NI++NG  KN   + A R    +++ GF     +
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           +N LI+G CK G    A  +  E+ ++G  P   TY   +       +     E+LS+M 
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 407

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                 D   Y T++  ++K+G+  EA+   + +    +   IV+YNTLI+  C+ G LE
Sbjct: 408 AP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 463

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L +EM  Q    D  T+T L+ G  K GN+  A    + M + G   +  AY    
Sbjct: 464 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 523

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               + G  D A  + E M   D        Y+  +  LCK   L  A +      + G+
Sbjct: 524 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 583

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                    V+ G   +G  + A+ +  ++
Sbjct: 584 VPDHVTYTTVIRGYLENGQFKMARNLYDEM 613



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 10/311 (3%)

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
           T+ S+    L   ++M+  G  P V + N ++  L      ++A+ V++ MI   + P  
Sbjct: 216 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 275

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            TFN ML+   K    +   +++  +++       VTYNILI G  K G++  AR    +
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 335

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  SG A    ++  +++   +   +     +   M   G       Y   I A    GR
Sbjct: 336 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 395

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + +A + +  M       D+VSYNTL++ Y K GK   A LL D++          T+  
Sbjct: 396 IDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 451

Query: 328 LIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           LIDGLC++GN++GA RL  E   ++ F  ++  Y  +V    K+G +  A  V++ M  K
Sbjct: 452 LIDGLCESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510

Query: 387 ----DSFTYSS 393
               D + Y++
Sbjct: 511 GIKPDGYAYTT 521



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 8/257 (3%)

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            K    +  L  F  + + GF+P +   NI++K L  +  +  A  + + + + G  P  
Sbjct: 216 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 275

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           IT+ T++  CF+    +   +I   MKR+   F    Y  +I  F K G+++EA  +   
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 335

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G  +   S+N LI  YCK+G  + A+ + DEM   G      T+ I I  LC  G 
Sbjct: 336 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 395

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSS 393
           I  AR  L  M       ++ +YN ++    K GK   A  +F+ +   D      TY++
Sbjct: 396 IDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 451

Query: 394 MVHNLCKAKRLPSASKL 410
           ++  LC++  L  A +L
Sbjct: 452 LIDGLCESGNLEGAQRL 468



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + +  + + A  +  + +R  + P V+TY +LI  + +    +  +     M++ G+ P+
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           V+T+N+L+ G  +   +  +   L +M E GIPP+ +SY  L+  +C F+  K +E  ++
Sbjct: 657 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFE--KWEEVVKL 714

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKN 160
           +++M+  ++ P   T   +   L K+
Sbjct: 715 YKEMLDKEIEPDGYTHRALFKHLEKD 740


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 35/397 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  + N  +   CK    E+A  ++ + +  G+ P+V++Y  +I+A     + +    +L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL--- 122
            +M   G SP++ T+ SLI G         +LD  D M+  G+ P+V +YN+LMH L   
Sbjct: 305 AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364

Query: 123 --------------------------------FQLGKPDEANRVFQDMICGDLTPCTATF 150
                                            + G  D A+ V+  MI     P    +
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
             M++ LC+N   + A  +   +Q     P  VT+N  IKGLC +GR+  A  +  ++G+
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG  PN  TY  ++    ++R++     ++  M+ +G   +   Y T+I  +   G L E
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A + + +MV  G + D ++ N +I+ YCK+GK+  A  L+D +    +  D   +T LI 
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           G+C    ++ A ++L  M   G   N+  +N +V  L
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 189/410 (46%), Gaps = 9/410 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           + + CK  ++++A  +      +   P V  YN LI+  C+  +F+  + +L+ M   GI
Sbjct: 223 ISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGI 277

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+V++Y ++I   +    +  SL +L +M   G  P++ ++ SL+   F  G   EA  
Sbjct: 278 DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALD 337

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            +  MI   + P    +N +++GLC  R   +A+ +F  ++ +G  P + TY+ LI G  
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYA 397

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG L  A  +   +   G  PN + YT ++    RN  +     ++  M+ +    +  
Sbjct: 398 KAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + T I      GR+  A    +QM   G   +  +YN L++   K+ +   A+ L+ +M
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E +G E +  T+  +I G C AG +  A   L  M   G   +    N ++D   K GK+
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + AI + + +       D   Y+S++  +C    +  A   L   L  G+
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 34/410 (8%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +TY M+I+        D    +L +M+  GIS     + S+I    R      +L     
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M +  + P V  YN ++  L    +    N ++ +M    + P   T+NI+L  LCKN  
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-------------------- 202
            D A ++   +   G  P+ V+Y  LI  LCK G+++ AR                    
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 203 ----------WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
                      +L E+ + G  PN I+YTTI+         +L L +L+ M  +G + + 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             + ++I  F   G   EA D+ ++M+ +GV  ++V+YN L++  C +  L  A  + ++
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           ME  G   +  T++ LIDG  KAG++ GA     +M   G   N+ AY C+VD L ++  
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            + A  + E+M+V+    ++ T+++ +  LC + R+  A K+      SG
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG 486



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 195/484 (40%), Gaps = 69/484 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + ++ N  +      NR +    I  +  + G+ P+V TYN+L+ A C+    D  + 
Sbjct: 143 KPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHK 202

Query: 64  ILNRMREAGISPDVVT------------------------------YNSLIAGATRNSLL 93
           +L  M   G  PD V+                              YN+LI G  +    
Sbjct: 203 LLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTF 262

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  LLDEM+  GI P+V SY ++++ L   G  + +  V   M     +P   TF  +
Sbjct: 263 EEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSL 322

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G      +  AL  +  + + G VP +V YN L+ GLC    L  A  +  ++  +G 
Sbjct: 323 IKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC 382

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN  TY+ ++                          DG+          K G L  A++
Sbjct: 383 CPNVRTYSALI--------------------------DGYA---------KAGDLDGASE 407

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M+T G   ++V+Y  ++++ C+      AY L++ M+ +    +  T    I GLC
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
            +G +  A    + M   G   N   YN ++D L KD +   A  + + ME +    +  
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TY+++++  C A  L  A +LL   +  G +        V+D     G    A ++  ++
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587

Query: 450 RMAK 453
              K
Sbjct: 588 SAGK 591



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 35/261 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + KA  L+ A  +    I  G  P+VV Y  ++D  C+   F+  Y ++  M+     P+
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ------------ 124
            VT+N+ I G   +  +  ++ + D+M   G  P+  +YN L+  L +            
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515

Query: 125 -----------------------LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                                   G   EA  +   M+     P   T NI+++  CK  
Sbjct: 516 DMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQG 575

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             + A+++   L    + P+++ Y  LI G+C    +  A   L+ +   G +PN  T+ 
Sbjct: 576 KVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWN 635

Query: 222 TIMKCCFRNRKYKLGLEILSA 242
            +++  F N  +   ++ L A
Sbjct: 636 VLVRHLFSNMGHSGAVQFLDA 656



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 60/114 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C A  L +A  ++   +  G  PD +T N++IDAYC+    +    +++R+  
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               PD++ Y SLI+G   +  +  ++  L  ML  GI P+V ++N L+  LF 
Sbjct: 590 GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS 643


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 191/390 (48%), Gaps = 18/390 (4%)

Query: 25  KAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
            A A+  D  RL +     T+N+++   C          +L +M      P+ VTYN++I
Sbjct: 99  PAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVI 154

Query: 85  AGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC-GD 142
           AG      +  +L+++ EM E G I PD ++Y +L+    ++G+ ++A +VF +M+  G+
Sbjct: 155 AGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGE 214

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
           + P    +N ++ G C     D AL+    + + G    + TYN+L+  L   GR   A 
Sbjct: 215 VAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAY 274

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L+E+  +G +P+  TY  ++    +    K  LE+   M RKG       Y ++I AF
Sbjct: 275 AVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAF 334

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            + G+++E     +  V  G++ D+V YN LIN +C  G +E A+ ++ EMEK+    D 
Sbjct: 335 SRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDD 394

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  LI G C  G +  AR  ++ M K G   +L         L K+G+ D A N+ + 
Sbjct: 395 VTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG--------LCKNGQGDDAENLMKE 446

Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSAS 408
           M  K    D  TY S++  L       SA+
Sbjct: 447 MVGKGITPDDSTYISLIEGLTTVDEQMSAA 476



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 12/245 (4%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILS 241
            T+NI+++ LC  G+   A  +L+++      PNA+TY T++   C R R  +  LE++ 
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGR-VQAALEVMR 171

Query: 242 AMK-RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCK 299
            M+ R G   D + Y T+I+ + KIGR+++A    ++M+T G V    V YN LI  YC 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            GKL+ A    ++M ++G      T+ +L+  L   G    A   LE M + G   ++  
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++   K+G    A+ VFE M  K     + TY+S+++   +  ++    +L    +
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV 351

Query: 416 KSGVR 420
           K G+R
Sbjct: 352 KKGIR 356



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 8/268 (2%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  + N  +  +C   +L+ A     D ++ GV   V TYN+L+ A          Y +L
Sbjct: 218 SAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVL 277

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M+  G+SPDV TYN LI G  +      +L++ +EM   G+     +Y SL++   + 
Sbjct: 278 EEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRK 337

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  E +R+F+  +   + P    +N ++N  C     + A  +   ++K    P+ VTY
Sbjct: 338 GQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTY 397

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N LI+G C  GRL  AR ++ E+   G  P+       +  C +N +      ++  M  
Sbjct: 398 NTLIRGFCLLGRLDEARGLIDEMTKRGIQPD-------LGLC-KNGQGDDAENLMKEMVG 449

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           KG T D   Y ++I     +     A D
Sbjct: 450 KGITPDDSTYISLIEGLTTVDEQMSAAD 477


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 212/459 (46%), Gaps = 35/459 (7%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            +I +   CK+  ++ A  +  +  + G+LPD  TY ++I   C+    D  Y + ++M+
Sbjct: 199 FSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMK 258

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-------GIPPDVWSYNSLMHCL 122
           ++G+ PD VT N+L+ G        C LD +DE   +       G   DV  Y+ L+  L
Sbjct: 259 DSGVGPDFVTCNALLNGF-------CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGL 311

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           F+  + ++   +++ MI  ++ P    + IM+ GL +     +AL +   + + G VP+ 
Sbjct: 312 FRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDT 371

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V YN+LIKG C  G L  AR +  E+      PN  TY+ ++    RN   +   EI + 
Sbjct: 372 VCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNE 431

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-----------VTDGVQ--LDIVS 289
           M++ G       + ++I    K G+L++A     +M           ++ G    LD  S
Sbjct: 432 MEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSAS 491

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
              ++   C  G +  AY +L ++   G     YT+ IL++G CK GN  GA      M 
Sbjct: 492 LQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQ 551

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
             G   +   Y  +++ L +  + + A  VF+ ME      D+  Y +M+  +C+   LP
Sbjct: 552 FKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELP 611

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
            A  L L  L++    ++S +   +  +     ++E +K
Sbjct: 612 RAFSLWLKYLRN----IRSQEDEAIKAIEGYFEKQEVEK 646



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 196/426 (46%), Gaps = 23/426 (5%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV TYNM++D   Q        T+  RM +    P+V T++ LI G  ++  +  +L L
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            DEM + GI PD ++Y  ++  L +  + D+A R+F  M    + P   T N +LNG C 
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D A  + R  +K G+V ++  Y+ LI+GL +A R    + + +++ +    P+   
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT +MK      K +  LE+L+ M   G   D   Y  +I  F  +G L EA     ++ 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                 ++ +Y+ LI+  C+ G    A  + +EMEK G      T   LIDGLCK G ++
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458

Query: 340 GARLHLEYMNKIGFDSNL--------------EAYNCIVDRLGKDGKIDHAINVFESMEV 385
            A L L Y  +IG + +L               +   +V++L   G I  A  +   M++
Sbjct: 459 KAHL-LFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRIL--MQL 515

Query: 386 KDS------FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
            DS      +TY+ +V+  CK      A KL       G+         +++GL      
Sbjct: 516 ADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQRE 575

Query: 440 REAKKI 445
            +A K+
Sbjct: 576 EDAYKV 581



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 186/392 (47%), Gaps = 17/392 (4%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            + +LI  Y +    D        MR+   +PDV TYN ++    + + L  +L +   M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +++   P+V +++ L+  L + G   +A  +F +M    + P   T+ ++++GLC+++  
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A R+F  ++  G  P+ VT N L+ G C   R+  A  +L+     G+  +   Y+ +
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           ++  FR ++Y+    +   M       D + Y  ++    + G++++A + + +M   GV
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D V YN LI  +C  G L  A  L  E+ +     +  T++ILI G+C+ G  + A+ 
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----------------VK 386
               M K+G   +   +N ++D L K G+++ A  +F  ME                 V 
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           DS +   MV  LC +  +  A ++L+    SG
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSG 519



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 191/416 (45%), Gaps = 30/416 (7%)

Query: 49  IDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
           ++ YCQ          L  ++  GI      +  LI    +  L   +++    M +   
Sbjct: 107 LELYCQ---------TLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDC 157

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
            PDV++YN ++  L Q      A  V+  M+  +  P  ATF+I+++GLCK+    +AL 
Sbjct: 158 TPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALH 217

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CC 227
           +F  + + G +P+  TY ++I GLC++ R+  A  +  ++ DSG  P+ +T   ++   C
Sbjct: 218 LFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFC 277

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
             +R  +    +L   ++ GY  D  GY  +I    +  R ++      +M+ D V+ D+
Sbjct: 278 MLDRVDE-AFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLE 346
             Y  ++    + GK+  A  LL+EM + G   D   + +LI G C  G +  AR L LE
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLE 396

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
                 F  N++ Y+ ++  + ++G    A  +F  ME       + T++S++  LCK  
Sbjct: 397 ISRHDCF-PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTG 455

Query: 403 RLPSA------------SKLLLSCLKSGVRILKSAQ-KAVVDGLRHSGCRREAKKI 445
           +L  A              L L   +    +L SA  + +V+ L  SG   +A +I
Sbjct: 456 QLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRI 511



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 178/401 (44%), Gaps = 36/401 (8%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K    L  I +    +A ++  A  ++ +    GV+PD V YN+LI  +C         +
Sbjct: 333 KPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARS 392

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   +      P+V TY+ LI+G  RN L   + ++ +EM ++G  P   ++NSL+  L 
Sbjct: 393 LQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLC 452

Query: 124 QLGKPDEANRVFQDMICGDLTPC--------------TATFNIMLNGLCKNRYTDNALRM 169
           + G+ ++A+ +F  M  G   P               +A+   M+  LC +     A R+
Sbjct: 453 KTGQLEKAHLLFYKMEIGR-NPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRI 511

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
              L   G  P + TYNIL+ G CK G    A  + +E+   G +P+ +TY T++    R
Sbjct: 512 LMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLR 571

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD-YMEQMVTDGVQLDIV 288
            ++ +   ++   M++ G T D   Y T++    +   L  A   +++ +     Q D  
Sbjct: 572 FQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQED-- 629

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
                I  Y ++ ++E A   L EM+ +  + D   + I + GLC+   + G  L +  +
Sbjct: 630 EAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRV-GEALKIFLI 688

Query: 349 NKIGFDSNLEAYNCIVDR---------LGKDGKIDHAINVF 380
                   LE Y  ++           L K+G +D AI+VF
Sbjct: 689 --------LEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVF 721



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 8/206 (3%)

Query: 236 GLEI----LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
           GLE+    L A+K  G       +  +I  ++K+G   +A +    M       D+ +YN
Sbjct: 106 GLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYN 165

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
            ++++  ++  L  A  +   M K     +  T +ILIDGLCK+GN+K A    + M + 
Sbjct: 166 MILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQR 225

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 407
           G   +   Y  ++  L +  ++D A  +F+ M+      D  T +++++  C   R+  A
Sbjct: 226 GILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEA 285

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGL 433
             LL    K G  +       ++ GL
Sbjct: 286 FSLLRLFEKDGYVLDVRGYSCLIRGL 311


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 5/408 (1%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           + L V   V +  +++D  C+    + G  +++ +   G+  +VVTYN+ I G  +   L
Sbjct: 217 VNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDL 276

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
               ++L  M + G+  +V +Y  L+H    +GK +EA R+F++M    +      +  +
Sbjct: 277 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 336

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  C++     AL +F  +   G +P   TY  LI G+CKAG++  A+ ++ E+   G 
Sbjct: 337 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 396

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
             N + + T++     +      L +   M++KG   D F Y ++ +   K+ R  EA  
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 456

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  MV  GV  + +S+ TLI++YCKEG    A  +  EME++G   +  T+ +LIDG  
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 516

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K GN+K A    + +   G   ++     ++     DGK+D A+ +F+ M     V +  
Sbjct: 517 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 576

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           TY++M+  L K  R   A KL     ++G+    +   ++V  L HS 
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL-HSA 623



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L I +   CK   +E    ++ +    GV  +VVTYN  I+ Y + +       IL  M 
Sbjct: 228 LTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME 287

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G++ +VVTY  LI G +    +  +  L +EM E GI  DV+ Y S++ C  + G   
Sbjct: 288 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +F +M    L P   T+  +++G+CK    + A  +   +Q  G     V +N LI
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY 248
            G C++G +  A  +   +   G   +   Y +I    C  NRK +    +L +M  +G 
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE-AKGLLFSMVERGV 466

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +   + T+I  + K G   EA     +M   G   +I++YN LI+ Y K G ++ A+ 
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L DE+E +G   D YT T LI G C  G +  A    + M + G   N+  Y  ++  L 
Sbjct: 527 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLS 586

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
           KDG+ + A  +++ M+      D   YSS+V +L  A+
Sbjct: 587 KDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 177/445 (39%), Gaps = 39/445 (8%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +++L   Y     F         M + G   D  +    +    R   +   L     M+
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
            + +   V+S   ++  L + G  +   ++  ++    +     T+N  + G  K     
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
               +   ++K G    +VTY +LI G    G++  A+ + +E+ + G   +   YT+I+
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
            C  R+   K  L +   M  KG       Y  +I    K G+++ A   + +M   G+ 
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH------------------- 325
           L+ V +NTLI+ YC+ G ++ A  L   MEK+G E D + +                   
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457

Query: 326 ----------------TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
                           T LID  CK GN   A+     M + G   N+  YN ++D   K
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G +  A  + + +E    + D +T +S++H  C   ++  A KL     + G+      
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 577

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
             A++ GL   G   EA K+  +++
Sbjct: 578 YTAMISGLSKDGRSEEAFKLYDEMK 602



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 110/220 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + N  +  +C++  +++A  + +   + G+  DV  YN +    C+    D    +
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M E G+SP+ +++ +LI    +      +  +  EM E G  P++ +YN L+    +
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G   EA+++  ++    L P   T   +++G C +   D AL++F  + + G VP +VT
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 577

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           Y  +I GL K GR   A  +  E+ ++G  P+   Y++++
Sbjct: 578 YTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 199/414 (48%), Gaps = 11/414 (2%)

Query: 12  ICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I +   CK   +E A    + +   GI++ V P    YN LI+ YC+  S D    +L+ 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSG 433

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G++P   +Y+ LIAG  RN  LS  ++L  EM E GI  + +++ +L++   +  K
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA R+F  MI  ++ P   TFN+M+ G C       A +++  + + G  P+  TY  
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLC    +  A   + +L +S    N  + T ++   FR  ++     +   M  +G
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 613

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   +  ++ A +K    +++     +M   GV+ D + Y  +I+   KE  +  A 
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
              D+M   G+  +  THT+LI+ LCK+G +  A L  + M       N   YNC +D  
Sbjct: 674 NCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733

Query: 368 GKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +G ++ A ++  +M    +    +++ ++  LCKA ++  A  L+    +SG
Sbjct: 734 ATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 195/418 (46%), Gaps = 4/418 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG++P+V  YN LID  C+   FD    +   M   G+ P+ VTY  LI    +  ++  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M + GI   V+ YNSL++   + G  D A  +   M+   LTP  A+++ ++ 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+N    + + + R + + G      T+  LI G CK  ++  A  +  ++ DS   P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T+  +++        +   ++   M   G   D + Y ++I+       + +A +++
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             +      L+  S   L+  + +EG+    Y L DEM  +G + D  + TI++    K 
Sbjct: 572 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
            + + + +    M + G   +   Y C++D L K+  +  A+N ++ M V     ++ T+
Sbjct: 632 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTH 691

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +++NLCK+  L SA  L    L   V   K      +D     G   +AK + S +
Sbjct: 692 TVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 168/338 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N+ +   CK  R+++A  +    + +GV  D VTY  L+  +C+    +    
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I + M   G  P     + +I    +  L+  +  L  ++ ++G+ P+V++YN+L+  L 
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+A+R+F++M    L P   T+ I+++ LCK    ++AL +F  ++  G    + 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN LI G CK G L  AR +L  +   G  P A +Y+ ++    RN      +E+   M
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G  ++ + +  +I  F K  ++ EA    ++M+   V  + V++N +I  YC  G +
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
             A+ L D+M + G + D YT+  LI GLC    +  A
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 18/389 (4%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ GV  D   Y   I AYC+  + D    ++ RM   G+    V YN L+ G  +N  +
Sbjct: 190 LQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRV 249

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++++ + M+ +G+  D  +Y +L++   ++ + + A R+  DMI     P  A  + M
Sbjct: 250 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 309

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ L K    + A  +   L   G VP +  YN LI  LCK  R   A  + KE+   G 
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY  ++    +    +  L +   M+ KG     + Y ++I  + K G L  A  
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  MV +G+     SY+ LI   C+ G L +   L  EM ++G   + YT T LI+G C
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 489

Query: 334 KAGNIKGARLHLEYM-------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 385
           K   +  A    + M       N++ F+  +E Y C+V      G I  A  +++ M   
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEM 542

Query: 386 ---KDSFTYSSMVHNLCKAKRLPSASKLL 411
               D++TY S++  LC    +  A++ +
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 41/403 (10%)

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI+ +  T + ++    +    + + DL D+ML+ G+  D + Y + +    +    D 
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      +N+++ GLCKN     A+ +   +   G   + VTY  L+ 
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 191 GLCKAGRLRTARWILKE-----------------------------------LGDSGHAP 215
           G C+   L  A  I  +                                   LGD G  P
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y  ++    +N ++     +   M  +G   +   Y  +I A  K G +++A    
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   G+++ +  YN+LIN YCK+G L+ A  LL  M K+G      +++ LI GLC+ 
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 456

Query: 336 GNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
           G++     LH E M + G   N   +  +++   KD K+D A  +F+ M     + +  T
Sbjct: 457 GDLSSCMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           ++ M+   C    +  A +L    ++ G++      ++++ GL
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 69/385 (17%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  ++++A  +    I   V+P+ VT+N++I+ YC   +    + + ++M E G+ PD
Sbjct: 488 FCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 547

Query: 77  VVTYNSLIAGAT-----------------------------------RNSLLSCSLDLLD 101
             TY SLI+G                                     R    + +  L D
Sbjct: 548 NYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWD 607

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM   G+  D+ S+  +++   +    +++  +F++M    + P    +  M++ L K  
Sbjct: 608 EMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEE 667

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------- 208
               AL  +  +   G+ P  VT+ +LI  LCK+G L +A  + KE+             
Sbjct: 668 NMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727

Query: 209 ---------GD------------SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
                    GD             GH  + +++  ++K   +  K +  ++++S +   G
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           ++ D   Y T+I    K+G + +A +   +M+  G++ D+V+YN  I      G+ + A 
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 308 LLLDEMEKQGFECDKYTHTILIDGL 332
            +   M + G + +  T+  L+ G+
Sbjct: 848 GIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 1/244 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL      I V    K +  EK+  +  +    GV PD + Y  +IDA  +  +      
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             ++M   G SP+ VT+  LI    ++  L  +  L  EML   + P+ ++YN  +    
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  ++A  +   M+ G L     +FNI++ GLCK      A+ +   + + GF P+ +
Sbjct: 735 TEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 793

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +Y+ +I  LCK G +  A  +  E+   G  P+ + Y   ++ C  + +    L I + M
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 244 KRKG 247
            R G
Sbjct: 854 IRSG 857



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +   CK+  L  AE +  + +   VLP+  TYN  +D +      +    + + M + 
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            ++  +V++N LI G  +   +  ++DL+ ++ E G  PD  SY++++H L ++G  ++A
Sbjct: 753 HLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 811

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ +M+   L P    +NI +     +  +D AL ++  + + G  P   TY  L+ G
Sbjct: 812 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871

Query: 192 L---------CKAGRLRTARWILKELGDSGH 213
           +         C  G  +  +  + EL DS H
Sbjct: 872 ISLMLHYDFSCFRGTKQYIQISVYELMDSTH 902



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG   N  T + I+    + R++ L  ++   M + G   D + Y   I A+ +   L  
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + +M ++GV+   V YN L+   CK  +++ A  + + M   G   D+ T+  L+ 
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 331 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 355
           G C+   ++ A      M ++GF                                     
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+ AYN ++D+L K+ + D A  +F+ M  +    +  TY+ ++H LCK   +  A  L 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
                 G+++      ++++G    G    A+ + S
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CKA ++++A  ++      G  PD ++Y+ +I   C+    +  + + N M 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
             G+ PDVV YN  I     +     +L +   M+  G+ P+  +Y +L+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 205/405 (50%), Gaps = 8/405 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I + ++   + +E+A     D +  G  PDVVT++ +I+  C+      G  +L  M E
Sbjct: 231 TILISSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEE 287

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+ VTY +L+    +      +L L  +M+  GIP D+  Y  LM  LF+ G   E
Sbjct: 288 MGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLRE 347

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A + F+ ++  +  P   T+  +++GLCK     +A  +   + +    P +VTY+ +I 
Sbjct: 348 AEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMIN 407

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G L  A  +++++ D    PN  TY T++   F+  K ++  E+   M+  G   
Sbjct: 408 GYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEE 467

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + +    ++    +IGR+KE    ++ MV+ GV LD ++Y +LI+++ K G  EAA    
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWA 527

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM+++    D  ++ +LI GL K G + GA    + M + G + ++  +N +++   K 
Sbjct: 528 EEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586

Query: 371 GKIDHAINVFESME---VKDSFTYSSMVHN-LCKAKRLPSASKLL 411
           G  +  + +++ M+   +K S    ++V   LC+  ++  A  +L
Sbjct: 587 GDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDIL 631



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 204/440 (46%), Gaps = 36/440 (8%)

Query: 36  LGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
            GV+PD+  +N LI  +    +  D    + ++M   G+SPDV   N LI    +   LS
Sbjct: 87  FGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLS 146

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++ LL   +   I  D  +YN+++  L + G  DEA +   +M+   + P T +FN ++
Sbjct: 147 FAISLLRNRV---ISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLI 203

Query: 155 NGLCK-----------------NRYTDNAL-----------RMFRGLQKHGFVPELVTYN 186
           +G CK                 N  T   L             +R +   GF P++VT++
Sbjct: 204 DGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFS 263

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I  LCK G++     +L+E+ + G  PN +TYTT++   F+ + Y+  L + S M  +
Sbjct: 264 SIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVR 323

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  ++A   K G L+EA    + ++ D    ++V+Y  L++  CK G L +A
Sbjct: 324 GIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSA 383

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             ++ +M ++    +  T++ +I+G  K G ++ A   +  M       N   Y  ++D 
Sbjct: 384 EFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDG 443

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K GK + A  + + M +    ++++   ++V++L +  R+     L+   +  GV + 
Sbjct: 444 LFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503

Query: 423 KSAQKAVVDGLRHSGCRREA 442
                +++D     G    A
Sbjct: 504 HINYTSLIDVFFKGGDEEAA 523



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 187/390 (47%), Gaps = 14/390 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ + + CK  +L  A +++ + +   +  D VTYN +I   C+    D  Y  L+ M 
Sbjct: 132 LNVLIHSLCKVGQLSFAISLLRNRV---ISVDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + GI PD V++N+LI G  +    + +  L+DE+ E+    ++ ++  L+   + L   +
Sbjct: 189 KIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISEL----NLITHTILISSYYNLHAIE 244

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA   ++DM+     P   TF+ ++N LCK+        + R +++ G  P  VTY  L+
Sbjct: 245 EA---YRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLV 301

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L KA   R A  +  ++   G   + + YT +M   F+    +   +    +      
Sbjct: 302 DSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEV 361

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++    K G L  A   + QM+   V  ++V+Y+++IN Y K+G LE A  L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSL 421

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           + +ME Q    + +T+  +IDGL KAG  + A    + M  IG + N    + +V+ L +
Sbjct: 422 MRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKR 481

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMV 395
            G+I     + + M  K    D   Y+S++
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDHINYTSLI 511



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 194/412 (47%), Gaps = 36/412 (8%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMGIPPDVWSYNSLMHCLF 123
           L+ M   G+ PD+  +NSLI     N L+   + L+  +M+  G+ PDV++ N L+H L 
Sbjct: 81  LSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLC 140

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+   A  + ++ +   ++  T T+N +++GLC++   D A +    + K G +P+ V
Sbjct: 141 KVGQLSFAISLLRNRV---ISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTV 197

Query: 184 TYNILIKGLCKAGRLRTARWILKELGD----------------------------SGHAP 215
           ++N LI G CK G    A+ ++ E+ +                            SG  P
Sbjct: 198 SFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDP 257

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+++I+    ++ K   G  +L  M+  G   +   Y T++ +  K    + A    
Sbjct: 258 DVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALY 317

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            QMV  G+ +D+V Y  L+    K G L  A      + +     +  T+T L+DGLCKA
Sbjct: 318 SQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKA 377

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G++  A   +  M +     N+  Y+ +++   K G ++ A+++   ME    V + FTY
Sbjct: 378 GDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTY 437

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            +++  L KA +   AS++       GV        A+V+ L+  G  +E K
Sbjct: 438 GTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 198/433 (45%), Gaps = 5/433 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  L  AE II   +   V P+VVTY+ +I+ Y +    +   +++ +M +  + P+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPN 433

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY ++I G  +      + ++  EM  +G+  + +  ++L++ L ++G+  E   + +
Sbjct: 434 GFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   +T     +  +++   K    + AL     +Q+     ++V+YN+LI GL K G
Sbjct: 494 DMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFG 553

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A W  K + + G  P+  T+  +M    +   ++  L++   MK  G         
Sbjct: 554 KV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICN 612

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            V+    + G++KEA D ++QM+   +  ++ +Y   +++  K  + +A +   + +   
Sbjct: 613 IVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSY 672

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +  +  +  LI  LCK G  + A + +E M   GF  +   +N ++        +  A
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKA 732

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           ++ +  M       +  TY++++  L  A  +    K L      G+R       A++ G
Sbjct: 733 LSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISG 792

Query: 433 LRHSGCRREAKKI 445
               G ++E+  I
Sbjct: 793 QAKIGNKKESMTI 805



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 147/298 (49%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+ T+N+++++  +   F+    + ++M+  GI P ++  N ++        +  +
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEA 627

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +D+LD+M+ M I P++ +Y   +    +  + D   +  + ++   +      +N ++  
Sbjct: 628 IDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIAT 687

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK   T  A  +   ++  GFVP+ VT+N L+ G      +  A      + ++G +PN
Sbjct: 688 LCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPN 747

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY TI++        K   + LS MK +G   D F Y  +I+   KIG  KE+     
Sbjct: 748 VATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYC 807

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +M+ DG+     +YN LI+ + K GK+  A  L+ EM K+    +  T+  +I GLCK
Sbjct: 808 EMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 138/328 (42%), Gaps = 48/328 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  + NI V   C+  ++++A  I+   + + + P++ TY + +D   +    DA + 
Sbjct: 605 KPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFK 664

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               +   GI      YN+LIA   +  +   +  ++++M   G  PD  ++N+LMH  F
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYF 724

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                 +A   +  M+   ++P  AT+N ++ GL          +    ++  G  P+  
Sbjct: 725 VGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDF 784

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI G  K G  + +  I  E+   G  P   TY  +                    
Sbjct: 785 TYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVL-------------------- 824

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK---- 299
                          I+ F K+G++ +AT+ M++M    V  +  +Y T+I+  CK    
Sbjct: 825 ---------------ISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTH 869

Query: 300 ---EGKLEAAYL-----LLDEM-EKQGF 318
              E   +A YL     LL EM E++G+
Sbjct: 870 PEVEWNKKAMYLAEAKGLLKEMIEEKGY 897



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 126/311 (40%), Gaps = 69/311 (22%)

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A R    +   G VP+L  +N LI      G +              H   ++ Y+ ++ 
Sbjct: 77  AARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLV--------------HDQVSLVYSKMIA 122

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
           C                    G + D F    +I +  K+G+L  A   +   V   + +
Sbjct: 123 C--------------------GVSPDVFALNVLIHSLCKVGQLSFAISLLRNRV---ISV 159

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D V+YNT+I+  C+ G  + AY  L EM K G   D  +   LIDG CK GN   A+  +
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALV 219

Query: 346 EYMNKI----------------------------GFDSNLEAYNCIVDRLGKDGKIDHAI 377
           + ++++                            GFD ++  ++ I++RL KDGK+    
Sbjct: 220 DEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGG 279

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            +   ME      +  TY+++V +L KAK    A  L    +  G+ +       ++ GL
Sbjct: 280 LLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGL 339

Query: 434 RHSGCRREAKK 444
             +G  REA+K
Sbjct: 340 FKAGDLREAEK 350



 Score = 45.1 bits (105), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 8/162 (4%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-EAAYLLLDEM 313
           + T+   ++  GRL  A   +  M T GV  D+  +N+LI+ +   G + +   L+  +M
Sbjct: 61  FHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKM 120

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G   D +   +LI  LCK G +  A + L     I  D+    YN ++  L + G  
Sbjct: 121 IACGVSPDVFALNVLIHSLCKVGQLSFA-ISLLRNRVISVDT--VTYNTVISGLCEHGLA 177

Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           D A      M     + D+ ++++++   CK      A  L+
Sbjct: 178 DEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALV 219


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 197/423 (46%), Gaps = 6/423 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G L T   NI +       +   A  ++ +    GV PDVVTYN  I A  +   +    
Sbjct: 106 GSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAM 165

Query: 63  TILNRM--REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            +L +M     GI+PDVVTYNS IA  +       ++DLL++M+  G+PP++ +YNS + 
Sbjct: 166 DLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIG 225

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +  + +EA  + +++I     P T T+N +++   K      A+ +   +  +    
Sbjct: 226 ACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPA 285

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++++Y+ +I    +  R + A  +L+++   G +PN I+Y + +  C +  ++K  L++L
Sbjct: 286 DVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLL 345

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M   G       Y +  AA    GR  EA + +++M   G+  + +SYN+ ++   K 
Sbjct: 346 REMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKG 405

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ E A  LL  M   G + D  +    ID   +    + A   L  M   G   N+  Y
Sbjct: 406 GQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITY 465

Query: 361 NCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
           N  ++  G+  +   A+ +F  M  +    +  TY+SM+    K ++   A +LL     
Sbjct: 466 NSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA 525

Query: 417 SGV 419
            GV
Sbjct: 526 RGV 528



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 197/418 (47%), Gaps = 4/418 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           STR  N  +    K  R  +A  ++   +   +  DV++Y+ +I A  +   +     +L
Sbjct: 251 STRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLL 310

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +MR  G+SP+V++YNS I    +      +LDLL EM  +G+ P V SYNS        
Sbjct: 311 EQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVN 370

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+  EA  + ++M    + P T ++N  L+   K    + A+++ RG+   G  P+++++
Sbjct: 371 GRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISF 430

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N  I    +  +  TA  +L+E+  +G  PN ITY + ++ C R+ +++  + +   M  
Sbjct: 431 NSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPT 490

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G + +   Y ++I A  K  + + A   +  M   GV  D++SYN+ I    K  + E 
Sbjct: 491 RGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWEL 550

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  LL  M  +G + D  ++   +    K+G  + A   L+ M  +G   N  +Y   + 
Sbjct: 551 ALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIH 610

Query: 366 RLGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             GK  + D A+ + + M+   +     TYS+ +    K  R   A  LL    + G+
Sbjct: 611 ACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGL 668



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 184/410 (44%), Gaps = 4/410 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PDVVTYN  I A      +     +L +M   G+ P+++TYNS I    +      +
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +DLL+E++E G PP   +YN ++    + G+  EA  +   M+  D+     +++ ++  
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             + R    A+ +   ++  G  P +++YN  I    K  R + A  +L+E+   G  P 
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            I+Y +    C  N ++   LE+L  M  +G   +   Y + + A  K G+ ++A   + 
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M T G   DI+S+N+ I+   +  + E A  LL EM   G   +  T+   I+   ++ 
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
             + A      M   G   N+  YN ++D   K  + + A+ +   M  +    D  +Y+
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYN 536

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
           S +    K ++   A +LL      G +    +  + V     SG  REA
Sbjct: 537 SAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREA 586



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 197/444 (44%), Gaps = 4/444 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K  R E+A  ++ + I  G  P   TYN +IDA  +   +     +L +M  
Sbjct: 221 NSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLT 280

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  DV++Y+S+IA   R      ++DLL++M   G+ P+V SYNS +    +  +  E
Sbjct: 281 NDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKE 340

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    L P   ++N        N     AL + + +   G  P  ++YN  + 
Sbjct: 341 ALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALD 400

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K G+   A  +L+ +   G  P+ I++ + +  C R ++++  +E+L  M   G T 
Sbjct: 401 ACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTP 460

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y + I A  +  R +EA     +M T G+  ++V+YN++I+   K  + E A  LL
Sbjct: 461 NVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLL 520

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M  +G   D  ++   I+   K    + A   L+ M   G   ++ +YN  V    K 
Sbjct: 521 TGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKS 580

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G+   A+ + + M       ++ +Y + +H   K ++   A ++L      G        
Sbjct: 581 GRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITY 640

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
            A +D     G  +EA  + + +R
Sbjct: 641 SAAIDACAKQGRWKEAVDLLTDLR 664



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 184/405 (45%), Gaps = 4/405 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +       R ++A  ++   +  GV P+++TYN  I A  +   ++    +L  + E
Sbjct: 186 NSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIE 245

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P   TYN +I    +      ++DLL +ML   IP DV SY+S++    +  +  E
Sbjct: 246 QGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKE 305

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + M    ++P   ++N  ++   K      AL + R +   G VP +++YN    
Sbjct: 306 AMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATA 365

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
                GR   A  +LKE+   G APN I+Y + +  C +  +++  +++L  M   G   
Sbjct: 366 ACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDP 425

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + + I A  +  + + A + + +M T G+  ++++YN+ I    +  + + A  L 
Sbjct: 426 DIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLF 485

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EM  +G   +  T+  +ID   K    + A   L  M   G   ++ +YN  ++  GK 
Sbjct: 486 REMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKG 545

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            + + A+ + + M  +    D  +Y+S V    K+ R   A  LL
Sbjct: 546 EQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLL 590



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 166/354 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +    K +R ++A  ++ +   +G++P V++YN    A      +     +L  M  
Sbjct: 326 NSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPA 385

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P+ ++YNS +    +      ++ LL  M  +G  PD+ S+NS +    +  + + 
Sbjct: 386 QGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWET 445

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    LTP   T+N  +    ++     A+ +FR +   G  P +VTYN +I 
Sbjct: 446 AVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMID 505

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
              K  +   A  +L  +   G AP+ I+Y + ++ C +  +++L L++L  M  +G   
Sbjct: 506 ACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKP 565

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y + + A  K GR +EA   ++ M T G+  + VSY   I+   K  + + A  +L
Sbjct: 566 DIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRIL 625

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            EM+  G   +  T++  ID   K G  K A   L  + + G   + + Y  ++
Sbjct: 626 KEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVI 679



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 141/280 (50%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
            K  + EKA  ++     +G  PD++++N  IDA  +   ++    +L  M  AG++P+V
Sbjct: 403 AKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNV 462

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TYNS I    R++    ++ L  EM   G+ P+V +YNS++    +  + + A ++   
Sbjct: 463 ITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG 522

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M    + P   ++N  +    K    + AL++ +G+   G  P++++YN  +    K+GR
Sbjct: 523 MPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGR 582

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
            R A  +LK++   G  PN ++Y   +  C +  ++ + + IL  M+  G T +   Y  
Sbjct: 583 WREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSA 642

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            I A  K GR KEA D +  +   G+  D  +Y T+I+ +
Sbjct: 643 AIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 168/388 (43%), Gaps = 41/388 (10%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS------- 117
           L+  + +G S D  +YN  IA  +     + ++ LL EM   G+ PDV +YNS       
Sbjct: 98  LDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSK 157

Query: 118 ------LMHCLFQL------------------------GKPDEANRVFQDMICGDLTPCT 147
                  M  L Q+                        G+  EA  + + M+   + P  
Sbjct: 158 GGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNL 217

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N  +    K R  + A+ +   + + GF P   TYN +I    K GR   A  +L +
Sbjct: 218 ITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQ 277

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  +    + I+Y++++  C R R++K  +++L  M+ +G + +   Y + I A  K  R
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDR 337

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
            KEA D + +M T G+   ++SYN+        G+   A  LL EM  QG   +  ++  
Sbjct: 338 WKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNS 397

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
            +D   K G  + A   L  M+ +G D ++ ++N  +D  G+  + + A+ +   M    
Sbjct: 398 ALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAG 457

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLL 411
              +  TY+S +    ++ R   A  L 
Sbjct: 458 LTPNVITYNSAIEACGRSARWQEAMGLF 485



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 10/257 (3%)

Query: 171 RGLQKHGFVPELVTY--NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           RG    G  P+ +    +IL++   K    RTA   L E   SG + +  +Y   +  C 
Sbjct: 64  RGAASRGGKPKSLVKLKSILLE--AKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACS 121

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV--TDGVQLD 286
             R++   + +L  M  +G T D   Y + IAA  K GR KEA D + QMV  T+G+  D
Sbjct: 122 NGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPD 181

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +V+YN+ I      G+ + A  LL++M  QG   +  T+   I    K    + A   LE
Sbjct: 182 VVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLE 241

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            + + GF  +   YN ++D   K G+   A+++   M       D  +YSS++    + +
Sbjct: 242 EVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGR 301

Query: 403 RLPSASKLLLSCLKSGV 419
           R   A  LL      GV
Sbjct: 302 RWKEAMDLLEQMRTQGV 318


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 199/414 (48%), Gaps = 11/414 (2%)

Query: 12  ICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I +   CK   +E A    + +   GI++ V P    YN LI+ YC+  S D    +L+ 
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSG 456

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G++P   +Y+ LIAG  RN  LS  ++L  EM E GI  + +++ +L++   +  K
Sbjct: 457 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 516

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA R+F  MI  ++ P   TFN+M+ G C       A +++  + + G  P+  TY  
Sbjct: 517 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 576

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLC    +  A   + +L +S    N  + T ++   FR  ++     +   M  +G
Sbjct: 577 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 636

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   +  ++ A +K    +++     +M   GV+ D + Y  +I+   KE  +  A 
Sbjct: 637 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 696

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
              D+M   G+  +  THT+LI+ LCK+G +  A L  + M       N   YNC +D  
Sbjct: 697 NCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 756

Query: 368 GKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +G ++ A ++  +M    +    +++ ++  LCKA ++  A  L+    +SG
Sbjct: 757 ATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 810



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 195/418 (46%), Gaps = 4/418 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG++P+V  YN LID  C+   FD    +   M   G+ P+ VTY  LI    +  ++  
Sbjct: 355 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 414

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M + GI   V+ YNSL++   + G  D A  +   M+   LTP  A+++ ++ 
Sbjct: 415 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 474

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+N    + + + R + + G      T+  LI G CK  ++  A  +  ++ DS   P
Sbjct: 475 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T+  +++        +   ++   M   G   D + Y ++I+       + +A +++
Sbjct: 535 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 594

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             +      L+  S   L+  + +EG+    Y L DEM  +G + D  + TI++    K 
Sbjct: 595 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 654

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
            + + + +    M + G   +   Y C++D L K+  +  A+N ++ M V     ++ T+
Sbjct: 655 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTH 714

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +++NLCK+  L SA  L    L   V   K      +D     G   +AK + S +
Sbjct: 715 TVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 168/338 (49%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N+ +   CK  R+++A  +    + +GV  D VTY  L+  +C+    +    
Sbjct: 253 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 312

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I + M   G  P     + +I    +  L+  +  L  ++ ++G+ P+V++YN+L+  L 
Sbjct: 313 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 372

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+A+R+F++M    L P   T+ I+++ LCK    ++AL +F  ++  G    + 
Sbjct: 373 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN LI G CK G L  AR +L  +   G  P A +Y+ ++    RN      +E+   M
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G  ++ + +  +I  F K  ++ EA    ++M+   V  + V++N +I  YC  G +
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 552

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
             A+ L D+M + G + D YT+  LI GLC    +  A
Sbjct: 553 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 590



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 18/389 (4%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ GV  D   Y   I AYC+  + D    ++ RM   G+    V YN L+ G  +N  +
Sbjct: 213 LQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRV 272

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++++ + M+ +G+  D  +Y +L++   ++ + + A R+  DMI     P  A  + M
Sbjct: 273 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 332

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ L K    + A  +   L   G VP +  YN LI  LCK  R   A  + KE+   G 
Sbjct: 333 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 392

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY  ++    +    +  L +   M+ KG     + Y ++I  + K G L  A  
Sbjct: 393 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 452

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  MV +G+     SY+ LI   C+ G L +   L  EM ++G   + YT T LI+G C
Sbjct: 453 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 512

Query: 334 KAGNIKGARLHLEYM-------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 385
           K   +  A    + M       N++ F+  +E Y C+V      G I  A  +++ M   
Sbjct: 513 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEM 565

Query: 386 ---KDSFTYSSMVHNLCKAKRLPSASKLL 411
               D++TY S++  LC    +  A++ +
Sbjct: 566 GLKPDNYTYRSLISGLCLTSGVSKANEFV 594



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 41/403 (10%)

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +GI+ +  T + ++    +    + + DL D+ML+ G+  D + Y + +    +    D 
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M    +      +N+++ GLCKN     A+ +   +   G   + VTY  L+ 
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299

Query: 191 GLCKAGRLRTARWILKE-----------------------------------LGDSGHAP 215
           G C+   L  A  I  +                                   LGD G  P
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   Y  ++    +N ++     +   M  +G   +   Y  +I A  K G +++A    
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           ++M   G+++ +  YN+LIN YCK+G L+ A  LL  M K+G      +++ LI GLC+ 
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRN 479

Query: 336 GNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
           G++     LH E M + G   N   +  +++   KD K+D A  +F+ M     + +  T
Sbjct: 480 GDLSSCMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           ++ M+   C    +  A +L    ++ G++      ++++ GL
Sbjct: 539 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 69/385 (17%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  ++++A  +    I   V+P+ VT+N++I+ YC   +    + + ++M E G+ PD
Sbjct: 511 FCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 570

Query: 77  VVTYNSLIAGAT-----------------------------------RNSLLSCSLDLLD 101
             TY SLI+G                                     R    + +  L D
Sbjct: 571 NYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWD 630

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM   G+  D+ S+  +++   +    +++  +F++M    + P    +  M++ L K  
Sbjct: 631 EMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEE 690

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------- 208
               AL  +  +   G+ P  VT+ +LI  LCK+G L +A  + KE+             
Sbjct: 691 NMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 750

Query: 209 ---------GD------------SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
                    GD             GH  + +++  ++K   +  K +  ++++S +   G
Sbjct: 751 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 810

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           ++ D   Y T+I    K+G + +A +   +M+  G++ D+V+YN  I      G+ + A 
Sbjct: 811 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 870

Query: 308 LLLDEMEKQGFECDKYTHTILIDGL 332
            +   M + G + +  T+  L+ G+
Sbjct: 871 GIYTNMIRSGVQPNWDTYRALLSGI 895



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 1/244 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL      I V    K +  EK+  +  +    GV PD + Y  +IDA  +  +      
Sbjct: 638 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 697

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             ++M   G SP+ VT+  LI    ++  L  +  L  EML   + P+ ++YN  +    
Sbjct: 698 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 757

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  ++A  +   M+ G L     +FNI++ GLCK      A+ +   + + GF P+ +
Sbjct: 758 TEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 816

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +Y+ +I  LCK G +  A  +  E+   G  P+ + Y   ++ C  + +    L I + M
Sbjct: 817 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 876

Query: 244 KRKG 247
            R G
Sbjct: 877 IRSG 880



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 91/181 (50%), Gaps = 1/181 (0%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +   CK+  L  AE +  + +   VLP+  TYN  +D +      +    + + M + 
Sbjct: 716 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 775

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            ++  +V++N LI G  +   +  ++DL+ ++ E G  PD  SY++++H L ++G  ++A
Sbjct: 776 HLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 834

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ +M+   L P    +NI +     +  +D AL ++  + + G  P   TY  L+ G
Sbjct: 835 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894

Query: 192 L 192
           +
Sbjct: 895 I 895



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG   N  T + I+    + R++ L  ++   M + G   D + Y   I A+ +   L  
Sbjct: 180 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 239

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + +M ++GV+   V YN L+   CK  +++ A  + + M   G   D+ T+  L+ 
Sbjct: 240 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 299

Query: 331 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 355
           G C+   ++ A      M ++GF                                     
Sbjct: 300 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 359

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+ AYN ++D+L K+ + D A  +F+ M  +    +  TY+ ++H LCK   +  A  L 
Sbjct: 360 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 419

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
                 G+++      ++++G    G    A+ + S
Sbjct: 420 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 455



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CKA ++++A  ++      G  PD ++Y+ +I   C+    +  + + N M 
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
             G+ PDVV YN  I     +     +L +   M+  G+ P+  +Y +L+
Sbjct: 843 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 35/397 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  + N  +   CK    E+A  ++ + +  G+ P+V++Y  +I+A     + +    +L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL--- 122
            +M   G SP++ T+ SLI G         +LD  D M+  G+ P+V +YN+LMH L   
Sbjct: 305 AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364

Query: 123 --------------------------------FQLGKPDEANRVFQDMICGDLTPCTATF 150
                                            + G  D A+ V+  MI     P    +
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
             M++ LC+N   + A  +   +Q     P  VT+N  IKGLC +GR+  A  +  ++G+
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG  PN  TY  ++    ++R++     ++  M+ +G   +   Y T+I  +   G L E
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A + + +MV  G + D ++ N +I+ YCK+GK+  A  L+D +    +  D   +T LI 
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
           G+C    ++ A ++L  M   G   N+  +N +V  L
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 189/410 (46%), Gaps = 9/410 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           + + CK  ++++A  +      +   P V  YN LI+  C+  +F+  + +L+ M   GI
Sbjct: 223 ISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGI 277

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+V++Y ++I   +    +  SL +L +M   G  P++ ++ SL+   F  G   EA  
Sbjct: 278 DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALD 337

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            +  MI   + P    +N +++GLC  R   +A+ +F  ++ +G  P + TY+ LI G  
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYA 397

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG L  A  +   +   G  PN + YT ++    RN  +     ++  M+ +    +  
Sbjct: 398 KAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + T I      GR+  A    +QM   G   +  +YN L++   K+ +   A+ L+ +M
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDM 517

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           E +G E +  T+  +I G C AG +  A   L  M   G   +    N ++D   K GK+
Sbjct: 518 EHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577

Query: 374 DHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + AI + + +       D   Y+S++  +C    +  A   L   L  G+
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 195/425 (45%), Gaps = 34/425 (8%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           +TY M+I+        D    +L +M+  GIS     + S+I    R      +L     
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M +  + P V  YN ++  L    +    N ++ +M    + P   T+NI+L  LCKN  
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-------------------- 202
            D A ++   +   G  P+ V+Y  LI  LCK G+++ AR                    
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 203 ----------WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
                      +L E+ + G  PN I+YTTI+         +L L +L+ M  +G + + 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             + ++I  F   G   EA D+ ++M+ +GV  ++V+YN L++  C +  L  A  + ++
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           ME  G   +  T++ LIDG  KAG++ GA     +M   G   N+ AY C+VD L ++  
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
            + A  + E+M+V+    ++ T+++ +  LC + R+  A K+      SG     +    
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496

Query: 429 VVDGL 433
           ++D L
Sbjct: 497 LLDSL 501



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/484 (23%), Positives = 195/484 (40%), Gaps = 69/484 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K + ++ N  +      NR +    I  +  + G+ P+V TYN+L+ A C+    D  + 
Sbjct: 143 KPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHK 202

Query: 64  ILNRMREAGISPDVVT------------------------------YNSLIAGATRNSLL 93
           +L  M   G  PD V+                              YN+LI G  +    
Sbjct: 203 LLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTF 262

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +  LLDEM+  GI P+V SY ++++ L   G  + +  V   M     +P   TF  +
Sbjct: 263 EEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSL 322

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G      +  AL  +  + + G VP +V YN L+ GLC    L  A  +  ++  +G 
Sbjct: 323 IKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGC 382

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN  TY+ ++                          DG+          K G L  A++
Sbjct: 383 CPNVRTYSALI--------------------------DGYA---------KAGDLDGASE 407

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M+T G   ++V+Y  ++++ C+      AY L++ M+ +    +  T    I GLC
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
            +G +  A    + M   G   N   YN ++D L KD +   A  + + ME +    +  
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           TY+++++  C A  L  A +LL   +  G +        V+D     G    A ++  ++
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587

Query: 450 RMAK 453
              K
Sbjct: 588 SAGK 591



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 140/284 (49%), Gaps = 2/284 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+V TY+ LID Y +    D    + N M   G  P+VV Y  ++    RNS+ + +
Sbjct: 381 GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQA 440

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L++ M     PP+  ++N+ +  L   G+ D A +VF  M      P T T+N +L+ 
Sbjct: 441 YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDS 500

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L K+R    A  + + ++  G    LVTYN +I G C AG L  A  +L ++   G  P+
Sbjct: 501 LLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPD 560

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           AIT   ++    +  K  + ++++  +    +  D   Y ++I+       ++EA  Y+ 
Sbjct: 561 AITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLR 620

Query: 277 QMVTDGVQLDIVSYNTLI-NLYCKEGKLEAAYLLLDEMEKQGFE 319
           +M+++G+  ++ ++N L+ +L+   G    A   LD +   GFE
Sbjct: 621 RMLSEGISPNVATWNVLVRHLFSNMGH-SGAVQFLDAVLGSGFE 663



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 60/114 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C A  L +A  ++   +  G  PD +T N++IDAYC+    +    +++R+  
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               PD++ Y SLI+G   +  +  ++  L  ML  GI P+V ++N L+  LF 
Sbjct: 590 GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS 643


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 202/406 (49%), Gaps = 5/406 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + T C+  ++  A +++ D +  G  PDVVTYN+L++A C+   +     +++ MR 
Sbjct: 171 NPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRA 230

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+ VTYN L+ G      +  +L+LL  +   G  P   +YN+++  L    +  +
Sbjct: 231 EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGD 290

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +  +M+  +  P  ATFN+++  LC+      A+++   + KHG    +VTYN +I 
Sbjct: 291 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 350

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC+   +  A  +L ++   G  P+ +TY T++K      ++    E++  M + G   
Sbjct: 351 GLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLP 410

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   + T+I    + G + +A +  +QM   G   + ++Y+T+I+   K  KL+ A  L 
Sbjct: 411 DNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 470

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM  +GF  DK  + +L + L     I+ A   +  +   G   +   YN I+  L ++
Sbjct: 471 NEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 529

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
           GK + AI++   M     + D  TY  ++  L     L  A +LL+
Sbjct: 530 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 575



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 201/437 (45%), Gaps = 8/437 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+A RL  A  ++     + V P+  TYN LI   C+        ++L+ M   G +PD
Sbjct: 145 YCRAGRLGDARRVVGG---MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPD 201

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYN L+    +      +++L+D M   G  P+  +YN LM  +   G  D+A  + +
Sbjct: 202 VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLR 261

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           ++      P T  +N +L GLC      +A  +   + +    P   T+N++I  LC+ G
Sbjct: 262 NLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 321

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L+ A  +L+++   G   N +TY  I+      R     + +LS MK  G   D   Y 
Sbjct: 322 LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYN 381

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++       +  +A + M+ M  +G   D V++NTLI   C++G +  A  +  +M  +
Sbjct: 382 TLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 441

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +  T++ +I GL KA  +  A      M   GF+ + + Y  + + L  D  I+ A
Sbjct: 442 GCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEA 500

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           I     ++       +  Y++++  LC+  +   A  ++   + SG          +++G
Sbjct: 501 IQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEG 560

Query: 433 LRHSGCRREAKKIQSKI 449
           L + G   EA+++  K+
Sbjct: 561 LAYEGYLNEARELLIKL 577



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 167/375 (44%), Gaps = 6/375 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  V   C+  R + AE ++      G    VV Y  L D YC+         ++  M
Sbjct: 105 LANRLVRDLCRRGRPDDAERVVG---ACGPAATVVAYGALTDGYCRAGRLGDARRVVGGM 161

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               + P+  TYN LI        +  +L +LD+ML  G  PDV +YN L+    +    
Sbjct: 162 P---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGY 218

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +   M     TP   T+N++++G+C     D+AL + R L  HG  P  V YN +
Sbjct: 219 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 278

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +KGLC A R   A  ++ E+      PN  T+  ++    R    +  +++L  M + G 
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           T +   Y  +I    +   +  A   + +M + G + DIV+YNTL+   C   +   A  
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L+D M + G   D  T   LI  LC+ G +  A    + M   G   N   Y+ I+  L 
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458

Query: 369 KDGKIDHAINVFESM 383
           K  K+D A+ +F  M
Sbjct: 459 KATKLDQALELFNEM 473



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 157/314 (50%), Gaps = 10/314 (3%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PPD    N L+  L + G+PD+A RV     CG      A +  + +G C+     +A R
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDAERVVG--ACGPAATVVA-YGALTDGYCRAGRLGDARR 156

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +  G+      P   TYN LI  LC+ G++R A  +L ++   G AP+ +TY  +++   
Sbjct: 157 VVGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATC 213

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           + R Y+  +E++  M+ +G T +   Y  ++      G + +A + +  + + G +   V
Sbjct: 214 KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 273

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YNT++   C   +   A  L+ EM ++    ++ T  ++I  LC+ G ++ A   LE M
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 333

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 404
           +K G  +N+  YN I++ L +   +D A+ +   M+      D  TY++++  LC A + 
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393

Query: 405 PSASKLLLSCLKSG 418
             A +L+ +  ++G
Sbjct: 394 VDAEELMDNMTQNG 407



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 1/307 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ST   N  +   C A R   A+ ++ + +R    P+  T+N++I + C+         
Sbjct: 269 KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQ 328

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M + G + ++VTYN++I G      +  ++ LL +M   G  PD+ +YN+L+  L 
Sbjct: 329 LLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLC 388

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
              +  +A  +  +M      P   TFN ++  LC+     +A+ +F+ +   G  P  +
Sbjct: 389 SAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSI 448

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY+ +I GL KA +L  A  +  E+G  G  P+ I Y  + +C   +   +  ++ +  +
Sbjct: 449 TYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKL 507

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +  G +     Y  ++    + G+ + A D M  MV+ G   D ++Y  LI     EG L
Sbjct: 508 QDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYL 567

Query: 304 EAAYLLL 310
             A  LL
Sbjct: 568 NEARELL 574


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 221/446 (49%), Gaps = 11/446 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C  N ++ A +++ D  + G +P+ V Y  LI A  +    +    +L  M   G  P
Sbjct: 217 ALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLP 276

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV T+N +I G  R + +     L+D ML  G  P+  +Y  LM+ L ++GK DEA  + 
Sbjct: 277 DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL 336

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNA-LRMFRGLQKHGFVPELVTYNILIKGLCK 194
             +     TP    F I++NG  K+   D A   ++  + K+G  P++ T+N LI GLCK
Sbjct: 337 NKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCK 392

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            G + +A  ++ ++  +G  PN ITYTT++   C +N+  + G  +L+ M  KG+  +  
Sbjct: 393 KGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGY-VLNEMSAKGFELNIM 451

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
           GY  ++ A  K G++ +A D + +M   G + DI ++NTLI   CK  + E A  L  +M
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G   +  T+  LI    + G I+ A   +  M   G   +   YN ++    K G  
Sbjct: 512 LLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGAT 571

Query: 374 DHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + A+ +F+ M  KD    + + + +++ LC+  ++ +A +LL   +  G+        ++
Sbjct: 572 EKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSL 631

Query: 430 VDGLRHSGCRREAKKIQSKIRMAKIS 455
           ++GL   G  REA  + +K++   I 
Sbjct: 632 INGLCKMGNIREAFNLFNKLQAEGIQ 657



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 192/427 (44%), Gaps = 36/427 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN--- 66
            N  +   C+ NR+ +   ++   +  G  P+ +TY +L++  C+    D    +LN   
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP 340

Query: 67  ------------------RMREA-----------GISPDVVTYNSLIAGATRNSLLSCSL 97
                             R+ EA           G  PDV T+N+LI G  +  L+  ++
Sbjct: 341 TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAV 400

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           D++++M   G  P++ +Y +L+    +  + +EA  V  +M           +N++L  L
Sbjct: 401 DMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRAL 460

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CKN     AL M   +   G  P++ T+N LI GLCK  R   A  + +++   G   N 
Sbjct: 461 CKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANT 520

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TY T++    R    +  L++++ M  +G   D   Y  +I AF K+G  ++A    ++
Sbjct: 521 VTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDE 580

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV   +    +S N LIN  C+ GK+  A  LL +M  +G   D  T+  LI+GLCK GN
Sbjct: 581 MVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGN 640

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSS 393
           I+ A      +   G   +   YN ++    + G  D A    +   E+  + +  T+  
Sbjct: 641 IREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYI 700

Query: 394 MVHNLCK 400
           +V N  K
Sbjct: 701 LVSNFIK 707



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 185/377 (49%), Gaps = 9/377 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P   +YN ++      +  S + ++  EML  G+ P V+++  +M  L  + + D A  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + +DM      P +  +  +++ L K    + AL++   +   G +P++ T+N +I GLC
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +  R+     ++  +   G  PN ITY  +M    R  K      +L+ +     T +  
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDV 345

Query: 254 GYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
            +  +I  +VK GRL EA  ++ ++M+ +G + D+ ++NTLI+  CK+G + +A  ++++
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M   G   +  T+T L+DG CK   ++ A   L  M+  GF+ N+  YN ++  L K+GK
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +  A+++   M  K    D FT+++++  LCK  R   A  L    L  GV         
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525

Query: 429 VVDGLRHSGCRREAKKI 445
           ++      G  +EA K+
Sbjct: 526 LIHAFLRGGAIQEALKL 542



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 2/190 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +  F +   +++A  ++ D +  G   D +TYN LI A+C+  + +    + 
Sbjct: 519 NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF 578

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M    + P  ++ N LI G  R   +  +L+LL +M+  G+ PDV +YNSL++ L ++
Sbjct: 579 DEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA-LRMFRGLQKHGFVPELVT 184
           G   EA  +F  +    + P   T+N ++   C+    D+A L + RG++ + F+P  VT
Sbjct: 639 GNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVE-NAFIPNDVT 697

Query: 185 YNILIKGLCK 194
           + IL+    K
Sbjct: 698 WYILVSNFIK 707



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 4/154 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCK    EKA  +  + +R  ++P  ++ N+LI+  C+         +L  M   G++P
Sbjct: 564 AFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAP 623

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           DVVTYNSLI G  +   +  + +L +++   GI PD  +YN+L+  HC  + G  D+A  
Sbjct: 624 DVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC--RAGMFDDAYL 681

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           +    +     P   T+ I+++   K    +N +
Sbjct: 682 LLLRGVENAFIPNDVTWYILVSNFIKEIGKENGI 715



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 9/233 (3%)

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV---QLDI 287
           +++K+  ++L  +K +G  F    +  ++  + +     +AT  +  M   GV   +   
Sbjct: 116 KEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM--KGVYCCEPTF 173

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
            SYN ++++         A  +  EM  +G     YT  +++  LC    +  A   L  
Sbjct: 174 KSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD 233

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 403
           M K G   N   Y  ++  L K  +++ A+ + E M +     D  T++ +++ LC+  R
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           +   +KL+   L  G          +++GL   G   EA+ + +K+      H
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH 346


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 186/410 (45%), Gaps = 39/410 (9%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY  LI+AYC      A    L  +  AG++PD   Y S + G  R  +L+ +  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G     ++Y +L+H L   G   EA  VF  M      P T  +  M++GLC+   T
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A  +      +GF P +V YN LI G C AG +  A  + + +  +  +PN  TYT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +                             G C       K G+++ A     +MV  G+
Sbjct: 254 IH----------------------------GLC-------KSGKVERAMVLFSRMVEAGL 278

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V+Y  LI   C EG L+ A+ LL  ME  G   + +T ++LID LCK   ++ A+L
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
            L  + K G   N   Y  ++D L K GKID A  + + M     V D+ +YSS++  LC
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + K+L  A+ +L   ++ G++        ++D L         KKI  K+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 198/416 (47%), Gaps = 4/416 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R     +  +C A  +  A+  +   +  G+ PD   Y   +  YC+         +   
Sbjct: 73  RTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVL 132

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G      TY +L+ G     ++  ++ +   M      PD   Y +++H L + G+
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  + ++ +     P    +N +++G C     ++AL++F G+  +   P + TY  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK+G++  A  +   + ++G  PN +TYT +++        +    +L  M+  G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              + + +  +I A  K  +++EA  ++  +V  GV+++ V Y +LI+  CK GK++AA 
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+ +M  +GF  D ++++ LIDGLC+   +  A L LE M + G  ++   Y  I+D L
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432

Query: 368 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            ++   +    +F+ M       D  TY+  V + C+  R+  A  +++  +  GV
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 196/431 (45%), Gaps = 16/431 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A R E+AE ++ + +  G  P++V YN LID YC     +    +   M     SP+
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI G  ++  +  ++ L   M+E G+ P+V +Y +L+      G    A R+  
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   TF+++++ LCK    + A      L K G     V Y  LI GLCK G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  +++++   G  P+A +Y++++    R +K      +L  M  KG       Y 
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   V+    +      ++M+  G+  DIV+Y   +  YC+EG++E A  ++ +M  +
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +  T+  LI G    G +  A    E M   G+  N ++Y  ++  + K    D++
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546

Query: 377 INVFESMEVKD----------------SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +++++  ++KD                +  YS  +  LC+  RL  A    +    + + 
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606

Query: 421 ILKSAQKAVVD 431
             +    +++D
Sbjct: 607 PSEDVYTSIID 617



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 160/357 (44%), Gaps = 6/357 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD   Y  ++   C+    +    +L      G  P++V YN+LI G      +  +L +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            + M      P+V +Y  L+H L + GK + A  +F  M+   L P   T+  ++ G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             +   A R+   ++ +G VP   T+++LI  LCK  ++  A+  L  L   G   N + 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT+++    +  K     E++  M  +G+  D   Y ++I    +  +L +AT  +E M+
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+Q   V+Y  +I+   +E   E    + D+M   G   D  T+T+ +   C+ G ++
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK------DSFT 390
            A   +  M   G   NL  YN ++      G +  A + FE M  K      DS+T
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 23/321 (7%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +   CK  ++E+A+  +   ++ GV  + V Y  LID  C+    DA   ++ +M 
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD  +Y+SLI G  R   LS +  +L++M+E GI     +Y  ++  L +    +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
              ++F  MI   + P   T+ + +   C+    ++A  M   +   G  P LVTYN LI
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           +G    G +  A    + +   G  PN  +YT +++   +       ++I          
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW--------- 550

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                         KI  +K+    +E +    + L    Y+  I   C+  +LE A   
Sbjct: 551 --------------KIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHF 596

Query: 310 LDEMEKQGFECDKYTHTILID 330
              M+       +  +T +ID
Sbjct: 597 FMGMQNANLTPSEDVYTSIID 617



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 108/223 (48%), Gaps = 12/223 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+  +L +A  ++ D +  G+    VTY ++ID   + V  +    I ++M   GI+PD
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY   +        +  +  ++ +M++ G+ P++ +YN+L+     LG   +A   F+
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR--GLQKHGFVPELVT---------- 184
            M+     P   ++ ++L  + K   +DN++ +++   ++    + E +T          
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADI 576

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
           Y+  I+ LC+  RL  A+     + ++   P+   YT+I+ CC
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCC 619



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%)

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME + +     ++ +Y TLIN YC  G + AA   L  +   G   D Y +T  + G C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AG +  A      M   G       Y  ++  L   G +  A+ VF  M       D+  
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHV 179

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y++MVH LC+A R   A  LL   + +G         A++DG  ++G    A K+
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 173/337 (51%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T  LN  +   C   ++ +A       + LG   D V+Y  LI   C+     A   +L
Sbjct: 6   NTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL 65

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            R+    +  + V YN++I G  ++  ++ + DL  EM+  GI P+V +Y++L+   F +
Sbjct: 66  QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 125

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  +A  +F  +I  ++ P   TFNI+++G CK+R       +F  + K G +P++VTY
Sbjct: 126 GKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 185

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N L+ G      + TA+ I   +   G  P+  +Y  ++    + +K    + + + M  
Sbjct: 186 NSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC 245

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           K    +   Y ++I    K GR+  A   ++QM   GV  +I++YN++I+   K  +++ 
Sbjct: 246 KNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDK 305

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           A  L+ + + QG +   YT+TILIDGLCK G +K AR
Sbjct: 306 AIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDAR 342



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 173/345 (50%), Gaps = 6/345 (1%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P+ +T N+LI G      +  +    D+++ +G   D  SY +L+H L ++G+   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 132 NRVFQDMICGDLTPCTAT-FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
             + Q  + G L    A  +N ++ G+CK+++ ++A  ++  +   G  P +VTY+ LI 
Sbjct: 62  LDLLQ-RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G    G+L+ A  +  ++      P+  T+  ++    ++RK K G  + + M ++G   
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y +++  +  +  +  A      M   GV  DI SYN LIN +CK  K++ A  L 
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +EM  +    +  T+  LIDGL K+G I  A   ++ M+  G   N+  YN I+D L K 
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300

Query: 371 GKIDHAINV---FESMEVKDS-FTYSSMVHNLCKAKRLPSASKLL 411
            ++D AI +   F+   ++ S +TY+ ++  LCK  RL  A  + 
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 138/275 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+  + N  +   CK   +  A  +  + +  G+ P+VVTY+ LI  +           
Sbjct: 74  QLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAID 133

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + N++    I PD  T+N L+ G  ++  +     +   M++ GI PDV +YNSL+    
Sbjct: 134 LFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYR 193

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            + + + A  +F  M  G + P   ++NI++NG CK +  D A+ +F  +     +P +V
Sbjct: 194 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVV 253

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN LI GL K+GR+  A  ++ ++ D G  PN +TY +I+   F+  +    + +++  
Sbjct: 254 TYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKF 313

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           K +G     + Y  +I    K GRLK+A +  E +
Sbjct: 314 KDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 163/348 (46%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +G  P+ +T N LI   C        +   +++   G   D V+Y +LI G  +      
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +LDLL  +    +  +   YN++++ + +    ++A  ++ +M+   ++P   T++ +++
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G        +A+ +F  +      P+  T+NIL+ G CK  +++  + +   +   G  P
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +TY +++      ++      I + M + G   D   Y  +I  F KI ++ +A +  
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M    +  ++V+YN+LI+   K G++  A  L+D+M  +G   +  T+  +ID L K 
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
             +  A   +      G   ++  Y  ++D L K G++  A N+FE +
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 4/293 (1%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P T T N ++ GLC       A      L   GF  + V+Y  LI GLCK G  R A  +
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
           L+ +       NA+ Y T++    +++      ++ S M  KG + +   Y  +I+ F  
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           +G+LK+A D   +++ + ++ D  ++N L++ +CK+ K++    +   M KQG   D  T
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           +  L+DG      +  A+     M + G + ++ +YN +++   K  K+D A+N+F  M 
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 385 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
               + +  TY+S++  L K+ R+  A +L+      GV        +++D L
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 297


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 204/419 (48%), Gaps = 5/419 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST+ LN  V    +   +E AE +  +    GV P+ V+Y +++  YC+  +       L
Sbjct: 166 STKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWL 225

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M E G   D  T + ++        ++ +L       EMG+ P++ ++  ++  L + 
Sbjct: 226 GGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKR 285

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F  L +     P ++T
Sbjct: 286 GSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 345

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I G C+  ++  A  +L  + + G APN  TYTT++    +   ++   E+++ M 
Sbjct: 346 YTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMN 405

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G++ +   Y  ++    K GR++EA   ++    +G+  D V+Y  LI+ +CK+ +++
Sbjct: 406 EEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIK 465

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A +L ++M K G + D +++T LI   C+   +K + +  E   + G     + Y  ++
Sbjct: 466 QALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMI 525

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               ++G +  A+  F  M       DS TY +++  LCK  +L  A  L  + ++ G+
Sbjct: 526 CGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGL 584



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 187/418 (44%), Gaps = 53/418 (12%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TRL   C  +       EKA  ++                 ++ ++ +         ++ 
Sbjct: 112 TRLYIACAASLISNKNFEKAHEVM---------------QCMVKSFAEIGRVKEAIEMVI 156

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G++P   T N ++   T   L+  + +L DEM   G+ P+  SY  ++    +LG
Sbjct: 157 EMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLG 216

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              E++R    MI        AT ++++   C+  +   AL  FR   + G  P L+ + 
Sbjct: 217 NVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFT 276

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I+GLCK G ++ A  +L+E+   G  PN  T+T                 ++  + +K
Sbjct: 277 CMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA----------------LIDGLCKK 320

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+T   F        F+K+ R            ++  + ++++Y  +I+ YC++ K+  A
Sbjct: 321 GWTEKAF------RLFLKLVR------------SENHKPNVLTYTAMISGYCRDEKMNRA 362

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
            +LL  M++QG   +  T+T LIDG CKAGN + A   +  MN+ GF  N+  YN IVD 
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422

Query: 367 LGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           L K G++  A  V    F +    D  TY+ ++   CK   +  A  L    +KSG++
Sbjct: 423 LCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQ 480



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 8/374 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI-LNRMREAGISP 75
            CK   +++A  ++ + +  G  P+V T+  LID  C+    +  + + L  +R     P
Sbjct: 282 LCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKP 341

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           +V+TY ++I+G  R+  ++ +  LL  M E G+ P+  +Y +L+  HC  + G  + A  
Sbjct: 342 NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHC--KAGNFERAYE 399

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M     +P   T+N +++GLCK      A ++ +   ++G   + VTY ILI   C
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K   ++ A  +  ++  SG  P+  +YTT++    R ++ K          R G      
Sbjct: 460 KQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNK 519

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y ++I  + + G L+ A  +  +M   G   D ++Y  LI+  CK+ KL+ A  L D M
Sbjct: 520 TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAM 579

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            ++G    + T   L    CK  +   A + LE + K  +   +   N +V +L  + K+
Sbjct: 580 IEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLW---VRTVNTLVRKLCSERKV 636

Query: 374 DHAINVFESMEVKD 387
             A   F  +  KD
Sbjct: 637 GMAALFFHKLLDKD 650



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 46/340 (13%)

Query: 116 NSLMHCLF----QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           + +M C+     ++G+  EA  +  +M    L P T T N ++  + +    + A  +F 
Sbjct: 132 HEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFD 191

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGR-LRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
            +   G  P  V+Y +++ G CK G  L + RW                           
Sbjct: 192 EMCARGVQPNCVSYRVMVVGYCKLGNVLESDRW--------------------------- 224

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                    L  M  +G+  D      ++  F + G +  A  Y  +    G++ +++++
Sbjct: 225 ---------LGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINF 275

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMN 349
             +I   CK G ++ A+ +L+EM  +G++ + YTHT LIDGLCK G  + A RL L+ + 
Sbjct: 276 TCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR 335

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
                 N+  Y  ++    +D K++ A  +   M+      ++ TY++++   CKA    
Sbjct: 336 SENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFE 395

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            A +L+    + G         A+VDGL   G  +EA K+
Sbjct: 396 RAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV 435



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 45/264 (17%)

Query: 14  VCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           VCT+       CK  R+++A  ++  G R G+  D VTY +LI  +C+         + N
Sbjct: 413 VCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFN 472

Query: 67  RMREAGISPDVVTYNSLIA-----------------------------------GATRNS 91
           +M ++GI PD+ +Y +LIA                                   G  R  
Sbjct: 473 KMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREG 532

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L  +L     M + G   D  +Y +L+  L +  K DEA  ++  MI   LTPC  T  
Sbjct: 533 NLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRV 592

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +    CK     +A+ +   L+K  +V    T N L++ LC   ++  A     +L D 
Sbjct: 593 TLAYEYCKIDDGCSAMVVLERLEKKLWVR---TVNTLVRKLCSERKVGMAALFFHKLLDK 649

Query: 212 GHAPNAITYTTIMKCCFRNRKYKL 235
               N +T    M  C+ + KY L
Sbjct: 650 DPNVNRVTIAAFMTACYESNKYDL 673



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++ +F +IGR+KEA + + +M   G+     + N ++ +  + G +E A  L DEM  +G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + +  ++ +++ G CK GN+  +   L  M + GF  +    + IV    + G +  A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 378 NVFE---SMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             F     M ++ +   ++ M+  LCK   +  A ++L   +  G +       A++DGL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 434 RHSGCRREAKKIQSKI 449
              G   +A ++  K+
Sbjct: 318 CKKGWTEKAFRLFLKL 333


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 196/440 (44%), Gaps = 36/440 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC  N ++ A +++ D  + G +P+ + Y MLI A  +    +    +L  M   G  PD
Sbjct: 210 FCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPD 269

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA----- 131
           V T+N +I G  +   +  +  L D ML      D      LMH L ++GK DEA     
Sbjct: 270 VQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLS 329

Query: 132 ---------------------------NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
                                      + ++++M+     P   TFNIM++GLCK  Y  
Sbjct: 330 KIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLV 389

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           +AL     + K GF P ++TY ILI G CK G    A  ++  +   G + N + Y  ++
Sbjct: 390 SALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLI 449

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               ++ K +  L++   M  KG   D + + ++I    K  +++EA      M+ +GV 
Sbjct: 450 GALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVI 509

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            + V+YNTLI+ + +   ++ A  L+ EM  +G   D  T+  LI  LCK G  +     
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
           +E M       ++ + N +++   + GK++ A+     M       D  TY+S+++ LCK
Sbjct: 570 IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629

Query: 401 AKRLPSASKLLLSCLKSGVR 420
             R   A  L       G+ 
Sbjct: 630 MGRFQEALNLFNGLQAKGIH 649



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 187/396 (47%), Gaps = 9/396 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +      N  + A  +  D +  G+ P V T+ +++ A+C     D+  ++L  M +
Sbjct: 169 NVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTK 228

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+ + Y  LI   + N+ ++ ++ LL+EM  MG  PDV ++N ++H L + G+  E
Sbjct: 229 HGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHE 288

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M+  D T        +++GLC+    D A  M   +      P  V YN LI 
Sbjct: 289 AAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLIN 344

Query: 191 GLCKAGRLRTARWIL-KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           G   +GR   A+ +L K +  +G  P+A T+  ++    +       LE L  M +KG+ 
Sbjct: 345 GYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE 404

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  +I  F K G  +EA+  +  M   G+ L+ V YN LI   CK+GK++ A  +
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
             EM  +G + D YT   LI GLCK   ++ A      M   G  +N   YN ++    +
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
              I  A  +   M  +    D+ TY+ ++  LCK 
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKT 560



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 190/388 (48%), Gaps = 9/388 (2%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR-MREAGISPD 76
           C+  ++++A A++         P+ V YN LI+ Y     F+    +L + M  AG  PD
Sbjct: 316 CRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             T+N +I G  +   L  +L+ LDEM++ G  P+V +Y  L+    + G  +EA++V  
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L+  T  +N ++  LCK+    +AL+M+  +   G  P++ T+N LI GLCK  
Sbjct: 432 SMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  + +++   G   N +TY T++    R    +   +++  M+ +G   D   Y 
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYN 551

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A  K G  ++    +EQM  + +   I S N LIN +C+ GK+  A   L +M ++
Sbjct: 552 GLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQR 611

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   D  T+  LI+GLCK G  + A      +   G   +   YN ++ R   +G  + A
Sbjct: 612 GLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671

Query: 377 IN-VFESME---VKDSFTYSSMVHNLCK 400
              +F+ +    + +  T+S +++   K
Sbjct: 672 CQLLFKGVSNGFIPNEITWSILINYFVK 699



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 188/388 (48%), Gaps = 17/388 (4%)

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
             P   +YN ++      +    + ++  +ML  GI P V+++  +M     + + D A 
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
            + +DM      P +  + ++++ L +N   + A+++   +   G  P++ T+N +I GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CKAGR+  A  +   +       +A+    +M    R  K      +LS +         
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVL-- 338

Query: 253 FGYCTVIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
             Y T+I  +V  GR +EA D + + MV  G + D  ++N +I+  CK+G L +A   LD
Sbjct: 339 --YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM K+GFE +  T+TILIDG CK G+ + A   +  M+  G   N   YNC++  L KDG
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456

Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           KI  A+ ++  M  K    D +T++S+++ LCK  ++  A  L    L  GV     A  
Sbjct: 457 KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGV----IANT 512

Query: 428 AVVDGLRHSGCR----REAKKIQSKIRM 451
              + L H+  R    ++A K+  ++R 
Sbjct: 513 VTYNTLIHAFLRLELIQQADKLVGEMRF 540



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 163/325 (50%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK   L  A   + + ++ G  P+V+TY +LID +C+   F+    ++N M 
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+S + V YN LI    ++  +  +L +  EM   G  PD++++NSL++ L +  K +
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +++DM+   +   T T+N +++   +      A ++   ++  G   + +TYN LI
Sbjct: 495 EALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
           K LCK G       +++++      P+  +   ++    R  K    L+ L  M ++G T
Sbjct: 555 KALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLT 614

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I    K+GR +EA +    +   G+  D V+YNTLI+ YC EG    A  L
Sbjct: 615 PDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674

Query: 310 LDEMEKQGFECDKYTHTILIDGLCK 334
           L +    GF  ++ T +ILI+   K
Sbjct: 675 LFKGVSNGFIPNEITWSILINYFVK 699



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 7/237 (2%)

Query: 1   MFGKLSTR-------LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           M+G++S++         N  +   CK +++E+A  +  D +  GV+ + VTYN LI A+ 
Sbjct: 464 MYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFL 523

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         ++  MR  G   D +TYN LI    +       L L+++M    I P + 
Sbjct: 524 RLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           S N L++   + GK ++A +  +DMI   LTP   T+N ++NGLCK      AL +F GL
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           Q  G  P+ VTYN LI   C  G    A  +L +   +G  PN IT++ ++    +N
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 174/421 (41%), Gaps = 43/421 (10%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G++ G +     Y +LID       F     +L +M++ G       +  ++    +  L
Sbjct: 85  GLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGL 144

Query: 93  LSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
              +  LL +M  +    P   SYN ++  L     P  A  VF DM+   ++P   TF 
Sbjct: 145 PGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFG 204

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           +++   C     D+A  + R + KHG VP  + Y +LI  L +  R+  A  +L+E+   
Sbjct: 205 VVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLM 264

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+  T+  ++    +  +     ++   M  + +T D      ++    ++G++ EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILID 330
                 M++     + V YNTLIN Y   G+ E A  LL   M   GFE D +T  I+ID
Sbjct: 325 ----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
           GLCK G +  A   L+ M K GF+ N+                                T
Sbjct: 381 GLCKKGYLVSALEFLDEMVKKGFEPNV-------------------------------IT 409

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y+ ++   CK      ASK++ S    G+ +       ++  L   G      KIQ  ++
Sbjct: 410 YTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG------KIQDALQ 463

Query: 451 M 451
           M
Sbjct: 464 M 464



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 2/261 (0%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T   N  +   CK  +++ A  +  +    G  PD+ T+N LI   C+    +    +
Sbjct: 440 LNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGL 499

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M   G+  + VTYN+LI    R  L+  +  L+ EM   G P D  +YN L+  L +
Sbjct: 500 YRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCK 559

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G  ++   + + M   ++ P   + NI++N  C+    ++AL+  R + + G  P++VT
Sbjct: 560 TGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAM 243
           YN LI GLCK GR + A  +   L   G  P+A+TY T++ + C+    +    ++L   
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL-FNDACQLLFKG 678

Query: 244 KRKGYTFDGFGYCTVIAAFVK 264
              G+  +   +  +I  FVK
Sbjct: 679 VSNGFIPNEITWSILINYFVK 699



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 49/338 (14%)

Query: 126 GKPDEANRVFQDM---ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
           G P +A R+  DM    C    P   ++N++L  L        A  +F  +   G  P +
Sbjct: 143 GLPGQATRLLLDMWGVYC--FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
            T+ +++K  C    + +A  +L+++   G  PN+I Y  +                   
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQML------------------- 241

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
                           I A  +  R+ EA   +E+M   G + D+ ++N +I+  CK G+
Sbjct: 242 ----------------IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGR 285

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A  L D M  + F  D      L+ GLC+ G +  AR  L  +     + N   YN 
Sbjct: 286 IHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNT 341

Query: 363 IVDRLGKDGKIDHAIN-VFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
           +++     G+ + A + ++++M +     D+FT++ M+  LCK   L SA + L   +K 
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           G          ++DG    G   EA K+ + +    +S
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLS 439



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK    EK   +I       + P + + N+LI+++C+    +     L  M + G++PD+
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDI 617

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VTYNSLI G  +      +L+L + +   GI PD  +YN+L+      G  ++A ++   
Sbjct: 618 VTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFK 677

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
            +     P   T++I++N   KN        +  G
Sbjct: 678 GVSNGFIPNEITWSILINYFVKNNSDSEQFTILMG 712


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 219/472 (46%), Gaps = 33/472 (6%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS----------- 57
           +L+  +  +   NR   A  I     RL + P+++T N LI+A  ++ S           
Sbjct: 137 ILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIF 196

Query: 58  -----------FDAGYTILNRMREAGISPDVVTYNSL--IAGATRNSLLSCSLDLLDEML 104
                            ++ +M++    PD  +YN++  +    R+     S+D L+E+L
Sbjct: 197 TNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELL 256

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E G+ P   +YN+++H   + G+ ++A +    M+     P   T NI+L GLC     D
Sbjct: 257 ESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLD 316

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           NAL++F      G   + VTYN +I GLCK GR   A  +L E+ +    P+  TY  I+
Sbjct: 317 NALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAIL 376

Query: 225 KCCFRNRKYKL--GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
            C   + + ++    +  + M  K +  D F    ++      G L  A       ++ G
Sbjct: 377 -CALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKG 435

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTHTILIDGLCKAGNIKGA 341
             +D V+YNT+I+  CKEG+ E A+ LL EM EK G   D+ T+  +I G C+ G ++ A
Sbjct: 436 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKA 495

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
                 M +  F  +L   N ++  L ++G +  A+ +F +   K    D+ TY++++  
Sbjct: 496 FQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISG 555

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           LCK  R   A  LL    +  +        A++  L  +G R EA++  SKI
Sbjct: 556 LCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG-RMEAEEFMSKI 606


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 199/414 (48%), Gaps = 11/414 (2%)

Query: 12  ICVCTFCKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           I +   CK   +E A    + +   GI++ V P    YN LI+ YC+  S D    +L+ 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRARGLLSG 433

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M + G++P   +Y+ LIAG  RN  LS  ++L  EM E GI  + +++ +L++   +  K
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            DEA R+F  MI  ++ P   TFN+M+ G C       A +++  + + G  P+  TY  
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRS 553

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLC    +  A   + +L +S    N  + T ++   FR  ++     +   M  +G
Sbjct: 554 LISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRG 613

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   +  ++ A +K    +++     +M   GV+ D + Y  +I+   KE  +  A 
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQAL 673

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
              D+M   G+  +  THT+LI+ LCK+G +  A L  + M       N   YNC +D  
Sbjct: 674 NCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733

Query: 368 GKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
             +G ++ A ++  +M    +    +++ ++  LCKA ++  A  L+    +SG
Sbjct: 734 ATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 195/418 (46%), Gaps = 4/418 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG++P+V  YN LID  C+   FD    +   M   G+ P+ VTY  LI    +  ++  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L L D+M + GI   V+ YNSL++   + G  D A  +   M+   LTP  A+++ ++ 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+N    + + + R + + G      T+  LI G CK  ++  A  +  ++ DS   P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +T+  +++        +   ++   M   G   D + Y ++I+       + +A +++
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             +      L+  S   L+  + +EG+    Y L DEM  +G + D  + TI++    K 
Sbjct: 572 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
            + + + +    M + G   +   Y C++D L K+  +  A+N ++ M V     ++ T+
Sbjct: 632 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTH 691

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +++NLCK+  L SA  L    L   V   K      +D     G   +AK + S +
Sbjct: 692 TVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S    N+ +   CK  R+++A  +    + +GV  D VTY  L+  +C+    +    
Sbjct: 230 KASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR 289

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I + M   G  P     + +I    +  L+  +  L  ++ ++G+ P+V++YN+L+  L 
Sbjct: 290 ITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  + D+A+R+F++M    L P   T+ I+++ LCK    ++AL +F  ++  G    + 
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN LI G CK G L  AR +L  +   G  P A +Y+ ++    RN      +E+   M
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             +G  ++ + +  +I  F K  ++ EA    ++M+   V  + V++N +I  YC  G +
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNI 529

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
             A+ L D+M + G + D YT+  LI GLC  +G  K      +  N     +N  +   
Sbjct: 530 RKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNF-SLTA 588

Query: 363 IVDRLGKDGKIDHAINVFESMEVK 386
           ++    ++G+     ++++ M V+
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVR 612



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 18/389 (4%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++ GV  D   Y   I AYC+  + D    ++ RM   G+    V YN L+ G  +N  +
Sbjct: 190 LQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRV 249

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++++ + M+ +G+  D  +Y +L++   ++ + + A R+  DMI     P  A  + M
Sbjct: 250 QEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFM 309

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++ L K    + A  +   L   G VP +  YN LI  LCK  R   A  + KE+   G 
Sbjct: 310 IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGL 369

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY  ++    +    +  L +   M+ KG     + Y ++I  + K G L  A  
Sbjct: 370 EPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARG 429

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +  MV +G+     SY+ LI   C+ G L +   L  EM ++G   + YT T LI+G C
Sbjct: 430 LLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 489

Query: 334 KAGNIKGARLHLEYM-------NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 385
           K   +  A    + M       N++ F+  +E Y C+V      G I  A  +++ M   
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-CLV------GNIRKAFQLYDQMVEM 542

Query: 386 ---KDSFTYSSMVHNLCKAKRLPSASKLL 411
               D++TY S++  LC    +  A++ +
Sbjct: 543 GLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 174/410 (42%), Gaps = 41/410 (10%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L     +GI+ +  T + ++    +    + + DL D+ML+ G+  D + Y + +    
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    D A  +   M    +      +N+++ GLCKN     A+ +   +   G   + V
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 184 TYNILIKGLCKAGRLRTARWILKE-----------------------------------L 208
           TY  L+ G C+   L  A  I  +                                   L
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
           GD G  PN   Y  ++    +N ++     +   M  +G   +   Y  +I A  K G +
Sbjct: 330 GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMI 389

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
           ++A    ++M   G+++ +  YN+LIN YCK+G L+ A  LL  M K+G      +++ L
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 329 IDGLCKAGNIKG-ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 383
           I GLC+ G++     LH E M + G   N   +  +++   KD K+D A  +F+ M    
Sbjct: 450 IAGLCRNGDLSSCMELHRE-MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
            + +  T++ M+   C    +  A +L    ++ G++      ++++ GL
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 69/385 (17%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  ++++A  +    I   V+P+ VT+N++I+ YC   +    + + ++M E G+ PD
Sbjct: 488 FCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPD 547

Query: 77  VVTYNSLIAGAT-----------------------------------RNSLLSCSLDLLD 101
             TY SLI+G                                     R    + +  L D
Sbjct: 548 NYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWD 607

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EM   G+  D+ S+  +++   +    +++  +F++M    + P    +  M++ L K  
Sbjct: 608 EMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEE 667

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL------------- 208
               AL  +  +   G+ P  VT+ +LI  LCK+G L +A  + KE+             
Sbjct: 668 NMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727

Query: 209 ---------GD------------SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
                    GD             GH  + +++  ++K   +  K +  ++++S +   G
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           ++ D   Y T+I    K+G + +A +   +M+  G++ D+V+YN  I      G+ + A 
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 308 LLLDEMEKQGFECDKYTHTILIDGL 332
            +   M + G + +  T+  L+ G+
Sbjct: 848 GIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 1/244 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL      I V    K +  EK+  +  +    GV PD + Y  +IDA  +  +      
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             ++M   G SP+ VT+  LI    ++  L  +  L  EML   + P+ ++YN  +    
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G  ++A  +   M+ G L     +FNI++ GLCK      A+ +   + + GF P+ +
Sbjct: 735 TEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCI 793

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           +Y+ +I  LCK G +  A  +  E+   G  P+ + Y   ++ C  + +    L I + M
Sbjct: 794 SYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNM 853

Query: 244 KRKG 247
            R G
Sbjct: 854 IRSG 857



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +   CK+  L  AE +  + +   VLP+  TYN  +D +      +    + + M + 
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            ++  +V++N LI G  +   +  ++DL+ ++ E G  PD  SY++++H L ++G  ++A
Sbjct: 753 HLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 811

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             ++ +M+   L P    +NI +     +  +D AL ++  + + G  P   TY  L+ G
Sbjct: 812 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871

Query: 192 L---------CKAGRLRTARWILKELGDSGH 213
           +         C  G  +  +  + EL DS H
Sbjct: 872 ISLMLHYDFSCFRGTKQYIQISVYELMDSTH 902



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 39/276 (14%)

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           SG   N  T + I+    + R++ L  ++   M + G   D + Y   I A+ +   L  
Sbjct: 157 SGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDG 216

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   + +M ++GV+   V YN L+   CK  +++ A  + + M   G   D+ T+  L+ 
Sbjct: 217 ARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVY 276

Query: 331 GLCKAGNIKGARLHLEYMNKIGF-----------------------------------DS 355
           G C+   ++ A      M ++GF                                     
Sbjct: 277 GFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVP 336

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           N+ AYN ++D+L K+ + D A  +F+ M  +    +  TY+ ++H LCK   +  A  L 
Sbjct: 337 NVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLF 396

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
                 G+++      ++++G    G    A+ + S
Sbjct: 397 DKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CKA ++++A  ++      G  PD ++Y+ +I   C+    +  + + N M 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
             G+ PDVV YN  I     +     +L +   M+  G+ P+  +Y +L+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 216/439 (49%), Gaps = 14/439 (3%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  N  +  F ++++  +AE          V P+V TYN+L+   C+   F+ G  +L
Sbjct: 112 TIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLL 171

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M  AG+SPD +TY +LI G  ++  L  +L++ DEM E G+ PDV  YN ++   F+ 
Sbjct: 172 TWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKR 231

Query: 126 GKPDEANRVFQDMICGDLT-PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           G   +A  +++ ++  +L  P   ++N+M++GLCK       L ++  ++K+    +L T
Sbjct: 232 GDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFT 291

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+ LI GL +AG L  AR + +E+   G  P+ +T   ++    +    +   E+   M 
Sbjct: 292 YSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMG 351

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKL 303
           +     +   Y   +    + G++ +A      M+ DG ++ D  +Y  +++  C  G +
Sbjct: 352 KCSLR-NVRSYNIFLKGLFENGKVDDA-----MMLWDGLLEADSATYGVVVHGLCWNGYV 405

Query: 304 EAAYLLLDEMEKQ--GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             A  +L+E E +  G + D++ ++ LI+ LCK G +  A   +E MNK G   N    N
Sbjct: 406 NRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCN 465

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++D   K  K+D A+ VF  M  K       +Y+ +++ L +A+R   A   +   L+ 
Sbjct: 466 VLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEK 525

Query: 418 GVRILKSAQKAVVDGLRHS 436
           G +        ++ GL  S
Sbjct: 526 GWKPDIITYSTLIGGLYES 544



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 188/428 (43%), Gaps = 49/428 (11%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
           FDA       +R  G SP    ++ ++   A    LL      +   +    P DV    
Sbjct: 30  FDAA------VRRPGFSPSSAVFHHILRRVAADPGLLLAHAPRIIAAIHCPCPEDV--PL 81

Query: 117 SLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           +L+    +   P+EA  VFQ M  + G  +P   +FN +LN   ++     A   F+  +
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFG-CSPTIRSFNTLLNAFVESHQWARAENFFKYFE 140

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                P + TYN+L+K +CK G     R +L  +  +G +P+ ITY T++    ++    
Sbjct: 141 AARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLG 200

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL-DIVSYNTL 293
             LE+   M+ +G   D   Y  +I  F K G   +A +  E+++ + +    +VSYN +
Sbjct: 201 FALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVM 260

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+  CK G+      + + M+K   +CD +T++ LI GL +AG++ GAR   E M   G 
Sbjct: 261 ISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320

Query: 354 DS----------------------------------NLEAYNCIVDRLGKDGKIDHAINV 379
                                               N+ +YN  +  L ++GK+D A+ +
Sbjct: 321 RPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMML 380

Query: 380 FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC--LKSGVRILKSAQKAVVDGLRHSG 437
           ++ +   DS TY  +VH LC    +  A ++L      + G+ + + A  ++++ L   G
Sbjct: 381 WDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEG 440

Query: 438 CRREAKKI 445
              EA  +
Sbjct: 441 RLDEADGV 448



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/433 (22%), Positives = 182/433 (42%), Gaps = 79/433 (18%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P VV+YN++I   C+   F  G  I  RM++     D+ TY++LI G +    L  + 
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGAR 309

Query: 98  DLLDEMLEMGIPPDV----------------------W------------SYNSLMHCLF 123
            + +EM+  G+ PDV                      W            SYN  +  LF
Sbjct: 310 KVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLF 369

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--GFVPE 181
           + GK D+A  ++  ++  D    +AT+ ++++GLC N Y + AL++    +    G   +
Sbjct: 370 ENGKVDDAMMLWDGLLEAD----SATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVD 425

Query: 182 LVTYNILIKGLCKAGRLR-----------------------------------TARWILK 206
              Y+ LI  LCK GRL                                    +A  + +
Sbjct: 426 EFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFR 485

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+   G +   ++Y  ++    R  +++   + ++ M  KG+  D   Y T+I    +  
Sbjct: 486 EMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESN 545

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC-DKYTH 325
            +  A     Q +  G + DI+ YN +I+  C  GK+E A  L   + ++  +C +  TH
Sbjct: 546 MMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQK--KCVNLVTH 603

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
             +++G  K GN + A     ++ +     ++ +YN  +  L   G++  A+   +   V
Sbjct: 604 NTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALV 663

Query: 386 KDSFTYSSMVHNL 398
           +  F  +++  N+
Sbjct: 664 R-GFLPTAITWNI 675



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K ++ + N+ +  F K ++L+ A  +  +    G    VV+YN+LI+   +   F   Y 
Sbjct: 458 KFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYD 517

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +N M E G  PD++TY++LI G   ++++  +L L  + L+ G  PD+  YN ++H L 
Sbjct: 518 CVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLC 577

Query: 124 QLGKPDEANRVFQDM---ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
             GK ++A +++  +    C +L     T N ++ G  K    + A +++  + +    P
Sbjct: 578 SSGKVEDALQLYSTLRQKKCVNLV----THNTIMEGFYKVGNCEMASKIWAHILEDELQP 633

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           ++++YNI +KGLC  GR+  A   L +    G  P AIT+  +++
Sbjct: 634 DIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVR 678



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 159/377 (42%), Gaps = 66/377 (17%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI----- 73
           +A  L  A  +  + +  GV PDVVT N +++  C+  + +  + +   M +  +     
Sbjct: 301 EAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRS 360

Query: 74  -------------------------SPDVVTYNSLIAGATRNSLLSCSLDLLDEM--LEM 106
                                      D  TY  ++ G   N  ++ +L +L+E    E 
Sbjct: 361 YNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREG 420

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           G+  D ++Y+SL++ L + G+ DEA+ V + M        +   N++++G  K+   D+A
Sbjct: 421 GMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSA 480

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           +++FR +   G    +V+YNILI GL +A R R A   + E+ + G  P+ ITY+T++  
Sbjct: 481 VKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGG 540

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGY---------------------------C--- 256
            + +      L +       G+  D   Y                           C   
Sbjct: 541 LYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNL 600

Query: 257 ----TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
               T++  F K+G  + A+     ++ D +Q DI+SYN  +   C  G++  A   LD+
Sbjct: 601 VTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDD 660

Query: 313 MEKQGFECDKYTHTILI 329
              +GF     T  IL+
Sbjct: 661 ALVRGFLPTAITWNILV 677


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 186/410 (45%), Gaps = 39/410 (9%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY  LI+AYC      A    L  +  AG++PD   Y S + G  R  +L+ +  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G     ++Y +L+H L   G   EA  VF  M      P T  +  M++GLC+   T
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A  +      +GF P +V YN LI G C AG +  A  + + +  +  +PN  TYT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +                             G C       K G+++ A     +MV  G+
Sbjct: 254 IH----------------------------GLC-------KSGKVERAMVLFSRMVEAGL 278

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V+Y  LI   C EG L+ A+ LL  ME  G   + +T ++LID LCK   ++ A+L
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
            L  + K G   N   Y  ++D L K GKID A  + + M     V D+ +YSS++  LC
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + K+L  A+ +L   ++ G++        ++D L         KKI  K+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 215/453 (47%), Gaps = 20/453 (4%)

Query: 11  NICVCTFCKANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           N  +  +C A  +E A  +   +DG R    P+V TY  LI   C+    +    + +RM
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCS--PNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            EAG+ P+VVTY +LI G      L C+  LL  M   G+ P+ W+++ L+  L +  K 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA      ++   +      +  +++GLCK    D A  + + +   GFVP+  +Y+ L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I GLC+  +L  A  +L+++ + G   + +TYT I+    R    +   +I   M   G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y   + ++ + GR+++A   + QMV  GV  ++V+YNTLI  Y   G +  A+ 
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 309 LLDEMEKQGFECDKYTHTILID------------GLCKAGNIKGARLHLEYMNKIGFDSN 356
             + M  +G++ ++ ++T+L+              + K  ++K  ++ LE + +      
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
            + Y+C +  L +  +++ A + F  M+          Y+S++   C+ K L  A  LL 
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLD 633

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S  KSG      + + ++  L   G  R AK++
Sbjct: 634 SMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 198/416 (47%), Gaps = 4/416 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R     +  +C A  +  A+  +   +  G+ PD   Y   +  YC+         +   
Sbjct: 73  RTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVL 132

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G      TY +L+ G     ++  ++ +   M      PD   Y +++H L + G+
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  + ++ +     P    +N +++G C     ++AL++F G+  +   P + TY  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK+G++  A  +   + ++G  PN +TYT +++        +    +L  M+  G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              + + +  +I A  K  +++EA  ++  +V  GV+++ V Y +LI+  CK GK++AA 
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+ +M  +GF  D ++++ LIDGLC+   +  A L LE M + G  ++   Y  I+D L
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432

Query: 368 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            ++   +    +F+ M       D  TY+  V + C+  R+  A  +++  +  GV
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 196/431 (45%), Gaps = 16/431 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A R E+AE ++ + +  G  P++V YN LID YC     +    +   M     SP+
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI G  ++  +  ++ L   M+E G+ P+V +Y +L+      G    A R+  
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L P   TF+++++ LCK    + A      L K G     V Y  LI GLCK G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A  +++++   G  P+A +Y++++    R +K      +L  M  KG       Y 
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I   V+    +      ++M+  G+  DIV+Y   +  YC+EG++E A  ++ +M  +
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR 486

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G   +  T+  LI G    G +  A    E M   G+  N ++Y  ++  + K    D++
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546

Query: 377 INVFESMEVKD----------------SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +++++  ++KD                +  YS  +  LC+  RL  A    +    + + 
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606

Query: 421 ILKSAQKAVVD 431
             +    +++D
Sbjct: 607 PSEDVYTSIID 617



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 160/357 (44%), Gaps = 6/357 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD   Y  ++   C+    +    +L      G  P++V YN+LI G      +  +L +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            + M      P+V +Y  L+H L + GK + A  +F  M+   L P   T+  ++ G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             +   A R+   ++ +G VP   T+++LI  LCK  ++  A+  L  L   G   N + 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT+++    +  K     E++  M  +G+  D   Y ++I    +  +L +AT  +E M+
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+Q   V+Y  +I+   +E   E    + D+M   G   D  T+T+ +   C+ G ++
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK------DSFT 390
            A   +  M   G   NL  YN ++      G +  A + FE M  K      DS+T
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 175/391 (44%), Gaps = 16/391 (4%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G++P+  T+++LIDA C+    +     L  + + G+  + V Y SLI G  +   +  +
Sbjct: 312 GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAA 371

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L+ +M+  G  PD  SY+SL+  L +  K  +A  + +DM+   +     T+ I+++ 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           L +   ++   ++F  +   G  P++VTY + ++  C+ GR+  A  ++ ++ D G  PN
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK------------ 264
            +TY T+++                 M  KG+  +   Y  ++   VK            
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           I  +K+    +E +    + L    Y+  I   C+  +LE A      M+       +  
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           +T +ID  C+   +  A   L+ M K G+  +LE+Y  I+  L + G    A  VF  + 
Sbjct: 612 YTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLL 671

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +K    D   +  +++ L +   +   S LL
Sbjct: 672 LKESNYDEIVWKILIYGLLQKGSVAEFSSLL 702



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 155/394 (39%), Gaps = 47/394 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +   CK  ++E+A+  +   ++ GV  + V Y  LID  C+    DA   ++ +M 
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD  +Y+SLI G  R   LS +  +L++M+E GI     +Y  ++  L +    +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
              ++F  MI   + P   T+ + +   C+    ++A  M   +   G  P LVTYN LI
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI---------- 239
           +G    G +  A    + +   G  PN  +YT +++   +       ++I          
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQ 559

Query: 240 --LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
             L  +  +        Y   I    ++ RL+EA  +   M    +      Y ++I+  
Sbjct: 560 VLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCC 619

Query: 298 CKEGKLEAAYLLLDEMEKQGF-----------------------------------ECDK 322
           C+   L  A  LLD M K G+                                     D+
Sbjct: 620 CRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDE 679

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
               ILI GL + G++      L  M + G+  +
Sbjct: 680 IVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS 713



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%)

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME + +     ++ +Y TLIN YC  G + AA   L  +   G   D Y +T  + G C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AG +  A      M   G       Y  ++  L   G +  A+ VF  M       D+  
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y++MVH LC+A R   A  LL   + +G         A++DG  ++G    A K+
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 1/147 (0%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y+  I   C+    +        M+ A ++P    Y S+I    R  +L+ +L LLD M 
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMT 636

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           + G  P + SY  ++  L + G    A  VF D++  +       + I++ GL +     
Sbjct: 637 KSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVA 696

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKG 191
               +   +++HG+ P   T N +I G
Sbjct: 697 EFSSLLSVMKEHGYQPS-NTINAMITG 722


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 190/382 (49%), Gaps = 40/382 (10%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           ++LGV+ ++  YN+L+ A  +    +    +L+ M E G+ PD+ TYN+LI+   + S+ 
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L + D M   G+ P++ +YNS +H   + G+  EA R+F++ I  D+T    T+  +
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTL 313

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++G C+    D ALR+   ++  GF P +VTYN +++ LC+ GR+R A  +L E+     
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ IT  T+                                   I A+ KI  +  A  
Sbjct: 374 EPDNITCNTL-----------------------------------INAYCKIEDMVSAVK 398

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++M+  G++LD+ SY  LI+ +CK  +LE A   L  M ++GF     T++ L+DG  
Sbjct: 399 VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFY 458

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
                      LE   K G  +++  Y  ++ R+ K  ++D+A  +FESME    V DS 
Sbjct: 459 NQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSV 518

Query: 390 TYSSMVHNLCKAKRLPSASKLL 411
            +++M +   +  ++  AS L 
Sbjct: 519 IFTTMAYAYWRTGKVTEASALF 540



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 183/386 (47%), Gaps = 7/386 (1%)

Query: 40  PDVVT--YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           P+ V+  ++ L+  Y +    +    +  ++R  G+ P +     L+    +  L     
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            +  +M+++G+  ++  YN L+H   + G P++A ++  +M    + P   T+N +++  
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK      AL +   +++ G  P +VTYN  I G  + GR+R A  + +E+ D   A N 
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA-NH 307

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +TYTT++    R       L +   M+ +G++     Y +++    + GR++EA   + +
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M    ++ D ++ NTLIN YCK   + +A  +  +M + G + D Y++  LI G CK   
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 393
           ++ A+  L  M + GF      Y+ +VD      K D    + E  E +    D   Y  
Sbjct: 428 LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRG 487

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++  +CK +++  A  L  S  K G+
Sbjct: 488 LIRRICKLEQVDYAKVLFESMEKKGL 513



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 24/393 (6%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS-YN 116
           F   + +L+++ +  +    +   SL+ G + +                  P DV   ++
Sbjct: 96  FKTAHQLLDKLAQRELLSSPLVLRSLVGGVSED------------------PEDVSHVFS 137

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
            LM    + G  +++  VF+ +    L P      ++LN L K R TD   ++F+ + K 
Sbjct: 138 WLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKL 197

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
           G V  +  YN+L+    K+G    A  +L E+ + G  P+  TY T++    +   +   
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L +   M+R G   +   Y + I  F + GR++EAT    + + D V  + V+Y TLI+ 
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDG 316

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           YC+   ++ A  L + ME +GF     T+  ++  LC+ G I+ A   L  M+    + +
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD 376

Query: 357 LEAYNCIVDRLGKDGKIDHAINV----FESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
               N +++   K   +  A+ V     ES    D ++Y +++H  CK   L +A + L 
Sbjct: 377 NITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF 436

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S ++ G     +    +VDG  +   + E  K+
Sbjct: 437 SMIEKGFSPGYATYSWLVDGFYNQNKQDEITKL 469



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 1/288 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F +  R+ +A  +  + I+  V  + VTY  LID YC+    D    +   M  
Sbjct: 277 NSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SP VVTYNS++     +  +  +  LL EM    I PD  + N+L++   ++     
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +V + MI   L     ++  +++G CK    +NA      + + GF P   TY+ L+ 
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G     +      +L+E    G   +   Y  +++   +  +      +  +M++KG   
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           D   + T+  A+ + G++ EA+   + M    + +++  Y ++   Y 
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYA 563


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 179/348 (51%), Gaps = 4/348 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L++ C    CK   +EKA+ +  +  +LG++ +  TY +LI+   +      G+ +  
Sbjct: 202 TTLIDGC----CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYE 257

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M+E G+ P++ TYN ++    ++     +  + DEM E G+  ++ +YN+L+  L +  
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREM 317

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K +EAN+V   M    + P   T+N +++G C       AL + R L+  G  P LVTYN
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           IL+ G C+ G    A  ++KE+ + G  P+ +TYT ++    R+   +  +++  +M+  
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  +I  F   G++ EA+   + MV    + + V YNT+I  YCKEG    A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             LL EME++    +  ++  +I+ LCK    K A   +E M   G D
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 204/413 (49%), Gaps = 7/413 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K   RL  + + ++ ++  L  + +   + +  G +P    +N L+       SF+  ++
Sbjct: 91  KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             N   ++ +  DV ++  LI G      +  S DLL E+ E G  P+V  Y +L+    
Sbjct: 151 FFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ ++A  +F +M    L     T+ +++NGL KN        M+  +Q+ G  P L 
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN ++  LCK GR + A  +  E+ + G + N +TY T++    R  K     +++  M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K  G   +   Y T+I  F  +G+L +A      + + G+   +V+YN L++ +C++G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNC 362
             A  ++ EME++G +  K T+TILID   ++ N++ A +L L  M ++G   ++  Y+ 
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS-MEELGLVPDVHTYSV 448

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++      G+++ A  +F+SM  K    +   Y++M+   CK      A KLL
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 192/386 (49%), Gaps = 4/386 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V+ DV ++ +LI   C+    +  + +L  + E G SP+VV Y +LI G  +   +  + 
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           DL  EM ++G+  +  +Y  L++ LF+ G   +   +++ M    + P   T+N ++N L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK+  T +A ++F  +++ G    +VTYN LI GLC+  +L  A  ++ ++   G  PN 
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           ITY T++       K    L +   +K +G +     Y  +++ F + G    A   +++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G++   V+Y  LI+ + +   +E A  L   ME+ G   D +T+++LI G C  G 
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSS 393
           +  A    + M +   + N   YN ++    K+G    A+ + + ME K+      +Y  
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGV 419
           M+  LCK ++   A +L+   + SG+
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGI 544



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 182/376 (48%), Gaps = 5/376 (1%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y ++I++Y Q  S +   +  N M + G  P    +N L+     +S  +      +E  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           +  +  DV+S+  L+    + G+ +++  +  ++     +P    +  +++G CK    +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A  +F  + K G V    TY +LI GL K G  +    + +++ + G  PN  TY  +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               ++ + K   ++   M+ +G + +   Y T+I    +  +L EA   ++QM +DG+ 
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            ++++YNTLI+ +C  GKL  A  L  +++ +G      T+ IL+ G C+ G+  GA   
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
           ++ M + G   +   Y  ++D   +   ++ AI +  SME    V D  TYS ++H  C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 401 AKRLPSASKLLLSCLK 416
             ++  AS+L  S ++
Sbjct: 456 KGQMNEASRLFKSMVE 471



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 110/207 (53%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC   +L KA ++  D    G+ P +VTYN+L+  +C+         ++  M E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI P  VTY  LI    R+  +  ++ L   M E+G+ PDV +Y+ L+H     G+ +E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+R+F+ M+  +  P    +N M+ G CK   +  AL++ + +++    P + +Y  +I+
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNA 217
            LCK  + + A  +++++ DSG  P+ 
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPST 548


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 183/364 (50%), Gaps = 3/364 (0%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           VTYN+LI  +C     DA +++L  M   G+  +  T + ++ G  R   ++ +L+  D 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 103 MLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCKN 160
            LE+    PDV SY +L++ L +LG+ D A  +F+ M+  G   P   T+N +++GLCK 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A  +    +K  F P++VTYN L+  L + GR+  A     ++ + G+ P  +++
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             I+    R R+    LE+ + M  + +  +   Y  VI    K  +L EA   +++MV+
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +G + D+V+Y  L+  +   G+L++A  LL  M  QG   D  T+T++ID LCK G +  
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-FTYSSMVHNLC 399
           A      +       N+  Y+ ++    +  ++D    V   M  + +  TY++M+  L 
Sbjct: 326 AHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLS 385

Query: 400 KAKR 403
              R
Sbjct: 386 MVDR 389



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 147/315 (46%), Gaps = 38/315 (12%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   CK +RL+ A A+I +  +    PDVVTYN L+ A  Q    D       +M E
Sbjct: 136 NALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 195

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P +V++N++I G  R   L+ +L++ +EM++    P++ +Y+ ++  L +  + DE
Sbjct: 196 EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDE 255

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M+     P    +  ++ G       D+AL + R +   G +P++VTY ++I 
Sbjct: 256 AQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVID 315

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK GR+  A  I +EL  +  +PN +TY+ ++                          
Sbjct: 316 KLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG------------------------- 350

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
              GYC       +  R+ E    M +M     + ++V+YNT+I       + E AY + 
Sbjct: 351 ---GYC-------RASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMF 397

Query: 311 DEMEKQGFECDKYTH 325
            EM + GF  D  T+
Sbjct: 398 REMSECGFVPDARTY 412



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 146/331 (44%), Gaps = 42/331 (12%)

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           + + G  ++A ++F++  C  L   + T+N+++ G C     D A  + R +   G    
Sbjct: 1   MVRAGSHNQALQLFRENPC-QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 182 LVTYNILIKGLCKAGRLRTA-------------------------------------RWI 204
             T +I+++GLC+ GR+  A                                        
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            K +   G  PNA TY  ++    +  +      +++  +++ +  D   Y T++AA  +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           +GR+ EA     QM  +G    +VS+N +I   C+  +L  A  + +EM  + F  +  T
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ++++IDGLCK+  +  A+  L+ M   G   +L AY  +V      G++D A+ +   M 
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 385 ----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               + D  TY+ ++  LCK  R+  A ++ 
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIF 330



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 32/215 (14%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +   C+A RL  A  +  + I     P++VTY+++ID  C+    D    +L+RM 
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD+V Y  L+ G +    L  +L LL  M+  G  PDV +Y  ++  L ++G+ D
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN------------------------ 165
           +A+ +F++++    +P   T++ ++ G C+    D                         
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGL 384

Query: 166 --------ALRMFRGLQKHGFVPELVTYNILIKGL 192
                   A  MFR + + GFVP+  TY  L + L
Sbjct: 385 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           V+YN LI  +C    L+AA+ LL EM+ +G +C+  T +I++ GLC+ G +  A  H + 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 348 MNKIGF-DSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-----KDSFTYSSMVHNLCKA 401
             ++     ++ +Y  +++ L K G++D A ++F  M        ++FTY+++V  LCK 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 402 KRLPSASKLLLSCLK 416
            RL +A  ++    K
Sbjct: 146 DRLDAARAVITEARK 160



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R++ A  I  + +     P+VVTY+ LI  YC+    D G  +   MRE    P+
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPN 373

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           VVTYN++I G +       +  +  EM E G  PD  +Y  L   L  + +P
Sbjct: 374 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDQP 425


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 198/424 (46%), Gaps = 10/424 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD   +N L+DA  Q         +   MR+A + P+VVTY  L+ G  +   +  +L +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 100 LDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLN 155
           LD M   E  + PDV   N+++  L + G+  +A +  ++ +       P T T+N + +
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C+      A  +   ++K    P  VT N ++ GLC  GR+  A    +E        
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEA 314

Query: 216 --NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
             NA+TY+T++          + +E+   M  +G + D   Y T+I+   + GRL +A  
Sbjct: 315 RGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWS 374

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M   G QLD  +YN LI  +C+  +L  AY LL EM++ G + D YT+  L+ GLC
Sbjct: 375 MATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLC 434

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           KAG+       L  M   G   ++  +  ++    K G+ID A+ +F SM+      ++ 
Sbjct: 435 KAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTV 494

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            Y++++  LCK++    A +L     +  V    +   A++ GLR      +A ++   +
Sbjct: 495 IYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLM 554

Query: 450 RMAK 453
           R  +
Sbjct: 555 REGR 558



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 182/393 (46%), Gaps = 15/393 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR--EAGISPDVVTYNSLIAGATRNSLLSC 95
           V P+VVTY +L+   C+        ++L+ M   E+ + PDVV  N+++ G  +   L  
Sbjct: 168 VRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQ 227

Query: 96  SLDLLDEMLEM--GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           ++  ++E +    G  P+  +YN L H   + G    A  +   M    +TP   T N +
Sbjct: 228 AVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTI 287

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPE----LVTYNILIKGLCKAGRLRTARWILKELG 209
           + GLC       AL  FR  +K    PE     VTY+ L+        +  A  +  E+ 
Sbjct: 288 VGGLCWVGRVGAALEFFR--EKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMV 345

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D G++P+AI Y T++    +  +      + ++MK+ G+  D   Y  +I  F +  RL 
Sbjct: 346 DEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLN 405

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + + +M   G+Q D+ +YNTL++  CK G   A   LL +M   G      T   LI
Sbjct: 406 EAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLI 465

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
            G CK G I  A      M++ G   N   YN ++D L K      AI +F+ M  K   
Sbjct: 466 HGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVP 525

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +  T+++++  L + K +P  +  L+  ++ G
Sbjct: 526 ANVTTFNALLKGL-RDKNMPEKAFELMDLMREG 557



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 155/332 (46%), Gaps = 10/332 (3%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L D +     PPD  ++N+L+  L Q G      ++F  M    + P   T+ I++ GLC
Sbjct: 124 LRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLC 183

Query: 159 KNRYTDNALRMFRGLQ--KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH--A 214
           K     +AL +  G+   +    P++V  N ++ GLCK GRL+ A   ++E   S H  A
Sbjct: 184 KAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCA 243

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +TY  +     R     +  E+++ M+++  T +     T++     +GR+  A ++
Sbjct: 244 PNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEF 303

Query: 275 MEQ--MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             +   V    + + V+Y+TL+  +     +  A  L  EM  +G   D   +  +I GL
Sbjct: 304 FREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGL 363

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
            +AG +  A      M K GF  + +AYN ++    +  +++ A  +   M+      D 
Sbjct: 364 TQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDV 423

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           +TY++++  LCKA    +  +LL   +  G R
Sbjct: 424 YTYNTLLSGLCKAGDFLAVDELLGKMIDGGCR 455



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 16/334 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRL--GVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +LN  V   CK  RL++A   + + +R   G  P+ VTYN L  A+C+  +      ++ 
Sbjct: 211 MLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVA 270

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW--------SYNSL 118
           +M +  ++P+ VT N+++ G      +  +L+   E         VW        +Y++L
Sbjct: 271 KMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRT------VWPEARGNAVTYSTL 324

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +           A  +F +M+    +P    +  M++GL +    D+A  M   ++K GF
Sbjct: 325 VGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGF 384

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
             +   YNILI G C+  RL  A  +L E+ ++G  P+  TY T++    +   +    E
Sbjct: 385 QLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDE 444

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +L  M   G       + T+I  + K+G++ EA      M   G+Q + V YNTLI+  C
Sbjct: 445 LLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLC 504

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           K      A  L DEM ++    +  T   L+ GL
Sbjct: 505 KSRDTSLAIELFDEMREKHVPANVTTFNALLKGL 538



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 117/267 (43%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V  F   N +  A  +  + +  G  PD + Y  +I    Q    D  +++   M++AG 
Sbjct: 325 VGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGF 384

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
             D   YN LI G  R   L+ + +LL EM E G+ PDV++YN+L+  L + G     + 
Sbjct: 385 QLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDE 444

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   MI G   P   TF  +++G CK    D ALR+FR + + G  P  V YN LI  LC
Sbjct: 445 LLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLC 504

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+     A  +  E+ +     N  T+  ++K        +   E++  M+    T D  
Sbjct: 505 KSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYV 564

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVT 280
               ++     IG       +M+   T
Sbjct: 565 TIDILMEWLPVIGETDRLKHFMQHDTT 591



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L  +  NI +  FC+  RL +A  ++ +    G+ PDV TYN L+   C+   F A   
Sbjct: 385 QLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDE 444

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M + G  P VVT+ +LI G  +   +  +L +   M E GI P+   YN+L+  L 
Sbjct: 445 LLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLC 504

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +      A  +F +M    +     TFN +L GL      + A  +   +++    P+ V
Sbjct: 505 KSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYV 564

Query: 184 TYNILIKGLCKAGR 197
           T +IL++ L   G 
Sbjct: 565 TIDILMEWLPVIGE 578



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK  ++++A  I       G+ P+ V YN LID  C+         + + MRE  +  +
Sbjct: 468 YCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPAN 527

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V T+N+L+ G    ++   + +L+D M E    PD  + + LM  L  +G+ D      Q
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQ 587

Query: 137 DMICGDLTP 145
                D TP
Sbjct: 588 H----DTTP 592


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 193/440 (43%), Gaps = 40/440 (9%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             C+A  ++ A A++ +  R G+ P VVTYN+L+DA C+    +  + +  RM E  + P
Sbjct: 220 ALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRP 279

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            +VT+  LI+G  R         +L EM   GI P+   YN ++    + G   EA ++F
Sbjct: 280 SIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLF 339

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNA----------------------------- 166
            +M+   +     T+N++   LCK    ++A                             
Sbjct: 340 DEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRG 399

Query: 167 -------LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
                  LR+ R +      P        I+ LCK+G+   A  I  ++   G   N  T
Sbjct: 400 TGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVAT 459

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
              ++    +    K   ++L AM   G   D   Y  +I    K  ++ EA    + M+
Sbjct: 460 SNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI 519

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G + D+ ++N  ++ YC  GK+E    LLD+M+ +G + D  T+  +IDG CKA ++ 
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMH 579

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMV 395
            A  +L  + K G   N   YN ++   G++G I  AI + ++M+         TY+S++
Sbjct: 580 KANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639

Query: 396 HNLCKAKRLPSASKLLLSCL 415
           + +C A  +     +   C+
Sbjct: 640 YWMCHAGLVEEVKAVFAQCI 659



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 195/405 (48%), Gaps = 5/405 (1%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V PDV TY  +I A C+    DA + +L  +R +GI P VVTYN L+    ++  +  + 
Sbjct: 207 VAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAF 266

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L   M+E  + P + ++  L+  L +  +  E   V Q+M    +TP    +N M+   
Sbjct: 267 RLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWH 326

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           C+  +   AL++F  +   G    +VTYN++ K LCK G +  A  IL E+  +G   + 
Sbjct: 327 CRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHC 386

Query: 218 ITYTTIMKCCFRNR-KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             + +++    R   +  L L ++  M  +    +       I    K G+ +EA +   
Sbjct: 387 SLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWF 446

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           Q++  G+ +++ + N LI+  C+   ++ A  +L  M   G E D+ T+ I+I G CKA 
Sbjct: 447 QVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKAS 506

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            +  A    + M K GF  +L  +N  +      GK++  +++ + M+ +    D  TY 
Sbjct: 507 KMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYG 566

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +++   CKAK +  A++ L   +K+G+R       A++ G   +G
Sbjct: 567 TIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNG 611



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 166/364 (45%)

Query: 2   FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           F K +  L+  C+   CK+ + E+A  I    +  G+  +V T N LI   CQ  +    
Sbjct: 417 FLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEA 476

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             +L  M  +G+  D +TYN +I G  + S +  ++ L D+M++ G  PD++++N  +H 
Sbjct: 477 TKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHT 536

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
              LGK +E   +   M    L P   T+  +++G CK +    A      L K+G  P 
Sbjct: 537 YCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPN 596

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            V YN LI G  + G +  A  IL  +  +G  P  +TY ++M         +    + +
Sbjct: 597 AVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFA 656

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
               K       GY  +I  F KIG++ EA  Y ++M + G+  + ++Y TL+  Y K G
Sbjct: 657 QCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSG 716

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             E A  L DEM   G   D  ++  LI G C+  ++         M+      +  +YN
Sbjct: 717 NKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYN 776

Query: 362 CIVD 365
             VD
Sbjct: 777 AFVD 780



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 206/475 (43%), Gaps = 40/475 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK+ R+E+A  +    +   V P +VT+ +LI    +   F     +L  M+ 
Sbjct: 250 NVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQG 309

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN-------------- 116
            GI+P+ V YN +I    R    S +L L DEM+  GI   V +YN              
Sbjct: 310 FGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 369

Query: 117 ------------SLMHC-LFQ---------LGKPDEANRVFQDMICGDLTPCTATFNIML 154
                        ++HC LF           G+ D   R+ ++M+   L P  A     +
Sbjct: 370 AEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACI 429

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             LCK+   + A  ++  +   G    + T N LI GLC+   ++ A  +LK + +SG  
Sbjct: 430 QELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVE 489

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + ITY  +++ C +  K    +++   M ++G+  D F +   +  +  +G+++E    
Sbjct: 490 LDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHL 549

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++QM ++G++ DIV+Y T+I+ YCK   +  A   L E+ K G   +   +  LI G  +
Sbjct: 550 LDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGR 609

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFT 390
            GNI  A   L+ M   G       YN ++  +   G ++    VF    VKD       
Sbjct: 610 NGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIG 669

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y+ ++   CK  ++  A          G+   K     ++     SG + EA K+
Sbjct: 670 YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKL 724



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 144/345 (41%), Gaps = 46/345 (13%)

Query: 146 CTATFNIMLNGLCKNRYTDNALR----MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           CTAT ++++   C N     +L      F  L   G  P + T +IL++ L   G+L  A
Sbjct: 136 CTATADLLVRA-CLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVA 194

Query: 202 RWILKELGDSGH-APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           R +  E+ D    AP+  TYT ++K   R  +      +L+ ++R G       Y  ++ 
Sbjct: 195 RKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMD 254

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVS------------------------------- 289
           A  K GR++EA     +MV   V+  IV+                               
Sbjct: 255 ALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITP 314

Query: 290 ----YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
               YN +I  +C++G    A  L DEM  +G +    T+ ++   LCK G ++ A   L
Sbjct: 315 NEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKIL 374

Query: 346 EYMNKIGFDSNLEAYNCIVD-RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           + M   G   +   +N +V   L   G++D  + +   M  +    +    ++ +  LCK
Sbjct: 375 DEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCK 434

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + +   A+++    L  G+ +  +   A++ GL      +EA K+
Sbjct: 435 SGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKV 479



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 36/73 (49%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            + K+   E+A  +  + + LG++PD V+YN LI  +C+  S D        M    +  
Sbjct: 711 AYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQ 770

Query: 76  DVVTYNSLIAGAT 88
           D  +YN+ + G T
Sbjct: 771 DGCSYNAFVDGIT 783



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPS 406
           G   +++  + +V+ LG  G++D A  VF  M        D  TY++M+  LC+A  + +
Sbjct: 170 GASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDA 229

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           A  +L    +SG++        ++D L  SG   EA +++ ++   ++
Sbjct: 230 AFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRV 277


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 186/410 (45%), Gaps = 39/410 (9%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY  LI+AYC      A    L  +  AG++PD   Y S + G  R  +L+ +  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G     ++Y +L+H L   G   EA  VF  M      P T  +  M++GLC+   T
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + A  +      +GF P +V YN LI G C AG +  A  + + +  +  +PN  TYT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +                             G C       K G+++ A     +MV  G+
Sbjct: 254 IH----------------------------GLC-------KSGKVERAMVLFSRMVEAGL 278

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           + ++V+Y  LI   C EG L+ A+ LL  ME  G   + +T ++LID LCK   ++ A+L
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLC 399
            L  + K G   N   Y  ++D L K GKID A  + + M     V D+ +YSS++  LC
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + K+L  A+ +L   ++ G++        ++D L         KKI  K+
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 198/416 (47%), Gaps = 4/416 (0%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R     +  +C A  +  A+  +   +  G+ PD   Y   +  YC+         +   
Sbjct: 73  RTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVL 132

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G      TY +L+ G     ++  ++ +   M      PD   Y +++H L + G+
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA  + ++ +     P    +N +++G C     ++AL++F G+  +   P + TY  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK+G++  A  +   + ++G  PN +TYT +++        +    +L  M+  G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              + + +  +I A  K  +++EA  ++  +V  GV+++ V Y +LI+  CK GK++AA 
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L+ +M  +GF  D ++++ LIDGLC+   +  A L LE M + G  ++   Y  I+D L
Sbjct: 373 ELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432

Query: 368 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
            ++   +    +F+ M       D  TY+  V + C+  R+  A  +++  +  GV
Sbjct: 433 VREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 181/381 (47%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T +    V   C+A R E+AE ++ + +  G  P++V YN LID YC     +    +  
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M     SP+V TY  LI G  ++  +  ++ L   M+E G+ P+V +Y +L+      G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               A R+   M    L P   TF+++++ LCK    + A      L K G     V Y 
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK G++  A  +++++   G  P+A +Y++++    R +K      +L  M  K
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y  +I   V+    +      ++M+  G+  DIV+Y   +  YC+EG++E A
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             ++ +M  +G   +  T+  LI G    G +  A    E M   G+  N ++Y  ++  
Sbjct: 477 ESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536

Query: 367 LGKDGKIDHAINVFESMEVKD 387
           + K    D+++++++  ++KD
Sbjct: 537 VVKKSSSDNSVDIWKIADMKD 557



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 160/357 (44%), Gaps = 6/357 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PD   Y  ++   C+    +    +L      G  P++V YN+LI G      +  +L +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            + M      P+V +Y  L+H L + GK + A  +F  M+   L P   T+  ++ G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             +   A R+   ++ +G VP   T+++LI  LCK  ++  A+  L  L   G   N + 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           YT+++    +  K     E++  M  +G+  D   Y ++I    +  +L +AT  +E M+
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G+Q   V+Y  +I+   +E   E    + D+M   G   D  T+T+ +   C+ G ++
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK------DSFT 390
            A   +  M   G   NL  YN ++      G +  A + FE M  K      DS+T
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 3/278 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +   CK  ++E+A+  +   ++ GV  + V Y  LID  C+    DA   ++ +M 
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD  +Y+SLI G  R   LS +  +L++M+E GI     +Y  ++  L +    +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
              ++F  MI   + P   T+ + +   C+    ++A  M   +   G  P LVTYN LI
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI--LSAMKR-K 246
           +G    G +  A    + +   G  PN  +YT +++   +       ++I  ++ MK  +
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQ 559

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
              +D   +  +I   ++ G + E +  +  M   G Q
Sbjct: 560 ESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 597



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%)

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ME + +     ++ +Y TLIN YC  G + AA   L  +   G   D Y +T  + G C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
           AG +  A      M   G       Y  ++  L   G +  A+ VF  M       D+  
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           Y++MVH LC+A R   A  LL   + +G         A++DG  ++G    A K+
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 212/431 (49%), Gaps = 16/431 (3%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C++NR+E  E ++ D  R G  PD+   N+ ID  C+         ++ +MR  G 
Sbjct: 232 ISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGT 291

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTY +++     N   S ++ L +EM++MG+ PDV +  +L+  L +  K +EA  
Sbjct: 292 IPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFE 351

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+  ++    + +N +++G  +    D A  +   ++ +G  P +VTYNIL+   C
Sbjct: 352 LASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYC 411

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G +  A  ++ ++  SG  P+  +Y  ++K   +  +       +S     G      
Sbjct: 412 TIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVG------ 465

Query: 254 GYCTVIA------AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           G+C +++      AF K+ ++K A +  ++M   G+Q D V+Y TLIN     G    A 
Sbjct: 466 GFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAE 525

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L ++M K   + +   + I++  LCK G++K A+    +M +     ++  YN ++  L
Sbjct: 526 ELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWL 585

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
           GK+ +   A+++F+ M  K    DS T+  +++ L    R   A ++    +++G+ + +
Sbjct: 586 GKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDR 645

Query: 424 SAQKAVVDGLR 434
              + ++  L+
Sbjct: 646 EVSERLISVLK 656



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 167/373 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK NRL  A  ++      G +PDVVTY  ++   C    F     +   M +
Sbjct: 264 NIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVK 323

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVV   +LI G  +NS +  + +L   ML + I   V  YN+L+   ++ G  D+
Sbjct: 324 MGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDK 383

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M      P   T+NI+LN  C     + A  +   ++  G  P+  +YN L+K
Sbjct: 384 AYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLK 443

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  +L  A   + +  + G   + ++   ++    + +K K  LE+   M  KG   
Sbjct: 444 GLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQA 503

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I     +G    A +  EQM+   +  ++  YN +++  CK G L+ A  + 
Sbjct: 504 DAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIF 563

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M ++    D  T+  LI  L K      A    + M   G + +   +  +++ L  +
Sbjct: 564 LHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDE 623

Query: 371 GKIDHAINVFESM 383
           G+   A  V+E M
Sbjct: 624 GRSTLAYEVWEYM 636



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 182/420 (43%), Gaps = 6/420 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L  I +  + +A + +       + +  G     + YN  I    +   FD     
Sbjct: 153 LHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKY 212

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
                  G+     TY+  I+   +++ +    +LL +M   G  PD+W+ N  + CL +
Sbjct: 213 YGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCK 272

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             +  +A ++ + M      P   T+  ++  LC N+    A+ ++  + K G  P++V 
Sbjct: 273 QNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVA 332

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
              LI GLCK  ++  A  +   +       +   Y  ++   +R         I+S M+
Sbjct: 333 CGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMR 392

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G       Y  ++  +  IG +++A + + +M T GV  D  SYN L+   CK  +L+
Sbjct: 393 TNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLD 452

Query: 305 AAYLLL-DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            A+  + D ME  GF CD  +  ILID  CK   +K A    + M+  G  ++   Y  +
Sbjct: 453 KAFAFVSDHMEVGGF-CDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTL 511

Query: 364 VDRLGKDGKIDHAINVFESM---EVKDSFT-YSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L   G  + A  +FE M   ++  +   Y+ M+H+LCK   L  A K+ L  ++  +
Sbjct: 512 INGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEI 571



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 136/283 (48%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS  + N  +  F +A  ++KA  II      G  P VVTYN+L++ YC     +    
Sbjct: 362 ELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAEN 421

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++ +M  +G++PD  +YN L+ G  +   L  +   + + +E+G   D+ S N L+    
Sbjct: 422 LITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFC 481

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++ K   A  +F++M    +     T+  ++NGL    Y + A  +F  + K    P + 
Sbjct: 482 KVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVN 541

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YNI++  LCK G L+ A+ I   +      P+ +TY T++    +N +    L++   M
Sbjct: 542 LYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDM 601

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
           + KG   D   +  +I   +  GR   A +  E M+ +G+ LD
Sbjct: 602 RTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILD 644



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 170/395 (43%), Gaps = 39/395 (9%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L  +R  G++     Y  L++G  R       +   DEM+  G       YN  +  L 
Sbjct: 142 FLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLI 201

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    D   + +   +   L     T++  ++ LC++   +    +   + + GF P++ 
Sbjct: 202 KNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIW 261

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
             NI I  LCK  RL  A  +++++   G  P+ +TYTT++ C   N+++   + +   M
Sbjct: 262 ACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEM 321

Query: 244 KRKGYTFDG-------FGYC----------------------------TVIAAFVKIGRL 268
            + G   D        FG C                             +I+ F + G +
Sbjct: 322 VKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSI 381

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            +A   +  M T+G +  +V+YN L+N YC  G +E A  L+ +ME  G   D+Y++  L
Sbjct: 382 DKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQL 441

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           + GLCK   +  A   +    ++G   ++ + N ++D   K  K+  A+ +F+ M+ K  
Sbjct: 442 LKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGM 501

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             D+ TY ++++ L        A +L    LK+ +
Sbjct: 502 QADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQI 536



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N++++GL  +       W  +      H+  AI Y  I+   F +  + L  E L  ++ 
Sbjct: 91  NLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAY--IVSLLFVDGNFALLSEFLGTVRS 148

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G       Y  +++ +V+ G+        ++MV  G +   + YN  I +  K    + 
Sbjct: 149 QGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDL 208

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
                     +G     +T++  I  LC++  I+     L  M++ GF  ++ A N  +D
Sbjct: 209 VEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYID 268

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            L K  ++  A+ + E M     + D  TY+++V  LC  KR   A  L    +K G++ 
Sbjct: 269 CLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKP 328

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
              A  A++ GL  +    EA ++ S++
Sbjct: 329 DVVACGALIFGLCKNSKVEEAFELASRM 356


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 184/376 (48%), Gaps = 42/376 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY---TILN 66
            N+ +   CK  ++ KA  ++ D    G  P+VV+YN LID YC+       Y    +L 
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M E  +SP++ T+N LI G  ++  L  SL +  EML+  + P+V +YNSL++ L   G
Sbjct: 286 EMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGG 345

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRG-------------- 172
           K +EA  +   M+   + P   T++ ++NG CKN     AL MF                
Sbjct: 346 KINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYN 405

Query: 173 ---------------------LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
                                +++ G VP++ TYN LI GLC+ G +  A+ +  +L + 
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465

Query: 212 GHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           G  P+ +T+  +M+  C R    K  + +L  M + G       Y  ++  + K G LK 
Sbjct: 466 G-LPDLVTFHILMEGYCSRGESRKAAM-LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKA 523

Query: 271 ATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           AT+   QM  +  +++++ SYN L+  Y ++GKLE A +LL+EM ++G   ++ T+ I+ 
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK 583

Query: 330 DGLCKAGNIKGARLHL 345
           + +   G +     HL
Sbjct: 584 EEMVDKGFVPDIEGHL 599



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 189/379 (49%), Gaps = 9/379 (2%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KLS       +    K NR    E +  + IR  + P+V T+N++I+A C+    +    
Sbjct: 185 KLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244

Query: 64  ILNRMREAGISPDVVTYNSLIAGATR---NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
           ++  M+  G SP+VV+YN+LI G  +   N  +  +  +L EM+E  + P++ ++N L+ 
Sbjct: 245 VMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILID 304

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
             ++      + +VF++M+  D+ P   T+N ++NGLC     + A+ M   +   G  P
Sbjct: 305 GFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQP 364

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            L+TY+ LI G CK G ++ A  +   +   G  P    Y  ++    +  K   G  + 
Sbjct: 365 NLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALK 424

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M+R+G   D   Y  +IA   + G ++ A    +Q+   G+  D+V+++ L+  YC  
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSR 483

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA---RLHLEYMNKIGFDSNL 357
           G+   A +LL EM K G +    T+ I++ G CK GN+K A   R  +E   ++    N+
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRM--NV 541

Query: 358 EAYNCIVDRLGKDGKIDHA 376
            +YN ++    + GK++ A
Sbjct: 542 ASYNVLLQGYSQKGKLEDA 560



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 167/345 (48%), Gaps = 43/345 (12%)

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG---KPD 129
           I P+V T+N +I    +   ++ + D++++M   G  P+V SYN+L+    +LG   K  
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A+ V ++M+  +++P   TFNI+++G  K+     +L++F+ +     +P ++TYN LI
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI 338

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC  G++  A  +  ++  +G  PN ITY ++                          
Sbjct: 339 NGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSL-------------------------- 372

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                    I  F K G +KEA D  + +   G +     YN LI+ YCK GK++  + L
Sbjct: 373 ---------INGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +EME++G   D  T+  LI GLC+ GNI+ A+   + +   G   +L  ++ +++    
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCS 482

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            G+   A  + + M          TY+ M+   CK   L +A+ +
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNM 527



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 139/323 (43%), Gaps = 15/323 (4%)

Query: 131 ANRVFQDMICGDLTP--CTATFNIMLNGLCKNRYTDNALRM-FRGLQKHGFVPELVTYNI 187
            N +F+ +I  +L P  C   +      L KNR    +L + F+ L              
Sbjct: 67  PNELFRQLISSELNPDLCLRYYT----WLVKNRDISVSLELTFKLLHSLANAKRYSKIRS 122

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            + G  + G       I   +    +   N+I    ++     N +++LG E        
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           GY         ++ A +K  R  +     ++M+   +Q ++ ++N +IN  CK GK+  A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             ++++M+  G+  +  ++  LIDG CK    G +  A   L+ M +     NL  +N +
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 364 VDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +D   KD  +  ++ VF+ M  +D      TY+S+++ LC   ++  A  +    + +GV
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362

Query: 420 RILKSAQKAVVDGLRHSGCRREA 442
           +       ++++G   +G  +EA
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEA 385



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 162/367 (44%), Gaps = 9/367 (2%)

Query: 88  TRNSLLSCSLDLLDEMLEMGIPPDVWS-YNSLMHCLFQLGKPDEANRVFQDM-ICGDLTP 145
            +N  +S SL+L  ++L        +S   S +    + G   + + +F  + +C ++  
Sbjct: 92  VKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCV 151

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
            +   ++++     N   +     F+    +G+    ++   L+  L K  R     ++ 
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLY 211

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           KE+      PN  T+  ++    +  K     +++  MK  GY+ +   Y T+I  + K+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKL 271

Query: 266 ---GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
              G++ +A   +++MV + V  ++ ++N LI+ + K+  L  +  +  EM  Q    + 
Sbjct: 272 GGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNV 331

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            T+  LI+GLC  G I  A    + M   G   NL  Y+ +++   K+G +  A+++F+S
Sbjct: 332 ITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDS 391

Query: 383 MEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ++ + +      Y+ ++   CK  ++     L     + G+         ++ GL  +G 
Sbjct: 392 VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 439 RREAKKI 445
              AKK+
Sbjct: 452 IEAAKKL 458


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 213/463 (46%), Gaps = 45/463 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   CKANRL++A  +     +   +P    YN +I  Y     FD  Y++L R R  G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P V+ YN ++    +   +  +L + +EM +    P++ +YN L+  L + GK D A  
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFE 398

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M    L P   T NIM++ LCK++  D A  +F  +      P+ +T+  LI GL 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLG 458

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK---------------------------- 225
           K GR+  A  I +++ DS    N+I YT+++K                            
Sbjct: 459 KVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQ 518

Query: 226 -------CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                  C F+  + + G  +   +K + +  D   Y  +I   +K G   E  +    M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G  LD  +YN +I+ +CK GK+  AY LL+EM+ +GFE    T+  +IDGL K   +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A +  E       + N+  Y+ ++D  GK G+ID A  + E +  K    + +T++S+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSL 698

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +  L KA+ +  A    L C +S ++ LK     V  G+  +G
Sbjct: 699 LDALVKAEEINEA----LVCFQS-MKELKCTPNQVTYGILING 736



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 204/436 (46%), Gaps = 39/436 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+A +L+ A  +     + G+ P+V T N+++D  C+    D    I  +M  
Sbjct: 381 NILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDY 440

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              +PD +T+ SLI G  +   +  +  + ++ML+     +   Y SL+   F  G+ ++
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            +++++DM+  + +P     N  ++ + K    +    MF  ++   FVP+  +Y+ILI 
Sbjct: 501 GHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIH 560

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAG                               F N  Y    E+  +MK +G   
Sbjct: 561 GLIKAG-------------------------------FANETY----ELFYSMKEQGCVL 585

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  VI  F K G++ +A   +E+M T G +  +V+Y ++I+   K  +L+ AY+L 
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           +E + +  E +   ++ LIDG  K G I  A L LE + + G   N+  +N ++D L K 
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKA 705

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
            +I+ A+  F+SM+      +  TY  +++ LCK ++   A        K G++    + 
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765

Query: 427 KAVVDGLRHSGCRREA 442
             ++ GL  +G   EA
Sbjct: 766 TTMISGLAKAGNIAEA 781



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 178/408 (43%), Gaps = 43/408 (10%)

Query: 10  LNIC---VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +N C   V +  KAN+L +   ++ +  +    P    Y  LI A+      D   T+  
Sbjct: 133 VNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQ 192

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M+E G  P V  + +LI G  +   +  +L LLDEM    +  D+  YN  +    ++G
Sbjct: 193 QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D A + F ++    L P   T+  M+  LCK    D A+ MF  L+K+  VP    YN
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I G   AG+   A  +L+     G  P+ I Y  I+ C                    
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC-------------------- 352

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                            K+G++ EA    E+M  D    ++ +YN LI++ C+ GKL+ A
Sbjct: 353 ---------------LRKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCA 396

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + L D M+K G   +  T  I++D LCK+  +  A    E M+      +   +  ++D 
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDG 456

Query: 367 LGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKL 410
           LGK G++D A  ++E M   D    S  Y+S++ N     R     K+
Sbjct: 457 LGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 5/406 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           +YN L+    +  +FDA   IL  M  AG  P V T   ++    + + L    D++  M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
            +    P   +Y +L+     +   D    +FQ M      P    F  ++ G  K    
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+AL +   ++      ++V YN+ I    K G++  A     E+  +G  P+ +TYT++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    +  +    +E+   +++       + Y T+I  +   G+  EA   +E+    G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
              +++YN ++    K GK++ A  + +EM+K     +  T+ ILID LC+AG +  A  
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCAFE 398

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
             + M K G   N+   N +VDRL K  K+D A  +FE M+ K    D  T+ S++  L 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLG 458

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           K  R+  A K+    L S  R       +++    + G + +  KI
Sbjct: 459 KVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 121/243 (49%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L TR  NI +  FCK  ++ KA  ++ +    G  P VVTY  +ID   +    D  Y +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
               +   I  +VV Y+SLI G  +   +  +  +L+E+++ G+ P+V+++NSL+  L +
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVK 704

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
             + +EA   FQ M     TP   T+ I++NGLCK R  + A   ++ +QK G  P  ++
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I GL KAG +  A  +      +G  P++  Y  +++      +      +    +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824

Query: 245 RKG 247
           R+G
Sbjct: 825 RRG 827



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 150/361 (41%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            F    R E    I  D +     PD+   N  +D   +    + G  +   ++     P
Sbjct: 491 NFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVP 550

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D  +Y+ LI G  +    + + +L   M E G   D  +YN ++    + GK ++A ++ 
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M      P   T+  +++GL K    D A  +F   +       +V Y+ LI G  K 
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A  IL+EL   G  PN  T+ +++    +  +    L    +MK    T +   Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I    K+ +  +A  + ++M   G++   +SY T+I+   K G +  A  L D  + 
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   D   +  +I+GL        A    E   + G   + +    ++D L K+  ++ 
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQ 850

Query: 376 A 376
           A
Sbjct: 851 A 851



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 144/317 (45%), Gaps = 40/317 (12%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           +L  C  ++N +L  + + R  D   ++   +   GF P + T   ++    KA +LR  
Sbjct: 93  ELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREG 152

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +++ +      P    YTT++          + L +   M+  GY      + T+I  
Sbjct: 153 FDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F K GR+  A   +++M +  +  DIV YN  I+ + K GK++ A+    E+E  G + D
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNK--------------IGFDS------------ 355
           + T+T +I  LCKA  +  A    E++ K              +G+ S            
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332

Query: 356 ---------NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAK 402
                    ++ AYNCI+  L K GK+D A+ VFE M+ KD+     TY+ ++  LC+A 
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAG 391

Query: 403 RLPSASKLLLSCLKSGV 419
           +L  A +L  S  K+G+
Sbjct: 392 KLDCAFELRDSMQKAGL 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  R+++A  I+ + ++ G+ P+V T+N L+DA  +    +        M+E   +P+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTY  LI G  +    + +     EM + G+ P   SY +++  L + G   EA  +F 
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
                   P +A +N M+ GL       +A  +F   ++ G      T  +L+  L K  
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKND 846

Query: 197 RLRTAR---WILKELGDSGHA 214
            L  A     +L+E G + HA
Sbjct: 847 CLEQAAIVGAVLRETGKARHA 867


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 154/287 (53%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+  +     ++ + + + G+ P VV+YN+L++G  R   L     L   M 
Sbjct: 128 FNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMH 187

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K DEAN +F +M+   L P   TF  +++G CKN   D
Sbjct: 188 ASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVD 247

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +     +P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 248 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLI 307

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G +
Sbjct: 308 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXK 367

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 368 PDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 150/308 (48%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    +   +  +  + D + + G+ P V SYN+
Sbjct: 106 FKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNT 165

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM    +LG  DE  R+   M    + P   T+++++NGLCK    D A  +F  +   G
Sbjct: 166 LMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXG 225

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++      P+ ITY T++    +    K   
Sbjct: 226 LVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAH 285

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D   Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  
Sbjct: 286 VLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 345

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++      L+ M + G   ++
Sbjct: 346 CQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 405

Query: 358 EAYNCIVD 365
             YN +++
Sbjct: 406 VTYNVLMN 413



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 1/297 (0%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N +++G  +  
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLG 174

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  P  +T+T
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFT 234

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    +N +  L +EI   M  +    D   Y T+I    K G LK+A   + +M   
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLK 294

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G + D ++Y TLI+  CKEG L+ A+     M ++    D   +T LI GLC+ G    A
Sbjct: 295 GXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 354

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
              L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 355 EKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQ-RDGHVPSVVTYNV 410



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       ++ + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 96  VLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWG 155

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ EA 
Sbjct: 156 LRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEAN 215

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+    V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 216 ELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 275

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK GB+K A + +  M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 276 CKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 335

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G +
Sbjct: 336 VAYTALISGLCQEGRSVDAEKMLREMLSVGXK 367



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 89/174 (51%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   +LPD++TYN LI   C+       + ++  M   G  PD 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDK 300

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 301 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 360

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+     P T T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 361 MLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G  PD +TY  LID  C+    D  +    RM +
Sbjct: 269 NTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQ 328

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G  PD  +Y  +++   + G    
Sbjct: 329 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWT 388

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 389 GSKLLKEMQRDGHVPSVVTYNVLMNG 414


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 8/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N  +  FCK   ++ A +     ++ G+L D  +YN+L+   C   S D      + M 
Sbjct: 274 INTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDME 333

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGK 127
           + G+ PDVVTYN+L  G     L+S +  ++ +ML  G+ PD+ +Y +L+  HC  Q+G 
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC--QMGN 391

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA ++ Q+ +          +N++L+ LCK    + AL +F  ++     P+ + Y+I
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK G ++ A  + +++      P+      ++   F+N              R  
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  +V++  + EA     +M+  G+   +V++NTLIN +C+ G L  A 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L+ +  +G      T+T L++  C+ GN++     L  M           Y  ++  L
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            +  K+  ++ + E M  K    DS TY++++   CK K +  A +L
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 168/380 (44%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+    N+ +   CK  R+E+A  +  +   L + PD + Y++LI   C+       Y 
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +MR     P      +++ G  +N  +S + +  D    M +  DV  YN ++    
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +L    EA +++  MI   +TP   TFN ++NG C+      A +M   ++  G VP +V
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+   C+ G ++     L E+  +   P  +TYT ++K   R  K    L++L  M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D   Y T+I  F K   + +A      M+        V+Y  LIN  C  G L
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           +    ++  +E +     K T+  +I   C  G +  A  +   M   GF  ++  Y+ +
Sbjct: 708 KDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 364 VDRLGKDGKIDHAINVFESM 383
           ++RL K G I  A   F  M
Sbjct: 768 INRLCKRGLITEAKYFFVMM 787



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 184/428 (42%), Gaps = 4/428 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+   +E+A  +  + +  G   +V+ YNML+   C+    +   T+ + M    +
Sbjct: 383 ICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRL 442

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD + Y+ LI G  +   +  +  L ++M      P  ++  +++  LF+ G   EA  
Sbjct: 443 EPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARN 502

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F      DL      +NIM++G  +      A++++  + + G  P +VT+N LI G C
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           + G L  AR +L+ +   G  P+ +TYTT+M         +     L  M+         
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    +  ++ E+   +E M   G+  D V+YNT+I  +CK  ++  A  L + M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
                +  + T+ +LI+ LC  G++K     +  +           Y  I+      G++
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQV 742

Query: 374 DHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A+  F  M  K        YS++++ LCK   +  A    +  L  GV       K V
Sbjct: 743 SKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTV 802

Query: 430 VDGLRHSG 437
           ++     G
Sbjct: 803 LNAFHQQG 810



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 191/442 (43%), Gaps = 74/442 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A  +++A     D  + GV PDVVTYN L   +           ++ +M  
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD+VTY +LI G  +   +  +L L  E L  G   +V  YN L+ CL ++G+ +E
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR------------------- 171
           A  +F +M    L P    ++I+++GLCK  +   A +++                    
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 172 GLQKHGFVPE----------------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL K+G + E                +V YNI+I G  +   +  A  +  ++ + G  P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+ T++                             G+C       + G L EA   +
Sbjct: 550 SVVTFNTLIN----------------------------GFC-------RRGDLMEARKML 574

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E +   G+   +V+Y TL+N YC+ G ++  +  L EME         T+T+LI GLC+ 
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
             +  +   LEYM   G   +   YN I+    K  +I  A+ ++  M + +      TY
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 392 SSMVHNLCKAKRLPSASKLLLS 413
             +++ LC    L    ++++S
Sbjct: 695 KVLINALCIFGDLKDVDRMVVS 716



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 14/416 (3%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + ++ML  AY +         ++ +M++      V TYNSL+       ++    D+ +E
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIM---WDVYNE 227

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKN 160
           +   G P    + + L+H L +  K ++A     D   + G   P   + N +++  CK 
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG---PSIVSINTIMSKFCKV 284

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A   F  + K+G + +  +YNIL+ GLC AG +  A     ++   G  P+ +TY
Sbjct: 285 GLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTY 344

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+ K            +++  M  +G   D   Y T+I    ++G ++EA    ++ ++
Sbjct: 345 NTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLS 404

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G +L+++ YN L++  CK G++E A  L DEME    E D   ++ILI GLCK G ++ 
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQR 464

Query: 341 ARLHLEYMN-KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
           A    E M  K  F  +  A   ++  L K+G I  A N F++      ++D   Y+ M+
Sbjct: 465 AYQLYEQMRLKRKFPHHF-AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMI 523

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
               +   +  A +L    ++ G+         +++G    G   EA+K+   IR+
Sbjct: 524 DGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 4/324 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R+ ++ DVV YN++ID Y +         +  +M E GI+P VVT+N+LI G  R   L 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  +L+ +   G+ P V +Y +LM+   ++G   E      +M    + P   T+ +++
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            GLC+      +L++   +   G +P+ VTYN +I+  CK   +  A  +   +      
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 215 PNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           P  +TY  ++   C F + K    + +  +++ +  T     Y T+I A    G++ +A 
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVV--SIEDRNITLKKVTYMTIIKAHCAKGQVSKAL 746

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            Y  QM+  G  + I  Y+ +IN  CK G +  A      M  +G   D      +++  
Sbjct: 747 GYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806

Query: 333 CKAGNIKGARLHLEYMNKIGFDSN 356
            + GN       L  + K GF S+
Sbjct: 807 HQQGNNSSVFEFLAMVVKSGFISH 830



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 200/444 (45%), Gaps = 56/444 (12%)

Query: 30  IIDGI--RLGVL-PDVVT--YNMLIDAY----CQFVSFDAGYTILNRMREAGISPDVVTY 80
           ++DG+  RL  L PDV    +  LI+ Y      F  F   + +  + R   +  D V  
Sbjct: 84  VVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKEL--DSVIK 141

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW-------SYNSLMH-CLFQLGKPDEAN 132
           N ++     ++ + C L LL++         VW       S + ++H  LF + K  + N
Sbjct: 142 NLIVDQGLGSASIICDL-LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLN 200

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
             FQ            T+N +L+ +   R+TD    ++  ++  G      T +ILI GL
Sbjct: 201 --FQ--------ASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGL 247

Query: 193 CKAGRLRTARWILKELGDSGHA--PNAITYTTIM-KCCFRNRKYKLGL-----EILSAMK 244
           C+  +L  A   +  L DS     P+ ++  TIM K C      K+GL          M 
Sbjct: 248 CEQSKLEDA---ISFLHDSNKVVGPSIVSINTIMSKFC------KVGLIDVARSFFCLMV 298

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           + G   D F Y  ++      G + EA  + + M   GV+ D+V+YNTL   +   G + 
Sbjct: 299 KNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMS 358

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCI 363
            A  ++ +M  QG   D  T+T LI G C+ GNI+ A +L  E +++ GF  N+  YN +
Sbjct: 359 GARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR-GFKLNVIFYNML 417

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K G+I+ A+ +F+ ME      D   YS ++H LCK   +  A +L         
Sbjct: 418 LSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRK 477

Query: 420 RILKSAQKAVVDGLRHSGCRREAK 443
                AQ+AV+ GL  +G   EA+
Sbjct: 478 FPHHFAQRAVLLGLFKNGNISEAR 501



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 8/210 (3%)

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K + +  +G  +  +  A+ +   + +A   + +M     Q  + +YN+L++       +
Sbjct: 162 KFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIM 221

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
              Y   +E++  G    + T +ILI GLC+   ++ A   L   NK+    ++ + N I
Sbjct: 222 WDVY---NEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTI 277

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + +  K G ID A + F  M     + DSF+Y+ ++H LC A  +  A        K GV
Sbjct: 278 MSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGV 337

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                    +  G    G    A+K+  K+
Sbjct: 338 EPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 199/412 (48%), Gaps = 47/412 (11%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y  +I+ +C+    D  + +L+ M+E G+  DV+ +++LI G  R   +  +L+    M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-----ICGDLTPCTATFNIMLNGLCK 159
           E    P+V +YN++++ L +  + DE   +F DM           P   +++ +++ LCK
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +  D A   F+ ++  G  P +VTY+ LI GLCK  R+  A  +L +L      P A+ 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    R  K    LE+L  MK KG+  +   +  ++ A  K    ++A  + E+++
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             G + ++V+YN  ++  CK GK++ AY +L EM +     D  T++ +IDG CKAG + 
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 340 GA------------------------------------RLHLEYMNKIGFDSNLEAYNCI 363
            A                                    R+H + +N  GF   L+ YN +
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA-GFIPGLQTYNVL 359

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           +D +     ++ A+ ++  M+ K    D+ TY+ ++  LC+A+R+  A + L
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFL 411



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 203/428 (47%), Gaps = 17/428 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRL-----GVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N  V   CKANR+++   +  D  +      G  PDV++Y+ +IDA C+    D  Y   
Sbjct: 72  NTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 131

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            RMR  G +P+VVTY+SLI G  +   +  +  LL ++    + P    YN++++   + 
Sbjct: 132 KRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQ 191

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GKP E   +   M           FN ML+ L KN   + A + F  L K G  P +VTY
Sbjct: 192 GKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTY 251

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N+ + GLCKAG++  A  IL E+ +S   P+ ITY++I+    +  +     ++ + M  
Sbjct: 252 NVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 311

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                    + T++  F +  + +EA    E MV  G    + +YN L++  C    +E+
Sbjct: 312 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 371

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +  +M+++  + D  T+  LI  LC+A  +  A+  L+ M       N    + +V+
Sbjct: 372 ALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 431

Query: 366 RLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            L K G++D A +V ++            V  +CKA     A +++   +  GVR  ++ 
Sbjct: 432 VLCKQGEVDEACSVLDN------------VVEICKAGEPDEAVEVIEQMVLKGVRPDEAT 479

Query: 426 QKAVVDGL 433
             AV+  L
Sbjct: 480 YVAVLRSL 487



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 202/461 (43%), Gaps = 55/461 (11%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CKA R++KA         +G  P+VVTY+ LID  C+    D  Y++L +++   + P
Sbjct: 117 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVP 176

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             + YN+++ G  R    S  L+LL  M E G   ++  +N+++H L++  + ++A + F
Sbjct: 177 RAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFF 236

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + ++     P   T+N+ ++GLCK    D A R+   + +    P+++TY+ +I G CKA
Sbjct: 237 ERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKA 296

Query: 196 GRL-----------------------------------RTARWILKELGDSGHAPNAITY 220
           GR+                                   R A  + +++ ++G  P   TY
Sbjct: 297 GRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTY 356

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             +M C       +  LEI   MKRK    D   Y  +I    +  R+ EA ++++ M  
Sbjct: 357 NVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEA 416

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           D V  +    + L+ + CK+G+++ A  +LD + +                +CKAG    
Sbjct: 417 DNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDE 460

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSMVH 396
           A   +E M   G   +   Y  ++  L    ++D AI  FE M  +       TY+ ++ 
Sbjct: 461 AVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIG 520

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             C A     A ++  + + +G        + +   LR +G
Sbjct: 521 EACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 169/381 (44%), Gaps = 9/381 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-----AGISPDVVTYNSLIAGATRNSLLS 94
           P+V+TYN +++  C+    D G  + + M +      G  PDV++Y+++I    +   + 
Sbjct: 66  PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVD 125

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + +    M  +G  P+V +Y+SL+  L ++ + DEA  +   +   D+ P    +N ++
Sbjct: 126 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVV 185

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG  +       L +   +++ GF   ++ +N ++  L K      A    + L  SG  
Sbjct: 186 NGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKK 245

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN +TY   +    +  K      IL  M     T D   Y ++I  F K GR+ +A D 
Sbjct: 246 PNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDV 305

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M+        V++ TL++ + +  K   A+ + ++M   GF     T+ +L+D +C 
Sbjct: 306 FTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCG 365

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
           A +++ A      M +     +   Y  ++  L +  ++D A    + ME  +     ++
Sbjct: 366 ADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 425

Query: 395 VHN----LCKAKRLPSASKLL 411
            H     LCK   +  A  +L
Sbjct: 426 CHALVEVLCKQGEVDEACSVL 446



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 151/297 (50%), Gaps = 10/297 (3%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +  ++NG CK    D A  +   +++ G   +++ ++ LI+GLC+ GR+  A    K +G
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-----GYTFDGFGYCTVIAAFVK 264
           +   +PN ITY T++    +  +   GLE+   M+++     G   D   Y TVI A  K
Sbjct: 62  EEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
             R+ +A +Y ++M   G   ++V+Y++LI+  CK  +++ AY LL +++ +        
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE--- 381
           +  +++G  + G        L +M + GF  N+  +N ++  L K+ + + A   FE   
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 382 -SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            S +  +  TY+  VH LCKA ++  A ++LL  ++S V        +++DG   +G
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 138/329 (41%), Gaps = 22/329 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ V   CKA ++++A  I+++ +   V PDV+TY+ +ID +C+    D    +  RM  
Sbjct: 252 NVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 311

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P  VT+ +L+ G + +     +  + ++M+  G  P + +YN LM C+      + 
Sbjct: 312 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 371

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++  M      P   T+  ++  LC+ R  D A      ++    VP     + L++
Sbjct: 372 ALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVE 431

Query: 191 GLCKAGRLRTARWILK---ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
            LCK G +  A  +L    E+  +G    A+                   E++  M  KG
Sbjct: 432 VLCKQGEVDEACSVLDNVVEICKAGEPDEAV-------------------EVIEQMVLKG 472

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  V+ +   + R+  A    E+M + G    +V+Y  LI   C     + A+
Sbjct: 473 VRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAF 532

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            + + M   GF     T   L   L  AG
Sbjct: 533 RIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 10/280 (3%)

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I G CKAG++  A  +L E+ + G   + + ++T+++   R  +    LE   +M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-----VTDGVQLDIVSYNTLINLYCK 299
            +  + +   Y TV+    K  R+ E  +  + M      + G + D++SY+T+I+  CK
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
             +++ AY     M   G   +  T++ LIDGLCK   +  A   L  +           
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +V+   + GK    + +   M+ K    +   +++M+H L K      A +     L
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           KSG +         V GL  +G   EA +I  ++  +K++
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVT 280



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 49/116 (42%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   CKA   ++A  +I   +  GV PD  TY  ++ + C     D+      +M   G 
Sbjct: 449 VVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGC 508

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +P +VTY  LI  A    +   +  + + M+  G  P   +  +L  CL   G  D
Sbjct: 509 APGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 204/425 (48%), Gaps = 7/425 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK       E ++ D  RLG +PD+  YN+ ++  C     D    ++  M E G  PD
Sbjct: 89  LCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPD 148

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTY  +I G  R      ++++   M+  G  PD  +  +L+  L   GK D A  +  
Sbjct: 149 IVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTV 208

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
             + G +    + +N ++NG C+  + D A  +   ++++G  P+LVTYN+L+   C   
Sbjct: 209 GAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDEL 268

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            L  A  ++K++  SG  P+  +Y  ++K  C  NR  K  + +++ M+ KG   D   Y
Sbjct: 269 LLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC-DVVSY 327

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            T+I A       K A    E+M   G+  D+V++  LI  + +EG    A  LLD+M  
Sbjct: 328 NTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTG 387

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   D+  +T ++D LCK G +  A      M + G   ++ +YN +++ L +  ++  
Sbjct: 388 LGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSE 447

Query: 376 AINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A++++E M       D  T+  ++  L   K+L  A ++    ++ G  +  +  + +V+
Sbjct: 448 AMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVN 507

Query: 432 GLRHS 436
            + HS
Sbjct: 508 AI-HS 511



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 181/396 (45%), Gaps = 4/396 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           + +R + AE      I  G   +  TY+  I   C+  +F     +L  M   G  PD+ 
Sbjct: 56  RQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIW 115

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            YN  +      + L  +L ++  M+E G  PD+ +Y  +++ L + G+ D A  ++++M
Sbjct: 116 AYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNM 175

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +    +P       ++ GLC +   D A  +  G  +         YN LI G C+AG +
Sbjct: 176 VRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWI 235

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A+ I+  +  +G  P+ +TY  ++  C      +    ++  M+R G   D + Y  +
Sbjct: 236 DKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNEL 295

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +    K  RL +A   M   +      D+VSYNT+I   C     + AY L +EM  +G 
Sbjct: 296 LKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGI 355

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             D  T TILI    + G+   A+  L+ M  +G   +   Y  IVD L K GK+  A +
Sbjct: 356 TPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHS 415

Query: 379 VF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
           VF    ES    D  +Y+++++ LC+A R+  A  L
Sbjct: 416 VFCDMVESGITPDVVSYNALINGLCRASRVSEAMHL 451



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 181/385 (47%), Gaps = 1/385 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C  N+L+ A  ++   +  G  PD+VTY ++I+  C+   FD+   I   M  
Sbjct: 118 NIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVR 177

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPD     +L+ G   +  +  + +L    +   I      YNSL++   Q G  D+
Sbjct: 178 KGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDK 237

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +   M      P   T+N++LN  C     + A  + + +++ G  P++ +YN L+K
Sbjct: 238 AQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLK 297

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCKA RL  A  ++    ++    + ++Y TI+K        K   ++   M  KG T 
Sbjct: 298 GLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITP 357

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   +  +I AF++ G    A   ++QM   G+  D V Y T+++  CK GK+  A+ + 
Sbjct: 358 DVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVF 417

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M + G   D  ++  LI+GLC+A  +  A    E M+  G   +   +  I+  L  +
Sbjct: 418 CDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWE 477

Query: 371 GKIDHAINVFESMEVKDSFTYSSMV 395
            K+  A  V++ M ++  FT    V
Sbjct: 478 KKLSVACRVWDQM-MEKGFTLDGAV 501



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 141/292 (48%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S  + N  +  FC+A  ++KA++II    R G  PD+VTYN+L++  C  +  +    
Sbjct: 216 KFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAEN 275

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++ +M  +G+ PDV +YN L+ G  + + L  +  ++   +E     DV SYN+++  L 
Sbjct: 276 LMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALC 335

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
                  A ++F++M    +TP   TF I++    +   ++ A ++   +   G +P+ V
Sbjct: 336 TASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRV 395

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y  ++  LCK G++  A  +  ++ +SG  P+ ++Y  ++    R  +    + +   M
Sbjct: 396 LYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDM 455

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              G   D   +  +I   +   +L  A    +QM+  G  LD     TL+N
Sbjct: 456 HTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVN 507



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/431 (22%), Positives = 181/431 (41%), Gaps = 41/431 (9%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + Y   I +Y +    D      + M ++      + YN  I    R S    +    D 
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M+  G   + ++Y+  +  L ++       ++ +DM      P    +NI LN LC    
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D AL + + + + G  P++VTY I+I GLC+AGR  +A  I + +   G +P+      
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD--------- 273
           ++     + K  L  E+     R    F    Y ++I  F + G + +A           
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249

Query: 274 --------------------------YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
                                      M++M   GV+ D+ SYN L+   CK  +L+ AY
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAY 309

Query: 308 LLL-DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +++ ++ME +G  CD  ++  +I  LC A + K A    E M   G   ++  +  ++  
Sbjct: 310 MMMVNKMEAKGL-CDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKA 368

Query: 367 LGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             ++G  + A  + + M     + D   Y+++V +LCK  ++  A  +    ++SG+   
Sbjct: 369 FLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPD 428

Query: 423 KSAQKAVVDGL 433
             +  A+++GL
Sbjct: 429 VVSYNALINGL 439



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 109/214 (50%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKANRL+KA  ++++ +    L DVV+YN +I A C        Y +   M   GI+PD
Sbjct: 299 LCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPD 358

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVT+  LI    R    + +  LLD+M  +G+ PD   Y +++  L + GK   A+ VF 
Sbjct: 359 VVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFC 418

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   +TP   ++N ++NGLC+      A+ ++  +   G  P+ VT+ ++I GL    
Sbjct: 419 DMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEK 478

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           +L  A  +  ++ + G   +     T++     N
Sbjct: 479 KLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSN 512


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 186/378 (49%), Gaps = 7/378 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRM---REAGISPDVVTYNSLIAGATRNSLLSCS 96
           P V ++N +++   Q    D      N +   ++  I P+V+++N +I    +  L+  +
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           ++L  EM      PD ++Y +LM  L ++ + DEA  +  +M      P  ATFN+++NG
Sbjct: 201 IELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLING 260

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK        ++   +   G VP  VTYN LI GLC  G+L  A  +L  +  S   PN
Sbjct: 261 LCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPN 320

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY TI+    +  +   G  +L  M+ +GY  + + Y  +++   K G+ +EA    +
Sbjct: 321 EVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFK 380

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           + +  G +L+ V Y+ L++  C++ K + A  +L EM  +G   + +T + L+ G  + G
Sbjct: 381 ESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVG 440

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
           N   A    + M KI    N   Y+ ++  L KDGK+  A+ V+  M       D   YS
Sbjct: 441 NSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYS 500

Query: 393 SMVHNLCKAKRLPSASKL 410
           SM+  LC A  +  A KL
Sbjct: 501 SMIQGLCDAGSVEEALKL 518



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 179/376 (47%), Gaps = 2/376 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N+ + + CK   ++ A  +  +      +PD  TY  L+D  C+    D   ++L+ M+
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQ 243

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  P   T+N LI G  +    +    L+D M   G  P+  +YN+L+H L   GK D
Sbjct: 244 IEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 303

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +   M+     P   T+  ++NGL K     +  R+   +++ G++     Y++L+
Sbjct: 304 KALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLV 363

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GL K G+   A  + KE  D G   N + Y+ ++    R+RK    ++ILS M  KG  
Sbjct: 364 SGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCA 423

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            + F + +++  F ++G   +A +  + M       + V Y+ LI+  CK+GK+  A ++
Sbjct: 424 PNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMV 483

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE--AYNCIVDRL 367
             +M   G   D   ++ +I GLC AG+++ A      M  +  DS  +   YN + + L
Sbjct: 484 WAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNAL 543

Query: 368 GKDGKIDHAINVFESM 383
            K   I  A+++  SM
Sbjct: 544 CKQSSISRAVDLLNSM 559



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 27/415 (6%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK +R+++A +++ +    G  P   T+N+LI+  C+   F     +++ M   G  P+
Sbjct: 226 LCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPN 285

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN+LI G      L  +L LLD M+     P+  +Y ++++ L + G+  +  RV  
Sbjct: 286 EVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV 345

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M           ++++++GL K   ++ A+R+F+     G     V Y+ L+ GLC+  
Sbjct: 346 LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDR 405

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +   A  IL E+ D G APNA T++++MK  F        +E+   M +     +   Y 
Sbjct: 406 KPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYS 465

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-- 314
            +I    K G++ EA     +M+  G + D+V+Y+++I   C  G +E A  L +EM   
Sbjct: 466 VLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCL 525

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC------------ 362
           +   + D  T+ IL + LCK  +I  A   L  M   G D +L   N             
Sbjct: 526 EPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPP 585

Query: 363 ---------IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
                    +V RL K  +   A  + E M  K     + T++ +VH LC+ K++
Sbjct: 586 QDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKI 640



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 2/217 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ V    K  + E+A  +  + +  G   + V Y+ L+D  C+    D    IL+ M +
Sbjct: 360 SVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTD 419

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+  T++SL+ G         ++++  +M ++    +   Y+ L+H L + GK  E
Sbjct: 420 KGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVME 479

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ--KHGFVPELVTYNIL 188
           A  V+  M+     P    ++ M+ GLC     + AL+++  +   +    P+++TYNIL
Sbjct: 480 AMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNIL 539

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
              LCK   +  A  +L  + D G  P+ +T    ++
Sbjct: 540 FNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR 576



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 2/191 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+T L +  V   C+  + ++A  I+ +    G  P+  T++ L+  + +  +      
Sbjct: 388 KLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIE 447

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +   M +   + + V Y+ LI G  ++  +  ++ +  +ML  G  PDV +Y+S++  L 
Sbjct: 448 VWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLC 507

Query: 124 QLGKPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             G  +EA +++ +M+C   D  P   T+NI+ N LCK      A+ +   +   G  P+
Sbjct: 508 DAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPD 567

Query: 182 LVTYNILIKGL 192
           LVT NI ++ L
Sbjct: 568 LVTCNIFLRML 578


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 8/407 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N  +  FCK   ++ A +     ++ G+L D  +YN+L+   C   S D      + M 
Sbjct: 274 INTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDME 333

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGK 127
           + G+ PDVVTYN+L  G     L+S +  ++ +ML  G+ PD+ +Y +L+  HC  Q+G 
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHC--QMGN 391

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +EA ++ Q+ +          +N++L+ LCK    + AL +F  ++     P+ + Y+I
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK G ++ A  + +++      P+      ++   F+N              R  
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D   Y  +I  +V++  + EA     +M+  G+   +V++NTLIN +C+ G L  A 
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            +L+ +  +G      T+T L++  C+ GN++     L  M           Y  ++  L
Sbjct: 572 KMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGL 631

Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            +  K+  ++ + E M  K    DS TY++++   CK K +  A +L
Sbjct: 632 CRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 168/380 (44%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL+    N+ +   CK  R+E+A  +  +   L + PD + Y++LI   C+       Y 
Sbjct: 408 KLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQ 467

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  +MR     P      +++ G  +N  +S + +  D    M +  DV  YN ++    
Sbjct: 468 LYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYV 527

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +L    EA +++  MI   +TP   TFN ++NG C+      A +M   ++  G VP +V
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  L+   C+ G ++     L E+  +   P  +TYT ++K   R  K    L++L  M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             KG   D   Y T+I  F K   + +A      M+        V+Y  LIN  C  G L
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           +    ++  +E +     K T+  +I   C  G +  A  +   M   GF  ++  Y+ +
Sbjct: 708 KDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 364 VDRLGKDGKIDHAINVFESM 383
           ++RL K G I  A   F  M
Sbjct: 768 INRLCKRGLITEAKYFFVMM 787



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 184/428 (42%), Gaps = 4/428 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +C  C+   +E+A  +  + +  G   +V+ YNML+   C+    +   T+ + M    +
Sbjct: 383 ICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRL 442

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD + Y+ LI G  +   +  +  L ++M      P  ++  +++  LF+ G   EA  
Sbjct: 443 EPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARN 502

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F      DL      +NIM++G  +      A++++  + + G  P +VT+N LI G C
Sbjct: 503 YFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFC 562

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           + G L  AR +L+ +   G  P+ +TYTT+M         +     L  M+         
Sbjct: 563 RRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHV 622

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            Y  +I    +  ++ E+   +E M   G+  D V+YNT+I  +CK  ++  A  L + M
Sbjct: 623 TYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM 682

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
                +  + T+ +LI+ LC  G++K     +  +           Y  I+      G++
Sbjct: 683 LLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQV 742

Query: 374 DHAINVFESMEVKDSFT----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A+  F  M  K        YS++++ LCK   +  A    +  L  GV       K V
Sbjct: 743 SKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTV 802

Query: 430 VDGLRHSG 437
           ++     G
Sbjct: 803 LNAFHQQG 810



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 196/459 (42%), Gaps = 74/459 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A  +++A     D  + GV PDVVTYN L   +           ++ +M  
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD+VTY +LI G  +   +  +L L  E L  G   +V  YN L+ CL ++G+ +E
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR------------------- 171
           A  +F +M    L P    ++I+++GLCK  +   A +++                    
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 172 GLQKHGFVPE----------------LVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GL K+G + E                +V YNI+I G  +   +  A  +  ++ + G  P
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+ T++                             G+C       + G L EA   +
Sbjct: 550 SVVTFNTLIN----------------------------GFC-------RRGDLMEARKML 574

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E +   G+   +V+Y TL+N YC+ G ++  +  L EME         T+T+LI GLC+ 
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
             +  +   LEYM   G   +   YN I+    K  +I  A+ ++  M + +      TY
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
             +++ LC    L    ++++S     + + K     ++
Sbjct: 695 KVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTII 733



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 192/416 (46%), Gaps = 14/416 (3%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           + ++ML  AY +         ++ +M++      V TYNSL+       ++    D+ +E
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIM---WDVYNE 227

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKN 160
           +   G P    + + L+H L +  K ++A     D   + G   P   + N +++  CK 
Sbjct: 228 IKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVG---PSIVSINTIMSKFCKV 284

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A   F  + K+G + +  +YNIL+ GLC AG +  A     ++   G  P+ +TY
Sbjct: 285 GLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTY 344

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+ K            +++  M  +G   D   Y T+I    ++G ++EA    ++ ++
Sbjct: 345 NTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLS 404

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G +L+++ YN L++  CK G++E A  L DEME    E D   ++ILI GLCK G ++ 
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQR 464

Query: 341 ARLHLEYMN-KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
           A    E M  K  F  +  A   ++  L K+G I  A N F++      ++D   Y+ M+
Sbjct: 465 AYQLYEQMRLKRKFPHHF-AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMI 523

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
               +   +  A +L    ++ G+         +++G    G   EA+K+   IR+
Sbjct: 524 DGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 4/324 (1%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R+ ++ DVV YN++ID Y +         +  +M E GI+P VVT+N+LI G  R   L 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  +L+ +   G+ P V +Y +LM+   ++G   E      +M    + P   T+ +++
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
            GLC+      +L++   +   G +P+ VTYN +I+  CK   +  A  +   +      
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 215 PNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
           P  +TY  ++   C F + K    + +  +++ +  T     Y T+I A    G++ +A 
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVV--SIEDRNITLKKXTYMTIIKAHCAKGQVSKAL 746

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            Y  QM+  G  + I  Y+ +IN  CK G +  A      M  +G   D      +++  
Sbjct: 747 GYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAF 806

Query: 333 CKAGNIKGARLHLEYMNKIGFDSN 356
            + GN       L  + K GF S+
Sbjct: 807 HQQGNNSSVFEFLAMVVKSGFISH 830



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 196/438 (44%), Gaps = 44/438 (10%)

Query: 30  IIDGI--RLGVL-PDVVT--YNMLIDAY----CQFVSFDAGYTILNRMREAGISPDVVTY 80
           ++DG+  RL  L PDV    +  LI+ Y      F  F   + +  + R   +  D V  
Sbjct: 84  VVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKEL--DSVIK 141

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW-------SYNSLMH-CLFQLGKPDEAN 132
           N ++     ++ + C L LL++         VW       S + ++H  LF + K  + N
Sbjct: 142 NLIVDQGLGSASIICDL-LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLN 200

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
             FQ            T+N +L+ +   R+TD    ++  ++  G      T +ILI GL
Sbjct: 201 --FQ--------ASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQSECTTSILIHGL 247

Query: 193 CKAGRLRTARWILKELGDSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           C+  +L  A   +  L DS     P+ ++  TIM    +     +       M + G   
Sbjct: 248 CEQSKLEDA---ISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLH 304

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F Y  ++      G + EA  + + M   GV+ D+V+YNTL   +   G +  A  ++
Sbjct: 305 DSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVV 364

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +M  QG   D  T+T LI G C+ GNI+ A +L  E +++ GF  N+  YN ++  L K
Sbjct: 365 QKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSR-GFKLNVIFYNMLLSCLCK 423

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+I+ A+ +F+ ME      D   YS ++H LCK   +  A +L              A
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483

Query: 426 QKAVVDGLRHSGCRREAK 443
           Q+AV+ GL  +G   EA+
Sbjct: 484 QRAVLLGLFKNGNISEAR 501



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 8/210 (3%)

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K + +  +G  +  +  A+ +   + +A   + +M     Q  + +YN+L++       +
Sbjct: 162 KFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIM 221

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
              Y   +E++  G    + T +ILI GLC+   ++ A   L   NK+    ++ + N I
Sbjct: 222 WDVY---NEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTI 277

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           + +  K G ID A + F  M     + DSF+Y+ ++H LC A  +  A        K GV
Sbjct: 278 MSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGV 337

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
                    +  G    G    A+K+  K+
Sbjct: 338 EPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 215/485 (44%), Gaps = 82/485 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C A R  +A  ++ +   LG+    VT+ +++ A C+    D   +  +    
Sbjct: 8   NIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFH---- 63

Query: 71  AGISP----DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
             +SP    DVV+Y +LI G   +  +  + +L +EM   G    V +Y ++++ LF+  
Sbjct: 64  -SVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAH 121

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +PD+A   F+ M+     P   TF +++ GLCK    + A  +F+ + + G+ P+++ Y 
Sbjct: 122 RPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYT 181

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT------------------------ 222
            L+ GL KA  +  AR +L+E+   G  P  +TYT+                        
Sbjct: 182 SLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM 241

Query: 223 ----IMKCCFR----NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
               ++ C F       K +  L +   M +KG T D   Y  +I     + R  EA + 
Sbjct: 242 CAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEM 301

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE--CDKY--------- 323
            E MV  G   D  +Y  +++ +CK+GK++AA  +++ M+  G E  C  Y         
Sbjct: 302 FEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLG 361

Query: 324 ------------------------THTILIDGLCKAGNIKGARLHLEYM-NKIGFDSNLE 358
                                   T+ IL+ GLCK G    ARL L  M  + G    + 
Sbjct: 362 VNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIV 421

Query: 359 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
           +Y  ++  LGK G+ D AI+VF  M     V D  + +S++  L  A R+  A++LL   
Sbjct: 422 SYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDM 481

Query: 415 LKSGV 419
            + G+
Sbjct: 482 PRMGI 486



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 177/396 (44%), Gaps = 16/396 (4%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R   + +   CKA +L +A  +  +  R G  PD++ Y  L+D   +    D    +L  
Sbjct: 143 RTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQE 202

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ--- 124
           +   G+ P  VTY S I+G  +N  +  +  L+ EM +M           ++HC+F    
Sbjct: 203 IVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM-------CAAEVLHCIFGGYV 255

Query: 125 -LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             GK +EA  +  +M+   +T     +  +++GL   R  D A  MF  + + G VP+  
Sbjct: 256 LEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTR 315

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +++   CK G+++ A  +++ +  +G   N   Y ++M       + +  + + S M
Sbjct: 316 TYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTM 375

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGK 302
            RK        Y  ++    K+G+  +A   + +M   DG+   IVSY TLI+   K G+
Sbjct: 376 LRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGR 435

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            + A  +  EM   G   D  + T LI  L  A  +  A   L  M ++G   +  AYN 
Sbjct: 436 ADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNA 495

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
           +V  L    K+  A +V   M     V D  T+ +M
Sbjct: 496 LVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAM 531



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 178/427 (41%), Gaps = 58/427 (13%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV +YN++I   C    F   Y +L  M   GI    VT+  ++          C    +
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKAL-------CERKEV 55

Query: 101 DEMLEM--GIPP----DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
           D+ L     + P    DV SY +L+  L   G+ D A  +F++M     + C   +  ++
Sbjct: 56  DQALSYFHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAII 114

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N L K    D A+  F  +      P+L T+ ++I GLCKAG+L  A             
Sbjct: 115 NALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRA------------- 161

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                                  E+   M RKG+  D   Y +++    K   + EA   
Sbjct: 162 ----------------------CEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKL 199

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++++V+ G++   V+Y + I+  CK G++E A  L+ EM K    C       +  G   
Sbjct: 200 LQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM---CAAEVLHCIFGGYVL 256

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
            G I+ A    + M K G   ++  Y  ++  L    + D A  +FE+M     V D+ T
Sbjct: 257 EGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRT 316

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI- 449
           Y  +V + CK  ++ +A K++     +G+        +++DG       REA  + S + 
Sbjct: 317 YGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTML 376

Query: 450 -RMAKIS 455
            +M K S
Sbjct: 377 RKMVKPS 383



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 2/224 (0%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR   + V  FCK  +++ A  ++      G+  +   YN L+D +           + +
Sbjct: 314 TRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYS 373

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM-GIPPDVWSYNSLMHCLFQL 125
            M    + P +VTYN L+ G  +    + +  +L EM E  GI P + SY +L+H L + 
Sbjct: 374 TMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKA 433

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ DEA  VF +M+   + P   +   ++  L      D A ++ R + + G  P+ + Y
Sbjct: 434 GRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAY 493

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           N L+K LC   ++  A  +L E+ D+   P+  T+   MK  F+
Sbjct: 494 NALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRA-MKLGFK 536



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 8/128 (6%)

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
           LD+ SYN +I   C  G+   AY LL EME  G +  + TH I++  LC+   +  A   
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQA--- 58

Query: 345 LEYMNKIGFDSNLE--AYNCIVDRLGKDGKIDHAINVFESMEVKDS---FTYSSMVHNLC 399
           L Y + +   S+L+  +Y  ++  L   G+ID A  +FE M    S     Y+++++ L 
Sbjct: 59  LSYFHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALF 118

Query: 400 KAKRLPSA 407
           KA R   A
Sbjct: 119 KAHRPDQA 126


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 225/484 (46%), Gaps = 40/484 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  N  + +  KAN  EK    +   +  G  PDV ++  +I+A C+    +    + 
Sbjct: 208 SLKTCNFLLSSLVKANEFEKC-CEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELF 266

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M + GISP+VVTYN +I G  +N  L  + +L ++M   G+ P++ +Y +L++ L +L
Sbjct: 267 MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKL 326

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
              D+ N V  +MI     P    FN +++G CK    + AL++   +      P  VT 
Sbjct: 327 NFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTL 386

Query: 186 NILIKGLCKAGRLRTARWILKELGDSG---HAPN----------------AITYT----- 221
             L++G CK+ ++  A   L+E+  SG   H  N                A  +T     
Sbjct: 387 YSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS 446

Query: 222 ----------TIMKCCF-RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
                     T++ C   ++ K+    E+   +  KG          +I      G+L E
Sbjct: 447 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPE 506

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A+  +++M+  G+ +D ++YN LI  +C EGK+E  + L +EM K+G + D YT+  L+ 
Sbjct: 507 ASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLR 566

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLC  G +  A    +     G  SN+  Y  +++   K  +I+   N+F  +  K    
Sbjct: 567 GLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL 626

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           +S  Y+ ++   C+   + +A +LL +    G+    +   +++ G+ + G   +AK + 
Sbjct: 627 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI 686

Query: 447 SKIR 450
            ++R
Sbjct: 687 DEMR 690



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 176/361 (48%), Gaps = 4/361 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  +   ML+   C+         +  R+ E G     VT N+LI G      L  +  +
Sbjct: 451 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI 510

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + EMLE G+P D  +YN+L+      GK +   R+ ++M    + P   T+N +L GLC 
Sbjct: 511 VKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN 570

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D+A++++   +  G +  + TY I+++G CKA R+     +  EL       N+I 
Sbjct: 571 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 630

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  I+K   +N      L++L  MK KG   +   Y ++I     IG +++A   +++M 
Sbjct: 631 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 690

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G   ++V Y  LI  YCK G+++ A     EM       +K+T+T++IDG CK GN++
Sbjct: 691 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 750

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A   L  M + G   ++  YN + +   K   +D+A  V + M  +    D  TY+++V
Sbjct: 751 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810

Query: 396 H 396
           H
Sbjct: 811 H 811



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 206/442 (46%), Gaps = 43/442 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N  +K   ++ + I  G  P+VV +N LID YC+  + +    I + M    I+P  V
Sbjct: 325 KLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 384

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           T  SL+ G  ++  +  + + L+E+L  G  I PD  +  S++H L +  +   A R  +
Sbjct: 385 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD--NCYSVVHWLCKKFRYHSAFRFTK 442

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  +  P      +++ GLCK+     A  ++  L + G     VT N LI GLC AG
Sbjct: 443 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 502

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIM---------KCCFRNR---------------- 231
           +L  A  I+KE+ + G   + ITY  ++         + CFR R                
Sbjct: 503 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 562

Query: 232 ----------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                     K    +++    K  G   +   Y  ++  + K  R+++  +   ++++ 
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            ++L+ + YN +I  +C+ G + AA  LL+ M+ +G   +  T++ LI G+C  G ++ A
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 682

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 397
           +  ++ M K GF  N+  Y  ++    K G++D A + +  M       + FTY+ M+  
Sbjct: 683 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 742

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
            CK   +  A+ LL+   +SG+
Sbjct: 743 YCKLGNMEKANNLLIKMKESGI 764



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 156/321 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C A +L +A  I+ + +  G+  D +TYN LI  +C     +  + +   M +
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD+ TYN L+ G      L  ++ L DE    G+  ++ +Y  +M    +  + ++
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F +++   +   +  +NI++   C+N     AL++   ++  G +P   TY+ LI 
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 671

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G+C  G +  A+ ++ E+   G  PN + YT ++    +  +          M       
Sbjct: 672 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 731

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y  +I  + K+G +++A + + +M   G+  D+V+YN L N +CK   ++ A+ + 
Sbjct: 732 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 791

Query: 311 DEMEKQGFECDKYTHTILIDG 331
           D+M  +G   D+ T+T L+ G
Sbjct: 792 DQMATEGLPVDEITYTTLVHG 812



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 188/420 (44%), Gaps = 4/420 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK++++E AE  + + +  G+         ++   C+   + + +     M      P 
Sbjct: 393 FCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPS 452

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +    L+ G  ++     + +L   +LE G P    + N+L+H L   GK  EA+R+ +
Sbjct: 453 DLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVK 512

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L     T+N ++ G C     +   R+   + K G  P++ TYN L++GLC  G
Sbjct: 513 EMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVG 572

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +  E   SG   N  TY  +M+   +  + +    + + +  K    +   Y 
Sbjct: 573 KLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYN 632

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A  + G +  A   +E M + G+  +  +Y++LI+  C  G +E A  L+DEM K+
Sbjct: 633 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 692

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF  +   +T LI G CK G +  A      M       N   Y  ++D   K G ++ A
Sbjct: 693 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 752

Query: 377 INVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            N+     ES  V D  TY+ + +  CKA  + +A K+       G+ + +     +V G
Sbjct: 753 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/396 (23%), Positives = 178/396 (44%), Gaps = 35/396 (8%)

Query: 45  YNMLIDAYC-QF--VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           +++LI  Y  QF  + F     +   +   G  P + T N L++   + +      ++  
Sbjct: 174 FDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFR 233

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M E G  PDV+S+ ++++ L + GK + A  +F  M    ++P   T+N ++NGLC+N 
Sbjct: 234 VMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             DNA  +   +   G  P L TY  LI GL K         +L E+  SG  PN + + 
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFN 352

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +    +  L+I   M  K  T       +++  F K  +++ A + +E++++ 
Sbjct: 353 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 412

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+ +   +  ++++  CK+ +  +A+     M  + F       T+L+ GLCK G     
Sbjct: 413 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK---- 468

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
             HLE           E +  ++++     K+                T ++++H LC A
Sbjct: 469 --HLEAT---------ELWFRLLEKGSPASKV----------------TSNALIHGLCGA 501

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +LP AS+++   L+ G+ + +    A++ G  + G
Sbjct: 502 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 202/452 (44%), Gaps = 26/452 (5%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C      +L + + I+   I  G  P    +N L+ AYC+   F   Y +L +M + 
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDL------LDEMLEMGIPPDVWSYNSLMHCLFQL 125
              P  V YN LI        L   +         +EML  G   +  +  S   CL   
Sbjct: 408 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK ++A +V  +M+     P T+T++ ++  LC     +NA  +F+ ++  G VP++ TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI    KAG ++ A   L E+   G  P  +TYTT++    + +K  +  E+   M  
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD----------------GVQLDIVS 289
           KG   +   Y  +I  + K G +++A     +M  D                  + ++V+
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y  L++  CK  K++ A  LL+ M   G E +   +  LIDG CKA  +  A+     M 
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
           + G++ N+  Y+ ++DRL KD ++D  + V   M       +   Y+ M+  L K  +  
Sbjct: 708 EHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            A KL+L   + G +       A++DG   +G
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 27/464 (5%)

Query: 13  CVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           C+C F    + EKA  +I + +  G +PD  TY+ +I   C     +  + +   M+  G
Sbjct: 463 CLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + PDV TY  LI   ++  ++  + + LDEM+  G  P V +Y +L+H   +  K   AN
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL---------- 182
            +F+ MI     P   T+  +++G CK+   + A +++  ++    +P++          
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 183 ------VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
                 VTY  L+ GLCKA +++ AR +L+ +   G  PN I Y  ++    +  K    
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            E+   M   GY  + + Y ++I    K  RL      + +M+ +    +IV Y  +I+ 
Sbjct: 700 QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K  K + AY L+  ME++G + +  T+T +IDG  KAG +         M   G   N
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-----KRLPSASKLL 411
              Y  +++     G +D A  + E  E+K ++ +   V + CK      +    +  LL
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLE--EMKQTY-WPKHVSSYCKVIEGYKREFILSLGLL 876

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
               K+G   +    K ++D    +G    A ++  ++  A +S
Sbjct: 877 EEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 206/482 (42%), Gaps = 71/482 (14%)

Query: 2   FGKLSTRL-LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG   TR+  N  V  F +A++L+ A+ +  +   LG+  D  T      A C+   +  
Sbjct: 235 FGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWRE 294

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM- 119
             +++ +       P+ + YN +I+G    S    ++D L+ M      P+V +Y  L+ 
Sbjct: 295 ALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLC 351

Query: 120 HCLF--QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
            CL   QLG+     R+   MI     P    FN +++  CK+     A ++ + ++K  
Sbjct: 352 GCLNKKQLGR---CKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408

Query: 178 FVPELVTYNILIKGLCKAGRL--------------------------------------- 198
             P  V YNILI  +C  G L                                       
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468

Query: 199 --RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  ++ E+  +G  P+  TY+ ++       + +    +   MK  G   D + Y 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F K G +K+A +++++MV DG +  +V+Y TLI+ Y K  K+  A  L + M  +
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA----------------RLHLEYMNKIGFDSNLEAY 360
           G   +  T+T LIDG CK+GNI+ A                 ++ +  N +    N+  Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 361 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             +VD L K  K+  A ++ E+M V     ++  Y +++   CKA +L  A ++    ++
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 417 SG 418
            G
Sbjct: 709 HG 710



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 12/323 (3%)

Query: 18  CKANRLEKA----EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           CKA++++ A    E + +DG      P+ + Y+ LID +C+    D    + ++M E G 
Sbjct: 656 CKAHKVKDARDLLETMFVDGCE----PNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           +P+V TY+SLI    ++  L   L +L +MLE    P++  Y  ++  L ++ K DEA +
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M      P   T+  M++G  K    D  L +FR +   G  P  VTY +LI   C
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G L  A  +L+E+  +    +  +Y  +++     R++ L L +L  +++ G      
Sbjct: 832 ATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG--YKREFILSLGLLEEVEKNGSAPIIL 889

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS--YNTLINLYCKEGKLEAAYLLLD 311
            Y  +I  FVK GRL+ A +  +++++  + +      Y +LI  +    K+  A+ L  
Sbjct: 890 LYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFY 949

Query: 312 EMEKQGFECDKYTHTILIDGLCK 334
           +M + G   D  T   L+ GL +
Sbjct: 950 DMIRDGVIPDLGTFVHLLMGLIR 972



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 188/420 (44%), Gaps = 23/420 (5%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+LI   C+   ++     L R+++ G  P  +TYN+L+    R   L  +  +  EM E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           +G+  D ++       L ++GK  EA  + +     D  P T  +N M++GLC+  + + 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEE 326

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+     ++    +P + TY IL+ G     +L   + IL  +   G  P+   + +++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 226 CCFRNRKYKLGLEILSAMK----RKGYTFDGFGYCTVIAAFVKIGRLKEATDY------M 275
              ++  +    ++L  M+    + GY      Y  +I +    G L     +       
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVV----YNILIGSICSGGELPGPVTFELAEKAY 442

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M++ G  L+ V+  +     C  GK E AY ++ EM   GF  D  T++ +I  LC A
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FT 390
             ++ A    + M   G   ++  Y  ++D   K G I  A N  + M V+D       T
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM-VRDGCEPTVVT 561

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y++++H   KAK++  A++L    +  G         A++DG   SG   +A +I +++R
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 67/376 (17%)

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATF-NIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           +F+ G  D     F   I GD         N+++   C+N   + AL     L+  G+ P
Sbjct: 180 VFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKP 239

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             +TYN L++   +A +L TA+ + +E+ + G + +  T     +   +  K++   E L
Sbjct: 240 TRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWR---EAL 296

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ----------------------- 277
           S ++++ +  +   Y  +I+   +    +EA D++ +                       
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356

Query: 278 ------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
                       M+ +G       +N+L++ YCK      AY LL +MEK   +     +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR---------------LGKD 370
            ILI  +C  G + G          + F+   +AYN ++                 L   
Sbjct: 417 NILIGSICSGGELPGP---------VTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK + A  V   M     V D+ TYS ++  LC A R+ +A  L      +GV       
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 427 KAVVDGLRHSGCRREA 442
             ++D    +G  ++A
Sbjct: 528 TILIDCFSKAGIIKQA 543



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 39/190 (20%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F KA +++K   +  +    G  P+ VTY +LI+  C     D  Y +L  M++      
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP-------------------------- 110
           V +Y  +I G  R  +LS  L LL+E+ + G  P                          
Sbjct: 855 VSSYCKVIEGYKREFILS--LGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHK 912

Query: 111 DVWS-----------YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           +V S           Y SL++      K   A  +F DMI   + P   TF  +L GL +
Sbjct: 913 EVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIR 972

Query: 160 NRYTDNALRM 169
            R  + AL++
Sbjct: 973 VRRWEEALQL 982


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 225/484 (46%), Gaps = 40/484 (8%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +  N  + +  KAN  EK    +   +  G  PDV ++  +I+A C+    +    + 
Sbjct: 185 SLKTCNFXLSSLVKANEFEKC-CEVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELF 243

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M + GISP+VVTYN +I G  +N  L  + +L ++M   G+ P++ +Y +L++ L +L
Sbjct: 244 MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKL 303

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
              D+ N +  +MI     P    FN +++G CK    + AL++   +      P  VT 
Sbjct: 304 NFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTL 363

Query: 186 NILIKGLCKAGRLRTARWILKELGDSG---HAPN----------------AITYT----- 221
             L++G CK+ ++  A   L+E+  SG   H  N                A  +T     
Sbjct: 364 YSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS 423

Query: 222 ----------TIMKCCF-RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
                     T++ C   ++ K+    E+   +  KG          +I      G+L E
Sbjct: 424 RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPE 483

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A+  +++M+  G+ +D ++YN LI  +C EGK+E  + L +EM K+G + D YT+  L+ 
Sbjct: 484 ASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLR 543

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLC  G +  A    +     G  SN+  Y  +++   K  +I+   N+F  +  K    
Sbjct: 544 GLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMEL 603

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQ 446
           +S  Y+ ++   C+   + +A +LL +    G+    +   +++ G+ + G   +AK + 
Sbjct: 604 NSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLI 663

Query: 447 SKIR 450
            ++R
Sbjct: 664 DEMR 667



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 176/361 (48%), Gaps = 4/361 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P  +   ML+   C+         +  R+ E G     VT N+LI G      L  +  +
Sbjct: 428 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRI 487

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           + EMLE G+P D  +YN+L+      GK +   R+ ++M    + P   T+N +L GLC 
Sbjct: 488 VKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCN 547

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
               D+A++++   +  G +  + TY I+++G CKA R+     +  EL       N+I 
Sbjct: 548 VGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIV 607

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  I+K   +N      L++L  MK KG   +   Y ++I     IG +++A   +++M 
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 667

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G   ++V Y  LI  YCK G+++ A     EM       +K+T+T++IDG CK GN++
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 727

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A   L  M + G   ++  YN + +   K   +D+A  V + M  +    D  TY+++V
Sbjct: 728 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787

Query: 396 H 396
           H
Sbjct: 788 H 788



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 206/442 (46%), Gaps = 43/442 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K N  +K   I+ + I  G  P+VV +N LID YC+  + +    I + M    I+P  V
Sbjct: 302 KLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 361

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMG--IPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           T  SL+ G  ++  +  + + L+E+L  G  I PD  +  S++H L +  +   A R  +
Sbjct: 362 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD--NCYSVVHWLCKKFRYHSAFRFTK 419

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+  +  P      +++ GLCK+     A  ++  L + G     VT N LI GLC AG
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 479

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIM---------KCCFRNR---------------- 231
           +L  A  I+KE+ + G   + ITY  ++         + CFR R                
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 539

Query: 232 ----------KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                     K    +++    K  G   +   Y  ++  + K  R+++  +   ++++ 
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            ++L+ + YN +I  +C+ G + AA  LL+ M+ +G   +  T++ LI G+C  G ++ A
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 397
           +  ++ M K GF  N+  Y  ++    K G++D A + +  M       + FTY+ M+  
Sbjct: 660 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 719

Query: 398 LCKAKRLPSASKLLLSCLKSGV 419
            CK   +  A+ LL+   +SG+
Sbjct: 720 YCKLGNMEKANNLLIKMKESGI 741



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 156/321 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C A +L +A  I+ + +  G+  D +TYN LI  +C     +  + +   M +
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI PD+ TYN L+ G      L  ++ L DE    G+  ++ +Y  +M    +  + ++
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 588

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +F +++   +   +  +NI++   C+N     AL++   ++  G +P   TY+ LI 
Sbjct: 589 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 648

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G+C  G +  A+ ++ E+   G  PN + YT ++    +  +          M       
Sbjct: 649 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y  +I  + K+G +++A + + +M   G+  D+V+YN L N +CK   ++ A+ + 
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 768

Query: 311 DEMEKQGFECDKYTHTILIDG 331
           D+M  +G   D+ T+T L+ G
Sbjct: 769 DQMATEGLPVDEITYTTLVHG 789



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 188/420 (44%), Gaps = 4/420 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK++++E AE  + + +  G+         ++   C+   + + +     M      P 
Sbjct: 370 FCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPS 429

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +    L+ G  ++     + +L   +LE G P    + N+L+H L   GK  EA+R+ +
Sbjct: 430 DLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVK 489

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L     T+N ++ G C     +   R+   + K G  P++ TYN L++GLC  G
Sbjct: 490 EMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVG 549

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +L  A  +  E   SG   N  TY  +M+   +  + +    + + +  K    +   Y 
Sbjct: 550 KLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYN 609

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I A  + G +  A   +E M + G+  +  +Y++LI+  C  G +E A  L+DEM K+
Sbjct: 610 IIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 669

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF  +   +T LI G CK G +  A      M       N   Y  ++D   K G ++ A
Sbjct: 670 GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKA 729

Query: 377 INVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
            N+     ES  V D  TY+ + +  CKA  + +A K+       G+ + +     +V G
Sbjct: 730 NNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 177/396 (44%), Gaps = 35/396 (8%)

Query: 45  YNMLIDAY-CQF--VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           +++LI  Y  QF  + F     +   +   G  P + T N  ++   + +      ++  
Sbjct: 151 FDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFR 210

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M E G  PDV+S+ ++++ L + GK + A  +F  M    ++P   T+N ++NGLC+N 
Sbjct: 211 VMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 269

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             DNA  +   +   G  P L TY  LI GL K         IL E+  +G  PN + + 
Sbjct: 270 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFN 329

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    +    +  L+I   M  K  T       +++  F K  +++ A + +E++++ 
Sbjct: 330 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 389

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+ +   +  ++++  CK+ +  +A+     M  + F       T+L+ GLCK G     
Sbjct: 390 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK---- 445

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
             HLE           E +  ++++     K+                T ++++H LC A
Sbjct: 446 --HLEAT---------ELWFRLLEKGSPASKV----------------TSNALIHGLCGA 478

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +LP AS+++   L+ G+ + +    A++ G  + G
Sbjct: 479 GKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 208/427 (48%), Gaps = 16/427 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVL----PDVVTYNMLIDAYCQFVSFDAGYTILN 66
           N+ +   CK  ++++A    +D  R   L    PDV TY+ L++  C+    D    +L+
Sbjct: 178 NLIIKALCKLGQIDRA----VDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 233

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G  P+ VT+N LI   ++N  LS +  L+D M   G  P+  +YN+L+H L   G
Sbjct: 234 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 293

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  + + M+     P   T+  ++NGL K R  ++ + +   +++ G       Y+
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 353

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL K G+   A  + KE+ + G  PN + Y   +    R+ K     +IL  M  K
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+  + F Y +++  F K G  ++A    ++M++  ++ ++V  + L+N  C+ G+L  A
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 473

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYM-NKIGFDSNLEAYNCIV 364
             +   M  +G + D   ++ +I GLC  G++ KG +L  E    +     ++  YN + 
Sbjct: 474 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 533

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L +   +  AI++  SM  +    DS T +  +  L +    P   +L L  L   VR
Sbjct: 534 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV--VR 591

Query: 421 ILKSAQK 427
           +LK  +K
Sbjct: 592 LLKRERK 598



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 6/388 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+++TYN++I A C+    D        M     +PDV TY++L+ G  +   +  +
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LLDEM   G  P+  ++N L+  L + G    A ++  +M      P   T+N +++G
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     D AL +   +     VP  VTY  +I GL K  R      IL  + + G   N
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y++++   F+  K +  + +   M  KG   +   Y   I    +  +  EA D ++
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M++ G   +  +Y++L+  + K+G  + A L+  EM  Q    +    ++L++GLC++G
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK------DSFT 390
            ++ A     +M   G   ++ AY+ ++  L   G +D  + +F  M+ +      D  T
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           Y+ + + LC+   L  A  LL S L  G
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEG 556



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 12/339 (3%)

Query: 128 PDEANRVFQDMICGDLTPCTAT---FNIMLNGLCKNRYTDNALRMFR---GLQKHGFVPE 181
           P EA   F  M   DL  C  T   FN +LN + +      A + +    G    GF P 
Sbjct: 116 PGEAVNFFHRM-ANDLH-CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPN 173

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYN++IK LCK G++  A    +E+      P+  TY+T+M    + R+    + +L 
Sbjct: 174 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 233

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M+ +G   +   +  +I A  K G L  A   ++ M   G   + V+YNTLI+  C +G
Sbjct: 234 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 293

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           KL+ A  LL++M       ++ T+  +I+GL K    +     L  M + G  +N   Y+
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 353

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L K+GK ++A+ +++ M  K    +   Y + +  LC+ ++   A  +L   L  
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           G         +++ G    G  ++A  +  ++    + H
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH 452



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 21/196 (10%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N+  C+      C++ RL +A  +    +  G+ PDVV Y+ +I   C   S D G  + 
Sbjct: 453 NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 512

Query: 66  NRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             M+  E    PDVVTYN L     R   L+ ++DLL+ ML+ G  PD  + N  +  L 
Sbjct: 513 YEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLR 572

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +   P +  R+F D               ++  L K     +ALR+   +      PE  
Sbjct: 573 ERINPPQDGRLFLDE--------------LVVRLLKRERKLSALRIVEEMLLRFLPPEPS 618

Query: 184 TYNILIKGLCKAGRLR 199
           T++ +I+  CK  R+R
Sbjct: 619 TWSRVIQRTCKPKRIR 634


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 214/488 (43%), Gaps = 57/488 (11%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  L N+ + +  + +R      +  D +   V P   T+N+LI + C+  +FD    + 
Sbjct: 114 SLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLF 173

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL------------------------- 100
            +M + G  P+  T   L+ G  R  L+  +L+L+                         
Sbjct: 174 EKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREE 233

Query: 101 ---------DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCT 147
                    + M E+G+ PDV ++NS +  L + GK  EA+R+F+DM      G   P  
Sbjct: 234 MNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNV 293

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            TFN+ML G CK+    +A  +   ++K G    L  YNI + GL + G L  AR +L E
Sbjct: 294 VTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDE 353

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +   G  PNA TY  +M    RN        ++  M R G   D   Y T++  +   G+
Sbjct: 354 MVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGK 413

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + EA   + +M+ +G Q +  + NTL++   KEG+   A  +L +M ++ ++ D  T  I
Sbjct: 414 VFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNI 473

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--V 385
           +++GLC+ G +  A   +  M   G  S           L K       IN   ++   +
Sbjct: 474 VVNGLCRNGELDKASEIVSEMWTNGPTS-----------LDKGNSFASLINSIHNVSNCL 522

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY+++++ LCK  RL  A K  +  L   +R          D    S C++   KI
Sbjct: 523 PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLR----PDSVTYDTFIWSFCKQ--GKI 576

Query: 446 QSKIRMAK 453
            S  R+ K
Sbjct: 577 SSAFRVLK 584



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 214/466 (45%), Gaps = 29/466 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +    +   L +A  ++ + +  G+ P+  TYN+++D  C+         +++ M  
Sbjct: 332 NIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMR 391

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PD V Y++L+ G      +  +  +L EM+  G  P+ ++ N+L+H L++ G+  E
Sbjct: 392 NGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLE 451

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------ 178
           A  + Q M      P T T NI++NGLC+N   D A  +   +  +G             
Sbjct: 452 AEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASL 511

Query: 179 ----------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
                     +P+ +TY  LI GLCK GRL  A+    E+      P+++TY T +    
Sbjct: 512 INSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFC 571

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +  K      +L  M+R G +     Y  +I       ++ E     ++M   G+  DI 
Sbjct: 572 KQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDIC 631

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEY 347
           +YN +I   C+ GK + A  LL EM  +G   +  +  ILI    K+ + K A  L    
Sbjct: 632 TYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVA 691

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE-SME---VKDSFTYSSMVHNLCKAKR 403
           +N  G    L  Y+ + + L   G++  A  +FE S++      +F Y  ++  LC+ +R
Sbjct: 692 LNICGRKEAL--YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDER 749

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           L  A+ LL   +  G     ++   V+DGL   G +R+A ++  ++
Sbjct: 750 LADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 170/354 (48%), Gaps = 17/354 (4%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + P +  YN L+    +  +P   + ++ DM+   + P T TFN++++ LC++R  D+AL
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHAL 170

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
           ++F  + + G  P   T  IL++GLC+AG ++ A  ++    +S    N + Y T++   
Sbjct: 171 QLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNN-NNSCRIANRVVYNTLVSRF 229

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG----V 283
            R         ++  M   G   D   + + I+A  + G++ EA+     M  D      
Sbjct: 230 CREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLP 289

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG----FECDKYTHTILIDGLCKAGNIK 339
           + ++V++N ++  +CK G +  A  L++ M+K G     EC    + I + GL + G + 
Sbjct: 290 RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLEC----YNIWLMGLLRNGELL 345

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
            ARL L+ M   G + N   YN ++D L ++  +  A  + + M       D+  YS+++
Sbjct: 346 EARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLL 405

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           H  C   ++  A  +L   +++G +        ++  L   G   EA+++  K+
Sbjct: 406 HGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKM 459



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 3/264 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  RLE+A+   I+ +   + PD VTY+  I ++C+     + + +L  M   G S  
Sbjct: 535 LCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKT 594

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           + TYN+LI G   N+ +     L DEM E GI PD+ +YN+++ CL + GK  +A  +  
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLH 654

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKA 195
           +M+   ++P  ++F I++    K+     A  +F   L   G    L  Y+++   L   
Sbjct: 655 EMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL--YSLMFNELLAG 712

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A+ + +   D         Y  ++    ++ +      +L  +  KGY FD   +
Sbjct: 713 GQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASF 772

Query: 256 CTVIAAFVKIGRLKEATDYMEQMV 279
             VI    K G  ++A +  ++M+
Sbjct: 773 MPVIDGLSKRGNKRQADELAKRMM 796


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 202/452 (44%), Gaps = 26/452 (5%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +C      +L + + I+   I  G  P    +N L+ AYC+   F   Y +L +M + 
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDL------LDEMLEMGIPPDVWSYNSLMHCLFQL 125
              P  V YN LI        L   +         +EML  G   +  +  S   CL   
Sbjct: 408 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK ++A +V  +M+     P T+T++ ++  LC     +NA  +F+ ++  G VP++ TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            ILI    KAG ++ A   L E+   G  P  +TYTT++    + +K  +  E+   M  
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD----------------GVQLDIVS 289
           KG   +   Y  +I  + K G +++A     +M  D                  + ++V+
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVT 647

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y  L++  CK  K++ A  LL+ M   G E +   +  LIDG CKA  +  A+     M 
Sbjct: 648 YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMV 707

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
           + G++ N+  Y+ ++DRL KD ++D  + V   M       +   Y+ M+  L K  +  
Sbjct: 708 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            A KL+L   + G +       A++DG   +G
Sbjct: 768 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 189/405 (46%), Gaps = 22/405 (5%)

Query: 13  CVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           C+C F    + EKA  +I + +  G +PD  TY+ +I   C     +  + +   M+  G
Sbjct: 463 CLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           + PDV TY  LI   ++  ++  + + LDEM+  G  P V +Y +L+H   +  K   AN
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL---------- 182
            +F+ MI     P   T+  +++G CK+   + A +++  ++    +P++          
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 183 ------VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
                 VTY  L+ GLCKA +++ AR +L+ +   G  PN I Y  ++    +  K    
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
            E+   M  +GY  + + Y ++I    K  RL      + +M+ +    +IV Y  +I+ 
Sbjct: 700 QEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K  K + AY L+  ME++G + +  T+T +IDG  KAG +         M   G   N
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
              Y  +++     G +D A  + E  E+K ++ +   V + CK 
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLE--EMKQTY-WPKHVSSYCKV 861



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 206/482 (42%), Gaps = 71/482 (14%)

Query: 2   FGKLSTRL-LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG   TR+  N  V  F +A++L+ A+ +  +   LG+  D  T      A C+   +  
Sbjct: 235 FGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWRE 294

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM- 119
             +++ +       P+ + YN +I+G    S    ++D L+ M      P+V +Y  L+ 
Sbjct: 295 ALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLC 351

Query: 120 HCLF--QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
            CL   QLG+     R+   MI     P    FN +++  CK+     A ++ + ++K  
Sbjct: 352 GCLNKKQLGR---CKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCE 408

Query: 178 FVPELVTYNILIKGLCKAGRL--------------------------------------- 198
             P  V YNILI  +C  G L                                       
Sbjct: 409 CKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFG 468

Query: 199 --RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
               A  ++ E+  +G  P+  TY+ ++       + +    +   MK  G   D + Y 
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYT 528

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  F K G +K+A +++++MV DG +  +V+Y TLI+ Y K  K+  A  L + M  +
Sbjct: 529 ILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAK 588

Query: 317 GFECDKYTHTILIDGLCKAGNIKGA----------------RLHLEYMNKIGFDSNLEAY 360
           G   +  T+T LIDG CK+GNI+ A                 ++ +  N +    N+  Y
Sbjct: 589 GCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTY 648

Query: 361 NCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             +VD L K  K+  A ++ E+M V     ++  Y +++   CKA +L  A ++    ++
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 417 SG 418
            G
Sbjct: 709 RG 710



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 207/502 (41%), Gaps = 92/502 (18%)

Query: 18   CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
            C A+R+E A  +  +    GV+PDV TY +LID + +       +  L+ M   G  P V
Sbjct: 500  CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 78   VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            VTY +LI    +   +S + +L + M+  G  P+V +Y +L+    + G  ++A +++  
Sbjct: 560  VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 138  MICGDL-----------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            M  GD                   P   T+  +++GLCK     +A  +   +   G  P
Sbjct: 620  MR-GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 678

Query: 181  ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
              + Y+ LI G CKA +L  A+ +  ++ + G+ PN  TY++++   F++++  L L++L
Sbjct: 679  NTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 738

Query: 241  SAM-----------------------------------KRKGYTFDGFGYCTVIAAFVKI 265
            S M                                   + KG   +   Y  +I  F K 
Sbjct: 739  SKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 798

Query: 266  GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM------------ 313
            G++ +  +   +M + G   + V+Y  LIN  C  G L+ AY LL+EM            
Sbjct: 799  GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSY 858

Query: 314  ---------------------EKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMN-K 350
                                 EK G       + +LID   KAG ++ A  LH E ++  
Sbjct: 859  CKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISAS 918

Query: 351  IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPS 406
            +   +    Y  ++       KIDHA  +F  M     + D  T+  ++  L + +R   
Sbjct: 919  MSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEE 978

Query: 407  ASKLLLSCLKSGVRILKSAQKA 428
            A +L  S  +  +  L+   K 
Sbjct: 979  ALQLSDSLCQMDINWLRREDKP 1000



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 188/420 (44%), Gaps = 23/420 (5%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N+LI   C+   ++     L R+++ G  P  +TYN+L+    R   L  +  +  EM E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           +G+  D ++       L ++GK  EA  + +     D  P T  +N M++GLC+  + + 
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEE 326

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+     ++    +P + TY IL+ G     +L   + IL  +   G  P+   + +++ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 226 CCFRNRKYKLGLEILSAMK----RKGYTFDGFGYCTVIAAFVKIGRLKEATDY------M 275
              ++  +    ++L  M+    + GY      Y  +I +    G L     +       
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVV----YNILIGSICSGGELPGPVTFELAEKAY 442

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M++ G  L+ V+  +     C  GK E AY ++ EM   GF  D  T++ +I  LC A
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FT 390
             ++ A    + M   G   ++  Y  ++D   K G I  A N  + M V+D       T
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM-VRDGCEPTVVT 561

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y++++H   KAK++  A++L    +  G         A++DG   SG   +A +I +++R
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 147/376 (39%), Gaps = 67/376 (17%)

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATF-NIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           +F+ G  D     F   I GD         N+++   C+N   + AL     L+  G+ P
Sbjct: 180 VFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKP 239

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             +TYN L++   +A +L TA+ + +E+ + G + +  T     +   +  K++   E L
Sbjct: 240 TRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWR---EAL 296

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ----------------------- 277
           S ++++ +  +   Y  +I+   +    +EA D++ +                       
Sbjct: 297 SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNK 356

Query: 278 ------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
                       M+ +G       +N+L++ YCK      AY LL +MEK   +     +
Sbjct: 357 KQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVY 416

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR---------------LGKD 370
            ILI  +C  G + G          + F+   +AYN ++                 L   
Sbjct: 417 NILIGSICSGGELPGP---------VTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK + A  V   M     V D+ TYS ++  LC A R+ +A  L      +GV       
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 427 KAVVDGLRHSGCRREA 442
             ++D    +G  ++A
Sbjct: 528 TILIDCFSKAGIIKQA 543



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 11/190 (5%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F KA +++K   +  +    G  P+ VTY +LI+  C     D  Y +L  M++      
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V +Y  +I G  R  +LS  L LL+E+ + G  P +  Y  L+    + G+ + A  + +
Sbjct: 855 VSSYCKVIEGYKREFILS--LGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHK 912

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYT---DNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           ++I   ++  TA  N+  + +    Y    D+A  +F  + + G +P+L T+  L+ GL 
Sbjct: 913 EVISASMS-MTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGL- 970

Query: 194 KAGRLRTARW 203
               +R  RW
Sbjct: 971 ----IRVRRW 976


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 4/397 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            + +   L KA  +    ++ G+ P+VVTY++LI+  C+         +  ++ + G+ P
Sbjct: 354 AYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
            V+TY+SLI G  ++  L     L   ML  G  PDV   + L++ L + G  DEA R F
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
              +   LT     FN +++G  + + T + L+M+  +  +  +P++VTY +L+KGL + 
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GRL  A  +  +L   G +P+ I Y T++    + R    GL+I   M+  G   D   Y
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I  F + G ++   + + +++  G++ DIV+YNT+I  YC       A  L + ++ 
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
              + +  T TILID  CK G +  A L    M + G + N+  Y+C++D   K    + 
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713

Query: 376 AINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 408
           A  ++E M       +  +YS ++  LCK   +  AS
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEAS 750



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 5/405 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C  N++  A       +R G  P++VT++ LI+ YC+ +  D  +++ N M E GI PD+
Sbjct: 251 CMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y+ LI G  R   L     L    L  G+  DV  ++S+M    ++G   +A  V+  
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   ++P   T++I++NGLC+N     A  +F  + K G  P ++TY+ LI G CK+  
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           LR    +   +   GH P+ +  + ++    R       L       ++G T + + +  
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    ++ R ++       M    V  D+V+Y  L+    ++G+L+ A  L  ++ K+G
Sbjct: 491 LIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG 550

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F  D   +  LIDG CK  +        + M   G   ++  YN +++   ++G +++ +
Sbjct: 551 FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVL 610

Query: 378 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +   +       D  TY++M+   C  K    A K L   LK G
Sbjct: 611 ELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK-LFEVLKCG 654



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 165/354 (46%), Gaps = 6/354 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            Y+ L+  YC+    D        M + G+S      + ++     +  +   L+  +EM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
            + G+    + +NS +    + G+ ++     + ++   L P     N +L GLC     
Sbjct: 202 CK-GLGVYEFVFNSFL----KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             A   F  + + G  P LVT++ LI   CK  RL  A  +   + + G  P+ + Y+ +
Sbjct: 257 GVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSIL 316

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +   FR  K + G  + S    +G   D   + +++ A+V++G L +A +   +M+ +G+
Sbjct: 317 INGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGI 376

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             ++V+Y+ LIN  C+ G++  A  +  ++ KQG E    T++ LIDG CK+ N++    
Sbjct: 377 SPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFG 436

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHN 397
               M + G   ++   + +++ L + G +D A+  F    VK   T ++ + N
Sbjct: 437 LYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQ-AVKRGLTLNNYLFN 489



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 113/226 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +  F +   +E    ++ + I+ G+ PD+VTYN +I  YC    F     +   +
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +     P+ +T+  LI    ++  +  ++ +   MLE G  P++ +Y+ L+   F+    
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  +++ M+   ++P   +++I+++GLCK    + A   F+       +P+++ Y IL
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGIL 771

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           I+G CK GRL  A  +   +  +G  P+ +    + +  F++ + K
Sbjct: 772 IRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAK 817



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 167/379 (44%), Gaps = 7/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            Y  + +++ +    + G      + E G+ P +V  N ++ G    + +  + D  D M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +  G  P++ ++++L++   +  + DEA  ++  MI   + P    ++I++NGL +    
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           +    +F      G   ++V ++ ++    + G L  A  +   +   G +PN +TY+ +
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    RN +      +   + ++G       Y ++I  F K   L++       M+  G 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GAR 342
             D+V  + LIN   ++G ++ A     +  K+G   + Y    LIDG  +    + G +
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +++  M       ++  Y  +V  L + G++D A+ +F  +  K    D   Y +++   
Sbjct: 507 MYI-LMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 399 CKAKRLPSASKLLLSCLKS 417
           CK KR P+    +   ++S
Sbjct: 566 CK-KRDPATGLQIFKLMQS 583



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 154/361 (42%), Gaps = 39/361 (10%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDL---------------TPCTA 148
           +G+   V S+  + H L +    D A RVF  M+   G+L                P T 
Sbjct: 83  LGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPST- 141

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR----LRTARWI 204
            ++ +L+  C+N   D A+  F  + K G        + ++  L  + R    L     +
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            K LG          Y  +     +  + + GL    A+  +G          ++     
Sbjct: 202 CKGLG---------VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCM 252

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
             ++  A+D+ + MV  G   ++V+++TLIN+YCKE +L+ A+ L + M ++G   D   
Sbjct: 253 GNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ++ILI+GL +AG ++            G   ++  ++ I+D   + G +  AI V+  M 
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            +    +  TYS +++ LC+  R+  A  +    LK G+        +++DG     C+ 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF----CKS 428

Query: 441 E 441
           E
Sbjct: 429 E 429


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 215/434 (49%), Gaps = 29/434 (6%)

Query: 2   FGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ 54
           FGKL+    +  + TF       C  +R+ +A    +D       P+VVT+  L++  C+
Sbjct: 38  FGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA----LDLFHQMCKPNVVTFTTLMNGLCR 93

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVW 113
                    +L+RM E G+ P+ +TY +++ G  +      +L+LL +M E+  I PDV 
Sbjct: 94  EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVV 153

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            Y++++  L++ G+  +A  +F +M    + P   T++ M+NG C +     A R+ + +
Sbjct: 154 IYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
                 P++VT++ LI  L K G L +A+ +L+E+  SG  PN +T  T++     + K 
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKL 273

Query: 234 KLGLEILSAMKRK------GYTFDGF-----GYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           K  LE+  AM++        + F+G       Y  +I+  +  G+  EA +  E+M   G
Sbjct: 274 KDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGA 341
           +  D V+Y+++IN  CK+ +L+ A  + D M  + F  +  T   LI G CKAG +  G 
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGL 393

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHN 397
            L  E M + G  +N   Y  ++    K G I+ ++++F+ M       D+ T  +M+  
Sbjct: 394 ELFCE-MGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 398 LCKAKRLPSASKLL 411
           L   + L  A  +L
Sbjct: 453 LWSKEELKRALAML 466



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 201/413 (48%), Gaps = 20/413 (4%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D+ ++N+LI  +C         +   ++ + G  P +VT+N+L+ G      +S +LDL 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M +    P+V ++ +LM+ L + G+  EA  +   M+   L P   T+  +++G+CK 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 161 RYTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             T +AL + R +++   + P++V Y+ +I GL K GR   A+ +  E+ D G  P+ +T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++     + K+     +L  M  +  + D   +  +I A VK G L  A D +++M+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTIL 328
           + GV  ++V+ NTL++  C  GKL+ A  +   M+K            G E D  T+ IL
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I GL   G    A    E M   G   +   Y+ +++ L K  ++D A  +F+SM  K  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             +  T+++++   CKA  +    +L     + G+         ++ G R  G
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 158/357 (44%), Gaps = 55/357 (15%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           IP D++S+N L+ C     K   A   F  +      P   TFN +L+GLC       AL
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT----- 222
            +F  + K    P +VT+  L+ GLC+ GR+  A  +L  + + G  PN ITY T     
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 223 -------------------------------IMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
                                          I+   +++ ++     +   M+ KG   D
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I  F   G+  EA   +++M+   +  D+V+++ LIN   KEG L +A  LL 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-----------GFDSNLEAY 360
           EM   G   +  T   L+DGLC +G +K A    + M K            G + +++ Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           N ++  L  +GK   A  ++E M     V D+ TYSSM++ LCK  RL  A+++  S
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 151/310 (48%), Gaps = 48/310 (15%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC + +  +A+ ++ + +   + PDVVT++ LI+A  +    ++   +L  M  +G+ P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEM-----------GIPPDVWSYNSLMHCLFQL 125
           VVT N+L+ G   +  L  +L++   M +            G+ PDV +YN L+  L   
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK  EA  ++++M    + P T T++ M+NGLCK    D A +MF  +    F P +VT+
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N LI G CKAG +     +  E+G  G   NAITY T+++                    
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR-------------------- 416

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY-NTLINLYCKEGKLE 304
                           F K+G +  + D  ++M++ GV  D ++  N L  L+ KE +L+
Sbjct: 417 ---------------GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKE-ELK 460

Query: 305 AAYLLLDEME 314
            A  +L+E++
Sbjct: 461 RALAMLEELQ 470



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 79/164 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +       +  +AE +  +    G++PD VTY+ +I+  C+    D    + + M  
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
              SP++VT+N+LI G  +  ++   L+L  EM   GI  +  +Y +L+    ++G  + 
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           +  +FQ+MI   + P T T   ML GL        AL M   LQ
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 4/144 (2%)

Query: 315 KQGFE--CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           K G +  CD Y+  ILI   C    +  A      + K+GF   L  +N ++  L  + +
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  A+++F  M   +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG
Sbjct: 66  VSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 433 LRHSGCRREAKKIQSKIRMAKISH 456
           +   G    A  +  K  M ++SH
Sbjct: 126 MCKMGDTVSALNLLRK--MEELSH 147


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 190/410 (46%), Gaps = 4/410 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTY +LIDA C+  + D    +L  M E  ISP+VVT++S+I G  +  LL  + + 
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M E GI P+V +Y +L+   F+    D A  V+ DM+C  +       + ++NGL +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N   + A+ +F+     G   + V Y  LI GL KAG + TA    +EL D    P+A+ 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y   + C     K+K     L+ M+  G   D   Y T+I +  + G   +A   + +M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              ++ ++++YNTL+      G +E A  LL+EM   GF     TH  ++    ++  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
                 E+M   G  +++  YN ++  L   G    A  V E M       D+ T+++++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              CK+  L +A       L   +    +    ++ GL   G   EA  +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 203/429 (47%), Gaps = 7/429 (1%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLI 84
           A A++ +  + GV  D VT N L+   C+    DA   + +R    GI   DV+ +N+LI
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLI 176

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
           AG  R      +L + D M   G+P DV  YN+L+    + G+ D A  V   M    + 
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P  AT+   +   C+ +  + A  ++ G+ ++G + ++VT + L+ GLC+ GR   A  +
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            +E+   G APN +TY T++    +  + K  L +L  M  +G   D   Y  ++    K
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G+  E  D +   ++D +  + V+Y  LI+  CK   ++ A  +L EME++    +  T
Sbjct: 357 QGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM- 383
            + +I+G  K G +  A  +   M + G + N+  Y  ++D   K    D A+ V+  M 
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 384 --EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
              VK + F   S+V+ L +  ++  A  L      SG+ +       ++DGL  +G   
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMP 536

Query: 441 EAKKIQSKI 449
            A K   ++
Sbjct: 537 TAFKFGQEL 545



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 195/435 (44%), Gaps = 39/435 (8%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGY-------------------TILNRMRE------- 70
           G+ P+VVTY  LID + +F   DA                     +++N +R+       
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 71  ---------AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
                    +G+S D V Y +LI G  +   +  +     E+++  + PD   YN  ++C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L  LGK  EA     +M    L P  +T+N M+   C+   T  AL++   ++     P 
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYN L+ GL   G +  A+++L E+  +G +P+++T+  +++ C ++R+  + L+I  
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D   Y T++      G  ++AT  +E+M+  G+  D +++N LI  +CK  
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A+    +M  Q    +  T   L+ GL   G I  A   L  M K G + N   Y+
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +    GK      A+ ++  M     V    TY++++ +  KA  +  A +L     K 
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863

Query: 418 GVRILKSAQKAVVDG 432
           GV         +V G
Sbjct: 864 GVHPTSCTYDILVSG 878



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 203/450 (45%), Gaps = 6/450 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FC+A +++ A  ++      GV P+V TY   I  YC+    +  + +   M  
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  DVVT ++L+AG  R+   S +  L  EM ++G  P+  +Y +L+  L + G+  E
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M+   +     T+  +++ L K   TD      R        P  VTY +LI 
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCKA  +  A  +L E+ +   +PN +T+++++    +        E    MK +G   
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F K      A +    M+ +GV+++    ++L+N   + GK+E A  L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +    G   D   +T LIDGL KAG++  A +   E M++     +   YN  ++ L  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR-NMLPDAVVYNVFINCLCM 566

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK   A +    M       D  TY++M+ + C+      A KLL     S ++     
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              +V GL  +G   +AK + +++  A  S
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 204/473 (43%), Gaps = 39/473 (8%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + +   CKA+ +++AE ++++     + P+VVT++ +I+ + +    D        M+E 
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           GI+P+VVTY +LI G  +      +L++  +ML  G+  + +  +SL++ L Q GK +EA
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F+D     L+     +  +++GL K      A +  + L     +P+ V YN+ I  
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LC  G+ + A+  L E+ + G  P+  TY T++    R  +    L++L  MK      +
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 252 GFGYCTVIAAFVKIGRLKEAT-----------------------------------DYME 276
              Y T++A     G +++A                                    D  E
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+  G+  DI  YNTL+ + C  G    A ++L+EM   G   D  T   LI G CK+ 
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           ++  A      M       N+  +N ++  L   G+I  A  V   ME      ++ TY 
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +     K      A +L    +  G     S   A++     +G   +AK++
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 165/387 (42%), Gaps = 1/387 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  V   C+  R  +A A+  +  ++G  P+ VTY  LID+  +        ++L  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  D+VTY +L+    +        D L   L   + P+  +Y  L+  L +    D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA +V  +M    ++P   TF+ ++NG  K    D A    R +++ G  P +VTY  LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K      A  +  ++   G   N     +++    +N K +  + +       G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G +  A  + ++++   +  D V YN  IN  C  GK + A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM   G + D+ T+  +I   C+ G    A   L  M       NL  YN +V  L  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
            G ++ A  +   M V   F+ SS+ H
Sbjct: 637 TGAVEKAKYLLNEM-VSAGFSPSSLTH 662



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 151/336 (44%), Gaps = 38/336 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   + ++A++ + +   +G+ PD  TYN +I ++C+         +L+ M+ 
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 71  AGISPDVVTYNSLIAG---------------------------ATRNSLLSCS------- 96
           + I P+++TYN+L+AG                             R  L +CS       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 97  -LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            LD+ + M+  G+  D+  YN+L+  L   G   +A  V ++M+   + P T TFN ++ 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+ + DNA   +  +      P + T+N L+ GL   GR+  A  +L E+  SG  P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  +     +       + +   M  KG+      Y  +I+ F K G + +A +  
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 276 EQMVTDGVQLDIVSYNTLINLY---CKEGKLEAAYL 308
           + M   GV     +Y+ L++ +    +E K +  Y 
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYF 893



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 74/150 (49%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   CK++ L+ A A     +   + P++ T+N L+             T+L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M ++G+ P+ +TY+ L  G  + S    ++ L  EM+  G  P V +YN+L+    + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              +A  +F+DM    + P + T++I+++G
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSG 878


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C++NR+E  + +++D  +LG  PD+   N+ I   C+         ++ +MR  G 
Sbjct: 235 ISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGT 294

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
           SPDVVTY ++++G   N   + ++ L +EM++  + PDV+S  +L+  L +  K DEA  
Sbjct: 295 SPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFE 354

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           +   M+  D+      +N +++G  +    D A ++   ++ +G  P++VTYNIL+   C
Sbjct: 355 LASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYC 414

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
             G +  A  +++++  SG  P+  +Y  ++K   +  +       +S     G   D  
Sbjct: 415 TIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTV 474

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
               +I AF K  ++K A +  ++M   G+Q D V+Y TLIN     G    A  L ++M
Sbjct: 475 SCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQM 534

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
                + +   + I++  LCK G+ K A+    +M +     +   +N ++  LGK  + 
Sbjct: 535 LNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRA 594

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A+N+F+ M  +    D+ T+  ++  L    +   A ++    +++G+ + +   + +
Sbjct: 595 IEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERL 654

Query: 430 VDGLR 434
           +  L+
Sbjct: 655 ISVLK 659



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 180/403 (44%), Gaps = 14/403 (3%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TY+  I A CQ    +    +L  M + G SPD+   N  I    + + L  +L ++++M
Sbjct: 230 TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKM 289

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              G  PDV +Y +++  L    K  EA  ++++M+  DL P   +   ++ GLCKN   
Sbjct: 290 RTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKV 349

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D A  +   +        +  YN LI G  +AG +  A  I+  +  +G  P+ +TY  +
Sbjct: 350 DEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNIL 409

Query: 224 MKCCFRNRKYKLGL-----EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           +     N    +G+     +++  M+  G   D + Y  ++    K  +L +A  ++   
Sbjct: 410 L-----NHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDH 464

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G   D VS N LI+ +CK  K+++A  L  EM  +G + D  T+  LI+GL   G  
Sbjct: 465 MEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYY 524

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A    E M     D N+  YN ++  L K G    A  +F  M  K    D+ T++++
Sbjct: 525 NLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTL 584

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           ++ L K  R   A  L       GV       K ++ GL   G
Sbjct: 585 IYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEG 627



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 12/383 (3%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y +L+  Y +   FD+     + M  +G     V YN  I    +N    C  DL+++  
Sbjct: 161 YRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKN----CCFDLVEKYY 216

Query: 105 EMGIPPDV----WSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +M +        ++Y+  +  L Q  + +    +  DM     +P     NI +  LCK 
Sbjct: 217 DMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQ 276

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
               +AL+M   ++  G  P++VTY  ++ GLC   +   A  + +E+      P+  + 
Sbjct: 277 NRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSC 336

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    +N K     E+ S M           Y  +I+ F + G + +A   +  M T
Sbjct: 337 GALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRT 396

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +G + DIV+YN L+N YC  G +E A  L+ +ME  G   D+Y++  L+ GLCK   +  
Sbjct: 397 NGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDK 456

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A   +    ++G   +  + N ++D   K  K+  A+ +F+ M  K    D+ TY ++++
Sbjct: 457 AFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLIN 516

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            L        A +L    L + +
Sbjct: 517 GLFSVGYYNLAEELFEQMLNAQI 539



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 180/395 (45%), Gaps = 4/395 (1%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L R++  G++     Y  L++G  R       ++  DEM+  G       YN  +  L 
Sbjct: 145 FLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLV 204

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +    D   + +   +         T++  ++ LC++   +    +   + K G  P++ 
Sbjct: 205 KNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIW 264

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
             NI I  LCK  RL  A  +++++   G +P+ +TY T++     N+K+   + +   M
Sbjct: 265 ACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEM 324

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
            ++    D F    +I    K  ++ EA +   +M+T  ++L +  YN LI+ + + G +
Sbjct: 325 VKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSI 384

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + AY ++  M   G E D  T+ IL++  C  G ++ A   +  M   G + +  +YN +
Sbjct: 385 DKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQL 444

Query: 364 VDRLGKDGKIDHAIN-VFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K  ++D A   V + MEV    D+ + + ++   CK K++ SA +L       G+
Sbjct: 445 LKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGM 504

Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +        +++GL   G    A+++  ++  A+I
Sbjct: 505 QADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQI 539



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 133/283 (46%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +LS  + N  +  F +A  ++KA  II      G  PD+VTYN+L++ YC     +    
Sbjct: 365 ELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEK 424

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++ +M  +G++PD  +YN L+ G  +   L  +   + + +E+G   D  S N L+    
Sbjct: 425 LIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFC 484

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +  K   A  +F++M    +     T+  ++NGL    Y + A  +F  +      P + 
Sbjct: 485 KTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVN 544

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YNI++  LCK G  + A+ I   +     +P+ +T+ T++    +  +    L +   M
Sbjct: 545 LYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDM 604

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
           + +G   D   +  +I+  +  G+   A +  E M+ +G+ LD
Sbjct: 605 RTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILD 647



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 6/271 (2%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           +  N++++GL  +       W  +      H+  AI Y  ++   F +  + L  E L  
Sbjct: 91  IVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAY--LVSLLFMDGNFALLSEFLGR 148

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           +K +G       Y  +++ +V+ G+     +  ++MV  G +   V YN  I +  K   
Sbjct: 149 VKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCC 208

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            +      D    +GF    +T++  I  LC++  I+  +  L  M+K+G   ++ A N 
Sbjct: 209 FDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNI 268

Query: 363 IVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +  L K  ++  A+ + E M  K    D  TY ++V  LC  K+   A  L    +K  
Sbjct: 269 YIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRD 328

Query: 419 VRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++    +  A++ GL  +    EA ++ S++
Sbjct: 329 LKPDVFSCGALIFGLCKNNKVDEAFELASRM 359


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 207/479 (43%), Gaps = 83/479 (17%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI----- 73
           +A+ + +AEAI+ +    G  PDV ++ +LI  + +  SF  G + L+RM EAG+     
Sbjct: 6   EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAI 65

Query: 74  -----------------------------SPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
                                        +P+VV+YN +I G  +   +  +L  L EM 
Sbjct: 66  LYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREME 125

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E+G PP   +Y+S++    + G   +A  VF +M      P    FN++L+GL + R   
Sbjct: 126 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIH 185

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A  +FR +   G  P++VTYN +I GLCK  +L  A ++L+ +     +P  +TYTT++
Sbjct: 186 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 245

Query: 225 KCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
               +  + +   E+   M       T   +    +I    K  R  EA +  ++M   G
Sbjct: 246 DHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRG 305

Query: 283 VQLDIVSYNTLINLYCKEGKLEAA----YLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +   +V+YNTL+       KL+ A    Y +LD++         +T+ ILI  LCK   +
Sbjct: 306 ISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNM----FTYEILISSLCKTDQV 361

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-------------- 384
           + A   L  M   GF  +L+ +  ++ RL + G++D A  +++ M               
Sbjct: 362 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 421

Query: 385 -------------------------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                                    V D FTY  +V  LC   +   A KL+   ++ G
Sbjct: 422 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 7/322 (2%)

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  + ++M     +P   +  +++ G  K+            + + G  P  + YN LI
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             LCKAG L  A   LK +     APN ++Y  I+    + R  +  L  L  M+  G+ 
Sbjct: 72  SCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYCKARNIEKALAFLREMEELGHP 130

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y +++ +F K G + +A D   +M   G + DIV++N L++   +  K+  A  L
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              M  +G + D  T+  +I GLCK   +  A   LE M +         Y  ++D L K
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250

Query: 370 DGKIDHAINVFESME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
             ++  A  VFE M        + +++   +++ LCKA+R   A ++       G+    
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                +++GL  +   ++A ++
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMEL 332



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 5/153 (3%)

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I   V+   + +A   +E+M   G   D+ S+  LI  + K G  +     LD M + G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +   +  LI  LCKAG +  A  +L+ M +     N+ +YN I+D   K   I+ A+ 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 379 VFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
               ME          YSS+V + CK   +  A
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKA 152



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 47/102 (46%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S ++  + +    +A RL+ A  +  +  R+     V + N+L+D   +  S D     L
Sbjct: 379 SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFL 438

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
            +M + GI PD  TY+ L+ G         +  L++E++  G
Sbjct: 439 KQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 210/424 (49%), Gaps = 5/424 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +C   ++N  +KA   I + ++  V+ D  ++ ++I   C+   F  G+ +L  + 
Sbjct: 127 FNNLLCLLIRSNYFDKA-WWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE 185

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G+SP+VV Y +LI G  ++  +  + +L  +M  +G+ P+  +Y+ LM+  F+ G   
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  +++++M    + P    +N +++  C +   D A ++F  +++ G    ++TYNILI
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLC+  +   A  ++ ++   G +PN +TY  ++      RK    + + + +K  G +
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
                Y T+IA + K+  L  A D +++M    +    V+Y  LI+ + +    E A  +
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEM 425

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
              MEK G   D YT+++L+ GLC  GN+K A    + + ++    N   YN ++    K
Sbjct: 426 HSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCK 485

Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           +G    A+ +   M     V +  ++ S +  LC+ ++   A  LL   + SG++   S 
Sbjct: 486 EGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545

Query: 426 QKAV 429
            K V
Sbjct: 546 YKMV 549



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 38/413 (9%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y+ +++AY    S D   T L+ M   G  P   T+N+L+    R++    +  + +E+ 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151

Query: 105 ----------------------------------EMGIPPDVWSYNSLMHCLFQLGKPDE 130
                                             E G+ P+V  Y +L+    + G    
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVML 211

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M    L P   T+++++NG  K        +M+  +++ G VP    YN LI 
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             C  G +  A  +  E+ + G A   +TY  ++    R +K+   ++++  + + G + 
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +I  F  + ++  A     Q+ + G+   +V+YNTLI  Y K   L  A  L+
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EME++     K T+TILID   +  + + A      M K G   ++  Y+ ++  L   
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           G +  A  +F+S+       +S  Y++M+H  CK      A +LL   ++SG+
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 35/250 (14%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   C+  +  +A  ++    ++G+ P++VTYN+LI+ +C     D+   + N+++ 
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKS 361

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE------------------------- 105
           +G+SP +VTYN+LIAG ++   L+ +LDL+ EM E                         
Sbjct: 362 SGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEK 421

Query: 106 ----------MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                      G+ PDV++Y+ L+H L   G   EA+++F+ +    L P +  +N M++
Sbjct: 422 ACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIH 481

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK   +  ALR+   + + G VP + ++   I  LC+  + + A  +L ++ +SG  P
Sbjct: 482 GYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKP 541

Query: 216 NAITYTTIMK 225
           +   Y  + K
Sbjct: 542 SVSLYKMVHK 551



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 162/389 (41%), Gaps = 48/389 (12%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           ++ +M +   +  ++ +N+      +++  S S  +L+ +L  G+ P   S       + 
Sbjct: 10  LIQKMVKVPPTKALLLFNTATYQGLQHTSHSISF-ILNHLLSSGMLPQAQS------LIL 62

Query: 124 QLGKPDEANRVFQDMICGDLTPC---TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
           +L      + +   +     TPC   T  ++ ++N    +  TD AL     +   G VP
Sbjct: 63  RLISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVP 122

Query: 181 ELVTYN----------------------------------ILIKGLCKAGRLRTARWILK 206
              T+N                                  I+IKG C+AG       +L 
Sbjct: 123 LSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLA 182

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            L + G +PN + YTT++  C ++    L   +   M R G   +   Y  ++  F K G
Sbjct: 183 MLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQG 242

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
             +E     E M   G+  +  +YN LI+ YC +G ++ A+ +  EM ++G  C   T+ 
Sbjct: 243 LQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYN 302

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
           ILI GLC+      A   +  +NK+G   N+  YN +++      K+D A+ +F  ++  
Sbjct: 303 ILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSS 362

Query: 387 ----DSFTYSSMVHNLCKAKRLPSASKLL 411
                  TY++++    K + L  A  L+
Sbjct: 363 GLSPTLVTYNTLIAGYSKVENLAGALDLV 391


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 205/473 (43%), Gaps = 44/473 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA   ++AE +    I  GV P+  TYN LI  Y     +     +L +M   G+ PD
Sbjct: 217 LCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPD 276

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY SL+      S +   LDL   M+E G+ PD   +N       + G  D+A  +F 
Sbjct: 277 CYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 333

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    L+P    +  +++ LCK    D+A   F  +   G  P +V +N L+ GLC   
Sbjct: 334 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 393

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           +   A  ++ E+ D G  PNA+ + T++   C   R  + G  ++  M+  G   D F Y
Sbjct: 394 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME-GRRLIDLMEHVGVRPDAFSY 452

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I+ +   GR  EA    + MV+ G+    V+YNTL++ YC   +++ AY L  EM +
Sbjct: 453 TPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLR 512

Query: 316 QGF-----------------------------------ECDKYTHTILIDGLCKAGNIKG 340
           +G                                    +CD YT+ I+++GLCK+  +  
Sbjct: 513 KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDE 572

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A    + +   G   N+  +  ++  L K G+ + A+++F ++     V +  TY  +  
Sbjct: 573 AFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 632

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           NL +   L     L  +  K+G         A+V  L H G    A    SK+
Sbjct: 633 NLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 685



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 200/440 (45%), Gaps = 10/440 (2%)

Query: 17  FCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           FC  NR E+A  ++    +       P+VVTY  +ID  C+   FD    +  +M + G+
Sbjct: 179 FCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGV 238

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+  TYN LI G          + +L++M   G+ PD ++Y SL++ L  L    E + 
Sbjct: 239 KPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALS---EMHS 295

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
               M+   L+P    FNI  +   K    D A+ +F  +++HG  P +V Y  LI  LC
Sbjct: 296 FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC 355

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K GR+  A     ++ + G  PN + + +++       K++   E++  M  +G   +  
Sbjct: 356 KLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 415

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + T+I     +GR+ E    ++ M   GV+ D  SY  LI+ YC  G+ + A  + D M
Sbjct: 416 FFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGM 475

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G    + T+  L+ G C A  I  A      M + G    +  YN I+  L +  + 
Sbjct: 476 VSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRF 535

Query: 374 DHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
             A    +N+  S    D +TY+ +++ LCK+  +  A K+  S    G+++       +
Sbjct: 536 SEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIM 595

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +  L   G + +A  + + I
Sbjct: 596 IGALLKGGRKEDAMDLFAAI 615



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 174/369 (47%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI    + K   ++KA  I     + G+ P+VV Y  LIDA C+    D      N+
Sbjct: 310 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 369

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++P++V +NSL+ G         + +L+ EML+ GI P+   +N+L+  L  +G+
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E  R+   M    + P   ++  +++G C    TD A ++F G+   G  P  VTYN 
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G C A R+  A  + +E+   G  P  +TY TI+   F+ +++    E+   M   G
Sbjct: 490 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 549

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  ++    K   + EA    + + + G+QL+I+++  +I    K G+ E A 
Sbjct: 550 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 609

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G   +  T+ ++ + L + G+++        M K G   N +  N +V RL
Sbjct: 610 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 669

Query: 368 GKDGKIDHA 376
              G I  A
Sbjct: 670 LHRGDISRA 678



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 173/380 (45%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK  R++ AE      I  GV P++V +N L+   C    ++    ++  M + GI P
Sbjct: 353 ALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP 412

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + V +N+LI        +     L+D M  +G+ PD +SY  L+      G+ DEA +VF
Sbjct: 413 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVF 472

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   L+P   T+N +L+G C     D+A  +FR + + G  P +VTYN ++ GL + 
Sbjct: 473 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 532

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A+ +   + +SG   +  TY  I+    ++       ++  ++  KG   +   +
Sbjct: 533 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 592

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I A +K GR ++A D    +  +G+  ++V+Y  +     +EG LE    L   MEK
Sbjct: 593 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 652

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   +      L+  L   G+I  A  +L  +++  F       + ++     D    H
Sbjct: 653 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHH 712

Query: 376 AINVFESMEVKDSFTYSSMV 395
           A ++ E     +    S+++
Sbjct: 713 AKSLPEKYHFLNEANSSALI 732



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 197/444 (44%), Gaps = 13/444 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF-DAGYTILNRMR 69
           +I +   C+  RL+ + A     ++ G   + +  N L+   C      +A   +L RM 
Sbjct: 102 SILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMP 161

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLG 126
           E G +PD V+Y+ L+ G    +    +L+LL  M        PP+V +Y +++  L +  
Sbjct: 162 ELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQ 221

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             D A  VFQ MI   + P   T+N +++G          ++M   +   G  P+  TY 
Sbjct: 222 LFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYG 281

Query: 187 ILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            L+  LC    + +   ++ E G S  H    I ++   KC   ++     ++I + M++
Sbjct: 282 SLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK----AMDIFNKMRQ 337

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G + +   Y  +I A  K+GR+ +A     QM+ +GV  +IV +N+L+   C   K E 
Sbjct: 338 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 397

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L+ EM  QG   +      LI  LC  G +   R  ++ M  +G   +  +Y  ++ 
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 457

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
                G+ D A  VF+ M          TY++++H  C A R+  A  L    L+ GV  
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 517

Query: 422 LKSAQKAVVDGLRHSGCRREAKKI 445
                  ++ GL  +    EAK++
Sbjct: 518 GVVTYNTILHGLFQTKRFSEAKEL 541



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 27/361 (7%)

Query: 83  LIAGATRNSLLSC--SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN-------- 132
           +IA   R+  L    +L L DE+L    P  V ++N +++ + +  +             
Sbjct: 18  IIAARARSGSLGLDDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESE 77

Query: 133 ---RVFQDMI--CG-DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
               +F  M+  C   + P T T++I++  LC+     ++   F  + K G+    +  N
Sbjct: 78  LVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVIN 137

Query: 187 ILIKGLCKAGRLRTAR-WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            L+KGLC   R+  A   +L+ + + G  P+ ++Y+ ++K      + +  LE+L  M  
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197

Query: 246 ---KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
              +    +   Y TVI    K      A    +QM+ +GV+ +  +YN LI+ Y   GK
Sbjct: 198 DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK 257

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            +    +L++M  +G + D YT+  L++ LC    +      L+ M + G   +   +N 
Sbjct: 258 WKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHS---FLDLMVENGLSPDHHIFNI 314

Query: 363 IVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
                 K G ID A+++F  M       +   Y +++  LCK  R+  A       +  G
Sbjct: 315 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 374

Query: 419 V 419
           V
Sbjct: 375 V 375


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 26/429 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CK   ++ A++     ++ G++P V ++N+LI+  C   S      + + M 
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD VTYN L  G     ++S + +++ +ML+ G+ PDV +Y  L+    QLG  D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344

Query: 130 EANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
               + +DM+        + PC+    +ML+GLCK    D AL +F  ++  G  P+LV 
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLCK G+   A W+  E+ D    PN+ T+  ++    +         +L ++ 
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D   Y  VI  + K G ++EA +  + ++  G+   + ++N+LI  YCK   + 
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +LD ++  G      ++T L+D     GN K        M   G       Y+ I 
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580

Query: 365 DRLGKDGK---IDHAI--NVFE-------SMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
             L +  K    +H +   +FE        ME +    D  TY++++  LC+ K L S +
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL-SGA 639

Query: 409 KLLLSCLKS 417
            + L  +KS
Sbjct: 640 FVFLEIMKS 648



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 184/372 (49%), Gaps = 18/372 (4%)

Query: 56  VSFDAGYTILNRMREAGISPDVV---------TYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           VS  +  ++L   RE     DV          TY++++ G  R   L  ++  L      
Sbjct: 157 VSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 216

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
            I P V S+NS+M    +LG  D A   F  ++   L P   + NI++NGLC       A
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 276

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 224
           L +   + KHG  P+ VTYNIL KG    G +  A  +++++ D G +P+ ITYT ++  
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 336

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV-IAAFVKIGRLKEATDYMEQMVTDGV 283
           +C   N    +GL +L  M  +G+  +    C+V ++   K GR+ EA     QM  DG+
Sbjct: 337 QCQLGN--IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+V+Y+ +I+  CK GK + A  L DEM  +    +  TH  L+ GLC+ G +  AR 
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLC 399
            L+ +   G   ++  YN ++D   K G I+ A+ +F    E+       T++S+++  C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514

Query: 400 KAKRLPSASKLL 411
           K + +  A K+L
Sbjct: 515 KTQNIAEARKIL 526



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 213/470 (45%), Gaps = 41/470 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            I +C  C+   ++    ++ D +  G  L  ++  ++++   C+    D   ++ N+M+
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+SPD+V Y+ +I G  +      +L L DEM +  I P+  ++ +L+  L Q G   
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +   +I    T     +NI+++G  K+   + AL +F+ + + G  P + T+N LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK   +  AR IL  +   G AP+ ++YTT+M         K   E+   MK +G  
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQ------------MVTDGVQLDIVSYNTLINLY 297
                Y  +     +  + +     + +            M ++G+  D ++YNT+I   
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C+   L  A++ L+ M+ +  +    T+ ILID LC  G I+ A   +  + +     + 
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            AY  ++      G  + A+ +F  +        ++D   YS++++ LC+        + 
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD---YSAVINRLCR--------RH 739

Query: 411 LLSCL---KSGVRILKSAQKAVVD-GLRHSGCRREAKKIQSKIRMAKISH 456
           L++C     +GV  L S +++ V   +  + CRR    ++      K+SH
Sbjct: 740 LMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTLSVE------KLSH 783



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 14/268 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L NI +  + K+  +E+A  +    I  G+ P V T+N LI  YC+  +      I
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLF 123
           L+ ++  G++P VV+Y +L+  A  N   + S+D L  EM   GIPP   +Y+ +   L 
Sbjct: 526 LDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584

Query: 124 QLGKPDEAN-----RVFQ-------DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           +  K +  N     R+F+       DM    + P   T+N ++  LC+ ++   A     
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++         TYNILI  LC  G +R A   +  L +   + +   YTT++K      
Sbjct: 645 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVI 259
             ++ +++   +  +G+      Y  VI
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 219
           R  D++L + + ++         +YN ++    +  ++    W + KE+ D     N  T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 189

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R +K +  +  L   + K        + ++++ + K+G +  A  +   ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 323
             G+   + S+N LIN  C  G +  A  L  +M K G E D                  
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 324 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 363
                              T+TIL+ G C+ GNI    + L+ M   GF+ N +   + +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K G+ID A+++F  M+      D   YS ++H LCK  +   A  L L       
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 427

Query: 420 RILKSAQK--AVVDGLRHSGCRREAKKI 445
           RIL +++   A++ GL   G   EA+ +
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSL 455


>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
          Length = 332

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 164/318 (51%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDVV+Y+ +I+ + +    D  Y+  N M +  ISP+VVTYNS+IA   +   +  ++++
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  M++ G+ PD  +YNS++H     G+P EA    + M    + P   T+N +++ LCK
Sbjct: 70  LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N     A ++F  + K G  P++ TY  L++G    G L     +L  +  +G  PN   
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           ++ ++    +  K +  + + S M+++G   +   Y TVI    K GR+++A  Y EQM+
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            +G++ D + YN+LI+  C   K E A  L  EM  +G          +ID  CK G + 
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 309

Query: 340 GARLHLEYMNKIGFDSNL 357
            +    + M +IG   ++
Sbjct: 310 ESVKLFDLMVRIGVKPDI 327



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 164/316 (51%), Gaps = 4/316 (1%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PPDV SY+++++  F+ G  D+    + +M+   ++P   T+N ++  LCK +  D A+ 
Sbjct: 9   PPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAME 68

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +   + K G +P+ +TYN ++ G C +G+ + A   LK++   G  P+ +TY ++M    
Sbjct: 69  VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 128

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +N +     +I  +M ++G   D   Y T++  +   G L E    ++ MV +G+  +  
Sbjct: 129 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 188

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            ++ L+  Y K+ K+E A L+  +M +QG   +  T+  +ID LCK+G ++ A L+ E M
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
              G   +   YN ++  L    K + A  +F  M  +     +  ++S++ + CK  R+
Sbjct: 249 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 308

Query: 405 PSASKLLLSCLKSGVR 420
             + KL    ++ GV+
Sbjct: 309 IESVKLFDLMVRIGVK 324



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 139/279 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA  ++   ++ GV+PD +TYN ++  +C           L +MR 
Sbjct: 51  NSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS 110

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTYNSL+    +N   + +  + D M + G+ PD+ +Y +L+      G   E
Sbjct: 111 DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVE 170

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   + P    F+I++    K    + A+ +F  +++ G  P  VTY  +I 
Sbjct: 171 MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVID 230

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK+GR+  A    +++ D G  P++I Y +++       K++   E+   M  +G   
Sbjct: 231 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 290

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
               + ++I +  K GR+ E+    + MV  GV+ DI++
Sbjct: 291 STIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 8/312 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K   L+K  +   + +   + P+VVTYN +I A C+  + D    +L  M ++G+ PD
Sbjct: 22  FFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 81

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            +TYNS++ G   +     ++  L +M   G+ PDV +YNSLM  L + G+  EA ++F 
Sbjct: 82  CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 141

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL----QKHGFVPELVTYNILIKGL 192
            M    L P   T+  +L G      T  AL    GL     ++G  P    ++IL+   
Sbjct: 142 SMTKRGLKPDITTYGTLLQGYA----TKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 197

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
            K  ++  A  +  ++   G  PNA+TY T++    ++ + +  +     M  +G   D 
Sbjct: 198 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 257

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y ++I +     + ++A +   +M+  G+ L  + +N++I+ +CKEG++  +  L D 
Sbjct: 258 IVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDL 317

Query: 313 MEKQGFECDKYT 324
           M + G + D  T
Sbjct: 318 MVRIGVKPDIIT 329



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 9/311 (2%)

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           GD  P   +++ ++NG  K    D     +  +      P +VTYN +I  LCKA  +  
Sbjct: 6   GDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDK 65

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A  +L  +  SG  P+ +TY +I+     + + K  +  L  M+  G   D   Y +++ 
Sbjct: 66  AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 125

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              K GR  EA    + M   G++ DI +Y TL+  Y  +G L   + LLD M + G   
Sbjct: 126 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 185

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
           + Y  +IL+    K   ++ A L    M + G + N   Y  ++D L K G+++ A+  F
Sbjct: 186 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 245

Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
           E M  +    DS  Y+S++H+LC   +   A +L L  L  G+ +      +++D    S
Sbjct: 246 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIID----S 301

Query: 437 GCRREAKKIQS 447
            C +E + I+S
Sbjct: 302 HC-KEGRVIES 311



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 64/131 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I VC + K  ++E+A  +     + G+ P+ VTY  +ID  C+    +       +M
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+ PD + YNSLI           + +L  EML+ GI      +NS++    + G+ 
Sbjct: 249 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 308

Query: 129 DEANRVFQDMI 139
            E+ ++F  M+
Sbjct: 309 IESVKLFDLMV 319



 Score = 42.4 bits (98), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 4/99 (4%)

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           ++ +Y+ +++   K+G +D   + +  M  K    +  TY+S++  LCKA+ +  A ++L
Sbjct: 11  DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70

Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            + +KSGV        ++V G   SG  +EA     K+R
Sbjct: 71  TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR 109


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 190/410 (46%), Gaps = 4/410 (0%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTY +LIDA C+  + D    +L  M E  ISP+VVT++S+I G  +  LL  + + 
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M E GI P+V +Y +L+   F+    D A  V+ DM+C  +       + ++NGL +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N   + A+ +F+     G   + V Y  LI GL KAG + TA    +EL D    P+A+ 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y   + C     K+K     L+ M+  G   D   Y T+I +  + G   +A   + +M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              ++ ++++YNTL+      G +E A  LL+EM   GF     TH  ++    ++  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
                 E+M   G  +++  YN ++  L   G    A  V E M       D+ T+++++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              CK+  L +A       L   +    +    ++ GL   G   EA  +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 203/454 (44%), Gaps = 46/454 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGY-------------------TILNRMRE------- 70
           G+ P+VVTY  LID + +F   DA                     +++N +R+       
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 71  ---------AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
                    +G+S D V Y +LI G  +   +  +     E+++  + PD   YN  ++C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L  LGK  EA     +M    L P  +T+N M+   C+   T  AL++   ++     P 
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYN L+ GL   G +  A+++L E+  +G +P+++T+  +++ C ++R+  + L+I  
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D   Y T++      G  ++AT  +E+M+  G+  D +++N LI  +CK  
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A+    +M  Q    +  T   L+ GL   G I  A   L  M K G + N   Y+
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +    GK      A+ ++  M     V    TY++++ +  KA  +  A +L     K 
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863

Query: 418 GVR-------ILKSAQKAVVDGLRHSGCRREAKK 444
           GV        IL S    + +G     C ++ K+
Sbjct: 864 GVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 203/450 (45%), Gaps = 6/450 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FC+A +++ A  ++      GV P+V TY   I  YC+    +  + +   M  
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  DVVT ++L+AG  R+   S +  L  EM ++G  P+  +Y +L+  L + G+  E
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M+   +     T+  +++ L K   TD      R        P  VTY +LI 
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCKA  +  A  +L E+ +   +PN +T+++++    +        E    MK +G   
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F K      A +    M+ +GV+++    ++L+N   + GK+E A  L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +    G   D   +T LIDGL KAG++  A +   E M++     +   YN  ++ L  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR-NMLPDAVVYNVFINCLCM 566

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK   A +    M       D  TY++M+ + C+      A KLL     S ++     
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              +V GL  +G   +AK + +++  A  S
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 205/466 (43%), Gaps = 46/466 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  + + C+   L  A A++         P  V YN+L+ A        A   +L  M 
Sbjct: 76  LNALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAALSDHAHAPA---VLAEMC 127

Query: 70  EAGISPDVVTYNSLIAGATRN--------------------------SLL--------SC 95
           + G+  D VT N+L+AG  RN                          SLL          
Sbjct: 128 KRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPA 187

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L + D M   G+P DV  YN+L+    + G+ D A  V   M    + P  AT+   + 
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             C+ +  + A  ++ G+ ++G + ++VT + L+ GLC+ GR   A  + +E+   G AP
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY T++    +  + K  L +L  M  +G   D   Y  ++    K G+  E  D +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
              ++D +  + V+Y  LI+  CK   ++ A  +L EME++    +  T + +I+G  K 
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTY 391
           G +  A  +   M + G + N+  Y  ++D   K    D A+ V+  M    VK + F  
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV 487

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            S+V+ L +  ++  A  L      SG+ +       ++DGL  +G
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 204/474 (43%), Gaps = 39/474 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +   CKA+ +++AE ++++     + P+VVT++ +I+ + +    D        M+E
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P+VVTY +LI G  +      +L++  +ML  G+  + +  +SL++ L Q GK +E
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+D     L+     +  +++GL K      A +  + L     +P+ V YN+ I 
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  G+ + A+  L E+ + G  P+  TY T++    R  +    L++L  MK      
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 251 DGFGYCTVIAAFVKIGRLKEAT-----------------------------------DYM 275
           +   Y T++A     G +++A                                    D  
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E M+  G+  DI  YNTL+ + C  G    A ++L+EM   G   D  T   LI G CK+
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            ++  A      M       N+  +N ++  L   G+I  A  V   ME      ++ TY
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +     K      A +L    +  G     S   A++     +G   +AK++
Sbjct: 803 DILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 165/387 (42%), Gaps = 1/387 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  V   C+  R  +A A+  +  ++G  P+ VTY  LID+  +        ++L  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  D+VTY +L+    +        D L   L   + P+  +Y  L+  L +    D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA +V  +M    ++P   TF+ ++NG  K    D A    R +++ G  P +VTY  LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K      A  +  ++   G   N     +++    +N K +  + +       G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G +  A  + ++++   +  D V YN  IN  C  GK + A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM   G + D+ T+  +I   C+ G    A   L  M       NL  YN +V  L  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
            G ++ A  +   M V   F+ SS+ H
Sbjct: 637 TGAVEKAKYLLNEM-VSAGFSPSSLTH 662



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 161/361 (44%), Gaps = 35/361 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   + ++A++ + +   +G+ PD  TYN +I ++C+         +L+ M+ 
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 71  AGISPDVVTYNSLIAG---------------------------ATRNSLLSCS------- 96
           + I P+++TYN+L+AG                             R  L +CS       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 97  -LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            LD+ + M+  G+  D+  YN+L+  L   G   +A  V ++M+   + P T TFN ++ 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+ + DNA   +  +      P + T+N L+ GL   GR+  A  +L E+  SG  P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  +     +       + +   M  KG+      Y  +I+ F K G + +A +  
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M   GV     +Y+ L++ + +          L +M+++GF   K T + +     K 
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 336 G 336
           G
Sbjct: 918 G 918



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+  YN L+   C          +L  M  +GI+PD +T+N+LI G  ++S L  +
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNA 748

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                +ML   I P++ ++N+L+  L  +G+  EA  V  +M    L P   T++I+  G
Sbjct: 749 FATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATG 808

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K      A+R++  +   GFVP++ TYN LI    KAG +  A+ + K++   G  P 
Sbjct: 809 HGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPT 868

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           + TY  ++    R R      + L  MK KG++        +  AF K G   +A   ++
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928

Query: 277 QM 278
            +
Sbjct: 929 NL 930



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 96/202 (47%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   CK++ L+ A A     +   + P++ T+N L+             T+L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M ++G+ P+ +TY+ L  G  + S    ++ L  EM+  G  P V +YN+L+    + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  +F+DM    + P + T++I+++G  + R      +  + +++ GF P   T +
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 187 ILIKGLCKAGRLRTARWILKEL 208
            + +   K G    A+ +LK L
Sbjct: 909 FICRAFSKPGMTWQAQRLLKNL 930


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 187/436 (42%), Gaps = 39/436 (8%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   C   R+E+   +I      G +P  V YN+LID YC+      G  +L  M   
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMK 340

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           GI P VVTY ++I    R S L+    LL EM E G+ P+V  YN++++ L +     +A
Sbjct: 341 GIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQA 400

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             V   M+     P   TFN ++   C+    + AL++ R   +    P  ++Y  LI G
Sbjct: 401 LAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHG 460

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAIT-------------------------------- 219
            C  G +  A  +L E+   GH P+ +T                                
Sbjct: 461 FCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPD 520

Query: 220 ---YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y  ++    + R       +L  M  +    D F Y T+I  F++  +L +A    E
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFE 580

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G   DIV+YN +I  YCK G +  A + +  M K G   D++T+T LIDG  K G
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT----YS 392
           +IK A   L  M K     N+  Y  ++      G  D A  +F SM+ +  F     Y+
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700

Query: 393 SMVHNLCKAKRLPSAS 408
            ++ +L K  +   A+
Sbjct: 701 VLIGSLFKKDKAIQAA 716



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 178/380 (46%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           + + L K E+++ +    G+ P+V  YN +I A C+  S      +LN+M  +   PDVV
Sbjct: 358 RKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVV 417

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T+N+LIA   R   +  +L LL E +   + P+  SY  L+H     G+   A+ +  +M
Sbjct: 418 TFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEM 477

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I    TP   T   +++GL  +   D AL +   + +   +P+   YN+LI GLCK   L
Sbjct: 478 IGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRML 537

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A+ +L E+ +    P+   YTT++    R+ K     +I   M+ KG   D   Y  +
Sbjct: 538 SAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAM 597

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I  + K G + EA   M  M   G   D  +Y TLI+ Y K+G ++AA   L +M K+  
Sbjct: 598 IKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           + +  T+  LI G C  GN   A +    M   G   N+  Y  ++  L K  K   A  
Sbjct: 658 KPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAA 717

Query: 379 VFESMEVKDSFTYSSMVHNL 398
            FE M +       + +H L
Sbjct: 718 YFEHMLLNHCSPNDATMHYL 737



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 164/343 (47%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + ++ N  +   CK     +A A++   +     PDVVT+N LI A+C+    +    +L
Sbjct: 380 NVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLL 439

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
                  + P+ ++Y  LI G      +  + DLL EM+  G  PDV +  +L+H L   
Sbjct: 440 REAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVS 499

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+ DEA  V + M    + P    +N++++GLCK R    A  +   + +    P+   Y
Sbjct: 500 GQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVY 559

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
             LI G  ++ +L  AR I + + + G   + + Y  ++K   ++      +  +S+M++
Sbjct: 560 TTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRK 619

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D F Y T+I  + K G +K A  ++  M+    + +IV+Y +LI  YC  G  ++
Sbjct: 620 VGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDS 679

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           A +L   M+ +G   +   +T+LI  L K      A  + E+M
Sbjct: 680 AEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHM 722



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 149/321 (46%), Gaps = 6/321 (1%)

Query: 131 ANRVFQDMICGDLTPCTATFN--IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           A R++ +M+  D       ++  +M+ GLC     +   R+       G VP  V YN+L
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G C+ G +     +L E+   G  P  +TY  I+    R         +L  MK +G 
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + +   Y TVI A  K     +A   + QMV      D+V++NTLI  +C+EG +E A  
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL E  ++  E ++ ++T LI G C  G +  A   L  M   G   ++     ++  L 
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             G++D A+ V E M     + D+  Y+ ++  LCK + L +A  LL+  L+  V+  K 
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
               ++DG   S    +A+KI
Sbjct: 558 VYTTLIDGFIRSDKLSDARKI 578



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 50/258 (19%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F ++++L  A  I       G   D+V YN +I  YC+    +     ++ MR+ G  PD
Sbjct: 566 FIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPD 625

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEM------------------------------ 106
             TY +LI G  +   +  +L  L +M++                               
Sbjct: 626 EFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFA 685

Query: 107 -----GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
                G+ P+V  Y  L+  LF+  K  +A   F+ M+    +P  AT + ++NGL   R
Sbjct: 686 SMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCR 745

Query: 162 Y---------TDNA------LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           Y         TD A      L +F+GL   G  P +  YN +I  LC+   L  A  + +
Sbjct: 746 YGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKE 805

Query: 207 ELGDSGHAPNAITYTTIM 224
           ++ + G  P+ +T+ +++
Sbjct: 806 KMSNKGCLPDPVTFLSLL 823


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 4/372 (1%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+ VTY +LIDA C+  + D    +L  M E  ISP+VVT++S+I G  +  LL  + + 
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
              M E GI P+V +Y +L+   F+    D A  V+ DM+C  +       + ++NGL +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           N   + A+ +F+     G   + V Y  LI GL KAG + TA    +EL D    P+A+ 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y   + C     K+K     L+ M+  G   D   Y T+I +  + G   +A   + +M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
              ++ ++++YNTL+      G +E A  LL+EM   GF     TH  ++    ++  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
                 E+M   G  +++  YN ++  L   G    A  V E M       D+ T+++++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 396 HNLCKAKRLPSA 407
              CK+  L +A
Sbjct: 737 LGHCKSSHLDNA 748



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 199/417 (47%), Gaps = 7/417 (1%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLI 84
           A A++ +  + GV  D VT N L+   C+    DA   + +R    GI   DV+ +N+LI
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLI 176

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
           AG  R      +L + D M   G+P DV  YN+L+    + G+ D A  V   M    + 
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P  AT+   +   C+ +  + A  ++ G+ ++G + ++VT + L+ GLC+ GR   A  +
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            +E+   G APN +TY T++    +  + K  L +L  M  +G   D   Y  ++    K
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G+  E  D +   ++D +  + V+Y  LI+  CK   ++ A  +L EME++    +  T
Sbjct: 357 QGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM- 383
            + +I+G  K G +  A  +   M + G + N+  Y  ++D   K    D A+ V+  M 
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 384 --EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
              VK + F   S+V+ L +  ++  A  L      SG+ +       ++DGL  +G
Sbjct: 477 CEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 203/454 (44%), Gaps = 46/454 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGY-------------------TILNRMRE------- 70
           G+ P+VVTY  LID + +F   DA                     +++N +R+       
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503

Query: 71  ---------AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
                    +G+S D V Y +LI G  +   +  +     E+++  + PD   YN  ++C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L  LGK  EA     +M    L P  +T+N M+   C+   T  AL++   ++     P 
Sbjct: 564 LCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYN L+ GL   G +  A+++L E+  +G +P+++T+  +++ C ++R+  + L+I  
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D   Y T++      G  ++AT  +E+M+  G+  D +++N LI  +CK  
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A+    +M  Q    +  T   L+ GL   G I  A   L  M K G + N   Y+
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +    GK      A+ ++  M     V    TY++++ +  KA  +  A +L     K 
Sbjct: 804 ILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863

Query: 418 GVR-------ILKSAQKAVVDGLRHSGCRREAKK 444
           GV        IL S    + +G     C ++ K+
Sbjct: 864 GVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 203/450 (45%), Gaps = 6/450 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FC+A +++ A  ++      GV P+V TY   I  YC+    +  + +   M  
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  DVVT ++L+AG  R+   S +  L  EM ++G  P+  +Y +L+  L + G+  E
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M+   +     T+  +++ L K   TD      R        P  VTY +LI 
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCKA  +  A  +L E+ +   +PN +T+++++    +        E    MK +G   
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F K      A +    M+ +GV+++    ++L+N   + GK+E A  L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +    G   D   +T LIDGL KAG++  A +   E M++     +   YN  ++ L  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR-NMLPDAVVYNVFINCLCM 566

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK   A +    M       D  TY++M+ + C+      A KLL     S ++     
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              +V GL  +G   +AK + +++  A  S
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 204/474 (43%), Gaps = 39/474 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +   CKA+ +++AE ++++     + P+VVT++ +I+ + +    D        M+E
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P+VVTY +LI G  +      +L++  +ML  G+  + +  +SL++ L Q GK +E
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+D     L+     +  +++GL K      A +  + L     +P+ V YN+ I 
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  G+ + A+  L E+ + G  P+  TY T++    R  +    L++L  MK      
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 251 DGFGYCTVIAAFVKIGRLKEAT-----------------------------------DYM 275
           +   Y T++A     G +++A                                    D  
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E M+  G+  DI  YNTL+ + C  G    A ++L+EM   G   D  T   LI G CK+
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            ++  A      M       N+  +N ++  L   G+I  A  V   ME      ++ TY
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +     K      A +L    +  G     S   A++     +G   +AK++
Sbjct: 803 DILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 165/387 (42%), Gaps = 1/387 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  V   C+  R  +A A+  +  ++G  P+ VTY  LID+  +        ++L  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  D+VTY +L+    +        D L   L   + P+  +Y  L+  L +    D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA +V  +M    ++P   TF+ ++NG  K    D A    R +++ G  P +VTY  LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K      A  +  ++   G   N     +++    +N K +  + +       G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G +  A  + ++++   +  D V YN  IN  C  GK + A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM   G + D+ T+  +I   C+ G    A   L  M       NL  YN +V  L  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
            G ++ A  +   M V   F+ SS+ H
Sbjct: 637 TGAVEKAKYLLNEM-VSAGFSPSSLTH 662



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 161/361 (44%), Gaps = 35/361 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   + ++A++ + +   +G+ PD  TYN +I ++C+         +L+ M+ 
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 71  AGISPDVVTYNSLIAG---------------------------ATRNSLLSCS------- 96
           + I P+++TYN+L+AG                             R  L +CS       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 97  -LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            LD+ + M+  G+  D+  YN+L+  L   G   +A  V ++M+   + P T TFN ++ 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+ + DNA   +  +      P + T+N L+ GL   GR+  A  +L E+  SG  P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  +     +       + +   M  KG+      Y  +I+ F K G + +A +  
Sbjct: 798 NNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M   GV     +Y+ L++ + +          L +M+++GF   K T + +     K 
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 336 G 336
           G
Sbjct: 918 G 918



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+  YN L+   C          +L  M  +GI+PD +T+N+LI G  ++S L  +
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNA 748

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                +ML   I P++ ++N+L+  L  +G+  EA  V  +M    L P   T++I+  G
Sbjct: 749 FATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATG 808

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K      A+R++  +   GFVP++ TYN LI    KAG +  A+ + K++   G  P 
Sbjct: 809 HGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPT 868

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           + TY  ++    R R      + L  MK KG++        +  AF K G   +A   ++
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928

Query: 277 QM 278
            +
Sbjct: 929 NL 930



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 96/202 (47%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   CK++ L+ A A     +   + P++ T+N L+             T+L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M ++G+ P+ +TY+ L  G  + S    ++ L  EM+  G  P V +YN+L+    + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  +F+DM    + P + T++I+++G  + R      +  + +++ GF P   T +
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 187 ILIKGLCKAGRLRTARWILKEL 208
            + +   K G    A+ +LK L
Sbjct: 909 FICRAFSKPGMTWQAQRLLKNL 930


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 26/429 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CK   ++ A++     ++ G++P V ++N+LI+  C   S      + + M 
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD VTYN L  G     ++S + +++ +ML+ G+ PDV +Y  L+    QLG  D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344

Query: 130 EANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
               + +DM+        + PC+    +ML+GLCK    D AL +F  ++  G  P+LV 
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLCK G+   A W+  E+ D    PN+ T+  ++    +         +L ++ 
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D   Y  VI  + K G ++EA +  + ++  G+   + ++N+LI  YCK   + 
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +LD ++  G      ++T L+D     GN K        M   G       Y+ I 
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580

Query: 365 DRLGKDGK---IDHAI--NVFE-------SMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
             L +  K    +H +   +FE        ME +    D  TY++++  LC+ K L S +
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL-SGA 639

Query: 409 KLLLSCLKS 417
            + L  +KS
Sbjct: 640 FVFLEIMKS 648



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 184/372 (49%), Gaps = 18/372 (4%)

Query: 56  VSFDAGYTILNRMREAGISPDVV---------TYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           VS  +  ++L   RE     DV          TY++++ G  R   L  ++  L      
Sbjct: 157 VSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 216

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
            I P V S+NS+M    +LG  D A   F  ++   L P   + NI++NGLC       A
Sbjct: 217 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 276

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 224
           L +   + KHG  P+ VTYNIL KG    G +  A  +++++ D G +P+ ITYT ++  
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 336

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV-IAAFVKIGRLKEATDYMEQMVTDGV 283
           +C   N    +GL +L  M  +G+  +    C+V ++   K GR+ EA     QM  DG+
Sbjct: 337 QCQLGN--IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+V+Y+ +I+  CK GK + A  L DEM  +    +  TH  L+ GLC+ G +  AR 
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLC 399
            L+ +   G   ++  YN ++D   K G I+ A+ +F    E+       T++S+++  C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514

Query: 400 KAKRLPSASKLL 411
           K + +  A K+L
Sbjct: 515 KTQNIAEARKIL 526



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 213/470 (45%), Gaps = 41/470 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            I +C  C+   ++    ++ D +  G  L  ++  ++++   C+    D   ++ N+M+
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+SPD+V Y+ +I G  +      +L L DEM +  I P+  ++ +L+  L Q G   
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +   +I    T     +NI+++G  K+   + AL +F+ + + G  P + T+N LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK   +  AR IL  +   G AP+ ++YTT+M         K   E+   MK +G  
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQ------------MVTDGVQLDIVSYNTLINLY 297
                Y  +     +  + +     + +            M ++G+  D ++YNT+I   
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 630

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C+   L  A++ L+ M+ +  +    T+ ILID LC  G I+ A   +  + +     + 
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            AY  ++      G  + A+ +F  +        ++D   YS++++ LC+        + 
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD---YSAVINRLCR--------RH 739

Query: 411 LLSCL---KSGVRILKSAQKAVVD-GLRHSGCRREAKKIQSKIRMAKISH 456
           L++C     +GV  L S +++ V   +  + CRR    ++      K+SH
Sbjct: 740 LMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTLSVE------KLSH 783



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 14/268 (5%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L NI +  + K+  +E+A  +    I  G+ P V T+N LI  YC+  +      I
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLF 123
           L+ ++  G++P VV+Y +L+  A  N   + S+D L  EM   GIPP   +Y+ +   L 
Sbjct: 526 LDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 584

Query: 124 QLGKPDEAN-----RVFQ-------DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           +  K +  N     R+F+       DM    + P   T+N ++  LC+ ++   A     
Sbjct: 585 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++         TYNILI  LC  G +R A   +  L +   + +   YTT++K      
Sbjct: 645 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVI 259
             ++ +++   +  +G+      Y  VI
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 219
           R  D++L + + ++         +YN ++    +  ++    W + KE+ D     N  T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 189

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R +K +  +  L   + K        + ++++ + K+G +  A  +   ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 323
             G+   + S+N LIN  C  G +  A  L  +M K G E D                  
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 324 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 363
                              T+TIL+ G C+ GNI    + L+ M   GF+ N +   + +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K G+ID A+++F  M+      D   YS ++H LCK  +   A  L L       
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 427

Query: 420 RILKSAQK--AVVDGLRHSGCRREAKKI 445
           RIL +++   A++ GL   G   EA+ +
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSL 455


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 208/427 (48%), Gaps = 16/427 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVL----PDVVTYNMLIDAYCQFVSFDAGYTILN 66
           N+ +   CK  ++++A    +D  R   L    PDV TY+ L++  C+    D    +L+
Sbjct: 202 NLIIKALCKLGQIDRA----VDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 257

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G  P+ VT+N LI   ++N  LS +  L+D M   G  P+  +YN+L+H L   G
Sbjct: 258 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 317

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K D+A  + + M+     P   T+  ++NGL K R  ++ + +   +++ G       Y+
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 377

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL K G+   A  + KE+ + G  PN + Y   +    R+ K     +IL  M  K
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G+  + F Y +++  F K G  ++A    ++M++  ++ ++V  + L+N  C+ G+L  A
Sbjct: 438 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 497

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYM-NKIGFDSNLEAYNCIV 364
             +   M  +G + D   ++ +I GLC  G++ KG +L  E    +     ++  YN + 
Sbjct: 498 LTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILF 557

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           + L +   +  AI++  SM  +    DS T +  +  L +    P   +L L  L   VR
Sbjct: 558 NALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV--VR 615

Query: 421 ILKSAQK 427
           +LK  +K
Sbjct: 616 LLKRERK 622



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 6/388 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+++TYN++I A C+    D        M     +PDV TY++L+ G  +   +  +
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LLDEM   G  P+  ++N L+  L + G    A ++  +M      P   T+N +++G
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     D AL +   +     VP  VTY  +I GL K  R      IL  + + G   N
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y++++   F+  K +  + +   M  KG   +   Y   I    +  +  EA D ++
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M++ G   +  +Y++L+  + K+G  + A L+  EM  Q    +    ++L++GLC++G
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK------DSFT 390
            ++ A     +M   G   ++ AY+ ++  L   G +D  + +F  M+ +      D  T
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           Y+ + + LC+   L  A  LL S L  G
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEG 580



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 12/339 (3%)

Query: 128 PDEANRVFQDMICGDLTPCTAT---FNIMLNGLCKNRYTDNALRMFR---GLQKHGFVPE 181
           P EA   F  M   DL  C  T   FN +LN + +      A + +    G    GF P 
Sbjct: 140 PGEAVNFFHRM-ANDLH-CKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPN 197

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYN++IK LCK G++  A    +E+      P+  TY+T+M    + R+    + +L 
Sbjct: 198 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 257

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M+ +G   +   +  +I A  K G L  A   ++ M   G   + V+YNTLI+  C +G
Sbjct: 258 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 317

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           KL+ A  LL++M       ++ T+  +I+GL K    +     L  M + G  +N   Y+
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 377

Query: 362 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L K+GK ++A+ +++ M  K    +   Y + +  LC+ ++   A  +L   L  
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           G         +++ G    G  ++A  +  ++    + H
Sbjct: 438 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH 476



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 21/196 (10%)

Query: 11  NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           N+  C+      C++ RL +A  +    +  G+ PDVV Y+ +I   C   S D G  + 
Sbjct: 477 NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 536

Query: 66  NRMR--EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
             M+  E    PDVVTYN L     R   L+ ++DLL+ ML+ G  PD  + N  +  L 
Sbjct: 537 YEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLR 596

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           +   P +  R+F D               ++  L K     +ALR+   +      PE  
Sbjct: 597 ERINPPQDGRLFLDE--------------LVVRLLKRERKLSALRIVEEMLLRFLPPEPS 642

Query: 184 TYNILIKGLCKAGRLR 199
           T++ +I+  CK  R+R
Sbjct: 643 TWSRVIQRTCKPKRIR 658


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 185/380 (48%), Gaps = 5/380 (1%)

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P    +++L +      ++  ++    +M    + P   S N L+H   +LGK D   R 
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           F+DMI     P   T+NIM++ +CK    + A  +F  ++  G +P+ VTYN +I G  K
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            GRL       +E+ D    P+ ITY  ++ C  +  K   GLE    MKR G   +   
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y T++ AF K G +++A  +   M   G+  +  +Y +LI+ YCK G L  A+ L +EM 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           + G E +  T+T LIDGLC   N       L+ M ++     +  +  ++D L K+  + 
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 375 HAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
            AI+ F  +        ++  Y++M+  LCK  ++ +A+ L     + G+   ++A  ++
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 430 VDGLRHSGCRREAKKIQSKI 449
           +DG    G   EA  ++ K+
Sbjct: 383 MDGNFKQGNVLEALALRDKM 402



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 181/380 (47%), Gaps = 5/380 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           TR  N  +  F K  + +  +    D I  G  P V TYN++ID  C+    +A   +  
Sbjct: 60  TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFE 119

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+  G+ PD VTYNS+I G  +   L  ++   +EM +M   PDV +YN+L++C  + G
Sbjct: 120 EMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 179

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +    F++M    L P   +++ +++  CK      A++ +  +++ G VP   TY 
Sbjct: 180 KLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 239

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMK 244
            LI   CK G L  A  +  E+   G   N +TYT ++   C + N     GL +L  M 
Sbjct: 240 SLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTE--GLHLLDEMV 297

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKL 303
                     +C +I    K   + +A DY  ++  D G+Q +   Y  +I+  CK  ++
Sbjct: 298 ELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQV 357

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           EAA  L ++M ++G   D+  +T L+DG  K GN+  A    + M + G   +L AY  +
Sbjct: 358 EAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSL 417

Query: 364 VDRLGKDGKIDHAINVFESM 383
           V  L    ++  A +  E M
Sbjct: 418 VWGLSHCNQLQKARSFLEEM 437



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 182/419 (43%), Gaps = 46/419 (10%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R  V P   + N L+  + +    D        M  AG  P V TYN +I    +   + 
Sbjct: 53  RFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVE 112

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L +EM   G+ PD  +YNS++    ++G+ D+    F++M      P   T+N ++
Sbjct: 113 AARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 172

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           N  CK       L  FR ++++G  P +V+Y+ L+   CK G ++ A     ++   G  
Sbjct: 173 NCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 232

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  TYT++                                   I A+ KIG L +A   
Sbjct: 233 PNEYTYTSL-----------------------------------IDAYCKIGNLSDAFRL 257

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M+  GV+ ++V+Y  LI+  C          LLDEM +   +    T  +LIDGLCK
Sbjct: 258 ANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK 317

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEA----YNCIVDRLGKDGKIDHAINVFESME----VK 386
              +  A   ++Y  +I  D  L+A    Y  ++D L K  +++ A  +FE M     V 
Sbjct: 318 NKLVSKA---IDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVP 374

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           D   Y+S++    K   +  A  L    +++G+++   A  ++V GL H    ++A+  
Sbjct: 375 DRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSF 433



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 1/279 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  +L K      +  R G+ P+VV+Y+ L+DA+C+             MR 
Sbjct: 169 NALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 228

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+  TY SLI    +   LS +  L +EML++G+  +V +Y +L+  L     P E
Sbjct: 229 VGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTE 288

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILI 189
              +  +M+  D+     TF ++++GLCKN+    A+  F R     G       Y  +I
Sbjct: 289 GLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMI 348

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            GLCK  ++  A  + +++   G  P+   YT++M   F+       L +   M   G  
Sbjct: 349 DGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMK 408

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
            D   Y +++       +L++A  ++E+M+ +G+  D V
Sbjct: 409 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 447



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)

Query: 252 GFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           GFG +  + +  + +G ++EA     +M    V     S N L++ + K GK +      
Sbjct: 24  GFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF 83

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M   G +   +T+ I+ID +CK G+++ AR   E M   G   +   YN ++D  GK 
Sbjct: 84  KDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKV 143

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G++D  +  FE M+      D  TY+++++  CK  +LP   +      ++G++    + 
Sbjct: 144 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSY 203

Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
             +VD     G  ++A K    +R
Sbjct: 204 STLVDAFCKEGMMQQAIKFYVDMR 227


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 4/409 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K+   + +  +  + +   L KA  +    ++ G+ P+VVTY++LI+  C+         
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +  ++ + G+ P V+TY+SLI G  ++  L     L   ML  G  PDV   + L++ L 
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  DEA R F   +   LT     FN +++G  + + T + L+M+  +  +  +P++V
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +L+KGL + GRL  A  +  +L   G +P+ I Y T++    + R    GL+I   M
Sbjct: 522 TYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLM 581

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           +  G   D   Y  +I  F + G ++   + + +++  G++ DIV+YNT+I  YC     
Sbjct: 582 QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIF 641

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L + ++    + +  T TILID  CK G +  A L    M + G + N+  Y+C+
Sbjct: 642 SKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCL 701

Query: 364 VDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSAS 408
           +D   K    + A  ++E M       +  +YS ++  LCK   +  AS
Sbjct: 702 IDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEAS 750



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 5/405 (1%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C  N++  A       +R G  P++VT++ LI+ YC+ +  D  +++ N M E GI PD+
Sbjct: 251 CMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           V Y+ LI G  R   L     L    L  G+  DV  ++S+M    ++G   +A  V+  
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   ++P   T++I++NGLC+N     A  +F  + K G  P ++TY+ LI G CK+  
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           LR    +   +   GH P+ +  + ++    R       L       ++G T + + +  
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I    ++ R ++       M    V  D+V+Y  L+    ++G+L+ A  L  ++ K+G
Sbjct: 491 LIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKG 550

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
           F  D   +  LIDG CK  +        + M   G   ++  YN +++   ++G +++ +
Sbjct: 551 FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVL 610

Query: 378 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +   +       D  TY++M+   C  K    A K L   LK G
Sbjct: 611 ELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK-LFEVLKCG 654



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 167/362 (46%), Gaps = 9/362 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P  V Y+ L+  YC+    D        M + G+S      + ++     +  +   
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 97  LDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           L+  +EM + +G+      Y  + +   + G+ ++     + ++   L P     N +L 
Sbjct: 195 LENYEEMCKGLGV------YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILK 248

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC       A   F  + + G  P LVT++ LI   CK  RL  A  +   + + G  P
Sbjct: 249 GLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVP 308

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + + Y+ ++   FR  K + G  + S    +G   D   + +++ A+V++G L +A +  
Sbjct: 309 DLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            +M+ +G+  ++V+Y+ LIN  C+ G++  A  +  ++ KQG E    T++ LIDG CK+
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMV 395
            N++        M + G   ++   + +++ L + G +D A+  F    VK   T ++ +
Sbjct: 429 ENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF-FQAVKRGLTLNNYL 487

Query: 396 HN 397
            N
Sbjct: 488 FN 489



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 167/379 (44%), Gaps = 7/379 (1%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
            Y  + +++ +    + G      + E G+ P +V  N ++ G    + +  + D  D M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 104 LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
           +  G  P++ ++++L++   +  + DEA  ++  MI   + P    ++I++NGL +    
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKL 326

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           +    +F      G   ++V ++ ++    + G L  A  +   +   G +PN +TY+ +
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           +    RN +      +   + ++G       Y ++I  F K   L++       M+  G 
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK-GAR 342
             D+V  + LIN   ++G ++ A     +  K+G   + Y    LIDG  +    + G +
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLK 506

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
           +++  M       ++  Y  +V  L + G++D A+ +F  +  K    D   Y +++   
Sbjct: 507 MYI-LMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 399 CKAKRLPSASKLLLSCLKS 417
           CK KR P+    +   ++S
Sbjct: 566 CK-KRDPATGLQIFKLMQS 583



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 112/224 (50%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +  F +   +E    ++ + I+ G+ PD+VTYN +I  YC    F     +   +
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +     P+ +T+  LI    ++  +  ++ +   MLE G  P++ +Y+ L+   F+    
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           + A  +++ M+   ++P   +++I+++GLCK    + A   F+       +P+++ Y IL
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGIL 771

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
           I+G CK GRL  A  +   +  +G  P+ +    + +  F++ +
Sbjct: 772 IRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQ 815



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 154/361 (42%), Gaps = 39/361 (10%)

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDL---------------TPCTA 148
           +G+   V S+  + H L +    D A RVF  M+   G+L                P T 
Sbjct: 83  LGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPST- 141

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR----LRTARWI 204
            ++ +L+  C+N   D A+  F  + K G        + ++  L  + R    L     +
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            K LG          Y  +     +  + + GL    A+  +G          ++     
Sbjct: 202 CKGLG---------VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCM 252

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
             ++  A+D+ + MV  G   ++V+++TLIN+YCKE +L+ A+ L + M ++G   D   
Sbjct: 253 GNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           ++ILI+GL +AG ++            G   ++  ++ I+D   + G +  AI V+  M 
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 385 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
            +    +  TYS +++ LC+  R+  A  +    LK G+        +++DG     C+ 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF----CKS 428

Query: 441 E 441
           E
Sbjct: 429 E 429



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 36/182 (19%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM- 68
             I +  +CK  R++ A  I    +  G  P+++TY+ LID Y +  + ++ + +  +M 
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 69  ------------------------REAGIS----------PDVVTYNSLIAGATRNSLLS 94
                                    EA ++          PDV+ Y  LI G  +   L+
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLA 782

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIM 153
            ++ L D ML  GI PD     +L    FQ  +    + VF +     L  P ++  +I+
Sbjct: 783 EAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPESPLNLLVCPVSSMGDIL 842

Query: 154 LN 155
            N
Sbjct: 843 QN 844


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 156/287 (54%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   M 
Sbjct: 145 FNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMH 204

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN++F +M+   L P + TF  +++G CKN + D
Sbjct: 205 ASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVD 264

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +     +P+LVTYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 265 LAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLI 324

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 325 DGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 385 PDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 1/298 (0%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+ + G  PN++T+
Sbjct: 191 GDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTF 250

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N    L +EI   M  +    D   Y  +I    K G LK+A D +++M  
Sbjct: 251 TTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSM 310

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D ++Y TLI+  CKEG L+ A+     M ++    D   +T LI GLC+ G    
Sbjct: 311 XGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    +   +  +  + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M    + P   T+++++NGLCK    D+A ++F  + + G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKG 242

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK G +  A  I K++      P+ +TY  ++    +    K   
Sbjct: 243 LVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAH 302

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +++  M   G   D   Y T+I    K G L  A ++ + M+ + ++LD V+Y  LI+  
Sbjct: 303 DLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGL 362

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 422 VVTYNVLMN 430



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 14/319 (4%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVF----QDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           D++ ++ L+    +LG   +A   +    +   C     C      +L  L K +Y    
Sbjct: 71  DIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRK----VLEHLMKLKYFKLV 126

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
              +  + + G+   L  +NIL+   CK G +R A+ +   +   G  P+ ++Y T+M  
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 186

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             R      G  + SAM   G   D + Y  +I    K  ++ +A    ++M+  G+  +
Sbjct: 187 YIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPN 246

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
            V++ TLI+ +CK G ++ A  +  +M  Q    D  T+  LI GLCK G++K A   ++
Sbjct: 247 SVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLID 306

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKA 401
            M+  G   +   Y  ++D   K+G +D A       + E++ + D   Y++++  LC+ 
Sbjct: 307 EMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRL-DDVAYTALISGLCQE 365

Query: 402 KRLPSASKLLLSCLKSGVR 420
            R   A K+L   L  G++
Sbjct: 366 GRSVDAEKMLREMLSVGLK 384



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 91/174 (52%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK   ++ A  I    +   +LPD+VTYN LI   C+       + +++ M   G+ PD 
Sbjct: 258 CKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDK 317

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P T T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 378 MLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 71/146 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD +TY  LID  C+    D  +     M +
Sbjct: 286 NALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQ 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD  +Y  +++   + G   +
Sbjct: 346 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWK 405

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 9/200 (4%)

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           LE     +   Y F G     +I A++++G L++A D           +   +   ++  
Sbjct: 62  LETKGTQRSDIYVFSG-----LITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEH 116

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
             K    +  +   +E+ + G+    Y   IL+   CK G+I+ A+   + + K G   +
Sbjct: 117 LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPS 176

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
           + +YN +++   + G +D    +  +M       D +TYS +++ LCK  ++  A+KL  
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFD 236

Query: 413 SCLKSGVRILKSAQKAVVDG 432
             L+ G+         ++DG
Sbjct: 237 EMLEKGLVPNSVTFTTLIDG 256


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 186/371 (50%), Gaps = 4/371 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+  + NI +  FCK   +  A+ +  +  +  + P VV++N LI+ YC+  + D G+ +
Sbjct: 238 LNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRL 297

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M ++   PDV TY++LI    + + +  +  L  EM E G+ P+   + +L+H   +
Sbjct: 298 KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSR 357

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+ D     +Q M+   L P    +N ++NG CKN     A  +  G+ + G  P+ VT
Sbjct: 358 NGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVT 417

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI G C+ G + TA  I KE+  +G   + + ++ ++    +  +       L  M 
Sbjct: 418 YTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREML 477

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           R G   D   Y  ++ AF K G  +     +++M +DG   ++V+YN L+N  CK G+++
Sbjct: 478 RAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMK 537

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A +LLD M   G   D  T+  L++G  +  N   A  H +   +IG  ++L +Y  +V
Sbjct: 538 NADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASKHYKQKPEIGIVADLASYKSLV 594

Query: 365 DRLGKDGKIDH 375
           + L +  K DH
Sbjct: 595 NELYRASK-DH 604



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 183/364 (50%), Gaps = 1/364 (0%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           +V  +N+L++ +C+  +      + + + +  + P VV++N+LI G  +   L     L 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M +    PDV++Y++L++ L +  K D A+R+F +M    L P    F  +++G  +N
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D     ++ +   G  P++V YN L+ G CK G L  AR I+  +   G  P+ +TY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    R       LEI   M + G   D  G+  +I    K GR+ +A   + +M+ 
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D V+Y  +++ +CK+G  +  + LL EM+  G   +  T+ +L++GLCK G +K 
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID-HAINVFESMEVKDSFTYSSMVHNLC 399
           A + L+ M  +G   +   YN +++   +      H     E   V D  +Y S+V+ L 
Sbjct: 539 ADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEIGIVADLASYKSLVNELY 598

Query: 400 KAKR 403
           +A +
Sbjct: 599 RASK 602



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 200/424 (47%), Gaps = 24/424 (5%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIA 85
            +A++I  + LG +PDV+    L   +   V       +L+RM +  ++P    +   + 
Sbjct: 173 VDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMK--LNPTGTVWGFYM- 229

Query: 86  GATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP 145
                           E+L+ G P +V+ +N LM+   + G   +A +VF ++    L P
Sbjct: 230 ----------------EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRP 273

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              +FN ++NG CK    D   R+   ++K    P++ TY+ LI  LCK  ++  A  + 
Sbjct: 274 TVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLF 333

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
            E+ + G  PN + +TT++    RN +  L  E    M  KG   D   Y T++  F K 
Sbjct: 334 YEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN 393

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           G L  A + ++ M+  G++ D V+Y TLI+ +C+ G ++ A  +  EM++ G E D+   
Sbjct: 394 GDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGF 453

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 384
           + LI G+CK G +  A   L  M + G   +   Y  ++D   K G       + + M+ 
Sbjct: 454 SALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS 513

Query: 385 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG-LRHSGCRR 440
              + +  TY+ +++ LCK  ++ +A  LL + L  GV         +++G  RH+   +
Sbjct: 514 DGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573

Query: 441 EAKK 444
             K+
Sbjct: 574 HYKQ 577



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           +EIL A    G+  + + +  ++  F K G + +A    +++    ++  +VS+NTLIN 
Sbjct: 229 MEILDA----GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLING 284

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           YCK G L+  + L   MEK     D +T++ LI+ LCK   + GA      M + G   N
Sbjct: 285 YCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPN 344

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 412
              +  ++    ++G+ID     ++ M  K    D   Y+++V+  CK   L +A  ++ 
Sbjct: 345 DVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             ++ G+R  K     ++DG    G    A +I+ ++
Sbjct: 405 GMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEM 441


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 205/489 (41%), Gaps = 75/489 (15%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE--AGISPDV 77
           A R +   A+  + ++L + P +VTYN L+D++ +    D    +L  M     G   + 
Sbjct: 221 AARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLND 280

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEM-------------------------------LEM 106
           VTYN +I+   R   L  +  L+D M                               +EM
Sbjct: 281 VTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEM 340

Query: 107 ---GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
              GI P + +YN+++H L +  + + A   F +M    L P   T+N MLNG CK    
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
             AL +   L++ G  P ++TYN LI G C+ G L  AR + +E+ + G  P+  TYT +
Sbjct: 401 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTIL 460

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT-------------------------- 257
           M    + R   +  E    M  KG   D F Y T                          
Sbjct: 461 MNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGI 520

Query: 258 ---------VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                    +I    K G LK+A D   +MV+DG+Q D ++Y  LI+ +C+ G L  A  
Sbjct: 521 YPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARK 580

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL+ M   G +    T+TILI   C+ GN+  A      M  +G + N   YN ++  L 
Sbjct: 581 LLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 640

Query: 369 KDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + G+   A + F  M       + +TY+ ++   C+      A +L     ++G+     
Sbjct: 641 RTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYC 700

Query: 425 AQKAVVDGL 433
              A+  G 
Sbjct: 701 THNALFKGF 709



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 196/416 (47%), Gaps = 38/416 (9%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K S+   N  +    +   ++K EA+ ++    G++P +VTYN +I    +    +A   
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
               MR  G+ PD++TYNS++ G  +   L  +L LL ++   G+ P V +YN+L+    
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQK--- 175
           +LG  +EA R+ ++M+     P   T+ I++NG  K R    A   F     +GLQ    
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 176 ---------------------------HGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
                                       G  P+ VTYN++I GLCK G L+ A+ +  ++
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  P+ ITYT ++             ++L+ M   G       Y  +I    + G L
Sbjct: 551 VSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNL 610

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
             A  +  +M+  G++ + ++YN LI+  C+ G+   AY    EM ++G   +KYT+T+L
Sbjct: 611 YSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLL 670

Query: 329 IDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           IDG C+ GN   A RL+ E M++ G   +   +N +     K G + HAI   E++
Sbjct: 671 IDGNCREGNWADAIRLYFE-MHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYLENI 724



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 7/355 (1%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G++PDV   N ++      +       +  EML++ I P + +YN+L+    + G+ DEA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 132 NRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           + + ++M    G       T+N++++ L +  + +NA ++   ++         TYN LI
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF-TYNPLI 321

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L + G ++    +  E+ + G  P  +TY  I+    ++ + +      + M+  G  
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y +++  + K G LKEA   +  +   G+   +++YNTLI+ YC+ G LE A  L
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +EM +QG   D  T+TIL++G  K  N+  AR   + M   G   +  AYN  +     
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI 501

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            G    A  + E M +K    D+ TY+ ++  LCK   L  A  L +  +  G++
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ 556



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 120/275 (43%), Gaps = 12/275 (4%)

Query: 14  VCTFC-------KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           VCT+        K   L  A     + +  G+ PD   YN  I A          + +  
Sbjct: 454 VCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLRE 513

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   GI PD VTYN +I G  +   L  + DL  +M+  G+ PD  +Y  L+H   + G
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA ++   M+   L P   T+ I+++  C+     +A   FR +   G  P  +TYN
Sbjct: 574 LLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 633

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +LI  LC+ GR   A     E+ + G APN  TYT ++    R   +   + +   M + 
Sbjct: 634 VLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 693

Query: 247 GYTFDGFGYCTVIAAFVKI--GRLKEATDYMEQMV 279
           G   D   YCT  A F     G +  A +Y+E +V
Sbjct: 694 GIPPD---YCTHNALFKGFDKGHMYHAIEYLENIV 725



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 7/293 (2%)

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ + C  + P     N +L  L      D+   ++R + +    P +VTYN L+    
Sbjct: 195 AFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFL 254

Query: 194 KAGRLRTARWILKELGDSGHA--PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           K GR   A  +LKE+   G     N +TY  ++    R    +   +++ +M R      
Sbjct: 255 KEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKAS 313

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
            F Y  +I A ++ G +++      +M  +G+   +V+YN +I+   K  ++EAA L   
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G   D  T+  +++G CKAGN+K A   L  + + G    +  YN ++D   + G
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 372 KIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            ++ A  + E M  +  F    TY+ +++   K + LP A +     L  G++
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQ 486



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 44/290 (15%)

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
           L  FR +  HG  P++   N +++ L  A R    R + +E+      P  +TY T++  
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLD- 251

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG--VQ 284
                                             +F+K GR  EA+  +++M T G    
Sbjct: 252 ----------------------------------SFLKEGRKDEASMLLKEMETQGGGCL 277

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-L 343
           L+ V+YN +I+   +EG LE A  L+D M +   +   +T+  LI  L + G ++    L
Sbjct: 278 LNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEAL 336

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
            +E  N+ G    L  YN I+  L K  +++ A   F  M     + D  TY+SM++  C
Sbjct: 337 QMEMENE-GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYC 395

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           KA  L  A  LL    ++G+         ++DG    G   EA++++ ++
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEM 445


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 155/287 (54%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN++F +M+   L P   TF  +++G CKN   D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVD 264

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +     +P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A ++F  +    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKA 242

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++      P+ ITY T++    +    K   
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAN 302

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +++  M  KG   D   Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  
Sbjct: 303 DLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 422 VVTYNVLMN 430



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 1/298 (0%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+      PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +    D   Y T+I    K G LK+A D +++M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSM 310

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+Q D ++Y TLI+  CKEG L+ A+     M ++    D   +T LI GLC+ G    
Sbjct: 311 KGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 110/214 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK N+++ A  +  + +   ++P+ VT+  LID +C+    D    I  +M  
Sbjct: 216 SVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD++TYN+LI G  +   L  + DL+DEM   G+ PD  +Y +L+    + G  D 
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDT 335

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + MI  ++      +  +++GLC+   + +A +M R +   G  P+  TY ++I 
Sbjct: 336 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 395

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
             CK G +     +LKE+   GH P+ +TY  +M
Sbjct: 396 EFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDAN 232

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              ++M+   +  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 293 CKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 352

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 90/174 (51%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   +LPD++TYN LI   C+         +++ M   G+ PD 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDK 317

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P   T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 72/146 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD +TY  LID  C+    D  +    RM +
Sbjct: 286 NTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQ 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD  +Y  +++   + G   +
Sbjct: 346 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 200/429 (46%), Gaps = 30/429 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P+   +N L+ AYC+   +   Y +  +M + G  P  + YN  I     N  L  S
Sbjct: 337 GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGS 396

Query: 97  LDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
            DLL+       EML++G+  +  + ++   CL   GK D+A  +  +M+     P  +T
Sbjct: 397 -DLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDST 455

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           ++ ++  LC     + A  +F  ++K+G VP + TY ILI   CKAG ++ AR    E+ 
Sbjct: 456 YSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEML 515

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
                PN +TYT+++    + RK     ++   M  +G   +   Y  +I    K G++ 
Sbjct: 516 RDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQID 575

Query: 270 EATDYMEQMVTDGVQLD----------------IVSYNTLINLYCKEGKLEAAYLLLDEM 313
           +A     +M  D    D                I++Y  L++  CK  ++E A+ LLD M
Sbjct: 576 KACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTM 635

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
              G E ++  +  LIDG CK G ++ A+     M++ G+  NL  Y+ +++ L K+ ++
Sbjct: 636 SVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRL 695

Query: 374 DHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           D  + V   M +++S T     Y+ M+  LCK  +   A +L+L   + G         A
Sbjct: 696 DLVLKVLSKM-LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTA 754

Query: 429 VVDGLRHSG 437
           ++DG    G
Sbjct: 755 MIDGFGKIG 763



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 225/491 (45%), Gaps = 61/491 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A+++EKA  +  +  + G++P V TY +LID++C+           + M     +P+
Sbjct: 463 LCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPN 522

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
           VVTY SLI    +   +  +  L + ML  G  P+V +Y +L+  HC  + G+ D+A ++
Sbjct: 523 VVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHC--KAGQIDKACQI 580

Query: 135 FQDMICGDL-----------------TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           +  M  GD+                 TP   T+  +++GLCK    + A  +   +  +G
Sbjct: 581 YARMQ-GDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNG 639

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
             P  + Y+ LI G CK G+L  A+ +  ++ + G+ PN  TY++++   F+ ++  L L
Sbjct: 640 CEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVL 699

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++LS M     T +   Y  +I    K+G+ +EA   M +M   G   ++++Y  +I+ +
Sbjct: 700 KVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGF 759

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR--------------- 342
            K GK+E    L  +M  +G   +  T+ +LI+  C  G +  A                
Sbjct: 760 GKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHI 819

Query: 343 ---------LHLEYMNKIGFDSNLEA---------YNCIVDRLGKDGKIDHAINVFE--- 381
                     + E++  IG    L           Y  ++D   K G+++ A+N+ E   
Sbjct: 820 SSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEIS 879

Query: 382 ---SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
              S+ V + + Y+S++ +L  A ++  A +L  S +   V    S    ++ GL   G 
Sbjct: 880 SSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGK 939

Query: 439 RREAKKIQSKI 449
            +EA ++   I
Sbjct: 940 WQEALQLSDSI 950



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 177/384 (46%), Gaps = 16/384 (4%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C A + +KA  II + +  G +PD  TY+ +I   C     +  + +   M++ GI P 
Sbjct: 428 LCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPS 487

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +  L+  + +  DEML     P+V +Y SL+H   +  K  +AN++F+
Sbjct: 488 VYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFE 547

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ----------------KHGFVP 180
            M+     P   T+  +++G CK    D A +++  +Q                     P
Sbjct: 548 MMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETP 607

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            ++TY  L+ GLCKA R+  A  +L  +  +G  PN I Y  ++    +  K +   E+ 
Sbjct: 608 NIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVF 667

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M  +GY  + + Y ++I +  K  RL      + +M+ +    ++V Y  +I+  CK 
Sbjct: 668 VKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKV 727

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK E AY L+ +ME+ G   +  T+T +IDG  K G I+        M   G   N   Y
Sbjct: 728 GKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITY 787

Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
             +++     G +D A  + + M+
Sbjct: 788 RVLINHCCSTGLLDEAHRLLDEMK 811



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 218/496 (43%), Gaps = 64/496 (12%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           + CKA R   A +++    +   +PD V YN ++   C+   F     IL+RMR     P
Sbjct: 249 SLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTY  L++G      L     +L  M+  G  P+   +NSL+H   +      A ++F
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNR--------------YT------------------ 163
           + MI     P    +NI +  +C N               Y+                  
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425

Query: 164 ---------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
                    D A  +   +   GFVP+  TY+ +I  LC A ++  A  + +E+  +G  
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TYT ++    +    +        M R   T +   Y ++I A++K  ++ +A   
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK--QGFECDKY--------- 323
            E M+ +G + ++V+Y  LI+ +CK G+++ A  +   M+   +  + D Y         
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE 605

Query: 324 -----THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
                T+  L+DGLCKA  ++ A   L+ M+  G + N   Y+ ++D   K GK+++A  
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQE 665

Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
           VF  M  +    + +TYSS++++L K KRL    K+L   L++           ++DGL 
Sbjct: 666 VFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725

Query: 435 HSGCRREAKKIQSKIR 450
             G   EA ++  K+ 
Sbjct: 726 KVGKTEEAYRLMLKME 741



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 194/429 (45%), Gaps = 26/429 (6%)

Query: 9   LLNICVCTFCK------ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           L NI + + C       ++ LE AE    + + LGV+ + V  +      C    FD  +
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            I+  M   G  PD  TY+ +I      S +  +  L +EM + GI P V++Y  L+   
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSF 498

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G   +A   F +M+  + TP   T+  +++   K R   +A ++F  +   G  P +
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNV 558

Query: 183 VTYNILIKGLCKAGRLRTARWILKEL-GD---------------SGHAPNAITYTTIMKC 226
           VTY  LI G CKAG++  A  I   + GD                   PN ITY  ++  
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDG 618

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             +  + +   E+L  M   G   +   Y  +I  F K G+L+ A +   +M   G   +
Sbjct: 619 LCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPN 678

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           + +Y++LIN   KE +L+    +L +M +     +   +T +IDGLCK G  + A   + 
Sbjct: 679 LYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLML 738

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M ++G   N+  Y  ++D  GK GKI+  + ++  M  K    +  TY  ++++ C   
Sbjct: 739 KMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTG 798

Query: 403 RLPSASKLL 411
            L  A +LL
Sbjct: 799 LLDEAHRLL 807



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 187/417 (44%), Gaps = 17/417 (4%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           N LI   C+   ++     L R+++ G      TYN+LI    R   L  +  +  EM  
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
            G   D  +     + L + G+  +A  + +     +  P T  +N M++GLC+      
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQE 290

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A+ +   ++    +P +VTY IL+ G    G+L   + IL  +   G  PN   + +++ 
Sbjct: 291 AMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVH 350

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME-------QM 278
              ++R Y    ++   M + G       Y   I +      L   +D +E       +M
Sbjct: 351 AYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELP-GSDLLELAEKAYSEM 409

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  GV L+ V+ +      C  GK + A+ ++ EM  +GF  D  T++ +I  LC A  +
Sbjct: 410 LDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKV 469

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS-----FTYSS 393
           + A L  E M K G   ++  Y  ++D   K G I  A N F+ M ++D+      TY+S
Sbjct: 470 EKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM-LRDNCTPNVVTYTS 528

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           ++H   KA+++  A+KL    L  G +       A++DG   +G   +A +I ++++
Sbjct: 529 LIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 39/314 (12%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  +LE A+ + +     G  P++ TY+ LI++  +    D    +L++M E   +P+
Sbjct: 654 FCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPN 713

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VV Y  +I G  +      +  L+ +M E+G  P+V +Y +++    ++GK ++   +++
Sbjct: 714 VVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYR 773

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--------------HGFVPEL 182
           DM      P   T+ +++N  C     D A R+   +++               GF  E 
Sbjct: 774 DMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREF 833

Query: 183 VT-------------------YNILIKGLCKAGRLRTARWILKELGDSGH--APNAITYT 221
           +T                   Y ILI    KAGRL  A  +L+E+  S      N   YT
Sbjct: 834 ITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYT 893

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---TDYMEQM 278
           ++++      K     E+ ++M  K    +   +  +I    ++G+ +EA   +D + QM
Sbjct: 894 SLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQM 953

Query: 279 VTDGVQLDIVSYNT 292
           V   V  + V+Y T
Sbjct: 954 VCH-VCSNFVNYKT 966



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 27/230 (11%)

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKG--LCKAGRLRTARWILKELGDSGHAPNAITY 220
           T N LR FRG      V E++    L+K    C    L    W  +++G S H P     
Sbjct: 87  TQNFLRQFRGRLSEPLVVEVMN---LVKHPEFCVEFFL----WASRQIGYS-HTPVVYNA 138

Query: 221 TTIMKCCFRNRKYKLGLEILSAMK-------RKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
              + CC      ++  + L  ++       RK   F       +I    + G    A +
Sbjct: 139 LIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF-------LIQKCCRNGMWNVALE 191

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            + ++   G +    +YN LI ++ +  KL+ A+L+  EM   GF  D  T       LC
Sbjct: 192 ELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLC 251

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           KAG    A   L  + K  F  +   YN +V  L +      A+++ + M
Sbjct: 252 KAGRCGDA---LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM 298


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 202/412 (49%), Gaps = 2/412 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   C A R+  A  +I   ++ G LPD ++Y  ++   C+         +L RM +
Sbjct: 235 NCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSD 294

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AGI PD VTYN LI G  ++     +L  L E        D   Y++ +H     G+  E
Sbjct: 295 AGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAE 354

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +  +MI     P   T++ +++G C+    D A +M + + K+G  P  VT+  L+ 
Sbjct: 355 AKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLN 414

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK G+   A  +L +  +    P+AITY+ +M    R  K K   +++  M +KG+  
Sbjct: 415 GLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFP 474

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
                  +I A     +  +A D+MEQ  + G  +++V++ T+I+ + ++G LE+A  LL
Sbjct: 475 TTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLL 534

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D+M       D  T+T+++D L + G +K A   +E M   G       Y  ++ R  + 
Sbjct: 535 DDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEK 594

Query: 371 GKIDHAINVFESMEVKDSFT--YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           G ++  +N+ + M  K+ F+  Y+ ++  LC   +L  A+ LL   L++  +
Sbjct: 595 GAVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASK 646



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 178/383 (46%), Gaps = 4/383 (1%)

Query: 59  DAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
           D    ++  M   G+      +  L+   +R   L  ++ +L  M + G  PD+   N  
Sbjct: 143 DPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMA 202

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++ L   G+ D+A    + M    + P   T+N ++ GLC  R   +AL M   + ++G 
Sbjct: 203 VNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGC 262

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
           +P+ ++Y  ++  LCK  R+   + +L+ + D+G  P+ +TY  ++    ++      L 
Sbjct: 263 LPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALS 322

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
            L   + K +  D  GY   + +F   GR+ EA + + +M++ G + D+V+Y+ +++ +C
Sbjct: 323 FLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFC 382

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           + G+L+ A  ++  M K G + +  THT L++GLCK G    A   L    +  +  +  
Sbjct: 383 RIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAI 442

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSC 414
            Y+ ++    ++GK+  + +V   M  K  F  +     ++H LC  ++   A   +  C
Sbjct: 443 TYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQC 502

Query: 415 LKSGVRILKSAQKAVVDGLRHSG 437
              G  I       V+ G    G
Sbjct: 503 QSKGCFINVVNFTTVIHGFSRQG 525



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 197/460 (42%), Gaps = 44/460 (9%)

Query: 3   GKLSTRLLNICVCTF-CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
           G L  ++    V +F CK  R+   + ++      G+ PD VTYNMLI    +    D  
Sbjct: 261 GCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEA 320

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            + L          D V Y++ +     N  ++ + +++ EM+  G  PDV +Y++++  
Sbjct: 321 LSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDG 380

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             ++G+ D+A ++ + M      P T T   +LNGLCK   +  A  +    ++  + P 
Sbjct: 381 FCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPS 440

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            +TY++++ G  + G+L+ +  ++ ++   G  P  +    ++      RK     + + 
Sbjct: 441 AITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFME 500

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKI-----------------------------------G 266
             + KG   +   + TVI  F +                                    G
Sbjct: 501 QCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKG 560

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDKYTH 325
           ++KEAT  +E+M+  G+    V+Y T+I+ YC++G +E    LLD+M  K+GF      +
Sbjct: 561 KMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS---AY 617

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV----FE 381
             +I+ LC  G +  A   L  + +     + +  + ++D     G    + NV    F+
Sbjct: 618 NQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQ 677

Query: 382 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              + D      +   L  A    +A KL++  ++ GV +
Sbjct: 678 RNLIPDLKLCQKVDSQLALAGEKQAAGKLIIKFVERGVNM 717


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 26/429 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CK   ++ A++     ++ G++P V ++N+LI+  C   S      + + M 
Sbjct: 238 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 297

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD VTYN L  G     ++S + +++ +ML+ G+ PDV +Y  L+    QLG  D
Sbjct: 298 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 357

Query: 130 EANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
               + +DM+        + PC+    +ML+GLCK    D AL +F  ++  G  P+LV 
Sbjct: 358 MGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 413

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLCK G+   A W+  E+ D    PN+ T+  ++    +         +L ++ 
Sbjct: 414 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 473

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D   Y  VI  + K G ++EA +  + ++  G+   + ++N+LI  YCK   + 
Sbjct: 474 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 533

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +LD ++  G      ++T L+D     GN K        M   G       Y+ I 
Sbjct: 534 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 593

Query: 365 DRLGKDGK---IDHAI--NVFE-------SMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
             L +  K    +H +   +FE        ME +    D  TY++++  LC+ K L S +
Sbjct: 594 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL-SGA 652

Query: 409 KLLLSCLKS 417
            + L  +KS
Sbjct: 653 FVFLEIMKS 661



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 184/372 (49%), Gaps = 18/372 (4%)

Query: 56  VSFDAGYTILNRMREAGISPDVV---------TYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           VS  +  ++L   RE     DV          TY++++ G  R   L  ++  L      
Sbjct: 170 VSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 229

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
            I P V S+NS+M    +LG  D A   F  ++   L P   + NI++NGLC       A
Sbjct: 230 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 289

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 224
           L +   + KHG  P+ VTYNIL KG    G +  A  +++++ D G +P+ ITYT ++  
Sbjct: 290 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 349

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV-IAAFVKIGRLKEATDYMEQMVTDGV 283
           +C   N    +GL +L  M  +G+  +    C+V ++   K GR+ EA     QM  DG+
Sbjct: 350 QCQLGN--IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 407

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+V+Y+ +I+  CK GK + A  L DEM  +    +  TH  L+ GLC+ G +  AR 
Sbjct: 408 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 467

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLC 399
            L+ +   G   ++  YN ++D   K G I+ A+ +F    E+       T++S+++  C
Sbjct: 468 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 527

Query: 400 KAKRLPSASKLL 411
           K + +  A K+L
Sbjct: 528 KTQNIAEARKIL 539



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 195/425 (45%), Gaps = 25/425 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            I +C  C+   ++    ++ D +  G  L  ++  ++++   C+    D   ++ N+M+
Sbjct: 344 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 403

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+SPD+V Y+ +I G  +      +L L DEM +  I P+  ++ +L+  L Q G   
Sbjct: 404 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 463

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +   +I    T     +NI+++G  K+   + AL +F+ + + G  P + T+N LI
Sbjct: 464 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 523

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK   +  AR IL  +   G AP+ ++YTT+M         K   E+   MK +G  
Sbjct: 524 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 583

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQ------------MVTDGVQLDIVSYNTLINLY 297
                Y  +     +  + +     + +            M ++G+  D ++YNT+I   
Sbjct: 584 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 643

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C+   L  A++ L+ M+ +  +    T+ ILID LC  G I+ A   +  + +     + 
Sbjct: 644 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 703

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            AY  ++      G  + A+ +F  +        ++D   YS++++ LC+ + L + SK 
Sbjct: 704 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD---YSAVINRLCR-RHLVNESKF 759

Query: 411 LLSCL 415
              CL
Sbjct: 760 FF-CL 763



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 14/296 (4%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L NI +  + K+  +E+A  +    I  G+ P V T+N LI  YC+  +      I
Sbjct: 479 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 538

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLF 123
           L+ ++  G++P VV+Y +L+  A  N   + S+D L  EM   GIPP   +Y+ +   L 
Sbjct: 539 LDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 597

Query: 124 QLGKPDEAN-----RVFQ-------DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           +  K +  N     R+F+       DM    + P   T+N ++  LC+ ++   A     
Sbjct: 598 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 657

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++         TYNILI  LC  G +R A   +  L +   + +   YTT++K      
Sbjct: 658 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 717

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
             ++ +++   +  +G+      Y  VI    +   + E+  +   M++ G+  D+
Sbjct: 718 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 773



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 219
           R  D++L + + ++         +YN ++    +  ++    W + KE+ D     N  T
Sbjct: 151 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 202

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R +K +  +  L   + K        + ++++ + K+G +  A  +   ++
Sbjct: 203 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 262

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 323
             G+   + S+N LIN  C  G +  A  L  +M K G E D                  
Sbjct: 263 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 322

Query: 324 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 363
                              T+TIL+ G C+ GNI    + L+ M   GF+ N +   + +
Sbjct: 323 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 382

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K G+ID A+++F  M+      D   YS ++H LCK  +   A  L L       
Sbjct: 383 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 440

Query: 420 RILKSAQK--AVVDGLRHSGCRREAKKI 445
           RIL +++   A++ GL   G   EA+ +
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSL 468



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 4/157 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD +TYN +I   C+       +  L  M+   +     TYN LI        +  +
Sbjct: 628 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 687

Query: 97  LDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              +  + E  +    ++Y +L+  HC+   G P+ A ++F  ++          ++ ++
Sbjct: 688 DSFIYSLQEQNVSLSKFAYTTLIKAHCV--KGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 745

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N LC+    + +   F  +   G  P+L    ++IK 
Sbjct: 746 NRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 782


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 157/300 (52%)

Query: 32  DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
           D +  G    +  +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R  
Sbjct: 126 DILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185

Query: 92  LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
            L     L   ML  G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF 
Sbjct: 186 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 245

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++G CKN   D A+ +++ +      P+L+TYN LI GLCK G L+ A  ++ E+   
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 305

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+  TYTT++  C +        E    M ++    D   Y  +I+   + GR  +A
Sbjct: 306 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 365

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
              + +M++ G++ DI +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 366 EKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 159/297 (53%), Gaps = 2/297 (0%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+LM+   +LG  D
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G VP  VT+  LI
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 248

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GR+  A  I K++     +P+ ITY T++    +    K   +++  M  KG  
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D F Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  C+EG+   A  +
Sbjct: 309 PDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 368

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 365
           L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   ++  YN +++
Sbjct: 369 LREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHAPSVVTYNVLMN 424



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 139/284 (48%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +++LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 125 EDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +  + D   Y T+I    K G LK+A D +++M  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D  +Y TLI+  CKEG L+ A+     M ++    D   +T LI GLC+ G    
Sbjct: 305 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 364

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           A   L  M  +G   ++  Y  I++   K G +     + + M+
Sbjct: 365 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 408



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 4/273 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           FNI+++  CK+     A  +F  + K G  P +V+YN L+ G  + G L     +   + 
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            SG  P+  TY+ ++    +  K     E+   M  KG   +G  + T+I    K GR+ 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM++  +  D+++YNTLI   CK+G L+ A+ L+DEM  +G + DK+T+T LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 385
           DG CK G++  A  H + M +     +  AY  ++  L ++G+ +D    + E + V   
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            D  TY+ +++  CK   +   SKLL    ++G
Sbjct: 379 PDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 411



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 116/214 (54%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK ++++ A  +  + +  G++P+ VT+  LID +C+    D    I  +M  
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPD++TYN+LI G  +   L  + DL+DEM   G+ PD ++Y +L+    + G  D 
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDT 329

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + MI  ++      +  +++GLC+   + +A +M R +   G  P++ TY ++I 
Sbjct: 330 AFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIIN 389

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
             CK G +     +LKE+  +GHAP+ +TY  +M
Sbjct: 390 EFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 423



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 226

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 346

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G++
Sbjct: 347 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 89/174 (51%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   + PD++TYN LI   C+       + +++ M   G+ PD 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 312 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P   T+ +++N  CK        ++ + +Q++G  P +VTYN+L+ G
Sbjct: 372 MLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 72/146 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD  TY  LID  C+    D  +    RM +
Sbjct: 280 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 339

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD+ +Y  +++   + G   +
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWK 399

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 400 GSKLLKEMQRNGHAPSVVTYNVLMNG 425


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 26/429 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  +CK   ++ A++     ++ G++P V ++N+LI+  C   S      + + M 
Sbjct: 267 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 326

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + G+ PD VTYN L  G     ++S + +++ +ML+ G+ PDV +Y  L+    QLG  D
Sbjct: 327 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 386

Query: 130 EANRVFQDMIC-----GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
               + +DM+        + PC+    +ML+GLCK    D AL +F  ++  G  P+LV 
Sbjct: 387 MGLVLLKDMLSRGFELNSIIPCS----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 442

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y+I+I GLCK G+   A W+  E+ D    PN+ T+  ++    +         +L ++ 
Sbjct: 443 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 502

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G T D   Y  VI  + K G ++EA +  + ++  G+   + ++N+LI  YCK   + 
Sbjct: 503 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 562

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +LD ++  G      ++T L+D     GN K        M   G       Y+ I 
Sbjct: 563 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 622

Query: 365 DRLGKDGK---IDHAI--NVFE-------SMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
             L +  K    +H +   +FE        ME +    D  TY++++  LC+ K L S +
Sbjct: 623 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL-SGA 681

Query: 409 KLLLSCLKS 417
            + L  +KS
Sbjct: 682 FVFLEIMKS 690



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 184/372 (49%), Gaps = 18/372 (4%)

Query: 56  VSFDAGYTILNRMREAGISPDVV---------TYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           VS  +  ++L   RE     DV          TY++++ G  R   L  ++  L      
Sbjct: 199 VSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 258

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
            I P V S+NS+M    +LG  D A   F  ++   L P   + NI++NGLC       A
Sbjct: 259 DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 318

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-- 224
           L +   + KHG  P+ VTYNIL KG    G +  A  +++++ D G +P+ ITYT ++  
Sbjct: 319 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 378

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV-IAAFVKIGRLKEATDYMEQMVTDGV 283
           +C   N    +GL +L  M  +G+  +    C+V ++   K GR+ EA     QM  DG+
Sbjct: 379 QCQLGN--IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 436

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
             D+V+Y+ +I+  CK GK + A  L DEM  +    +  TH  L+ GLC+ G +  AR 
Sbjct: 437 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 496

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLC 399
            L+ +   G   ++  YN ++D   K G I+ A+ +F    E+       T++S+++  C
Sbjct: 497 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 556

Query: 400 KAKRLPSASKLL 411
           K + +  A K+L
Sbjct: 557 KTQNIAEARKIL 568



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 195/425 (45%), Gaps = 25/425 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGV-LPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            I +C  C+   ++    ++ D +  G  L  ++  ++++   C+    D   ++ N+M+
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 432

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+SPD+V Y+ +I G  +      +L L DEM +  I P+  ++ +L+  L Q G   
Sbjct: 433 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 492

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +   +I    T     +NI+++G  K+   + AL +F+ + + G  P + T+N LI
Sbjct: 493 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 552

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK   +  AR IL  +   G AP+ ++YTT+M         K   E+   MK +G  
Sbjct: 553 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 612

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQ------------MVTDGVQLDIVSYNTLINLY 297
                Y  +     +  + +     + +            M ++G+  D ++YNT+I   
Sbjct: 613 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 672

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C+   L  A++ L+ M+ +  +    T+ ILID LC  G I+ A   +  + +     + 
Sbjct: 673 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 732

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSMVHNLCKAKRLPSASKL 410
            AY  ++      G  + A+ +F  +        ++D   YS++++ LC+ + L + SK 
Sbjct: 733 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD---YSAVINRLCR-RHLVNESKF 788

Query: 411 LLSCL 415
              CL
Sbjct: 789 FF-CL 792



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 14/296 (4%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   L NI +  + K+  +E+A  +    I  G+ P V T+N LI  YC+  +      I
Sbjct: 508 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 567

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLF 123
           L+ ++  G++P VV+Y +L+  A  N   + S+D L  EM   GIPP   +Y+ +   L 
Sbjct: 568 LDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 626

Query: 124 QLGKPDEAN-----RVFQ-------DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
           +  K +  N     R+F+       DM    + P   T+N ++  LC+ ++   A     
Sbjct: 627 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 686

Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
            ++         TYNILI  LC  G +R A   +  L +   + +   YTT++K      
Sbjct: 687 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 746

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
             ++ +++   +  +G+      Y  VI    +   + E+  +   M++ G+  D+
Sbjct: 747 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 53/328 (16%)

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW-ILKELGDSGHAPNAIT 219
           R  D++L + + ++         +YN ++    +  ++    W + KE+ D     N  T
Sbjct: 180 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM----WDVYKEIKDK----NEHT 231

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+T++    R +K +  +  L   + K        + ++++ + K+G +  A  +   ++
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY---------------- 323
             G+   + S+N LIN  C  G +  A  L  +M K G E D                  
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351

Query: 324 -------------------THTILIDGLCKAGNIKGARLHLEYMNKIGFDSN-LEAYNCI 363
                              T+TIL+ G C+ GNI    + L+ M   GF+ N +   + +
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           +  L K G+ID A+++F  M+      D   YS ++H LCK  +   A  L L       
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA--LWLYDEMCDK 469

Query: 420 RILKSAQK--AVVDGLRHSGCRREAKKI 445
           RIL +++   A++ GL   G   EA+ +
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSL 497



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 4/157 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD +TYN +I   C+       +  L  M+   +     TYN LI        +  +
Sbjct: 657 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 716

Query: 97  LDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
              +  + E  +    ++Y +L+  HC+   G P+ A ++F  ++          ++ ++
Sbjct: 717 DSFIYSLQEQNVSLSKFAYTTLIKAHCV--KGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 774

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           N LC+    + +   F  +   G  P+L    ++IK 
Sbjct: 775 NRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 811


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 219/451 (48%), Gaps = 29/451 (6%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  V   CK  +++ A  I+    R G  PDV++YN LID +C+     +   +L  +R
Sbjct: 59  FNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLR 118

Query: 70  EA-GIS--PDVVTYNSLIAGATRNSLLSCSLDLLDEM-LEMGI-----PPDVWSYNSLMH 120
            + G +  PD+V++N+L  G ++       + +LDE+ + MG+      P+V +Y++ + 
Sbjct: 119 ASYGFTCKPDIVSFNTLFNGFSK-------MKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              + G+   A + F  M    L P   TF  +++G CK    +  + ++  +++     
Sbjct: 172 MFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSL 231

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            +VTY  LI G CK G ++ A  +   + +    PN++ YTTI+   F+       ++ L
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFL 291

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + M  +G   D   Y  +I+    IG+LKEAT+ +E M    +  D++ + T++N Y K 
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKS 351

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL--EYMNKIGFDSNLE 358
           G+++AA  +  ++ ++GFE D    + +IDG+ K G +  A  +   E  N +       
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDV------- 404

Query: 359 AYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++D L K+        +F    E+  V D F Y+S +  LCK   L  A KL    
Sbjct: 405 MYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKM 464

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           ++ G+ +   A   ++ GL   G   EA+++
Sbjct: 465 VQEGLELDLFAYTTLIYGLTSKGLMVEARQV 495



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 177/385 (45%), Gaps = 11/385 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTY+  ID +C+           N M+   + P+VVT+  LI G  +   L   + L
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
            +EM  + +  +V +Y +L+    + G+   A  ++  M+   + P +  +  ++NG  +
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQ 280

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              +DNA++    +   G   ++  Y ++I GLC  G+L+ A  I++++      P+ + 
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMI 340

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM-EQM 278
           +TT+M   F++ + K  + +   +  +G+  D     T+I    K G+L EA  Y   + 
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEK 400

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
             D      V Y  LI+  CKE        L  ++ + G   DK+ +T  I GLCK GN+
Sbjct: 401 AND------VMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSM 394
             A      M + G + +L AY  ++  L   G +  A  VF+ M       DS  +  +
Sbjct: 455 VDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLL 514

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGV 419
           +    K   + +AS LLL     G+
Sbjct: 515 IRAYEKEGNMTTASDLLLDMQTRGL 539



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 7/347 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CKA  LE   ++  +  R+ +  +VVTY  LID +C+         +  RM E  + P+
Sbjct: 208 YCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPN 267

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            + Y ++I G  +      ++  L +ML  G+  D+ +Y  ++  L  +GK  EA  + +
Sbjct: 268 SLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVE 327

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM  GDL P    F  M+N   K+     A+ M+  L + GF P++V  + +I G+ K G
Sbjct: 328 DMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387

Query: 197 RLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           +L  A  +   E        N + YT ++    +   +     + S +   G   D F Y
Sbjct: 388 QLHEAISYFCTE------KANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMY 441

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            + IA   K G L +A     +MV +G++LD+ +Y TLI     +G +  A  + DEM +
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLR 501

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
            G   D     +LI    K GN+  A   L  M   G    +   +C
Sbjct: 502 SGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLARAVSDADC 548



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 182/386 (47%), Gaps = 8/386 (2%)

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            L+R+R++   PD VT N  I     ++  + SL  L  ++  G  P   S+NS++  + 
Sbjct: 8   FLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVC 67

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFV--P 180
           +LG+   A  +   M      P   ++N +++G C+N    +A  +   L+  +GF   P
Sbjct: 68  KLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKP 127

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           ++V++N L  G  K   L    ++   +     +PN +TY+T +    ++ + KL L+  
Sbjct: 128 DIVSFNTLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSF 186

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           + MKR     +   +  +I  + K G L+      E+M    + L++V+Y  LI+ +CK+
Sbjct: 187 NCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKK 246

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+++ A  +   M +   E +   +T +I+G  + G+   A   L  M   G   ++ AY
Sbjct: 247 GEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
             I+  L   GK+  A  + E ME    V D   +++M++   K+ R+ +A  +    ++
Sbjct: 307 GVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIE 366

Query: 417 SGVRILKSAQKAVVDGLRHSGCRREA 442
            G      A   ++DG+  +G   EA
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEA 392



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 41/293 (13%)

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           ++ A   L  L  S + P+ +T    +     +    L L+ L+ +  +GY      + +
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ- 316
           V++   K+G++K A D +  M   G + D++SYN+LI+ +C+ G + +A L+L+ +    
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 317 GFEC------------------------------------DKYTHTILIDGLCKAGNIKG 340
           GF C                                    +  T++  ID  CK+G +K 
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKL 181

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVH 396
           A      M +     N+  + C++D   K G ++  ++++E M  V+ S    TY++++ 
Sbjct: 182 ALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALID 241

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             CK   +  A  + L  L+  V         +++G    G    A K  +K+
Sbjct: 242 GFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKM 294



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 17/250 (6%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L      + +   C   +L++A  I+ D  +  ++PD++ +  +++AY +     A   
Sbjct: 300 RLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVN 359

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLS------CSLDLLDEMLEMGIPPDVWSYNS 117
           + +++ E G  PDVV  +++I G  +N  L       C+    D M           Y  
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVM-----------YTV 408

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           L+  L +     E  R+F  +    L P    +   + GLCK     +A ++   + + G
Sbjct: 409 LIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEG 468

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
              +L  Y  LI GL   G +  AR +  E+  SG  P++  +  +++   +        
Sbjct: 469 LELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTAS 528

Query: 238 EILSAMKRKG 247
           ++L  M+ +G
Sbjct: 529 DLLLDMQTRG 538


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 221/469 (47%), Gaps = 30/469 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+E+ + ++ +   +G+ PD  +YN LID YC+  S    + +   M  
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVR 422

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++   +TYN+L+ G      +  +L L   ML+ G+ P+  S ++L+  LF+ GK ++
Sbjct: 423 NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQ 482

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++++ +   L     TFN ++NGLCK      A  +   +++    P+ +TY  L  
Sbjct: 483 ALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G+L TA  ++ ++   G AP+   + + +   F  +++    +I S M  +G + 
Sbjct: 543 GYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP 602

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +IA + K G L EA +   +MV +G+  ++   + L++ + KEGK++ A L+L
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662

Query: 311 DEMEK---------QGFECDKYTHT-----------------ILIDGLCKAGNIKGARLH 344
            ++              E DK +H                  ++I GLCK+G I  A+  
Sbjct: 663 QKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSL 722

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
            E +    F  +   Y+ ++      G ID A ++ + M       +  TY+S+++ LCK
Sbjct: 723 FESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +L  A  L       G+         ++D     G   EA K++ K+
Sbjct: 783 SGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 224/505 (44%), Gaps = 66/505 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +CK  R+E+AE ++ +    G ++ D V Y M+I+ YCQ    D    + N MR+AGI  
Sbjct: 298 YCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHV 357

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++  YN++I G  +   +     +L EM ++G+ PD +SYN+L+    + G   +A  + 
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M+   L   T T+N +L G C     D+ALR++  + K G  P  ++ + L+ GL KA
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+   A  + KE    G A N IT+ T++    +  +     E+L  MK      D   Y
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 256 CTVIAAFVKIGRLKEATDYMEQM---------------------------VTD------- 281
            T+   + K+G+L  AT  M +M                           V D       
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 282 -GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+  ++V+Y  LI  +CKEG L  A  L  EM   G   + +  + L+    K G +  
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 341 ARLHLEYMNKIGF----------------------DSNLEA----YNCIVDRLGKDGKID 374
           A L L+ +  I                        D N  +    +N I+  L K G+I 
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A ++FES+  K    D+FTYSS++H    +  +  A  L    L +G+        +++
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
            GL  SG    A  + +K++   IS
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGIS 802



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 192/412 (46%), Gaps = 44/412 (10%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--------------- 54
            N  +   CK  R+ +AE ++     L   PD +TY  L D YC+               
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 55  ----------FVSFDAGYTILNR----------MREAGISPDVVTYNSLIAGATRNSLLS 94
                     F SF  G+ I  +          M   G+SP++VTY +LIAG  +   L 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + +L  EM+  G+ P+V+  ++LM C ++ GK DEAN V Q ++  D+ P  +   I +
Sbjct: 622 EACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI 681

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           + +       + +        H      V +N++I GLCK+GR+  A+ + + L +    
Sbjct: 682 DKI------SHVVDTIADGNPHS---ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+  TY++++  C  +        +   M   G T +   Y ++I    K G+L  A + 
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             ++ + G+  + ++YNTLI+ YCKEGK   A+ L  +M ++G +    T++ILI GLC 
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 852

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            G ++ A   L+ M +   D N   Y  ++    K G ++    +++ M ++
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIR 904



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 196/409 (47%), Gaps = 5/409 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            +C+  R+ +A   + +   +G+  ++V Y+ ++D YC     +    IL  ++  G+SP
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           +VVTY  L+ G  ++  +  +  ++ EM E G I  D  +Y  +++   Q G+ D+A RV
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             +M    +      +N M+NGLCK    +   ++ + ++  G  P+  +YN LI G C+
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G +R A  + + +  +G A   +TY T++K           L +   M ++G   +   
Sbjct: 407 EGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
             T++    K G+ ++A +  ++ +  G+  +++++NT+IN  CK G++  A  LLD M+
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +     D  T+  L DG CK G +  A   +  M  +GF  ++E +N  +       +  
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              ++   M  +    +  TY +++   CK   L  A  L    + +G+
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 200/389 (51%), Gaps = 8/389 (2%)

Query: 30  IIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           + DG+ ++G  P + + N L++   Q         +  +MR AG+ PD  T   +     
Sbjct: 170 VFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYC 229

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           R+  ++ +++ ++EM  MG+  ++ +Y+++M C   +G  ++A R+ + +    L+P   
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKE 207
           T+ +++ G CK+   + A R+ + +++ G  V + V Y ++I G C+ GR+  A  +  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + D+G   N   Y T++    +  + +   ++L  M+  G   D + Y T+I  + + G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           +++A +    MV +G+    ++YNTL+  +C    ++ A  L   M K+G   ++ + + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 328 LIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           L+DGL KAG  + A  L  E + + G   N+  +N +++ L K G++  A  + + M+  
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLAR-GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               DS TY ++    CK  +L +A+ L+
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLM 557



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 172/375 (45%), Gaps = 40/375 (10%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V+++ L+        LS +L++ D M ++G  P + S N L++ L Q G P  A  V+ 
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T  IM    C++     A+     ++  G    LV Y+ ++   C  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGY 255
               AR IL+ L   G +PN +TYT ++K   ++ + +    ++  MK  G    D   Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I  + + GR+ +AT    +M   G+ +++  YNT+IN  CK G++E    +L EME 
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN-------------- 361
            G   DKY++  LIDG C+ G+++ A      M + G  +    YN              
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447

Query: 362 ---------------------CIVDRLGKDGKIDHAINVF-ESME---VKDSFTYSSMVH 396
                                 ++D L K GK + A+N++ E++     K+  T++++++
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507

Query: 397 NLCKAKRLPSASKLL 411
            LCK  R+  A +LL
Sbjct: 508 GLCKIGRMAEAEELL 522



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 204/454 (44%), Gaps = 25/454 (5%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT-- 63
           +T   N  +  FC  + ++ A  +    ++ GV P+ ++ + L+D       F AG T  
Sbjct: 428 TTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL-----FKAGKTEQ 482

Query: 64  ILNRMREA---GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            LN  +E    G++ +V+T+N++I G  +   ++ + +LLD M E+  PPD  +Y +L  
Sbjct: 483 ALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +LG+   A  +   M      P    FN  + G    +       +   +   G  P
Sbjct: 543 GYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP 602

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            LVTY  LI G CK G L  A  +  E+ ++G  PN    + +M C ++  K      +L
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI-VSYNTLINLYCK 299
               +K    D    C++  + ++I ++    D     + DG      V +N +I   CK
Sbjct: 663 ----QKLVNIDMIPGCSI--STIEIDKISHVVD----TIADGNPHSANVMWNVIIFGLCK 712

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G++  A  L + +  + F  D +T++ LI G   +G+I  A    + M   G   N+  
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN ++  L K GK+  A+N+F  ++ K    +  TY++++   CK  +   A KL    +
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + G++        ++ GL   G   EA K+  ++
Sbjct: 833 EEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 110/207 (53%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +   CK+ R+  A+++         LPD  TY+ LI       S D  +++ + M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             AG++P+++TYNSLI G  ++  LS +++L +++   GI P+  +YN+L+    + GK 
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA ++ Q M+   + P   T++I++ GLC   Y + A+++   + ++   P  +TY  L
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAP 215
           I G  K+G +     +  E+   G  P
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 152/328 (46%), Gaps = 18/328 (5%)

Query: 110 PDVWSYNSLMHCLFQLGK-----------PDEANRVFQDM--ICGDLTPCTATFNIMLNG 156
           P + S+  L+H L +  +           P  A  +F  +  +  D T    +F+++L  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
                   +AL +F G+ K G  P L + N L+  L ++G    A  +  ++  +G  P+
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T   + K   R+ +    +E +  M+  G   +   Y  V+  +  +G  ++A   +E
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKA 335
            +   G+  ++V+Y  L+  YCK+G++E A  ++ EM++ G    D+  + ++I+G C+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G +  A      M   G   NL  YN +++ L K G+++    V + ME      D ++Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++++   C+   +  A ++    +++G+
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGL 425



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 159/335 (47%), Gaps = 25/335 (7%)

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG--FVPEL--- 182
           PD A  +F+        P   +   +L+ L + R   +A  +   L  H     P L   
Sbjct: 84  PDAALHLFR---LAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEV 140

Query: 183 --------VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                   V++++L++    AG+L +A  +   +G  G  P+  +   ++    ++    
Sbjct: 141 YRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           +   +   M+  G   D F    +  A+ + GR+ +A +++E+M   G+++++V+Y+ ++
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-F 353
           + YC  G  E A  +L+ ++++G   +  T+T+L+ G CK G ++ A   ++ M + G  
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSA 407
             +  AY  +++   + G++D A  V    E++D+      F Y++M++ LCK  R+   
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRN--EMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            K+L      G+R  K +   ++DG    G  R+A
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 37/278 (13%)

Query: 8   RLLNICVCTFCKANRLEKAE-AIIIDGIRLGVLPDV-VTYNMLIDAYCQFVSFDAGYTIL 65
           +L+NI +   C  + +E  + + ++D I  G      V +N++I   C+        ++ 
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             +R     PD  TY+SLI G   +  +  +  L D ML  G+ P++ +YNSL++ L + 
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK   A  +F  +    ++P   T+N +++  CK   T  A ++ + + + G  P ++TY
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITY 843

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           +ILI GLC  G +  A  +L ++ ++   PN ITY                         
Sbjct: 844 SILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY------------------------- 878

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
                     CT+I  ++K G ++E +   ++M   G+
Sbjct: 879 ----------CTLIHGYIKSGNMEEISKLYDEMHIRGL 906



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CK  +  +A  +    +  G+ P V+TY++LI   C     +    +L++M E
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIE 868

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
             + P+ +TY +LI G  ++  +     L DEM   G+ P  W  N
Sbjct: 869 NNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 221/469 (47%), Gaps = 30/469 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R+E+ + ++ +   +G+ PD  +YN LID YC+  S    + +   M  
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVR 422

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++   +TYN+L+ G      +  +L L   ML+ G+ P+  S ++L+  LF+ GK ++
Sbjct: 423 NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQ 482

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++++ +   L     TFN ++NGLCK      A  +   +++    P+ +TY  L  
Sbjct: 483 ALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G+L TA  ++ ++   G AP+   + + +   F  +++    +I S M  +G + 
Sbjct: 543 GYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP 602

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  +IA + K G L EA +   +MV +G+  ++   + L++ + KEGK++ A L+L
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662

Query: 311 DEMEK---------QGFECDKYTHT-----------------ILIDGLCKAGNIKGARLH 344
            ++              E DK +H                  ++I GLCK+G I  A+  
Sbjct: 663 QKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSL 722

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCK 400
            E +    F  +   Y+ ++      G ID A ++ + M       +  TY+S+++ LCK
Sbjct: 723 FESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +L  A  L       G+         ++D     G   EA K++ K+
Sbjct: 783 SGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 224/505 (44%), Gaps = 66/505 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           +CK  R+E+AE ++ +    G ++ D V Y M+I+ YCQ    D    + N MR+AGI  
Sbjct: 298 YCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHV 357

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           ++  YN++I G  +   +     +L EM ++G+ PD +SYN+L+    + G   +A  + 
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M+   L   T T+N +L G C     D+ALR++  + K G  P  ++ + L+ GL KA
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+   A  + KE    G A N IT+ T++    +  +     E+L  MK      D   Y
Sbjct: 478 GKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 256 CTVIAAFVKIGRLKEATDYMEQM---------------------------VTD------- 281
            T+   + K+G+L  AT  M +M                           V D       
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 282 -GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+  ++V+Y  LI  +CKEG L  A  L  EM   G   + +  + L+    K G +  
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 341 ARLHLEYMNKIGF----------------------DSNLEA----YNCIVDRLGKDGKID 374
           A L L+ +  I                        D N  +    +N I+  L K G+I 
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A ++FES+  K    D+FTYSS++H    +  +  A  L    L +G+        +++
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
            GL  SG    A  + +K++   IS
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGIS 802



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 196/409 (47%), Gaps = 5/409 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            +C+  R+ +A   + +   +G+  ++V Y+ ++D YC     +    IL  ++  G+SP
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRV 134
           +VVTY  L+ G  ++  +  +  ++ EM E G I  D  +Y  +++   Q G+ D+A RV
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             +M    +      +N M+NGLCK    +   ++ + ++  G  P+  +YN LI G C+
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G +R A  + + +  +G A   +TY T++K           L +   M ++G   +   
Sbjct: 407 EGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
             T++    K G+ ++A +  ++ +  G+  +++++NT+IN  CK G++  A  LLD M+
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +     D  T+  L DG CK G +  A   +  M  +GF  ++E +N  +       +  
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH 586

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              ++   M  +    +  TY +++   CK   L  A  L    + +G+
Sbjct: 587 KVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 200/389 (51%), Gaps = 8/389 (2%)

Query: 30  IIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           + DG+ ++G  P + + N L++   Q         +  +MR AG+ PD  T   +     
Sbjct: 170 VFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYC 229

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
           R+  ++ +++ ++EM  MG+  ++ +Y+++M C   +G  ++A R+ + +    L+P   
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKE 207
           T+ +++ G CK+   + A R+ + +++ G  V + V Y ++I G C+ GR+  A  +  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + D+G   N   Y T++    +  + +   ++L  M+  G   D + Y T+I  + + G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           +++A +    MV +G+    ++YNTL+  +C    ++ A  L   M K+G   ++ + + 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 328 LIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           L+DGL KAG  + A  L  E + + G   N+  +N +++ L K G++  A  + + M+  
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLAR-GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLL 411
               DS TY ++    CK  +L +A+ L+
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLM 557



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 172/375 (45%), Gaps = 40/375 (10%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V+++ L+        LS +L++ D M ++G  P + S N L++ L Q G P  A  V+ 
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T  IM    C++     A+     ++  G    LV Y+ ++   C  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-YTFDGFGY 255
               AR IL+ L   G +PN +TYT ++K   ++ + +    ++  MK  G    D   Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I  + + GR+ +AT    +M   G+ +++  YNT+IN  CK G++E    +L EME 
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN-------------- 361
            G   DKY++  LIDG C+ G+++ A      M + G  +    YN              
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447

Query: 362 ---------------------CIVDRLGKDGKIDHAINVF-ESME---VKDSFTYSSMVH 396
                                 ++D L K GK + A+N++ E++     K+  T++++++
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507

Query: 397 NLCKAKRLPSASKLL 411
            LCK  R+  A +LL
Sbjct: 508 GLCKIGRMAEAEELL 522



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 174/389 (44%), Gaps = 76/389 (19%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ--------------- 54
            N  +   CK  R+ +AE ++     L   PD +TY  L D YC+               
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 55  ----------FVSFDAGYTILNR----------MREAGISPDVVTYNSLIAGATRNSLLS 94
                     F SF  G+ I  +          M   G+SP++VTY +LIAG  +   L 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + +L  EM+  G+ P+V+  ++LM C ++ GK DEAN V Q ++  D+ P  +   I +
Sbjct: 622 EACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEI 681

Query: 155 NGLCK--------NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
           + +          N ++ N                 V +N++I GLCK+GR+  A+ + +
Sbjct: 682 DKISHVVDTIADGNPHSAN-----------------VMWNVIIFGLCKSGRIADAKSLFE 724

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
            L +    P+  TY++++  C  +        +   M   G T +   Y ++I    K G
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK----------------LEAAYLLL 310
           +L  A +   ++ + G+  + ++YNTLI+ YCKEGK                +E A  LL
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLL 844

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           D+M +   + +  T+  LI G  K+GN++
Sbjct: 845 DQMIENNVDPNYITYCTLIHGYIKSGNME 873



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 191/423 (45%), Gaps = 25/423 (5%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT-- 63
           +T   N  +  FC  + ++ A  +    ++ GV P+ ++ + L+D       F AG T  
Sbjct: 428 TTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL-----FKAGKTEQ 482

Query: 64  ILNRMREA---GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            LN  +E    G++ +V+T+N++I G  +   ++ + +LLD M E+  PPD  +Y +L  
Sbjct: 483 ALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFD 542

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +LG+   A  +   M      P    FN  + G    +       +   +   G  P
Sbjct: 543 GYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP 602

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
            LVTY  LI G CK G L  A  +  E+ ++G  PN    + +M C ++  K      +L
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVL 662

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI-VSYNTLINLYCK 299
               +K    D    C++  + ++I ++    D     + DG      V +N +I   CK
Sbjct: 663 ----QKLVNIDMIPGCSI--STIEIDKISHVVD----TIADGNPHSANVMWNVIIFGLCK 712

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G++  A  L + +  + F  D +T++ LI G   +G+I  A    + M   G   N+  
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772

Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN ++  L K GK+  A+N+F  ++ K    +  TY++++   CK  +   A KL    +
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832

Query: 416 KSG 418
           + G
Sbjct: 833 EEG 835



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 152/328 (46%), Gaps = 18/328 (5%)

Query: 110 PDVWSYNSLMHCLFQLGK-----------PDEANRVFQDM--ICGDLTPCTATFNIMLNG 156
           P + S+  L+H L +  +           P  A  +F  +  +  D T    +F+++L  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
                   +AL +F G+ K G  P L + N L+  L ++G    A  +  ++  +G  P+
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T   + K   R+ +    +E +  M+  G   +   Y  V+  +  +G  ++A   +E
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTILIDGLCKA 335
            +   G+  ++V+Y  L+  YCK+G++E A  ++ EM++ G    D+  + ++I+G C+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G +  A      M   G   NL  YN +++ L K G+++    V + ME      D ++Y
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++++   C+   +  A ++    +++G+
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGL 425



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 159/335 (47%), Gaps = 25/335 (7%)

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG--FVPEL--- 182
           PD A  +F+        P   +   +L+ L + R   +A  +   L  H     P L   
Sbjct: 84  PDAALHLFR---LAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEV 140

Query: 183 --------VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
                   V++++L++    AG+L +A  +   +G  G  P+  +   ++    ++    
Sbjct: 141 YRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           +   +   M+  G   D F    +  A+ + GR+ +A +++E+M   G+++++V+Y+ ++
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-F 353
           + YC  G  E A  +L+ ++++G   +  T+T+L+ G CK G ++ A   ++ M + G  
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS------FTYSSMVHNLCKAKRLPSA 407
             +  AY  +++   + G++D A  V    E++D+      F Y++M++ LCK  R+   
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRN--EMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            K+L      G+R  K +   ++DG    G  R+A
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 19/207 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ +   CK+ R+  A+++         LPD  TY+ LI       S D  +++ + M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
             AG++P+++TYNSLI G  ++  LS +++L +++   GI P+  +YN+L+    + GK 
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA ++ Q M+                   +  Y + A+++   + ++   P  +TY  L
Sbjct: 822 TEAFKLKQKMV-------------------EEGYMEEAIKLLDQMIENNVDPNYITYCTL 862

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAP 215
           I G  K+G +     +  E+   G  P
Sbjct: 863 IHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 16/122 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS-----------FD 59
           N  +   CK+ +L +A  +       G+ P+ +TYN LID YC+               +
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833

Query: 60  AGY-----TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
            GY      +L++M E  + P+ +TY +LI G  ++  +     L DEM   G+ P  W 
Sbjct: 834 EGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 893

Query: 115 YN 116
            N
Sbjct: 894 GN 895


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 171/350 (48%), Gaps = 1/350 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL-SC 95
           GV  D   + +LI AY +    +       RM+E    PDV TYN ++    R  +    
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +  + +EML+    P+++++  LM  L++ G+  +A ++F DM    ++P   T+ I+++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLC+    D+A ++F  +Q  G  P+ V +N L+ G CK GR+  A  +L+     G   
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
               Y++++   FR R+Y    E+ + M +K    D   Y  +I    K G++++A   +
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             M + G+  D   YN +I   C  G LE    L  EM +     D  THTILI  +C+ 
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
           G ++ A      + K G   ++  +N ++D L K G++  A  +   MEV
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 189/407 (46%), Gaps = 12/407 (2%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K  R   A+ +  D    G+ P+ VTY +LI   CQ  S D    +   M+ +G  PD V
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSV 269

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
            +N+L+ G  +   +  + +LL    + G    +  Y+SL+  LF+  +  +A  ++ +M
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           +  ++ P    + I++ GL K    ++AL++   +   G  P+   YN +IK LC  G L
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
              R +  E+ ++   P+A T+T ++    RN   +   EI + +++ G +     +  +
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449

Query: 259 IAAFVKIGRLKEATDYMEQM-VTDGVQLDIV---SYNTLINLYCKEGKLEAAYLLLDEME 314
           I    K G LKEA   + +M V     L +    S N   +   + G +  AY  L    
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G   D  ++ +LI+G C+AG+I GA   L  +   G   +   YN +++ L + G+ +
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569

Query: 375 HAINVFESMEVKDSFTYSSMVHN-----LCKAKRLPSASKLLLSCLK 416
            A  +F +   KD F +S  V+       C+ +++  A  L +  LK
Sbjct: 570 EAFKLFYA---KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLK 613



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 189/418 (45%), Gaps = 48/418 (11%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           + ++ID   +    D  +  L  ++  G+S D   +  LI+   +  +   +++    M 
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDE-----ANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           E    PDV++YN ++  + +    +E     A  V+ +M+  + +P   TF I+++GL K
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
              T +A +MF  +   G  P  VTY ILI GLC+ G    AR +  E+  SG+ P+++ 
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +  ++                          DGF          K+GR+ EA + +    
Sbjct: 271 HNALL--------------------------DGF---------CKLGRMVEAFELLRLFE 295

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
            DG  L +  Y++LI+   +  +   A+ L   M K+  + D   +TILI GL KAG I+
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMV 395
            A   L  M   G   +   YN ++  L   G ++      + + E+    D+ T++ ++
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
            ++C+   +  A ++     KSG     +   A++DGL  SG  +EA+ +  K+ + +
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 4/335 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I +   C+    + A  +  +    G  PD V +N L+D +C+       + +L    +
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G    +  Y+SLI G  R    + + +L   ML+  I PD+  Y  L+  L + GK ++
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++   M    ++P T  +N ++  LC     +    +   + +    P+  T+ ILI 
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK--RKGY 248
            +C+ G +R A  I  E+  SG +P+  T+  ++    ++ + K    +L  M+  R   
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPAS 476

Query: 249 TFDGFGYC--TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
            F    +         V+ G + +A   +      G   DIVSYN LIN +C+ G ++ A
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGA 536

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
             LL+ ++ +G   D  T+  LI+GL + G  + A
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/468 (22%), Positives = 197/468 (42%), Gaps = 46/468 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  R+ +A  ++    + G +  +  Y+ LID   +   +   + +   M +  I PD
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           ++ Y  LI G ++   +  +L LL  M   GI PD + YN+++  L   G  +E   +  
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   +  P   T  I++  +C+N     A  +F  ++K G  P + T+N LI GLCK+G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457

Query: 197 RLRTARWILKEL---------------------------------------GDSGHAPNA 217
            L+ AR +L ++                                        D+G +P+ 
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           ++Y  ++    R       L++L+ ++ KG + D   Y T+I    ++GR +EA      
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF-- 575

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
              D  +     Y +L+   C++ K+  A+ L  +  K+    D  T    I+   K G 
Sbjct: 576 YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN-EIEQCFKEGE 634

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS---- 393
            + A   L  ++    +  L  Y   +  L + G+   A+ VF  +  K           
Sbjct: 635 TERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVK 694

Query: 394 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
           ++H LCK ++L +A ++ L  L +  +++      ++  L  S  + E
Sbjct: 695 LIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKME 742



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 150/372 (40%), Gaps = 42/372 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  I +    KA ++E A  ++      G+ PD   YN +I A C     + G ++   M
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            E    PD  T+  LI    RN L+  + ++  E+ + G  P V ++N+L+  L + G+ 
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459

Query: 129 DEA-----------------------NRVFQDMI-CGDL---------------TPCTAT 149
            EA                       NR F  M+  G +               +P   +
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           +N+++NG C+    D AL++   LQ  G  P+ VTYN LI GL + GR   A  +     
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKD 579

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           D  H+P    Y ++M    R RK  +   +     +K    D      +   F K G  +
Sbjct: 580 DFRHSP--AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGETE 636

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A   + ++ T   +L +  Y   +   C+ G+   A ++   + ++       +   LI
Sbjct: 637 RALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLI 696

Query: 330 DGLCKAGNIKGA 341
            GLCK   +  A
Sbjct: 697 HGLCKREQLDAA 708


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 206/426 (48%), Gaps = 14/426 (3%)

Query: 14  VCTF-----CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF--DAGYTILN 66
           VC F      + N++    ++  D    G  P++ +Y++L+  Y        +    +L+
Sbjct: 178 VCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLS 237

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G+ P+  TY + + G  R   +  + + L  + + G P + + +N+++H     G
Sbjct: 238 EMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDG 297

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  +A  VF  M      P   +++I+++GLCK         M   + ++G  P LV+Y+
Sbjct: 298 QVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYS 357

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            L+ GLC+AGR+  A  + K L D G   + I Y+ ++  C ++   ++  ++ + M   
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
            +  D + Y ++I A+ +  +LKEA +  E M+ DG+  ++V+   L++ +  EG +  A
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEA 477

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           +L LD++ + G   +  T+ ++I+GLCK             M K G+  +   Y+ I+D 
Sbjct: 478 FLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDG 537

Query: 367 LGKDGKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV--- 419
             K   +  A  ++  M  + +    FTY+S+++ LC   +LP    L    +  G+   
Sbjct: 538 FVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPD 597

Query: 420 RILKSA 425
           RIL ++
Sbjct: 598 RILYTS 603



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 175/373 (46%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I V   CK   +     ++++  R G+ P++V+Y+ L+   C+    +  + +  R+++
Sbjct: 322 SILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKD 381

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G   D + Y+ ++ G  ++  L    DL ++M+     PD ++Y+SL++   +  +  E
Sbjct: 382 QGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF+ MIC  + P   T  I+++G         A      +++ G VP L TY ++I 
Sbjct: 442 ALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIIN 501

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  +      I  ++   G+ P+ + Y+ I+    +    +    +   M  +G   
Sbjct: 502 GLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKP 561

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + F Y ++I       +L E     + M+ +G+  D + Y +LI  YCK   ++AA  + 
Sbjct: 562 NIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIF 621

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            EME +G   D + +T LI G  K   + GA+L +E M   G    +  Y  ++    K 
Sbjct: 622 REMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKI 681

Query: 371 GKIDHAINVFESM 383
           G    A+ ++ SM
Sbjct: 682 GDEKKAMVMYNSM 694



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 149/311 (47%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           C+   LE    +  D +    +PD   Y+ LI AYC+         +   M   GI P+V
Sbjct: 399 CQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNV 458

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           VT   L+ G +   L+  +   LD++ + G+ P++ +Y  +++ L ++ KP++   +F D
Sbjct: 459 VTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFAD 518

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           MI     P T  ++I+++G  K      A R++  +   G  P + TY  LI GLC   +
Sbjct: 519 MIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDK 578

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           L     + K +   G  P+ I YT+++ C  +    K  LEI   M+ +G + D F Y  
Sbjct: 579 LPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTC 638

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I  F K+  +  A  +ME+M+  G+   +V+Y  LI  Y K G  + A ++ + M + G
Sbjct: 639 LIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAG 698

Query: 318 FECDKYTHTIL 328
              D     IL
Sbjct: 699 IAPDAKLSCIL 709



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 6/226 (2%)

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL--GLE 238
           EL   N L+KGL +  ++   R +  ++  SG +PN  +Y+ +M       K  L    E
Sbjct: 175 ELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQE 234

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +LS M+ +G   +   Y T +    +  ++K A ++++ +   G   +   +N +I+ +C
Sbjct: 235 LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFC 294

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
            +G++  A  + D M+K GF  D ++++IL+DGLCK G++      L  M + G   NL 
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           +Y+ ++  L + G+++ A  +F+ ++ +    D   YS ++H  C+
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQ 400



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L +I +  F KA  L++A  +    +  G  P++ TY  LI+  C         T+  
Sbjct: 528 TVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFK 587

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   G++PD + Y SLIA   + S +  +L++  EM   G+  D + Y  L+    ++ 
Sbjct: 588 HMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVL 647

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             D A    ++M+   LTP   T+  ++ G  K      A+ M+  + + G  P+
Sbjct: 648 AMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 8/162 (4%)

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y T+I ++ +    E A +   E +K G E        L+ GL +   I   R   + M 
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQ--VCNFLLKGLVEGNQIMYVRSLFDDMK 203

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKI--DHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
             G   N+ +Y+ ++       K+  + A  +   MEV+    ++ TY + ++ LC+AK+
Sbjct: 204 ISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQ 263

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           + SA   L    + G         AV+ G  H G   +A ++
Sbjct: 264 VKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEV 305


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 224/499 (44%), Gaps = 51/499 (10%)

Query: 1   MFG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD 59
           +FG + + R  N  +  F +A +  K E++       GV P++ TYN+LI   C+   F+
Sbjct: 107 IFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFE 166

Query: 60  AGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM 119
                L+ M + G  PDV +Y+++I    +   L  +L+L DEM E G+ PDV  YN L+
Sbjct: 167 KARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226

Query: 120 HCLFQLGKPDEA----NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
               +      A    +R+ +D     + P   T NIM++GL K    D+ L+++  +++
Sbjct: 227 DGFLKEKDHKTAMELWDRLLED---SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
           +    +L TY+ LI GLC AG +  A  +  EL +   + + +TY T++    R  K K 
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE 343

Query: 236 GLEILSAMKRK----------------------------------GYTFDGFGYCTVIAA 261
            LE+   M+ K                                  GY  D   Y   I  
Sbjct: 344 SLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
               G + +A   M+++ + G  LD+ +Y ++I+  CK+ +LE A  L+ EM K G E +
Sbjct: 404 LCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI---- 377
            +    LI GL +   +  A   L  M K G    + +YN ++  L K GK   A     
Sbjct: 464 SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVK 523

Query: 378 NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            + E+    D  TYS ++  LC+ +++  A +L    L+SG+         ++ GL   G
Sbjct: 524 EMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583

Query: 438 CRREAKKIQSKIRMAKISH 456
              +A  +     MA + H
Sbjct: 584 KLDDAMTV-----MANMEH 597



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 179/383 (46%), Gaps = 5/383 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D+ TY+ LI   C   + D   ++ N + E   S DVVTYN+++ G  R   +  SL+L 
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             ++E     ++ SYN L+  L + GK DEA  +++ M          T+ I ++GLC N
Sbjct: 349 -RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            Y + AL + + ++  G   ++  Y  +I  LCK  RL  A  ++KE+   G   N+   
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    R+ +       L  M + G       Y  +I    K G+  EA+ ++++M+ 
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +G + D+ +Y+ L+   C++ K++ A  L  +  + G E D   H ILI GLC  G +  
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A   +  M      +NL  YN +++   K G  + A  ++  M       D  +Y++++ 
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
            LC  + +  A +        G+
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGI 670



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 154/324 (47%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           ++V+YN+LI    +    D    I   M   G + D  TY   I G   N  ++ +L ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            E+   G   DV++Y S++ CL +  + +EA+ + ++M    +   +   N ++ GL ++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A    R + K+G  P +V+YNILI GLCKAG+   A   +KE+ ++G  P+  TY
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           + ++    R+RK  L LE+     + G   D   +  +I     +G+L +A   M  M  
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
                ++V+YNTL+  + K G    A ++   M K G + D  ++  ++ GLC    +  
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIV 364
           A    +     G    +  +N +V
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 135/318 (42%), Gaps = 35/318 (11%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +   C    + KA  ++ +    G   DV  Y  +ID  C+    +    ++  M + 
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+  +    N+LI G  R+S L  +   L EM + G  P V SYN L+  L + GK  EA
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           +   ++M+     P   T++I+L GLC++R  D AL ++    + G   +++ +NILI G
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LC  G+L  A  ++  +       N +TY T+M+                          
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME-------------------------- 612

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
                     F K+G    AT     M   G+Q DI+SYNT++   C    +  A    D
Sbjct: 613 ---------GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663

Query: 312 EMEKQGFECDKYTHTILI 329
           +    G     YT  IL+
Sbjct: 664 DARNHGIFPTVYTWNILV 681



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 112/222 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L++ + N  +    + +RL +A   + +  + G  P VV+YN+LI   C+   F     
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
            +  M E G  PD+ TY+ L+ G  R+  +  +L+L  + L+ G+  DV  +N L+H L 
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            +GK D+A  V  +M   + T    T+N ++ G  K   ++ A  ++  + K G  P+++
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           +YN ++KGLC    +  A     +  + G  P   T+  +++
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 92/182 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +C  CKA +  +A A + + +  G  PD+ TY++L+   C+    D    + ++  +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           +G+  DV+ +N LI G      L  ++ ++  M       ++ +YN+LM   F++G  + 
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  ++  M    L P   ++N ++ GLC  R    A+  F   + HG  P + T+NIL++
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682

Query: 191 GL 192
            +
Sbjct: 683 AV 684


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 194/408 (47%), Gaps = 3/408 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM-REAGISP 75
           +C   ++E A  +I +    G  PD V+Y  ++   CQ         ++ +M ++  + P
Sbjct: 251 YCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFP 310

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D VTYN+L+   +++     +L+ L E  E G   D   Y+++++     G+ D A  + 
Sbjct: 311 DQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIV 370

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +MI    +P   T+  ++NGLCK    + A +M + + KHG  P  V+Y  L+ GLC+ 
Sbjct: 371 NEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQH 430

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G    AR ++    +    PNAITY+ +M    R  K     +++  M  KG+       
Sbjct: 431 GNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEI 490

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I +     ++ EA  +ME+ +  G  ++ V++ T+I+ +C+   ++ A  LLD+M  
Sbjct: 491 NLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYL 550

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
                D  T T +ID L K G I+ A ++   M K G D     Y  ++ +  K G+++ 
Sbjct: 551 NNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEE 610

Query: 376 AINVFESM--EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            I +   M    K    Y+ ++  LC      +A K++   L++  RI
Sbjct: 611 LIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRI 658



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 201/429 (46%), Gaps = 10/429 (2%)

Query: 18  CKANRLEKAEAIIID-----GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG 72
           C   +L+  E I +D     G +     D + Y M++    +         +L  M   G
Sbjct: 107 CAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRG 166

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           I+     +  ++   +R   L  ++ +L  M + G+ P++   N+ +H L    K ++A 
Sbjct: 167 IARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKAL 226

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           R  + M    +TP   T+N ++ G C     ++A+ +   +   G  P+ V+Y  ++  L
Sbjct: 227 RFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFL 286

Query: 193 CKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           C+  R++  R +++++  D+   P+ +TY T++    ++      LE L   + +G+  D
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVD 346

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
             GY  ++ +F   GR+  A + + +M+T G   D+V+Y  ++N  CK GK+E A  +L 
Sbjct: 347 KVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQ 406

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           +M K G + +  ++T L++GLC+ GN   AR  +    +  +  N   Y+ ++  L ++G
Sbjct: 407 QMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREG 466

Query: 372 KIDHAINVFESMEVKDSFTYSS----MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
           K+  A +V   M  K  F        ++ +LC  +++  A K +  CL  G  +      
Sbjct: 467 KLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFT 526

Query: 428 AVVDGLRHS 436
            V+ G   S
Sbjct: 527 TVIHGFCQS 535



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 205/470 (43%), Gaps = 42/470 (8%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
           ++ +A +L  A  ++    + GV P+++  N  I         +     L RM+  GI+P
Sbjct: 180 SYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITP 239

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +VVTYN LI G      +  +++L+ EM   G PPD  SY ++M  L Q  +  E   + 
Sbjct: 240 NVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLM 299

Query: 136 QDMICGD-LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           + M+  + L P   T+N +++ L K+ + D AL   R  ++ GF  + V Y+ ++   C 
Sbjct: 300 EKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCM 359

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG------- 247
            GR+  A+ I+ E+   G +P+ +TYT ++    +  K +   ++L  M + G       
Sbjct: 360 QGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVS 419

Query: 248 ----------------------------YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
                                       +T +   Y  V+    + G+L EA D + +M+
Sbjct: 420 YTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREML 479

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
           T G     V  N LI   C E K+  A   ++E   +G   +    T +I G C++ NI 
Sbjct: 480 TKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNID 539

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
            A   L+ M       +   +  I+D LGK G+I+ A      M  K       TY +++
Sbjct: 540 TALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVI 599

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           H  CK  R+    KLL   L       ++A   V++ L + G    A K+
Sbjct: 600 HQYCKMGRVEELIKLLGKMLSRSK--CRTAYNQVIEKLCNFGNPEAADKV 647



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 2/331 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V    K    ++A   + +    G   D V Y+ +++++C     D    I+N M  
Sbjct: 316 NTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMIT 375

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPDVVTY +++ G  +   +  +  +L +M + G  P+  SY +L++ L Q G   E
Sbjct: 376 KGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLE 435

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +         TP   T++++++GL +      A  + R +   GF P  V  N+LIK
Sbjct: 436 AREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIK 495

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC   ++  A+  ++E  + G A NA+ +TT++    ++      L +L  M       
Sbjct: 496 SLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHP 555

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   +  +I A  K GR++EAT Y  +M+  G+    V+Y  +I+ YCK G++E    LL
Sbjct: 556 DAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLL 615

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            +M  +  +C +  +  +I+ LC  GN + A
Sbjct: 616 GKMLSRS-KC-RTAYNQVIEKLCNFGNPEAA 644



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/149 (19%), Positives = 72/149 (48%), Gaps = 2/149 (1%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           +N+ + + C   ++ +A+  + + +  G   + V +  +I  +CQ  + D   ++L+ M 
Sbjct: 490 INLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMY 549

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                PD VT+ ++I    +   +  +     +ML+ G+ P   +Y +++H   ++G+ +
Sbjct: 550 LNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVE 609

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLC 158
           E  ++   M+    + C   +N ++  LC
Sbjct: 610 ELIKLLGKML--SRSKCRTAYNQVIEKLC 636


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 190/396 (47%), Gaps = 37/396 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD---------- 59
           + I +   CK  R+E+A+ ++++    G+ P+VVTYN L++AY + + F+          
Sbjct: 218 MTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLME 277

Query: 60  --------AGYTIL-----------------NRMREAGISPDVVTYNSLIAGATRNSLLS 94
                   A YT+L                  +M E G+  D+  + S+I+   +   + 
Sbjct: 278 MDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMK 337

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L DE+ E G+  +  +Y +L+H     G+ D A  +  +M    L      FN ++
Sbjct: 338 RAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLI 397

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           NG CK    D ALRM   ++K GF  ++ TYN +  GLCK  R   A+  L  + + G  
Sbjct: 398 NGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVD 457

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PNA+++T ++    +         +   MK+KG   +   Y T+I  + K G+LKEA   
Sbjct: 458 PNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRL 517

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M + G+  DI +Y TL++  C  GK+E A  LL+E+ ++G      T+T +I GL K
Sbjct: 518 KDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSK 577

Query: 335 AGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            G  + A RL+ E M   G   +   Y  +V  L K
Sbjct: 578 EGRSEEAFRLYDEMM-AAGLTPDDRVYTSLVANLHK 612



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 183/390 (46%), Gaps = 16/390 (4%)

Query: 41  DVVTYNM--LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
           DV  Y+M  +ID  C+    +    ++  M   GI P+VVTYN+L+    +        +
Sbjct: 212 DVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIK----IMDFE 267

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLF-----QLGKPDEANRVFQDMICGDLTPCTATFNIM 153
            ++EML + +  D   YN+  + L        GK  EA +VF+ M+   +      F  +
Sbjct: 268 GVNEMLRL-MEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSI 326

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           ++  CK      A  +F  L + G V    TY  LI G C +G+L  A  ++ E+   G 
Sbjct: 327 ISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGL 386

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
             N + + T++    +       L +   M++KG+  D F Y T+     K+ R +EA  
Sbjct: 387 DMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKR 446

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
           ++  MV  GV  + VS+  +I+++CKEG L  A  +  +M+K+G + +  T+  LIDG  
Sbjct: 447 WLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYS 506

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           K G +K A    + M  IG  S++  Y  +V      GK++ A+ +   +  K       
Sbjct: 507 KKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIV 566

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           TY++++  L K  R   A +L    + +G+
Sbjct: 567 TYTAIISGLSKEGRSEEAFRLYDEMMAAGL 596



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 194/449 (43%), Gaps = 39/449 (8%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           +ML   Y     F+ G+ + + M   G+  D  +    +    R+  +  SL    +M+E
Sbjct: 149 DMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVE 208

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
             +   V+S   ++  L + G+ + A  +  +M    + P   T+N ++N   K    + 
Sbjct: 209 FKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEG 268

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
              M R ++    V    TY +LI+    +G++  A  + +++ + G   +   +T+I+ 
Sbjct: 269 VNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIIS 328

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
              +    K    +   +  +G   +   Y  +I      G+L  A   + +M + G+ +
Sbjct: 329 WQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDM 388

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH-------------------- 325
           ++V +NTLIN YCK+G ++ A  + D MEK+GFE D +T+                    
Sbjct: 389 NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWL 448

Query: 326 ---------------TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
                          TI+ID  CK GN+  A    + M K G   N+  YN ++D   K 
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKK 508

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GK+  A  + + ME      D +TY+++VH  C   ++  A  LL    + G+ I     
Sbjct: 509 GKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTY 568

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
            A++ GL   G   EA ++  ++  A ++
Sbjct: 569 TAIISGLSKEGRSEEAFRLYDEMMAAGLT 597


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 202/423 (47%), Gaps = 5/423 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           ++S  L+ +CV +       ++A  +++     G  P +++ N L++   +    D    
Sbjct: 150 QVSDALIKVCVAS----GMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIA 205

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I  +++  G++P+  TY   I G  R   L+ ++D+  +M E G+ P+ +SY + +  L 
Sbjct: 206 IYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLC 265

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
             G+ D   +V QD+I   +      + +++ G C       A  + R ++K GF P++ 
Sbjct: 266 LHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVY 325

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y  LI G C  G L  A  +  E+   G   N +  ++I++   +              
Sbjct: 326 VYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEF 385

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K+ G  FD   Y  V+ A  K+G+++EA + + +M    +  DI++Y T+I+ Y  +GK+
Sbjct: 386 KKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKV 445

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  +  EM+  G + D  T+ +L  G  + G  + A   L YM   G   +   +N I
Sbjct: 446 VDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMI 505

Query: 364 VDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
           ++ L   GK+D A   F+++E K    YS+MV+  C+A  +  A  LL+   K G RILK
Sbjct: 506 IEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQG-RILK 564

Query: 424 SAQ 426
            A 
Sbjct: 565 KAS 567



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 170/388 (43%), Gaps = 54/388 (13%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK  ++E+A  ++++     ++PD++ Y  +I  Y           I   M++
Sbjct: 398 NVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKD 457

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD+VTYN L  G +RN L   +L LL+ M   G+ PD  ++N ++  L   GK D+
Sbjct: 458 IGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDD 517

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV----------- 179
           A   F ++       C   ++ M+NG C+  + + A  +   L K G +           
Sbjct: 518 AQAFFDNL----EEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLG 573

Query: 180 ------------------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                                   P ++ Y+ +I  L +AG +  A+++   L D G AP
Sbjct: 574 NLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAP 633

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI---------G 266
           + ITYT ++    R  K K    +L  MK +G   D   Y  ++    KI          
Sbjct: 634 DVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLD 693

Query: 267 RLKEATDYME------QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            +K   + M+      +M    ++ D++ Y  LI+ +CK   ++ A  L +EM  +G   
Sbjct: 694 AMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAP 753

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYM 348
           D  T+T L+ G C  GNIK A +  + M
Sbjct: 754 DTVTYTALLSGYCNVGNIKKAVVLFDEM 781



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 181/435 (41%), Gaps = 35/435 (8%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FC+   L +A  +  D    GV P+  +Y   I+  C     D G+ +L  +  A
Sbjct: 224 IAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINA 283

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
            I  DV  Y  +I G      L  +  +L EM + G  PDV+ Y +L+     +G   +A
Sbjct: 284 KIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKA 343

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +  +M+   +       + +L GL +          F+  +K G   +   YN+++  
Sbjct: 344 LALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDA 403

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           LCK G++  A  +L E+      P+ I YTT++   F   K    L I   MK  G+  D
Sbjct: 404 LCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPD 463

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI----------------- 294
              Y  +   F + G  +EA   +  M T GV+ D V++N +I                 
Sbjct: 464 IVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFD 523

Query: 295 --------------NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
                         N YC+   +  A+ LL  + KQG    K +   L+  LC  G+ + 
Sbjct: 524 NLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEK 583

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A   LE M  +  +  +  Y+ ++  L + G+++ A  VF  +       D  TY+ M++
Sbjct: 584 ALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMIN 643

Query: 397 NLCKAKRLPSASKLL 411
             C+  ++  A  +L
Sbjct: 644 GYCRMNKMKEAWHVL 658



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 171/362 (47%), Gaps = 28/362 (7%)

Query: 61  GYTILNRMREAGISPDVVTYNSLI-----AGATR--NSLL------SCSLDL----LDEM 103
            ++  N+++E+G S D  TY +++      G +R  +S+L        +LD     L E 
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 104 LEMGIPPDVWSY-----NSLMHCLFQLGKPDEA-NRVFQDMICGDLTPCTATFNIMLNGL 157
           L  GI  + +S      ++L+      G  D+A + + Q   CG   P   + N ++N L
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCG-FAPQILSCNFLMNRL 194

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            ++R  D A+ ++R L+  G  P   TY I IKG C+ G L  A  + +++ +SG  PN+
Sbjct: 195 VESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNS 254

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            +YTT ++    + +  LG ++L  +       D F Y  VI  F    +LKEA   + +
Sbjct: 255 FSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILRE 314

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M   G   D+  Y  LI+ YC  G L  A  L DEM  +G + +    + ++ GL + G 
Sbjct: 315 MEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGM 374

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSS 393
                   +   K+G   +   YN ++D L K GK++ A+ +   M+    V D   Y++
Sbjct: 375 ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTT 434

Query: 394 MV 395
           ++
Sbjct: 435 VI 436



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 84/224 (37%), Gaps = 17/224 (7%)

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           L     + +K  GY+ D + Y  ++      G  ++    + +++     LD      ++
Sbjct: 75  LAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDF----GIV 130

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           NL+   G         D +  + F         LI     +G    A   L      GF 
Sbjct: 131 NLFEALG---------DGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFA 181

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 410
             + + N +++RL +  K+D AI ++  ++      + +TY+  +   C+   L  A  +
Sbjct: 182 PQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDV 241

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
                +SGV     +    ++GL   G      K+   +  AKI
Sbjct: 242 FRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI 285


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 197/412 (47%), Gaps = 10/412 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LNI +   C  NR+ +  A +   +R G +PDVVT+  LI   C          +  RM+
Sbjct: 129 LNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQ 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP------PDVWSYNSLMHCLF 123
           + G +P+VVTY +LI G      ++ +L    EML    P      P+V SY+ ++  L 
Sbjct: 189 KLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLC 248

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G  +EA  +F +M+   + P   TF+++++ LCK      A ++   + + G VP L 
Sbjct: 249 KVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLF 308

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY  LIKG C  G L +A+ +   +   G+ P+ I+Y  ++    +  K +  +++ + M
Sbjct: 309 TYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEM 368

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
              G   D      ++ A    G++ +A +    +    +  D+      ++  CK G +
Sbjct: 369 LHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYI 428

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
             A  L +E+E    + D  T   LIDGLCKAG ++ A    E + + G   +  AY+ +
Sbjct: 429 FEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSM 488

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           +    K G++D A  +F+ ME      D  TYS ++    ++ +L    +LL
Sbjct: 489 IHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 10/392 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD++T N+LI+  C     + G   +  +   G  PDVVT+ +LI G      +  +
Sbjct: 121 GLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEA 180

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI------CGDLTPCTATF 150
             L   M ++G  P+V +Y +L+  L  LG  + A +  Q+M+        +  P   ++
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           +I+++GLCK    + A+ +F  +   G  P +VT+++LI  LCK G++  A+ +L+ +  
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  PN  TYT+++K            E+  +M  KGY  D   Y  +I  + K  +++E
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A     +M+  G+  D+ +   L+      GK++ A  L   ++      D     I +D
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLD 420

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 386
           GLCK G I  A      +       ++E + C++D L K GK++ A  +FE +  +    
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           D+  YSSM+H  CK  ++  A+ L     ++G
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 164/363 (45%), Gaps = 78/363 (21%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ---------------- 54
           +I +   CK    E+A  +  + +  GV P+VVT+++LID  C+                
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300

Query: 55  ---------FVSFDAGYTILNRMREA----------GISPDVVTYNSLIAGATRNSLLSC 95
                    + S   G+ ++  +  A          G  PDV++YN LI G  +   +  
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM----ICGDLTPCTATFN 151
           ++ L +EML +G+ PDV +   L+  LF  GK D+A  +F+ +    +  DL  C     
Sbjct: 361 AMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICC---- 416

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
           I L+GLCKN Y   A+++F  L+ +    ++ T+  LI GLCKAG+L TA  + ++L + 
Sbjct: 417 IFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEE 476

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+A+ Y+++                                   I  F K G++ +A
Sbjct: 477 GIQPDAMAYSSM-----------------------------------IHGFCKKGQVDKA 501

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
               ++M  +G   D+++Y+ L+  + +  KLE    LL  M ++    D   + I+ D 
Sbjct: 502 NILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDM 561

Query: 332 LCK 334
           +CK
Sbjct: 562 VCK 564



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 35/303 (11%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            ++ +   CK  ++ KA+ ++   I++G++P++ TY  LI  +C     ++   +   M 
Sbjct: 275 FSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMP 334

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PDV++YN LI G  +   +  ++ L +EML +G+ PDV +   L+  LF  GK D
Sbjct: 335 SKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVD 394

Query: 130 EANRVFQDM----ICGDLTPC-------------------------------TATFNIML 154
           +A  +F+ +    +  DL  C                                 TF  ++
Sbjct: 395 DAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLI 454

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLCK    + A  +F  L + G  P+ + Y+ +I G CK G++  A  + +++ ++G +
Sbjct: 455 DGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCS 514

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ ITY+ +M+  + + K +  +++L  M  K    D   Y  V     K  + KE  D 
Sbjct: 515 PDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDL 574

Query: 275 MEQ 277
           +++
Sbjct: 575 LQR 577



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 39/271 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC    L  A+ + +     G  PDV++YNMLI+ YC+ +  +    + N M   G+ PD
Sbjct: 317 FCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPD 376

Query: 77  VVTYNSLIA-----------------------------------GATRNSLLSCSLDLLD 101
           V T   L+                                    G  +N  +  ++ L +
Sbjct: 377 VKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFN 436

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+    +  D+ ++  L+  L + GK + A  +F+ +    + P    ++ M++G CK  
Sbjct: 437 ELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKG 496

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D A  +F+ ++++G  P+L+TY+IL++G  ++ +L     +L  + +    P+   Y 
Sbjct: 497 QVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYA 556

Query: 222 TIMKCCFRNRKYKLGLEILSAM----KRKGY 248
            +     ++ KYK  L++L        R GY
Sbjct: 557 IVEDMVCKDEKYKEWLDLLQRFFVQKHRNGY 587


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 198/414 (47%), Gaps = 4/414 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+  D +T N++I+  C+      G+++L  M + G+ P V+T  +LI G      ++ 
Sbjct: 106 LGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQ 165

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           ++ L+D M +M  P DV++Y  L++ L + G    A    + M   +  P    ++ +++
Sbjct: 166 AVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMD 225

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           GLCK+     AL +   +   G  P LVTY  LI+GLC  GR +    +L E+   G   
Sbjct: 226 GLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRL 285

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +  T   ++    +  K      ++  M   G   D F Y ++I  +    ++ EA    
Sbjct: 286 DLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             MV+ G   DIV + +LI+ +CK+  +     LL+EM K GF  D  T T LI G C+A
Sbjct: 346 HLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQA 405

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G    A+     M+K G   NL+    I+D L K   +  A+++ E+ME      +   Y
Sbjct: 406 GRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIY 465

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           S ++  +C A +L +A +L  S    G++I       ++ GL   G   +A+ +
Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDL 519



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 156/334 (46%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P++VTY  LI   C F  +    ++L+ M + G+  D+ T N L+    +   +  +
Sbjct: 247 GVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQA 306

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             ++  M+  G  PDV++YNSL+H      K +EA RVF  M+     P    F  +++G
Sbjct: 307 KSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHG 366

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK++  +  + +   + K GFVP++VT+  LI G C+AGR   A+ +   +   G  PN
Sbjct: 367 WCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPN 426

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T   I+    +       + +  AM++     +   Y  ++      G+L  A +   
Sbjct: 427 LQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFS 486

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   G+Q+++ +Y  +I   CK+G L+ A  LL  ME+ G   D  T+ + + GL    
Sbjct: 487 SLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKK 546

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            I  +  +L  M   GF  +       ++ L  +
Sbjct: 547 EIARSIKYLTIMRDKGFSVDAATTEITINYLSTN 580



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 194/417 (46%), Gaps = 6/417 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T  LNI +   C+   +    +++    +LG+ P V+T   LI+  C   +      +++
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVD 171

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M +     DV TY  LI G  +      +++ L +M E    P+V  Y+++M  L + G
Sbjct: 172 HMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDG 231

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA  +  +M    + P   T+  ++ GLC          +   + K G   +L T N
Sbjct: 232 LVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLN 291

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKR 245
           IL+   CK G++  A+ ++  +  +G  P+  TY +++   C +N K    + +   M  
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN-KMNEAMRVFHLMVS 350

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   D   + ++I  + K   + +    +E+M   G   D+V++ TLI  +C+ G+  A
Sbjct: 351 RGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLA 410

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  L   M K G   +  T  +++DGLCK   +  A    E M K   D N+  Y+ ++D
Sbjct: 411 AKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLD 470

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            +   GK++ A  +F S+  K    + +TY+ M+  LCK   L  A  LL++  ++G
Sbjct: 471 GMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENG 527



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 173/375 (46%), Gaps = 4/375 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV TY +LI+  C+     A    L +M E    P+VV Y++++ G  ++ L+S +L+L 
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM   G+ P++ +Y  L+  L   G+  E   +  +MI   +     T NI+++  CK 
Sbjct: 241 SEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKE 300

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A  +   +   G  P++ TYN LI   C   ++  A  +   +   G  P+ + +
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVF 360

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           T+++    +++     + +L  M + G+  D   + T+I  F + GR   A +    M  
Sbjct: 361 TSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHK 420

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G   ++ +   +++  CK   L  A  L + MEK   + +   ++IL+DG+C AG +  
Sbjct: 421 YGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNA 480

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A      +   G   N+  Y  ++  L K G +D A ++  +ME    + D+ TY+  V 
Sbjct: 481 AWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQ 540

Query: 397 NLCKAKRLPSASKLL 411
            L   K +  + K L
Sbjct: 541 GLLTKKEIARSIKYL 555



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 1/299 (0%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L  + LNI V  FCK  ++ +A+++I   I  G  PDV TYN LI  YC     +    
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMR 343

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           + + M   G  PD+V + SLI G  ++  ++  + LL+EM +MG  PDV ++ +L+    
Sbjct: 344 VFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFC 403

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q G+P  A  +F +M      P   T  ++L+GLCK      A+ +   ++K      +V
Sbjct: 404 QAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIV 463

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            Y+IL+ G+C AG+L  A  +   L   G   N  TYT ++K   +        ++L  M
Sbjct: 464 IYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINM 523

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-LYCKEG 301
           +  G   D   Y   +   +    +  +  Y+  M   G  +D  +    IN L   EG
Sbjct: 524 EENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEG 582



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 144/316 (45%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   R ++  +++ + I++G+  D+ T N+L+DA+C+        +++  M   G  PD
Sbjct: 262 LCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPD 321

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TYNSLI      + ++ ++ +   M+  G  PD+  + SL+H   +    ++   + +
Sbjct: 322 VFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLE 381

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M      P   T+  ++ G C+      A  +F  + K+G VP L T  +++ GLCK  
Sbjct: 382 EMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGN 441

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A  + + +  S    N + Y+ ++       K     E+ S++  KG   + + Y 
Sbjct: 442 LLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYT 501

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I    K G L +A D +  M  +G   D  +YN  +     + ++  +   L  M  +
Sbjct: 502 IMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDK 561

Query: 317 GFECDKYTHTILIDGL 332
           GF  D  T  I I+ L
Sbjct: 562 GFSVDAATTEITINYL 577


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 205/419 (48%), Gaps = 5/419 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR LN  +    +   +E AE +  +    GV PD ++Y +++  YC+  +       L
Sbjct: 169 NTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWL 228

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M E G   D  T+  +I+  +     + +L     +++MG+ P++ ++  ++  L + 
Sbjct: 229 SVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKR 288

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVT 184
           G   +A  + ++M+     P   T   +++GLCK  +T+ A R+F  L +     P ++T
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I G C+  +L  A  +L  + + G  PN  TYTT++    +   ++   ++++ M 
Sbjct: 349 YTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMS 408

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G++ +   Y  ++    K GR++EA   +E    +G++ D  +YN L++ +CK+  + 
Sbjct: 409 SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIR 468

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L ++M K G + D +++T LI   C+   +K + +  E   +IG     + Y  ++
Sbjct: 469 QALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 528

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               ++G +  A+  F  +       DS TY +++  LCK  +   A  L  S ++ G+
Sbjct: 529 CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 195/437 (44%), Gaps = 5/437 (1%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V +F +  RL++A  ++I+    G++P+  T N +I    +    +    +   M   G+
Sbjct: 142 VESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGV 201

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD ++Y  ++    +   +  +   L  MLE G   D  ++  ++      G    A  
Sbjct: 202 QPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALW 261

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ ++   L P    F  M+ GLCK      A  M   +   G+ P + T+  LI GLC
Sbjct: 262 YFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLC 321

Query: 194 KAGRLRTA-RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           K G    A R  LK +    H PN +TYT ++    R  K      +LS MK +G   + 
Sbjct: 322 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNT 381

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I    K G  + A D M  M ++G   ++ +YN ++N  CK G+++ AY +L++
Sbjct: 382 NTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED 441

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
             + G + DK+T+ IL+   CK  NI+ A      M KIG   ++ +Y  ++    ++ +
Sbjct: 442 GFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENR 501

Query: 373 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           +  +   FE       +  + TY+SM+   C+   L  A K        G         A
Sbjct: 502 MKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561

Query: 429 VVDGLRHSGCRREAKKI 445
           ++ GL     R EA+ +
Sbjct: 562 IISGLCKQSKRDEARSL 578



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            CK    EKA  + +  +R     P+V+TY  +I  YC+    +    +L+RM+E G+ P
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TY +LI G  +      + DL++ M   G  P++ +YN++++ L + G+  EA ++ 
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           +D     L P   T+NI+++  CK      AL +F  + K G  P++ +Y  LI   C+ 
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R++ +    +E    G  P   TYT+++    R     L ++    +   G   D   Y
Sbjct: 500 NRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITY 559

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
             +I+   K  +  EA    + M+  G+    V+  TL   YCK
Sbjct: 560 GAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 4/196 (2%)

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           ++ +F ++GRLKEA + + +M   G+  +  + N +I +  + G +E A LL +EM  +G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
            + D  ++ +++   CK GNI  A   L  M + GF  +   +  I+ R    G    A+
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 378 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
             F  +       +   ++ M+  LCK   +  A ++L   +  G +       +++DGL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 434 RHSGCRREAKKIQSKI 449
              G   +A ++  K+
Sbjct: 321 CKKGWTEKAFRLFLKL 336


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 195/426 (45%), Gaps = 10/426 (2%)

Query: 30  IIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
           + DG+ R GV PD  ++  L+   C+    +    +L  M   G S D  T   ++    
Sbjct: 168 VFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLC 227

Query: 89  RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
                    +    MLE G PP+V +Y + +  L +     +A  V ++M+   L P   
Sbjct: 228 EKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVY 287

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKE 207
           T   +++GLCK  +T+ A R+F  L K   + P + TY ++I G C+ G+L  A  +L  
Sbjct: 288 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 347

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + + G  PN  TYTT++    +   +    E+++ MK++G+  + + Y  VI  F K G+
Sbjct: 348 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 407

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           ++EA   +    + G++ D ++Y  LI  +CK+G +  A  L D M + G   D   +T 
Sbjct: 408 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTS 467

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           LI   C+   ++ ++   +    IG     + Y  ++    K G+   A+ VFE M    
Sbjct: 468 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 527

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              DS TY +++  LCK  RL  A  L    L    R++      V   L    CRRE  
Sbjct: 528 CFADSITYGALISGLCKESRLEEAKALYEGMLDK--RLVPCEVTRVT--LTFEYCRREKT 583

Query: 444 KIQSKI 449
            I   +
Sbjct: 584 SIAVSV 589



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 176/373 (47%), Gaps = 3/373 (0%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + VC  C+  ++E+ +A++    R G   D  T  +++ + C+   F        RM E 
Sbjct: 188 VVVC--CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLET 245

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  P+VV Y + I G  +   +  +  +L+EM+  G+ P+V+++ +L+  L ++G  + A
Sbjct: 246 GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERA 305

Query: 132 NRVFQDMI-CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            R+F  +I      P   T+ +M+ G C+      A  +   + + G  P   TY  LI 
Sbjct: 306 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 365

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G    A  ++ ++   G  PN  TY  ++    +  K +   ++L     +G  F
Sbjct: 366 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 425

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I    K G +  A D  ++MV +G   DI +Y +LI+ YC++ ++E +    
Sbjct: 426 DKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFF 485

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D+    G    K T+T +I G CK G    A    E M + G  ++   Y  ++  L K+
Sbjct: 486 DKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKE 545

Query: 371 GKIDHAINVFESM 383
            +++ A  ++E M
Sbjct: 546 SRLEEAKALYEGM 558



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 197/439 (44%), Gaps = 9/439 (2%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V  F +A RL +A  ++++    G+   V T N ++    +  SF     + + M  AG+
Sbjct: 118 VAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGV 177

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PD  ++ +L+    R   +     LL  M   G   D  +   ++  L + G+  + + 
Sbjct: 178 CPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 237

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
            F+ M+     P    +   ++GLCK RY   A  +   +   G  P + T+  LI GLC
Sbjct: 238 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 297

Query: 194 KAGRL-RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           K G   R  R  LK +  S + PN  TYT ++    R  K      +L  M  +G   + 
Sbjct: 298 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 357

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y T+I    K G    A + M +M  +G   +I +YN +I+ +CK+GK++ AY +L  
Sbjct: 358 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 417

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
              QG + DK T+TILI   CK G+I  A    + M + G   ++EAY  ++    +  +
Sbjct: 418 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 477

Query: 373 IDHAINVFES------MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           ++ +   F+       +  K   TY+SM+   CK  R   A ++    +++G        
Sbjct: 478 MEESQKFFDKCLMIGLLPTKQ--TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITY 535

Query: 427 KAVVDGLRHSGCRREAKKI 445
            A++ GL       EAK +
Sbjct: 536 GALISGLCKESRLEEAKAL 554



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 155/339 (45%), Gaps = 1/339 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + V + C+  R +         +  G  P+VV Y   ID  C+       + +L  M  
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 279

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPD 129
            G+ P+V T+ +LI G  +      +  L  ++++     P+V +Y  ++    + GK  
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 339

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +   M+   L P T T+  ++ G CK    D A  +   +++ GF+P + TYN +I
Sbjct: 340 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 399

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK G+++ A  +L+     G   + ITYT ++    +       L++   M   G  
Sbjct: 400 DGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCC 459

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y ++I+ + +  +++E+  + ++ +  G+     +Y ++I  YCK G+   A  +
Sbjct: 460 PDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRV 519

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
            + M + G   D  T+  LI GLCK   ++ A+   E M
Sbjct: 520 FERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM 558



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 157/337 (46%), Gaps = 46/337 (13%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+  +L +AE +++  +  G+ P+  TY  LI  +C+  SFD  + ++N+M++ G  P+
Sbjct: 332 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPN 391

Query: 77  VVTYNSLIAG----------------ATRNSL-------------------LSCSLDLLD 101
           + TYN++I G                AT   L                   ++ +LDL D
Sbjct: 392 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 451

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
            M+E G  PD+ +Y SL+    Q  + +E+ + F   +   L P   T+  M+ G CK  
Sbjct: 452 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 511

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
            +  ALR+F  + ++G   + +TY  LI GLCK  RL  A+ + + + D    P  +T  
Sbjct: 512 RSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRV 571

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKG--YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           T+     R  K  + + +L  + ++   +T D      V+     +G +  A+ ++++++
Sbjct: 572 TLTFEYCRREKTSIAVSVLDRLDKRQQVHTVD-----VVVRKLSALGDVDAASLFLKKVL 626

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +   +D  +Y   IN  C E      Y L  EM ++
Sbjct: 627 DEDYAVDHATYTGFIN-SCYENN---RYALASEMSEK 659



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 142/293 (48%), Gaps = 8/293 (2%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A  M   ++ HG    + T N +++   + G    AR +   +  +G  P+  ++  ++
Sbjct: 129 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALV 188

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C R  K +    +L+AM R G++ D      V+ +  + GR K+ +++  +M+  G  
Sbjct: 189 VVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP 248

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RL 343
            ++V+Y   I+  CK   ++ A+ +L+EM  +G + + YTHT LIDGLCK G  + A RL
Sbjct: 249 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 308

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTYSSMVHNLC 399
            L+ +    +  N+  Y  ++    ++GK+  A    + + E     ++ TY++++   C
Sbjct: 309 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHC 368

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
           K      A +L+    + G         AV+DG    G  +EA K+   +RMA
Sbjct: 369 KGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV---LRMA 418



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 84/222 (37%), Gaps = 59/222 (26%)

Query: 255 YCTVIAAFV--------------------KIGRLKEATDYMEQMVTDGVQL--------- 285
           Y T   AFV                    + GRL EA D + +M + G+ L         
Sbjct: 94  YVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVL 153

Query: 286 --------------------------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
                                     D  S+  L+ + C+EGK+E    LL  M + GF 
Sbjct: 154 RVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFS 213

Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
            D  T T+++  LC+ G  K        M + G   N+  Y   +D L K   +  A +V
Sbjct: 214 LDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHV 273

Query: 380 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            E M  +    + +T+++++  LCK      A +L L  +KS
Sbjct: 274 LEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 315


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 202/420 (48%), Gaps = 15/420 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            + PD  T N+LI+ +C     +  +++L+++ + G  PD VT  +LI G      +  +
Sbjct: 93  AIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKA 152

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT-PCTATFNIMLN 155
           L   D++L  G   D  SY +L++ + ++G+   A ++ +  I G LT P    +N +++
Sbjct: 153 LHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRR-IDGRLTEPNVVMYNTIID 211

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            LCK +    A  +F  +   G    +VTY+ +I G C  G+L  A   L E+      P
Sbjct: 212 CLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINP 271

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           +   Y T++    +  K K    +L+ + +     +   Y T+I  + K   +  A   M
Sbjct: 272 DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--HVFNAVGLM 329

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                 GV  D+ SYN +IN  CK  ++E A  L  EM ++    +  T+  LIDGLCK+
Sbjct: 330 ------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G I  A   ++ M+  G  +N+  YN +++ L K+G++D AI +   M+ +    D +T 
Sbjct: 384 GRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTL 443

Query: 392 SSMVHN-LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + ++H  LCK KRL +A  L    L  G          ++ G    G   EA  +QSK+ 
Sbjct: 444 NILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 28/331 (8%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VV YN +ID  C+         + + M   GIS +VVTY+++I G      L+ +L  
Sbjct: 201 PNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGF 260

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV---------------FQDMICG--- 141
           L+EM+   I PDV+ YN+L+  L + GK  EA  V               +  +I G   
Sbjct: 261 LNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK 320

Query: 142 ---------DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
                     +TP   ++NIM+N LCK +  + AL +++ + +   VP  VTYN LI GL
Sbjct: 321 HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGL 380

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
           CK+GR+  A  ++ E+ D GH  N ITY +++    +N +    + +++ MK +G   D 
Sbjct: 381 CKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDM 440

Query: 253 FGYCTVIAAFV-KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
           +    ++   + K  RLK A    + ++  G   ++ +YN +I  +CKEG L+ AY L  
Sbjct: 441 YTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQS 500

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +ME  G   +  T  I+I  L + G    A 
Sbjct: 501 KMEDSGCSPNAITFKIIICALLEKGETDKAE 531



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 186/400 (46%), Gaps = 12/400 (3%)

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
           F + D      +RM     +P ++ +N ++    +       + L   +    I PD ++
Sbjct: 41  FENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFT 100

Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
            N L++C   LG+ + A  V   ++     P T T   ++ GLC       AL     L 
Sbjct: 101 LNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
             GF  + V+Y  LI G+CK G  R A  +L+ +      PN + Y TI+ C  + +   
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
               + S M  KG + +   Y  +I  F  +G+L EA  ++ +MV   +  D+  YNTL+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           +   KEGK++ A  +L  + K   + +  T+  LIDG         A+     +  +G  
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVT 332

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 410
            ++ +YN +++RL K  +++ A+N+++ M     V ++ TY+S++  LCK+ R+  A  L
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           +      G         ++++GL  +G   +A  + +K++
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 1/190 (0%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           +GV PDV +YN++I+  C+    +    +   M +  + P+ VTYNSLI G  ++  +S 
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           + DL+DEM + G   +V +YNSL++ L + G+ D+A  +   M    + P   T NI+L+
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448

Query: 156 G-LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           G LCK +   NA  +F+ L   G+ P + TYNI+I G CK G L  A  +  ++ DSG +
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCS 508

Query: 215 PNAITYTTIM 224
           PNAIT+  I+
Sbjct: 509 PNAITFKIII 518



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 1/203 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK  R+E+A  +  +  +  ++P+ VTYN LID  C+       + +++ M +
Sbjct: 339 NIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHD 398

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP-D 129
            G   +V+TYNSLI G  +N  L  ++ L+++M + GI PD+++ N L+H L   GK   
Sbjct: 399 RGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLK 458

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A  +FQD++     P   T+NI++ G CK    D A  +   ++  G  P  +T+ I+I
Sbjct: 459 NAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIII 518

Query: 190 KGLCKAGRLRTARWILKELGDSG 212
             L + G    A  +L E+   G
Sbjct: 519 CALLEKGETDKAEKLLCEMIARG 541



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK+ R+  A  +I +    G   +V+TYN LI+  C+    D    ++N+M++ GI PD
Sbjct: 380 LCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPD 439

Query: 77  VVTYNSLIAGAT-RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + T N L+ G   +   L  +  L  ++L+ G  P+V++YN +++   + G  DEA  + 
Sbjct: 440 MYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQ 499

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-----RGLQK 175
             M     +P   TF I++  L +   TD A ++      RGL K
Sbjct: 500 SKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLK 544


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 43/382 (11%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R+GV  ++  YN+LI A C+    +    +L+ M    + PD+ TYN+LI+   +  +  
Sbjct: 193 RIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHY 252

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L + D M   GI PD+ +YNSL+H   + G+  EA R+F+++   D TP   T+  ++
Sbjct: 253 EALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLI 310

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G C+    D ALR+   ++  G  P +VTYN +++ LC+ GR+R A  +L E+ +    
Sbjct: 311 DGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIE 370

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +T  T+                                   I A+ KIG +K A   
Sbjct: 371 PDNVTCNTL-----------------------------------INAYCKIGDMKSALKV 395

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +MV  G++LD  +Y  LI+ +CK  +++ A  LL  M   GF     T++ L+DG C 
Sbjct: 396 KNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCN 455

Query: 335 AGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
             N +   +L  E++ K G   +   Y  ++ R  K  ++D+A  +F  M+ K    DS 
Sbjct: 456 QQNEEAVLKLPDEFVRK-GLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSV 514

Query: 390 TYSSMVHNLCKAKRLPSASKLL 411
            Y+S+ +   K  +  +AS LL
Sbjct: 515 IYTSLAYAYWKLGKANAASDLL 536



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 156/339 (46%), Gaps = 33/339 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   CK+  +EKA+ ++ +     V PD+ TYN LI  YC+        ++ +RM  
Sbjct: 204 NVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMER 263

Query: 71  AGISPDVVTYNSLIAG-------------------ATRNSL--------------LSCSL 97
            GI PD+VTYNSLI G                   AT N +              L  +L
Sbjct: 264 EGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQAL 323

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
            L +EM   G+ P V +YNS++  L ++G+  +AN++  +M    + P   T N ++N  
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAY 383

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
           CK     +AL++   + + G   +  TY  LI G CK   +  A+ +L  + D+G +P+ 
Sbjct: 384 CKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSY 443

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            TY+ ++      +  +  L++     RKG   D   Y  +I  F K  ++  A      
Sbjct: 444 CTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSL 503

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           M   G   D V Y +L   Y K GK  AA  LLDEM K+
Sbjct: 504 MQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKR 542



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 168/360 (46%), Gaps = 9/360 (2%)

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS--YNSLMHCLFQLGKPDEANRVFQ 136
           T  SL+        LS    +L  ++ +   PD+ S  ++ L+          EA +VF+
Sbjct: 96  TAQSLLEKIAYRDFLSTQ-SVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFE 154

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P      ++LN L K+R TD   ++++ + + G    +  YN+LI   CK+G
Sbjct: 155 HMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSG 214

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A  +L E+      P+  TY T++    +   +   L +   M+R+G   D   Y 
Sbjct: 215 DVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYN 274

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           ++I  F K GR++EA    ++ + D    + V+Y TLI+ YC+   L+ A  L +EME Q
Sbjct: 275 SLIHGFCKEGRMREAMRLFKE-IRDATP-NHVTYTTLIDGYCRLNDLDQALRLREEMEAQ 332

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G      T+  ++  LC+ G I+ A   L  M++   + +    N +++   K G +  A
Sbjct: 333 GLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSA 392

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           + V   M       D FTY +++H  CK + +  A +LLLS L +G          +VDG
Sbjct: 393 LKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDG 452


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 203/398 (51%), Gaps = 14/398 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+VVTY +LI   CQ       + I  ++ + G+ P VVTY+SLI G  +   L   
Sbjct: 278 GISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSG 337

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L ++M++MG PPDV  Y  L+  L + G    A R     +   + P    FN +++G
Sbjct: 338 FALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDG 397

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+    D AL++FR +  +G  P++ T   L++     GRL+   ++   +   G  P+
Sbjct: 398 WCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPD 457

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR-LKEATDYM 275
           A+ + T+M    +N K  +GL++   M+R     D    C V+   +  G+ ++EA+ + 
Sbjct: 458 AVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPAD-IAVCNVVINLLFKGQSVEEASKFF 516

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
             ++   ++ DIV+YNT+I  YC   +L+ A  + + ++   F  +  T TILI  LCK 
Sbjct: 517 NNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKN 576

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-ESMEVK---DSFTY 391
            ++ GA   +          ++ +Y+ I+D L K G++D A N+F ++++ K   D   Y
Sbjct: 577 SDMDGALRIIS--------PSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAY 628

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
           + ++   CK  RL  A+ L    L++GV+     Q+A+
Sbjct: 629 AILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 190/403 (47%), Gaps = 18/403 (4%)

Query: 20  ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
            +++E A  ++   +  G  P+VVT+  LI+ +C+    D  + +   M + GI+PD++ 
Sbjct: 156 VDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIA 215

Query: 80  YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
           Y++LI G  +  +L     L  + L  G+  DV  ++S +    + G    A  V++ M+
Sbjct: 216 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRML 275

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
           C  ++P   T+ I++ GLC++     A  ++  + K G  P +VTY+ LI G CK G LR
Sbjct: 276 CQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLR 335

Query: 200 TARWILKELGDSGHAPNAITYTTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           +   + +++   G+ P+ + Y  ++    K        +  ++ L    R         +
Sbjct: 336 SGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVV----F 391

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I  + ++ R  EA      M   G++ D+ +  TL+ +   EG+L+    L   M K
Sbjct: 392 NSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFK 451

Query: 316 QGFECDKYTHTILIDGLCKAGNIK---GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
            G E D      L+D  CK  N+K   G +L  + M +    +++   N +++ L K   
Sbjct: 452 MGLEPDAVAFCTLMDAFCK--NMKPTIGLQL-FDLMQRNKIPADIAVCNVVINLLFKGQS 508

Query: 373 IDHAI----NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 411
           ++ A     N+ E     D  TY++M+   C  +RL  A+++ 
Sbjct: 509 VEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIF 551



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 157/324 (48%), Gaps = 16/324 (4%)

Query: 98  DLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEA----NRVFQDMICGDLTPCTATFNI 152
           D  D++   G +P  V ++  ++  LF+ G+  +A      V +     D+  C    N 
Sbjct: 94  DSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSC----NK 149

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L GL  ++  + A RM   +   G  P +VT+  LI G CK G +  A  + K +   G
Sbjct: 150 ILKGLSVDQ-IEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRG 208

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
            AP+ I Y+T++   F+     +G ++ S    KG   D   + + I  +VK G L  A 
Sbjct: 209 IAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAF 268

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           D  ++M+  G+  ++V+Y  LI   C++G++  A+ +  ++ K+G E    T++ LIDG 
Sbjct: 269 DVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGF 328

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF--- 389
           CK GN++      E M K+G+  ++  Y  +VD L K G + HA+  F    +  S    
Sbjct: 329 CKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALR-FSVKTLGQSIRPN 387

Query: 390 --TYSSMVHNLCKAKRLPSASKLL 411
              ++S++   C+  R   A K+ 
Sbjct: 388 VVVFNSLIDGWCRLNRCDEALKVF 411



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 137/310 (44%), Gaps = 8/310 (2%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   CK   +  A    +  +   + P+VV +N LID +C+    D    +   M   
Sbjct: 358 VLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIY 417

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           GI PDV T  +L+        L   L L   M +MG+ PD  ++ +LM    +  KP   
Sbjct: 418 GIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIG 477

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++F  M    +    A  N+++N L K +  + A + F  L +    P++VTYN +I G
Sbjct: 478 LQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICG 537

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C   RL  A  I + L  +   PNA+T T ++    +N      L I+S          
Sbjct: 538 YCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIII 597

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
             G C       K GR+ EAT+   Q +   +  D+V+Y  LI   CK G+L  A LL +
Sbjct: 598 D-GLC-------KRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYE 649

Query: 312 EMEKQGFECD 321
            M + G + D
Sbjct: 650 HMLRNGVKPD 659



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 212 GHAPNAIT-YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           G  P  ++ +  ++   FR  +    L+    +  +G+  D    C  I   + + +++ 
Sbjct: 103 GTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVS-CNKILKGLSVDQIEV 161

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A+  +  ++  G   ++V++ TLIN +CK G+++ A+ L   ME++G   D   ++ LID
Sbjct: 162 ASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLID 221

Query: 331 GLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           G  KAG +  G +L  + ++K G   ++  ++  +D   K G +  A +V++ M  +   
Sbjct: 222 GYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGIS 280

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            +  TY+ ++  LC+  R+  A  +    LK G+        +++DG    G  R  
Sbjct: 281 PNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSG 337


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 190/379 (50%), Gaps = 7/379 (1%)

Query: 39  LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
            PD VTY+ LI A+ +   +D+   + + M+E G+ P    Y +L+    +   +  +LD
Sbjct: 231 FPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALD 290

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           ++ EM + G    V++Y   +  L + G+ D+A RVF DMI     P     N ++N L 
Sbjct: 291 VIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILG 350

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL--CKAGRLRTARWILKELGDSGHAPN 216
           K    +  L++FR ++     P +VTYN +IK L  CKA     A W  K  G  G AP+
Sbjct: 351 KVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKG-CGIAPS 409

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           + TY+ ++    +  + +  L +L  M  KG+      YC++I +  K+ R + A +   
Sbjct: 410 SFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFL 469

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           ++  +        Y  +I  + K G+L  A  L +EMEK G + D Y +  L+ G+ +AG
Sbjct: 470 ELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAG 529

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A+  L  M++ G   +L ++N I++ L + G  D AI +F  M+      D+ +Y+
Sbjct: 530 MIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYN 589

Query: 393 SMVHNLCKAKRLPSASKLL 411
           +++  L  A     A+KL+
Sbjct: 590 TVLGCLSHAGLFEEAAKLM 608



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 5/368 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            K+ T LL I    + K +++EKA  +I +    G    V TY   I    +    D  Y
Sbjct: 269 AKIYTTLLGI----YFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAY 324

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
            +   M + G  PDVV  NSLI    +   L  +L L  +M      P+V +YN+++  L
Sbjct: 325 RVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKAL 384

Query: 123 FQLGKP-DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           F+   P  EA   F+ M    + P + T++I+++G CK    + AL +   + + GF P 
Sbjct: 385 FECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPC 444

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
              Y  LI  L K  R   A  +  EL ++    +A  Y  ++K   +  +    +++ +
Sbjct: 445 PAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFN 504

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M++ G   D + Y  +++  V+ G + EA   +  M  +G   D+ S+N ++N   + G
Sbjct: 505 EMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTG 564

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             + A  +  +M+    + D  ++  ++  L  AG  + A   +  MN  GF+ N   Y 
Sbjct: 565 VPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYT 624

Query: 362 CIVDRLGK 369
            I++ +GK
Sbjct: 625 SILEAVGK 632



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 38/294 (12%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAY--CQFVSFDAGYTILN 66
           L+N  +    K  RLE    +          P+VVTYN +I A   C+  + +A  +   
Sbjct: 341 LINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAA-SWFE 399

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M+  GI+P   TY+ LI G  + + +  +L LL+EM E G PP   +Y SL++ L ++ 
Sbjct: 400 KMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVK 459

Query: 127 KPDEAN---------------RVFQDMI-----CGDLT---------------PCTATFN 151
           + + AN               RV+  MI     CG L+               P    +N
Sbjct: 460 RYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYN 519

Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
            +++G+ +    D A  + R + ++G  P+L ++NI++ GL + G    A  +  ++  S
Sbjct: 520 ALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSS 579

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
              P+A++Y T++ C      ++   +++  M  KG+ ++   Y +++ A  K+
Sbjct: 580 IIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKV 633



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 7/330 (2%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF-NIMLNGLCKNRYTDNALRM 169
           D  S+ +L+H L + G   E  +  QDM+       ++ + + ++  L K +  + AL +
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCF 228
           F  ++     P   TYN +I  L + G L     I  E+ + G+  P+ +TY+ ++    
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFG 245

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           +   Y   + +   MK  G       Y T++  + K+ ++++A D +++M   G  L + 
Sbjct: 246 KLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVF 305

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +Y   I    K G+++ AY +  +M K G + D      LI+ L K G ++        M
Sbjct: 306 TYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKM 365

Query: 349 NKIGFDSNLEAYNCIVDRLGK-DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
                  N+  YN ++  L +       A + FE M+       SFTYS ++   CK  R
Sbjct: 366 ESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNR 425

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +  A  LL    + G     +A  ++++ L
Sbjct: 426 IEKALLLLEEMDEKGFPPCPAAYCSLINSL 455


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 209/480 (43%), Gaps = 42/480 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDV--VTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            CK  +++    I+ D I  G+      V YN+L+DA C+    D    +  RM E+ ++
Sbjct: 239 LCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVA 298

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P +VT+  LI G  R+        LL EM  +GI P+    N L+    + G   EA R+
Sbjct: 299 PSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRL 358

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC- 193
           F +M+  ++     T+N++   LCK    + A R+   +   G       +N ++ GL  
Sbjct: 359 FDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQ 418

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGL-------------- 237
           + GRL +   ++ E+   G  PN    T   K  C  R  +  +G+              
Sbjct: 419 RTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIA 478

Query: 238 -------------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                              E+L  M  KG   D   Y  +I    K  +++EA    + M
Sbjct: 479 TSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDM 538

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G + D   +N++I+ YC  GK+E A  LL +M+ +G + D  ++  +IDG CKA +I
Sbjct: 539 IRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDI 598

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSM 394
           + A  +L  +   G   N   YN ++   G++G I  AI V ++ME       + TY S+
Sbjct: 599 QKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSL 658

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +H +C A  +  A  +     K+ + +       ++ GL   G   EA     ++R   I
Sbjct: 659 MHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSI 718



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 204/441 (46%), Gaps = 40/441 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +++R  +  A++ +   LG+ P+ V  N LID +C+   F     + + M    +    V
Sbjct: 313 RSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAV 372

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ-LGKPDEANRVFQD 137
           TYN +     +   +  +  +L+EML  G+      +NS++  L Q  G+ +   R+  +
Sbjct: 373 TYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISE 432

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
           M+   + P  A        LC+ R    A+ ++  + + G    + T N LI GLC+   
Sbjct: 433 MVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKN 492

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           ++ A  +L+ + + G   + ITY  +++ C ++ K +  L++   M RKG+  D + + +
Sbjct: 493 MKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNS 552

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK------------------ 299
           +I A+  +G+++EA   + QM  +GVQ D+VSY T+I+ YCK                  
Sbjct: 553 IIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACG 612

Query: 300 -----------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
                             G +  A  +LD ME  G +    T+  L+  +C AG +  A+
Sbjct: 613 LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAK 672

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
              E   K   +  +  Y  ++  L K GK+D A+N FE M  +    +  TY+++++  
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732

Query: 399 CKAKRLPSASKLLLSCLKSGV 419
           CK+     ASKL    + SG+
Sbjct: 733 CKSGNNEEASKLFDEMVSSGI 753



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 152/338 (44%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  L+  C    C+  R ++A  I +  +  G+  ++ T N LI   C+  +      
Sbjct: 439 KPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATE 498

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  M   G+  D +TYN +I G  ++S +  +L L D+M+  G  PD + +NS++H   
Sbjct: 499 VLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYC 558

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            LGK +EA  +   M    + P   ++  +++G CK +    A      L   G  P  V
Sbjct: 559 DLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAV 618

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
            YN LI G  + G +  A  +L  +   G  P  +TY ++M              +    
Sbjct: 619 IYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQS 678

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           ++        GY  +I    KIG++ EA +Y E+M +  +  + ++Y TL+  YCK G  
Sbjct: 679 RKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNN 738

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           E A  L DEM   G   D  ++  L+ G  +  ++  A
Sbjct: 739 EEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKA 776



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 170/380 (44%), Gaps = 2/380 (0%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           +  RLE    +I + ++ G+ P+           CQ         I  +M E G+  ++ 
Sbjct: 419 RTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIA 478

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           T N+LI G      +  + ++L  M+  G+  D  +YN ++    +  K +EA ++  DM
Sbjct: 479 TSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDM 538

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I     P    FN +++  C     + AL +   ++  G  P++V+Y  +I G CKA  +
Sbjct: 539 IRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDI 598

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
           + A   L EL   G  PNA+ Y  ++    RN      + +L  M+  G       YC++
Sbjct: 599 QKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSL 658

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           +      G + EA    EQ   + +++ +V Y  +I   CK GK++ A    +EM  +  
Sbjct: 659 MHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSI 718

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
             +K T+T L+   CK+GN + A    + M   G   +  +YN +V    +   +D AI 
Sbjct: 719 PPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778

Query: 379 VFESMEVKDSFTYSSMVHNL 398
             ++ E+    T +  + N+
Sbjct: 779 --KAAEISSIMTQNDCLDNV 796



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 180/402 (44%), Gaps = 43/402 (10%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           SP V T N+L+    R   L  +  + DEM +   + P+ +SY S++  L ++GK D+  
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGF 249

Query: 133 RVFQDMICGDLTPCTAT--FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           ++  D+I   L        +N++++ LCK+   D A+R+   +++    P +VT+ ILI 
Sbjct: 250 KILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILIN 309

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL ++ R      +L+E+   G  PN +    ++    R   +   + +   M  K    
Sbjct: 310 GLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKS 369

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-NLYCKEGKLEAAYLL 309
               Y  +  A  K G ++ A   +E+M++ G+ +    +N+++  L  + G+LE+   L
Sbjct: 370 TAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRL 429

Query: 310 LDEMEKQGFE--------CDKY---------------------------THTILIDGLCK 334
           + EM K+G +        C K                            T   LI GLC+
Sbjct: 430 ISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCE 489

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
             N+KGA   L  M   G + +   YN ++    KD KI+ A+ + + M  K    D++ 
Sbjct: 490 GKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYM 549

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           ++S++H  C   ++  A  LL      GV+    +   ++DG
Sbjct: 550 FNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 159/353 (45%), Gaps = 17/353 (4%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI- 139
           N+ +  + R SL   ++D    +      P V + N+L+  L + G      +VF +M  
Sbjct: 163 NTCVTSSARGSL-RLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRD 221

Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL------QKHGFVPELVTYNILIKGLC 193
           C  +TP   ++  M+  LCK    D+  ++   L      Q  G VP    YN+L+  LC
Sbjct: 222 CKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVP----YNLLMDALC 277

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           K+GR+  A  +   + +S  AP+ +T+  ++    R+ ++     +L  M+  G T +  
Sbjct: 278 KSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEV 337

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
               +I    + G   EA    ++MV+  ++   V+YN +    CKEG++E A  +L+EM
Sbjct: 338 ICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEM 397

Query: 314 EKQGFECDKYTHTILIDGLC-KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
              G          ++ GL  + G ++     +  M K G   N         +L +  +
Sbjct: 398 LSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRR 457

Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              A+ ++  M  K    +  T ++++H LC+ K +  A+++L + +  G+ +
Sbjct: 458 HQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510


>gi|449449098|ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
 gi|449521427|ref|XP_004167731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 11/441 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  FC++  ++ AE I I   R G  PD+V+YN L+D YC          ++NR+R
Sbjct: 59  FNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVR 118

Query: 70  EAGIS-PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
              ++ PD+V +N L  G  +  + + +      M +  +P  + +Y + +    ++G  
Sbjct: 119 GCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLP-SIVTYGTFVDMFCKMGDM 177

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
              NR+F DM+   + P    F+ +++G CK    D A   F  +++    P   TY+ L
Sbjct: 178 KMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTL 237

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I G  K G L  A  + +++  +   PN   YT+I+   F+       ++ ++ M  +  
Sbjct: 238 IDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDI 297

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I+ F ++GR  ++ +  E +  +G+  D +    +++++ K G ++ A  
Sbjct: 298 KLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALN 357

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
               +  +GFE D  T + L+DGL K G ++ AR +L   N     +N   Y   +D L 
Sbjct: 358 AYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKEN-----ANEILYTVFIDALC 412

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K+G +D A  + + M     V D F Y+S +  LCK   L  A  +    ++  V     
Sbjct: 413 KEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLL 472

Query: 425 AQKAVVDGLRHSGCRREAKKI 445
              +++ GL   G   EAK++
Sbjct: 473 TYSSLIGGLAEKGLMIEAKQV 493



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 42/360 (11%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V  FCK   ++    + +D +++G++P++V ++ LID YC+  S D  +    RM+E  +
Sbjct: 168 VDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSV 227

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-- 131
            P+  TY++LI G +++ +L+ +  L ++ML   I P+   Y S++   F+ G  D+A  
Sbjct: 228 RPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIK 287

Query: 132 --NRVFQDMICGDLTPCTATFN-----------------IMLNGLCKNRYT--------- 163
             N++F   I  DLT  T   +                 +  NGL  +R           
Sbjct: 288 YINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHF 347

Query: 164 -----DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR-WILKELGDSGHAPNA 217
                  AL  ++ L   GF  ++VT + L+ GL K G L+ AR +++KE        N 
Sbjct: 348 KAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKE------NANE 401

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           I YT  +    +        +++  M   G+  D F Y + IA   K G L +A    ++
Sbjct: 402 ILYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKR 461

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           MV + V+ D+++Y++LI    ++G +  A  + D+M  +G   D  ++ ILI G    GN
Sbjct: 462 MVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGN 521



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 160/359 (44%), Gaps = 27/359 (7%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P  ++ N L+H L   G    + ++    +    TP  ++FN +++  C++     A  +
Sbjct: 19  PTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHI 78

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCF 228
           F  + + G  P++V+YN L+ G C + +++ A +++  + G   + P+ + +  +     
Sbjct: 79  FISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFA 138

Query: 229 RNRKYKLGLEILSAMKRKGYTFDG--FGYC--------TVIAAFVKIGRLKEATDYMEQM 278
           +             MK + + + G  + YC        T +  F K+G +K        M
Sbjct: 139 K-----------VYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMFLDM 187

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G+  ++V +++LI+ YCK G L+ A+   + M++     +++T++ LIDG  K G +
Sbjct: 188 MKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGML 247

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSM 394
             A    E M       N   Y  I+D   K G +D AI     M   ++K D   Y+ +
Sbjct: 248 ARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVI 307

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
           +    +  R   + +      K+G+   +    A++D    +G  +EA     KI +AK
Sbjct: 308 ISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALN-AYKILLAK 365



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 19/172 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  + +   CK   L+ AE +I +    G +PD   Y   I   C+  +    + +  RM
Sbjct: 403 LYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRM 462

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  + PD++TY+SLI G     L+  +  + D+ML  GI PD  SY+ L+      G  
Sbjct: 463 VQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIR-----GYH 517

Query: 129 DEAN-RVFQDMICGDLTPCT-------ATFNIMLNGLCKN------RYTDNA 166
           ++ N     D +   L+ C        A F I  +GL  N      RY ++A
Sbjct: 518 NQGNGAAISDFVLIILSSCNIRSAKWMALFEIPPDGLLSNFKSLAERYDESA 569



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 10/264 (3%)

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           ++ A   L  L  +   P   T   ++     +    L  ++L     KGYT     + +
Sbjct: 2   VKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNS 61

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +I+ F + G +K A      M   G   DIVSYN+L++ YC   +++ A  L++ +  +G
Sbjct: 62  IISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRV--RG 119

Query: 318 FEC---DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
            E    D     IL +G  K      A ++   M K    S +  Y   VD   K G + 
Sbjct: 120 CELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPS-IVTYGTFVDMFCKMGDMK 178

Query: 375 HAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
               +F  M     V +   +SS++   CKA  L  A +      +  VR  +     ++
Sbjct: 179 MGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLI 238

Query: 431 DGLRHSGCRREAKKIQSKIRMAKI 454
           DG    G    A  +  K+  A I
Sbjct: 239 DGCSKHGMLARADSLFEKMLSASI 262


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 146/283 (51%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+LE G PP ++ +N LMH   + G+   A  VF  +    L P   +FN ++NG  +  
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLG 185

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   R+   +   G  P++ TY++LI GLCK  ++  A  +L E+ D+G  PN +T+T
Sbjct: 186 DLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFT 245

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    +N K  L +EI   M  +G+  D   Y T+I    + G L +A D +E+M+  
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMK 305

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D ++Y TLI+  CKEG LE  + L   M ++    D+ T+T LI GLC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDA 365

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              L  M  +G   +   Y  I++   K G +  A  +   M+
Sbjct: 366 EKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQ 408



 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 152/281 (54%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P +  +N+L+  +C+         + + + +  + P VV++N+L+ G  R   L   
Sbjct: 131 GYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEG 190

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             L   M   G+ PDV++Y+ L++ L +  K DEAN +  +M+   L P   TF  +++G
Sbjct: 191 FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDG 250

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CKN   D A+ +++ +   GF+P+L+TYN LI GLC+ G L  AR +++E+   G  P+
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ITYTT++    +    ++  E+   M R+    D   Y  +I+   + GR  +A   + 
Sbjct: 311 KITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLR 370

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
           +M+T G++ D  +Y  ++N +CK G ++ A  LL EM++ G
Sbjct: 371 EMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNG 411



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 162/344 (47%), Gaps = 4/344 (1%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
           D++ ++ LM    + G   +A + F+      +     T   +L  L K RY       +
Sbjct: 65  DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFY 124

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           + + + G+ P L  +NIL+   CK G +R A+ +   +      P+ +++ T+M    R 
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                G  + SAM   G   D + Y  +I    K  ++ EA + + +M+ +G+  + V++
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
            TLI+ +CK GK++ A  +  +M  QGF  D  T+  LI GLC+ G++  AR  +E M  
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIM 304

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPS 406
            G   +   Y  ++D   K+G ++    + + M  +    D  TY++++  LC+  R   
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGD 364

Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           A K+L   L  G++        +++    +G  + A K+  +++
Sbjct: 365 AEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQ 408



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 113/209 (54%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK +++++A  ++ + +  G++P+ VT+  LID +C+    D    I  +M  
Sbjct: 210 SVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLS 269

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  PD++TYN+LI G  R   L  + DL++EM+  G+ PD  +Y +L+    + G  + 
Sbjct: 270 QGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEI 329

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              + + MI  ++     T+  +++GLC+     +A +M R +   G  P+  TY +++ 
Sbjct: 330 TFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMN 389

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAIT 219
             CK G ++TA  +L+E+  +G  P  +T
Sbjct: 390 EFCKTGDVKTASKLLREMQRNGPVPGVVT 418


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 181/393 (46%), Gaps = 22/393 (5%)

Query: 75  PDVVTYNSLIAGATRNSL--LSCSLDLLD----------------EMLEMGIPPDVWSYN 116
           PD+       AG  +N +  + C + L+D                E  E G    V++ N
Sbjct: 135 PDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAAN 194

Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
           SL+     LG  +E   V++ M    + P   TFN +LNGL  + + ++A R+F  ++  
Sbjct: 195 SLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECG 254

Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
              P++V+YN +IKG CKAG  + A     ++      P+ ITY T+++ C+    +   
Sbjct: 255 KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSC 314

Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 296
           L +   M+ +G       Y  VI    K GR  E +   E M   G + ++  Y  LI+ 
Sbjct: 315 LHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDA 374

Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
           Y K G +  A  L + M+ +GFE D  T+ ++++GLCK+G +  A  + E+        N
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVN 434

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              Y+ ++D LGK G++D A   FE M      +DS+ Y++++  L K+ ++  A  L  
Sbjct: 435 AMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFK 494

Query: 413 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
              K G          ++ GL       EA K+
Sbjct: 495 RMEKEGCDQTVYTYTILISGLFKEHRNEEALKL 527



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 186/405 (45%), Gaps = 4/405 (0%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           Y  LID       FD    I    +E G    V   NSLI       ++   L +   M 
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
           E GI P ++++N L++ L      + A RVF+ M CG + P   ++N M+ G CK   T 
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+  F  ++K    P+ +TY  LI+     G   +   + +E+ + G       Y+ ++
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVI 337

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               ++ +   G  +   M +KG   +   Y  +I A+ K G + EA +  E+M  +G +
Sbjct: 338 GGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFE 397

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
            D V+Y  ++N  CK G+L+ A    +  +      +   ++ LIDGL KAG +  A   
Sbjct: 398 PDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKF 457

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCK 400
            E M + G   +   YN ++D L K GK++ A+ +F+ ME     +  +TY+ ++  L K
Sbjct: 458 FEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFK 517

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             R   A KL    +  G+    ++ +A+  GL  SG    A KI
Sbjct: 518 EHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKI 562



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 202/418 (48%), Gaps = 7/418 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G L  V   N LI ++      +    +  RM+E+GI P + T+N L+ G   NS+   S
Sbjct: 185 GFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLV-NSMFIES 243

Query: 97  LDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            + + E++E G I PDV SYN+++    + G   +A   F DM   +L P   T+  ++ 
Sbjct: 244 AERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQ 303

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                   D+ L +++ +++ G       Y+++I GLCK GR      + + +   G   
Sbjct: 304 ACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKA 363

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N   YT ++    +N      + +   MK +G+  D   Y  ++    K GRL EA +Y 
Sbjct: 364 NVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYF 423

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E    + V ++ + Y++LI+   K G+++ A    +EM ++G   D Y +  LID L K+
Sbjct: 424 EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKS 483

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           G ++ A +  + M K G D  +  Y  ++  L K+ + + A+ +++ M  K     + ++
Sbjct: 484 GKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASF 543

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++   LC + ++  A K+L      GV I ++A + +++ L  +G   +A K+   I
Sbjct: 544 RALSVGLCLSGKVARACKILDELAPMGV-IPETAFEDMINVLCKAGRTEQACKLADGI 600



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 1/372 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +CKA   +KA     D  +  + PD +TY  LI A     +FD+   +   M E
Sbjct: 264 NTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEE 323

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+      Y+ +I G  ++        + + M + G   +V  Y +L+    + G  +E
Sbjct: 324 RGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNE 383

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+ M      P   T+ +++NGLCK+   D A+  F   + +      + Y+ LI 
Sbjct: 384 AINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLID 443

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GL KAGR+  A    +E+ + G   ++  Y  ++    ++ K +  L +   M+++G   
Sbjct: 444 GLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQ 503

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
             + Y  +I+   K  R +EA    + M+  G+     S+  L    C  GK+  A  +L
Sbjct: 504 TVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKIL 563

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           DE+   G    +     +I+ LCKAG  + A    + +   G +        +++ L K 
Sbjct: 564 DELAPMGV-IPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKA 622

Query: 371 GKIDHAINVFES 382
           G  D A+ +  S
Sbjct: 623 GNADLAMKLMHS 634



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 4/216 (1%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           I    K KG+    F   ++I +F  +G ++E      +M   G++  + ++N L+N   
Sbjct: 177 IFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLV 236

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
               +E+A  + + ME      D  ++  +I G CKAGN K A      M K   + +  
Sbjct: 237 NSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKI 296

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            Y  ++     +G  D  +++++ ME +        YS ++  LCK  R    S +  + 
Sbjct: 297 TYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM 356

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            K G +   +   A++D    +G   EA  +  +++
Sbjct: 357 NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMK 392


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 190/409 (46%), Gaps = 37/409 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  FCKA ++++A  ++ +    G+  D++ Y  LI  +C     D G  + + + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G SP  +TYN+LI G  +   L  + ++ + M+E G+ P+V++Y  L+  L  +GK  EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN----- 186
            ++   M+  D  P   T+NI++N LCK+    +AL +   ++K    P+ +TYN     
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396

Query: 187 --------------------------------ILIKGLCKAGRLRTARWILKELGDSGHA 214
                                            LI GLCK  RL  A  I   L +   A
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA 456

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            + +T   ++    ++      +E+   +       +   Y T+I  F K G L  A   
Sbjct: 457 GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGL 516

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           + +M    +   +  YN L++  CK+G L+ A+ L +EM++     D  +  I+IDG  K
Sbjct: 517 LCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLK 576

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           AG+IK A   L  M+  G   +L  Y+ +++R  K G +D AI+ F+ M
Sbjct: 577 AGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 198/415 (47%), Gaps = 6/415 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FC+   LEKA  +  +    G    +VT+ +LIDA+C+    D    +L  M+ 
Sbjct: 181 NTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKH 240

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  D++ Y SLI G      L     L DE+LE G  P   +YN+L+    +LG+  E
Sbjct: 241 KGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKE 300

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A+ +F+ M+   + P   T+  +++GLC    T  AL++   + +    P +VTYNI+I 
Sbjct: 301 ASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIIN 360

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYT 249
            LCK   +  A  I++ +      P+ ITY +++   C +    +    +   +K   YT
Sbjct: 361 KLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 250 -FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   +  +I    K  RL +A D  + +V      DIV+ N L+N   K G +  A  
Sbjct: 421 DPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAME 480

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  ++       +  T+T +IDG CK G +  A+  L  M       ++  YNC++  L 
Sbjct: 481 LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540

Query: 369 KDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           K G +D A  +FE M+  DSF    +++ M+    KA  + SA  LL+    +G+
Sbjct: 541 KKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGL 595



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 182/379 (48%), Gaps = 2/379 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  FCK  RL++A  I    +  GV P+V TY  LID  C          +LN M +
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P+VVTYN +I    ++SL++ +L++++ M +    PD  +YNSL+  L   G  DE
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDE 405

Query: 131 ANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           A+++   M+       P   +FN +++GLCK      AL ++  L +     ++VT NIL
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNIL 465

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +    K+G +  A  + K++ +S   PN+ TYTT++    +     +   +L  M+    
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
               F Y  ++++  K G L +A    E+M  D    D++S+N +I+   K G +++A  
Sbjct: 526 PPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAES 585

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           LL  M   G   D +T++ LI+   K G +  A    + M   GF+ +    + ++    
Sbjct: 586 LLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCI 645

Query: 369 KDGKIDHAINVFESMEVKD 387
             G+ D      + +  KD
Sbjct: 646 SQGETDKLTEFVKKLVDKD 664



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 205/420 (48%), Gaps = 6/420 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           + V+ + L++ + Q       + +L  M + G + +V  YN L+ G  RN     ++ LL
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            EM +  + PDV SYN+++    +  + ++A ++  +M     +    T+ I+++  CK 
Sbjct: 166 REMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA 225

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D A+ + + ++  G   +L+ Y  LI+G C  G L   + +  E+ + G +P AITY
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
            T+++   +  + K   EI   M  +G   + + Y  +I     +G+ KEA   +  M+ 
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
              + ++V+YN +IN  CK+  +  A  +++ M+K+    D  T+  L+ GLC  G++  
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDE 405

Query: 341 AR--LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSM 394
           A   L+L   +    D ++ ++N ++  L K  ++  A++++    E +   D  T + +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNIL 465

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
           +++  K+  +  A +L      S +         ++DG   +G    AK +  K+R++++
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 155/335 (46%), Gaps = 3/335 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +   CK + +  A  I+    +    PD +TYN L+   C     D    +L  M +
Sbjct: 356 NIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLK 415

Query: 71  AG--ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
                 PDV+++N+LI G  + + L  +LD+ D ++E     D+ + N L++   + G  
Sbjct: 416 DSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDV 475

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           ++A  +++ +    + P + T+  M++G CK    + A  +   ++     P +  YN L
Sbjct: 476 NKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCL 535

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LCK G L  A  + +E+      P+ I++  ++    +    K    +L  M   G 
Sbjct: 536 LSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGL 595

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D F Y  +I  F+K+G L EA  + ++M+  G + D    ++++     +G+ +    
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTE 655

Query: 309 LLDEMEKQGFECDKYTHTILIDGLC-KAGNIKGAR 342
            + ++  +    DK     ++D +C  +GN+  A+
Sbjct: 656 FVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAK 690


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 152/287 (52%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML 185

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF  +++G CKN   D
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +      P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 306 NGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLK 365

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK G +     LL EM++ G      T+ +L++G
Sbjct: 366 PDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 153/308 (49%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 104 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 163

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   + G  DE   +   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 164 LMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 223

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++     +P+ ITY T++    +    K   
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 283

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D   Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  
Sbjct: 284 HLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGX 343

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++      L+ M + G   ++
Sbjct: 344 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSV 403

Query: 358 EAYNCIVD 365
             YN +++
Sbjct: 404 VTYNVLMN 411



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 1/298 (0%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRX 171

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D    +   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+
Sbjct: 172 GDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +  + D   Y T+I    K G LK+A   +++M  
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 291

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D ++Y TLIN  CKEG L++A+     M ++    D+  +T LI G C+ G    
Sbjct: 292 KGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVD 351

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 352 AEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQ-RDGHVPSVVTYNV 408



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 4/273 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           FNI+++  CK+     A  +F  + K G  P +V+YN L+ G  + G L     +   + 
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXML 185

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            SG  P+  TY+ ++    +  K     E+   M  KG   +G  + T+I    K GR+ 
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM++  +  D+++YNTLI   CK+G L+ A+ L+DEM  +G + DK T+T LI
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 385
           +G CK G++  A  H + M +     +  AY  ++    ++G+ +D    + E + V   
Sbjct: 306 NGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLK 365

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            D+ TY+ +++  CK   +   SKLL    + G
Sbjct: 366 PDARTYTMIINEFCKXGDVWXGSKLLKEMQRDG 398



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 94  VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + S M   G   D + Y  +I    K  ++ +A 
Sbjct: 154 LRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDAN 213

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  +++   K+G +D A    + M  +    D 
Sbjct: 274 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDE 333

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++   C+  R   A K+L   L  G++
Sbjct: 334 VAYTALISGXCQEGRSVDAEKMLREMLSVGLK 365



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 89/174 (51%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   + PD++TYN LI   C+       + +++ M   G+ PD 
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 298

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+    Q G+  +A ++ ++
Sbjct: 299 ITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLRE 358

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P   T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 359 MLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 72/146 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD +TY  LI+  C+    D+ +    RM +
Sbjct: 267 NTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQ 326

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD  +Y  +++   + G    
Sbjct: 327 ENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWX 386

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 387 GSKLLKEMQRDGHVPSVVTYNVLMNG 412


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 202/393 (51%), Gaps = 5/393 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L   E    D +  G  PDVVT++ +I+  C+      G  +L  M E  + P+ VTY +
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           L+    + ++   +L L  +M+  GIP D+  Y  LM  LF+ G   EA + F+ ++  +
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   T+  +++GLCK     +A  +   + +   +P +VTY+ +I G  K G L  A 
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L+++ D    PN  TY T++   F+  K ++ +E+   M+  G   + +    ++   
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            +IGR+KE    ++ MV+ GV LD ++Y +LI+++ K G  EAA    +EM+++G   D 
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            ++ +LI G+ K G + GA    + M + G + ++  +N +++   K G  +  + +++ 
Sbjct: 540 VSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 598

Query: 383 ME---VKDSFTYSSMVHN-LCKAKRLPSASKLL 411
           M+   +K S    ++V   LC+  ++  A  +L
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 14/390 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ + +FCK  RL  A +++ + +   +  D VTYN +I   C+    D  Y  L+ M 
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + GI PD V+YN+LI G  +      +  L+DE+ E+    ++ ++  L+   + L   +
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIE 244

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA   ++DM+     P   TF+ ++N LCK         + R +++    P  VTY  L+
Sbjct: 245 EA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 301

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L KA   R A  +  ++   G   + + YT +M   F+    +   +    +      
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV 361

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++    K G L  A   + QM+   V  ++V+Y+++IN Y K+G LE A  L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L +ME Q    + +T+  +IDGL KAG  + A    + M  IG + N    + +V+ L +
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMV 395
            G+I     + + M  K    D   Y+S++
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 200/429 (46%), Gaps = 36/429 (8%)

Query: 36  LGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
            GV+PD   +N LI  +    +  D    I ++M   G+SPDV   N LI    +   LS
Sbjct: 87  FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 146

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++ LL   +   I  D  +YN+++  L + G  DEA +   +M+   + P T ++N ++
Sbjct: 147 FAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203

Query: 155 NGLCK-----------------NRYTDNAL-----------RMFRGLQKHGFVPELVTYN 186
           +G CK                 N  T   L             +R +   GF P++VT++
Sbjct: 204 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 263

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I  LCK G++     +L+E+ +    PN +TYTT++   F+   Y+  L + S M  +
Sbjct: 264 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 323

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  ++    K G L+EA    + ++ D    ++V+Y  L++  CK G L +A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             ++ +M ++    +  T++ +I+G  K G ++ A   L  M       N   Y  ++D 
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K GK + AI + + M +    ++++   ++V++L +  R+     L+   +  GV + 
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503

Query: 423 KSAQKAVVD 431
           +    +++D
Sbjct: 504 QINYTSLID 512



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 36/412 (8%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMGIPPDVWSYNSLMHCLF 123
           L+ M   G+ PD   +NSLI     N L+   + L+  +M+  G+ PDV++ N L+H   
Sbjct: 81  LSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC 140

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+   A  + ++ +   ++  T T+N +++GLC++   D A +    + K G +P+ V
Sbjct: 141 KVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 197

Query: 184 TYNILIKGLCKAGRLRTARWILKELGD----------------------------SGHAP 215
           +YN LI G CK G    A+ ++ E+ +                            SG  P
Sbjct: 198 SYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+++I+    +  K   G  +L  M+      +   Y T++ +  K    + A    
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            QMV  G+ +D+V Y  L++   K G L  A      + +     +  T+T L+DGLCKA
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G++  A   +  M +     N+  Y+ +++   K G ++ A+++   ME    V + FTY
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            +++  L KA +   A +L       GV        A+V+ L+  G  +E K
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 1/333 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  DVV+YN+LI    +F    A +     MRE GI PD+ T+N ++    +       
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L L D+M   GI P + S N ++  L + GK +EA  +   M+  ++ P   T+ I L+ 
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K++  D   +    L  +G       YN LI  LCK G  + A  ++ ++   G  P+
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+ ++M   F     +  L   S M   G + +   Y T+I      G +KE   ++ 
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M + G++ D  +YN LI+   K G ++ +  +  EM   G      T+ +LI      G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +  AR  L+ M K G   N   Y  ++  L K
Sbjct: 833 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 202/468 (43%), Gaps = 40/468 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  L  AE II   +   V+P+VVTY+ +I+ Y +    +   ++L +M +  + P+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY ++I G  +      +++L  EM  +G+  + +  ++L++ L ++G+  E   + +
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   +T     +  +++   K    + AL     +Q+ G   ++V+YN+LI G+ K G
Sbjct: 494 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 553

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A W  K + + G  P+  T+  +M    +    +  L++   MK  G         
Sbjct: 554 KV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN 612

Query: 257 TVIAAFVKIGRLKEATDYMEQM-----------------------------------VTD 281
            V+    + G+++EA   + QM                                   ++ 
Sbjct: 613 IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSY 672

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++L    YNTLI   CK G  + A +++ +ME +GF  D  T   L+ G     +++ A
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
                 M + G   N+  YN I+  L   G I         M+ +    D FTY++++  
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             K   +  +  +    +  G+    S    ++    + G   +A+++
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAREL 840



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   C+  ++E+A  I+   + + + P++ TY + +D   +    DA +     +  
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI      YN+LIA   +  +   +  ++ +M   G  PD  ++NSLMH  F      +
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   +  M+   ++P  AT+N ++ GL          +    ++  G  P+  TYN LI 
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G ++ +  I  E+   G  P   TY  ++       K     E+L  M ++G + 
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851

Query: 251 DGFGYCTVIAAFVKI 265
           +   YCT+I+   K+
Sbjct: 852 NTSTYCTMISGLCKL 866



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 35/238 (14%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           I S M   G + D F    +I +F K+GRL  A   +   V   + +D V+YNT+I+  C
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLC 172

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI------- 351
           + G  + AY  L EM K G   D  ++  LIDG CK GN   A+  ++ ++++       
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232

Query: 352 ---------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
                                GFD ++  ++ I++RL K GK+     +   ME      
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           +  TY+++V +L KA     A  L    +  G+ +       ++DGL  +G  REA+K
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 198/396 (50%), Gaps = 10/396 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           P+VVTY  +I A C+         +   M+EAG+ P++ TYN+L++   +   +  +L  
Sbjct: 206 PNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
             ++L+ G+ P+   + +L+  L Q  +  EA  +F DM   ++ P    +N +++G  +
Sbjct: 266 YYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFR 325

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
           + Y   AL  F+ + + G  P+  T +I+++GLC  G+++ A   L+ +  SG A NA  
Sbjct: 326 SGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAA 385

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y  ++    ++      L   + M   G   +   Y ++I    K G ++ A     +MV
Sbjct: 386 YNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMV 445

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
             GV+ ++V+Y  LI+ + K G ++AA+ L  EME++G   +  T ++L+DGLC+   ++
Sbjct: 446 AKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQ 505

Query: 340 GA-RLHLEYMNKIGFDSNLE-----AYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
            A R  +EY  +   + N        Y  ++  L  DG+ + A + F  M     V D F
Sbjct: 506 DAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRF 565

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           TY+ ++  LC    + +A  L    +K GV+  K A
Sbjct: 566 TYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 188/390 (48%), Gaps = 5/390 (1%)

Query: 27  EAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG 86
           EA+ + G RL  LP +   N ++D   +       + + + M   G+ P VVTYN+LI  
Sbjct: 124 EALSVFG-RLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINA 182

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
                 ++ + ++ D+M+   I P+V +Y +++  L +     +A  +F +M    + P 
Sbjct: 183 CRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPN 242

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
             T+N +++   K     +AL  +  L K G VP  V +  LI GLC+A R+  A+ I  
Sbjct: 243 LYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFL 302

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           ++     AP    Y +++   FR+   +  L     + RKG   D F    V+      G
Sbjct: 303 DMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGG 362

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +++ AT ++E M   G+ L+  +YN LI+ YCK G L+ A +    M + G E +  T++
Sbjct: 363 QMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYS 422

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 386
            LIDG  K G ++ A      M   G + N+  Y  ++    K+G +D A  + + ME K
Sbjct: 423 SLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEK 482

Query: 387 ----DSFTYSSMVHNLCKAKRLPSASKLLL 412
               ++ T S +V  LC+  R+  A + ++
Sbjct: 483 GIYSNAITVSVLVDGLCRENRVQDAVRFIM 512



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 6/348 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  + +  K + ++ A     D ++ G++P+ V +  LID  CQ         I   M  
Sbjct: 247 NALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPR 306

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             ++P V  YNSLI GA R+     +L    E++  G+ PD ++ + ++  L   G+   
Sbjct: 307 YEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQV 366

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R  + M    +    A +N++++  CK+   D AL     + + G  P +VTY+ LI 
Sbjct: 367 ATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLID 426

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G +  A  I  E+   G  PN +TYT ++    +N        +   M+ KG   
Sbjct: 427 GHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYS 486

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYM------EQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
           +      ++    +  R+++A  ++      ++   +    + V+Y TLI     +G+  
Sbjct: 487 NAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYN 546

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
            A      M   G   D++T+T++I GLC  G +  A +    M K+G
Sbjct: 547 EACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 594



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 129/267 (48%), Gaps = 6/267 (2%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           ++A A   + IR G+ PD  T ++++   C           L  M+++GI+ +   YN L
Sbjct: 330 QEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVL 389

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           I    ++  L  +L     M E+G+ P+V +Y+SL+    + G+ + A  ++ +M+   +
Sbjct: 390 IDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGV 449

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-R 202
            P   T+  +++G  KN   D A  + + +++ G     +T ++L+ GLC+  R++ A R
Sbjct: 450 EPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVR 509

Query: 203 WILKELGD--SGHAP---NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
           +I++  G   S   P   N++TY T++   + + +Y       S M+  G   D F Y  
Sbjct: 510 FIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTL 569

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQ 284
           VI     +G +  A      MV  GV+
Sbjct: 570 VIRGLCMLGYVLNAMMLYADMVKVGVK 596



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 7/299 (2%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
               +++  L +    D AL +F  L++   +P L   N ++ GL KA  L     +  E
Sbjct: 107 PALGVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDE 163

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +   G  P+ +TY T++  C          E+   M  +    +   Y T+I A  +   
Sbjct: 164 MLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDC 223

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           + +A     +M   G++ ++ +YN L++ + K   ++ A +   ++ K G   +    T 
Sbjct: 224 IGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTT 283

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
           LIDGLC+A  I  A+     M +      +  YN ++    + G    A+  F+ +  K 
Sbjct: 284 LIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKG 343

Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
              D FT S +V  LC   ++  A++ L    +SG+ +  +A   ++D    SG   EA
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEA 402



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 6/218 (2%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    N+ +  +CK+  L++A         +GV P+VVTY+ LID + +    +    I
Sbjct: 381 LNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAI 440

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
              M   G+ P+VVTY +LI G  +N  +  +  L  EM E GI  +  + + L+  L +
Sbjct: 441 YTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCR 500

Query: 125 LGKPDEANRV---FQDMICGDLTPCTA---TFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
             +  +A R    +      +  P  A   T+  ++ GL  +   + A   F  ++  G 
Sbjct: 501 ENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGM 560

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           VP+  TY ++I+GLC  G +  A  +  ++   G  P 
Sbjct: 561 VPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 220/480 (45%), Gaps = 41/480 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ + +  KAN L K+  +  D    GV PDV T+   I+A+C+         +  +M  
Sbjct: 225 NLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEG 283

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P+VVTYN++I G  ++     +L   D M+   + P V +Y  L+  L +L   +E
Sbjct: 284 LGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEE 343

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           AN V  +M      P    FN +++G C+      ALR+   +   G  P  VT+N L++
Sbjct: 344 ANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQ 403

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM------- 243
           G C++ ++  A  +L  +  SG + N    + ++        +   L+I++ +       
Sbjct: 404 GFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRV 463

Query: 244 -------------KRKGYT-----------FDGFGYCTVIA-----AFVKIGRLKEATDY 274
                        K +G++             G    TV +        + G ++E  + 
Sbjct: 464 SDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEV 523

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           ++QM+  G+ LD +SYNTLI   CK GK+E A+ L +EM +Q F+ D YT+  L+ GL  
Sbjct: 524 LKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLAD 583

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
            G I      L    + GF  N+  Y  +++   K  +I+ A+  F++++ +     S  
Sbjct: 584 MGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVV 643

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           Y+ ++   C+   +  A KL  +    G+    +   +++ G+   G   EAK+I  ++R
Sbjct: 644 YNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMR 703



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 171/333 (51%), Gaps = 8/333 (2%)

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G++ + VT N+L+ G      +    ++L +MLE G+  D  SYN+L+    + GK +EA
Sbjct: 496 GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEA 555

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
            ++ ++M+  +  P T T+N ++ GL      D+  R+    +++GFVP + TY +L++G
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEG 615

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            CKA R+  A    K L       +++ Y  ++    R        ++  AMK +G    
Sbjct: 616 YCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPT 675

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y ++I     IGR+ EA +  E+M  +G+  ++  Y  LI  +CK G+++    +L 
Sbjct: 676 CATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILL 735

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM   G   +K T+TI+IDG CK GN+K AR  L  M + G   +   YN +     K+ 
Sbjct: 736 EMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKER 795

Query: 372 KI------DHAINVFESMEVKDSFTYSSMVHNL 398
           ++      DH  N+   + +++  TY++++H L
Sbjct: 796 ELTVTLQSDHKSNI--GLPLEEEITYNTLIHKL 826



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 215/508 (42%), Gaps = 75/508 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FCK  R+  A  +      LGV P+VVTYN +ID   +   F+      +RM  + ++P 
Sbjct: 265 FCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPS 324

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY  LI+G  +  +   + ++L EM  MG  P+   +N+L+    + G   EA RV  
Sbjct: 325 VVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRD 384

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF--------------------RGLQKH 176
           +M    + P   TFN +L G C++   + A ++                     R +++ 
Sbjct: 385 EMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERS 444

Query: 177 GFVP------ELVTYNI---------LIKGLCK-AGRLRTARWILKELGDSGHAPNAITY 220
           GFV       +L++ NI         L+ GLCK  G         K     G A N +T 
Sbjct: 445 GFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTS 504

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++         +   E+L  M  KG   D   Y T+I    K G+++EA    E+MV 
Sbjct: 505 NALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQ 564

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA----- 335
              Q D  +YN L+      GK++  + LL E ++ GF  + YT+ +L++G CKA     
Sbjct: 565 QEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIED 624

Query: 336 ------------------------------GNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
                                         GN+  A    + M   G       Y+ ++ 
Sbjct: 625 AVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIH 684

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            +   G++D A  +FE M     + + F Y++++   CK  ++     +LL    +G+R 
Sbjct: 685 GMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRP 744

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            K     ++DG    G  +EA+++ +++
Sbjct: 745 NKITYTIMIDGYCKLGNMKEARELLNEM 772



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 197/443 (44%), Gaps = 44/443 (9%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           K    E+A  ++++   +G  P+ V +N LID YC+         + + M   G+ P+ V
Sbjct: 337 KLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFV 396

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP--DVWSYNSLMHCLFQLGKPDEANRVFQ 136
           T+N+L+ G  R++ +  +  +L  +L  G+    DV SY  ++H L +      A ++  
Sbjct: 397 TFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSY--VIHRLMERSGFVSALKIVT 454

Query: 137 DMICGD-------LTPC-----------------------------TATFNIMLNGLCKN 160
            ++ G+       LTP                              T T N +L+GLC+ 
Sbjct: 455 KLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCER 514

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              +    + + + + G + + ++YN LI G CK G++  A  + +E+      P+  TY
Sbjct: 515 GNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTY 574

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             +MK      K      +L   K  G+  + + Y  ++  + K  R+++A  + + +  
Sbjct: 575 NFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDY 634

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           + V+L  V YN LI  YC+ G +  A+ L D M+ +G      T++ LI G+C  G +  
Sbjct: 635 EKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDE 694

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A+   E M   G   N+  Y  ++    K G++D   ++   M       +  TY+ M+ 
Sbjct: 695 AKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMID 754

Query: 397 NLCKAKRLPSASKLLLSCLKSGV 419
             CK   +  A +LL   +++G+
Sbjct: 755 GYCKLGNMKEARELLNEMIRNGI 777



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 34/310 (10%)

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           PC  T N++L+ L K      +  +F  L   G  P++ T+   I   CK GR+  A  +
Sbjct: 219 PCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDL 277

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
             ++   G  PN +TY  ++   F++ +++  L     M R         Y  +I+  +K
Sbjct: 278 FCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMK 337

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
           +   +EA + + +M + G   + V +N LI+ YC++G +  A  + DEM  +G + +  T
Sbjct: 338 LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVT 397

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              L+ G C++  ++ A   L Y+   G   N++   C                      
Sbjct: 398 FNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDV--C---------------------- 433

Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
                  S ++H L +     SA K++   L   +R+  S    +V GL    C   ++ 
Sbjct: 434 -------SYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGL--CKCEGHSEA 484

Query: 445 IQSKIRMAKI 454
           I+   ++A +
Sbjct: 485 IELWFKLAAV 494


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 178/369 (48%), Gaps = 4/369 (1%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
           VTY +LIDA C+  + D    +L  M E  ISP+VVT++S+I G  +  LL  + +    
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           M E GI P+V +Y +L+   F+    D A  V+ DM+C  +       + ++NGL +N  
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGK 499

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A+ +F+     G   + V Y  LI GL KAG + TA    +EL D    P+A+ Y  
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
            + C     K+K    IL+ M+  G   D   Y T+I +  + G   +A   + +M    
Sbjct: 560 FINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ ++++YNTL+      G +E A  LL+EM   GF     TH  ++    ++  +    
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNL 398
              E+M   G  +++  YN ++  L   G    A  V E M       D+ T+++++   
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 399 CKAKRLPSA 407
           CK+  L +A
Sbjct: 740 CKSSHLDNA 748



 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 9/418 (2%)

Query: 26  AEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP-DVVTYNSLI 84
           A A++ +  + GV  D VT N L+   C+    DA   + +R    GI   DV+ +N+LI
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLI 176

Query: 85  AGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLT 144
           AG  R      +L + D M   G+P DV  YN+L+    + G+ D A  V   M    + 
Sbjct: 177 AGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 145 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 204
           P  AT+   +   C+ +  + A  ++ G+ ++G + ++VT + L+ GLC+ GR   A  +
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
            +E+   G  PN +TY T++    +  + K  L +L  M  +G   D   Y  ++    K
Sbjct: 297 FREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGK 356

Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
            G+  E  D +   ++D + L+ V+Y  LI+  CK   ++ A  +L EME++    +  T
Sbjct: 357 QGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVT 416

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF---- 380
            + +I+G  K G +  A  +   M + G + N+  Y  ++D   K    D A+ V+    
Sbjct: 417 FSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDML 476

Query: 381 -ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            E +EV + F   S+V+ L +  ++  A  L      SG+ +       ++DGL  +G
Sbjct: 477 CEGVEV-NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 205/454 (45%), Gaps = 46/454 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGY-------------------TILNRMRE------- 70
           G+ P+VVTY  LID + +F   DA                     +++N +R+       
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEA 503

Query: 71  ---------AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
                    +G+S D V Y +LI G  +   +  +     E+++  + PD   YN  ++C
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L  LGK  EA  +  +M    L P  +T+N M+   C+   T  AL++   ++     P 
Sbjct: 564 LCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           L+TYN L+ GL   G +  A+++L E+  +G +P+++T+  +++ C ++R+  + L+I  
Sbjct: 624 LITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHE 683

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   D   Y T++      G  ++AT  +E+M+  G+  D +++N LI  +CK  
Sbjct: 684 WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
            L+ A+    +M  Q    +  T   L+ GL   G I  A   L  M K G + N   Y+
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            +V   GK      A+ ++  M     V    TY++++ +  KA  +  A +L     K 
Sbjct: 804 ILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKR 863

Query: 418 GVR-------ILKSAQKAVVDGLRHSGCRREAKK 444
           GV        IL S    + +G     C ++ K+
Sbjct: 864 GVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 203/450 (45%), Gaps = 6/450 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V  FC+A +++ A  ++      GV P+V TY   I  YC+    +  + +   M  
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  DVVT ++L+AG  R+   S +  L  EM ++G  P+  +Y +L+  L + G+  E
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKE 327

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
              +  +M+   +     T+  +++ L K   TD      R           VTY +LI 
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLID 387

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCKA  +  A  +L E+ +   +PN +T+++++    +        E    MK +G   
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y T+I  F K      A +    M+ +GV+++    ++L+N   + GK+E A  L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +    G   D   +T LIDGL KAG++  A +   E M++     +   YN  ++ L  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR-NMLPDAVVYNVFINCLCI 566

Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            GK   A ++   M       D  TY++M+ + C+      A KLL     S ++     
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              +V GL  +G   +AK + +++  A  S
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFS 656



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 206/474 (43%), Gaps = 39/474 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            + +   CKA+ +++AE ++++     + P+VVT++ +I+ + +    D        M+E
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P+VVTY +LI G  +      +L++  +ML  G+  + +  +SL++ L Q GK +E
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEE 502

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F+D     L+     +  +++GL K      A +  + L     +P+ V YN+ I 
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LC  G+ + A+ IL E+ + G  P+  TY T++    R  +    L++L  MK      
Sbjct: 563 CLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 251 DGFGYCTVIAAFVKIGRLKEAT-----------------------------------DYM 275
           +   Y T++A     G +++A                                    D  
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           E M+  G+  DI  YNTL+ + C  G    A ++L+EM   G   D  T   LI G CK+
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
            ++  A      M       N+  +N ++  L   G+I  A  V   ME      ++ TY
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             +V    K      A +L    +  G     S   A++     +G   +AK++
Sbjct: 803 DILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 205/448 (45%), Gaps = 4/448 (0%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C+      A ++       G+  DVV YN L+  +C+    DA   +L+ M+E
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKE 232

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           AG+ P+V TY   I    R   +  + DL + M+  G+  DV + ++L+  L + G+  E
Sbjct: 233 AGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSE 292

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M      P   T+  +++ L K       L +   +   G V +LVTY  L+ 
Sbjct: 293 AYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD 352

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            L K G+    +  L+       + N +TYT ++    +        ++L  M+ K  + 
Sbjct: 353 WLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISP 412

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   + +VI  FVK G L +AT+Y   M   G+  ++V+Y TLI+ + K    +AA  + 
Sbjct: 413 NVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M  +G E +K+    L++GL + G I+ A    +  +  G   +   Y  ++D L K 
Sbjct: 473 HDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKA 532

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +  A    + +     + D+  Y+  ++ LC   +   A  +L      G++  +S  
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTY 592

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKI 454
             ++      G   +A K+  +++M+ I
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSI 620



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 163/361 (45%), Gaps = 35/361 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C   + ++A++I+ +   +G+ PD  TYN +I ++C+         +L+ M+ 
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 71  AGISPDVVTYNSLIAG---------------------------ATRNSLLSCS------- 96
           + I P+++TYN+L+AG                             R  L +CS       
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 97  -LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
            LD+ + M+  G+  D+  YN+L+  L   G   +A  V ++M+   + P T TFN ++ 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           G CK+ + DNA   +  +      P + T+N L+ GL   GR+  A  +L E+  SG  P
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TY  ++    +       + +   M  KG+      Y  +I+ F K G + +A +  
Sbjct: 798 NNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELF 857

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M   GV     +Y+ L++ + +          L +M+++GF   K T + +     K 
Sbjct: 858 KDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKP 917

Query: 336 G 336
           G
Sbjct: 918 G 918



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 166/387 (42%), Gaps = 1/387 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           L+  V   C+  R  +A A+  +  ++G +P+ VTY  LID+  +        ++L  M 
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+  D+VTY +L+    +        D L   L   +  +  +Y  L+  L +    D
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA +V  +M    ++P   TF+ ++NG  K    D A    R +++ G  P +VTY  LI
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G  K      A  +  ++   G   N     +++    +N K +  + +       G +
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G +  A  + ++++   +  D V YN  IN  C  GK + A  +
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L EM   G + D+ T+  +I   C+ G    A   L  M       NL  YN +V  L  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVH 396
            G ++ A  +   M V   F+ SS+ H
Sbjct: 637 TGAVEKAKYLLNEM-VSAGFSPSSLTH 662



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 117/242 (48%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D+  YN L+   C          +L  M  +GI+PD +T+N+LI G  ++S L  +
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNA 748

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
                +ML   I P++ ++N+L+  L  +G+  EA  V  +M    L P   T++I++ G
Sbjct: 749 FATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTG 808

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K      A+R++  +   GFVP++ TYN LI    KAG +  A+ + K++   G  P 
Sbjct: 809 HGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPT 868

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           + TY  ++    R R      + L  MK KG++        +  AF K G   +A   ++
Sbjct: 869 SCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLK 928

Query: 277 QM 278
            +
Sbjct: 929 NL 930



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 97/202 (48%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   CK++ L+ A A     +   + P++ T+N L+             T+L 
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M ++G+ P+ +TY+ L+ G  + S    ++ L  EM+  G  P V +YN+L+    + G
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A  +F+DM    + P + T++I+++G  + R      +  + +++ GF P   T +
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 187 ILIKGLCKAGRLRTARWILKEL 208
            + +   K G    A+ +LK L
Sbjct: 909 FICRAFSKPGMTWQAQRLLKNL 930


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 195/399 (48%), Gaps = 5/399 (1%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C   ++  A  ++ + +  G  PDVVTYN+L++A C+   +     +++ MR  G +P 
Sbjct: 162 LCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPT 221

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            VTYN ++ G  R   +  + +LL+ +   G  P+  +YN+++  L   G+ ++   +  
Sbjct: 222 NVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIA 281

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M   +  P  AT +++++ LC+      A+R+   + KH     +VTYN ++ GLC+ G
Sbjct: 282 EMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQG 341

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A ++L  +   G  PN  TY  ++K      +++   ++++ M +     D   + 
Sbjct: 342 HVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFN 401

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T+I    + G   +A +  +QM   G   + V+Y+++I    K GK+E +  LL+EM  +
Sbjct: 402 TIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSK 461

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           GF  +   H +L + L +   +  A   +  +   G       YN I+  L ++GK D A
Sbjct: 462 GFNPEINYH-LLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQA 520

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
           I++  +M     + D  TYS ++  L     +  A +LL
Sbjct: 521 IDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELL 559



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 200/480 (41%), Gaps = 46/480 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L N  V   C+  R   A  ++      G     VTY+ L D YC+    D    +++ M
Sbjct: 90  LANRLVRDLCRRGRPADAARVVE---ACGSAATAVTYSALADGYCRVGRLDEARRVVDGM 146

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
               + P    YN L+        +  +L LLD ML  G  PDV +YN L+    +    
Sbjct: 147 ---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGY 203

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            +A  +   M     TP   T+N++++G+C+    D A  +   L  +G  P  V YN +
Sbjct: 204 RQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTV 263

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAP--------------------------------- 215
           +KGL  AGR      ++ E+      P                                 
Sbjct: 264 LKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDC 323

Query: 216 --NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
             N +TY  ++            L +LS M+  G   + F Y  ++       R ++A D
Sbjct: 324 TANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAED 383

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            M +M       DI+++NT+I   C++G    A  +  +M ++G   +  T++ +I+GL 
Sbjct: 384 LMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLA 443

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
           K G ++ +   L  M   GF+  +  Y+ + + L ++ K+  AI +   ++       + 
Sbjct: 444 KTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAV 502

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            Y++++  LC+  +   A  +L + +  G    +S    ++ GL H G  +EA+++ S +
Sbjct: 503 LYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 150/307 (48%), Gaps = 10/307 (3%)

Query: 109 PPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALR 168
           PPDV   N L+  L + G+P +A RV +   CG       T++ + +G C+    D A R
Sbjct: 85  PPDVALANRLVRDLCRRGRPADAARVVE--ACGS-AATAVTYSALADGYCRVGRLDEARR 141

Query: 169 MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF 228
           +  G+     +P    YN L+  LC  G++R A  +L  +   G AP+ +TY  +++   
Sbjct: 142 VVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAAC 198

Query: 229 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
           + R Y+  +E++  M+ +G T     Y  ++    + G +  A + +  + + G   + V
Sbjct: 199 KGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTV 258

Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
           +YNT++      G+ E    L+ EM  +     + T +++I  LC+ G  + A   LE M
Sbjct: 259 NYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKM 318

Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRL 404
           +K    +N+  YN +V  L + G +D A+ +  +M+      + FTY+ +V  LC A+R 
Sbjct: 319 SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERW 378

Query: 405 PSASKLL 411
             A  L+
Sbjct: 379 EDAEDLM 385



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 136/281 (48%), Gaps = 1/281 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S   L++ + + C+    ++A  ++    +     ++VTYN ++   C+    D    +L
Sbjct: 291 SEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLL 350

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           + M+  G  P++ TYN L+ G         + DL+ +M +    PD+ ++N+++  L Q 
Sbjct: 351 SNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQK 410

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G   +A  VF+ M      P + T++ ++ GL K    + +L +   +   GF PE + Y
Sbjct: 411 GLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INY 469

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           ++L + L +  +L  A  ++ +L D+G +P A+ Y TI+    RN K    ++ILS M  
Sbjct: 470 HLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVS 529

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            G   D   Y  +I      G +KEA + +  + +  V +D
Sbjct: 530 DGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVD 570


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 202/393 (51%), Gaps = 5/393 (1%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           L   E    D +  G  PDVVT++ +I+  C+      G  +L  M E  + P+ VTY +
Sbjct: 242 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 301

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           L+    + ++   +L L  +M+  GIP D+  Y  LM  LF+ G   EA + F+ ++  +
Sbjct: 302 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 361

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
             P   T+  +++GLCK     +A  +   + +   +P +VTY+ +I G  K G L  A 
Sbjct: 362 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 421

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +L+++ D    PN  TY T++   F+  K ++ +E+   M+  G   + +    ++   
Sbjct: 422 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 481

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            +IGR+KE    ++ MV+ GV LD ++Y +LI+++ K G  EAA    +EM+++G   D 
Sbjct: 482 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 541

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
            ++ +LI G+ K G + GA    + M + G + ++  +N +++   K G  +  + +++ 
Sbjct: 542 VSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 600

Query: 383 ME---VKDSFTYSSMVHN-LCKAKRLPSASKLL 411
           M+   +K S    ++V   LC+  ++  A  +L
Sbjct: 601 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 633



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 14/390 (3%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN+ + +FCK  RL  A +++ + +   +  D VTYN +I   C+    D  Y  L+ M 
Sbjct: 134 LNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMV 190

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           + GI PD V+YN+LI G  +      +  L+DE+ E+    ++ ++  L+   + L   +
Sbjct: 191 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIE 246

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA   ++DM+     P   TF+ ++N LCK         + R +++    P  VTY  L+
Sbjct: 247 EA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 303

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
             L KA   R A  +  ++   G   + + YT +M   F+    +   +    +      
Sbjct: 304 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV 363

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            +   Y  ++    K G L  A   + QM+   V  ++V+Y+++IN Y K+G LE A  L
Sbjct: 364 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 423

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           L +ME Q    + +T+  +IDGL KAG  + A    + M  IG + N    + +V+ L +
Sbjct: 424 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 483

Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMV 395
            G+I     + + M  K    D   Y+S++
Sbjct: 484 IGRIKEVKGLVKDMVSKGVTLDQINYTSLI 513



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 200/429 (46%), Gaps = 36/429 (8%)

Query: 36  LGVLPDVVTYNMLIDAY-CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
            GV+PD   +N LI  +    +  D    I ++M   G+SPDV   N LI    +   LS
Sbjct: 89  FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 148

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            ++ LL   +   I  D  +YN+++  L + G  DEA +   +M+   + P T ++N ++
Sbjct: 149 FAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 205

Query: 155 NGLCK-----------------NRYTDNAL-----------RMFRGLQKHGFVPELVTYN 186
           +G CK                 N  T   L             +R +   GF P++VT++
Sbjct: 206 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 265

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I  LCK G++     +L+E+ +    PN +TYTT++   F+   Y+  L + S M  +
Sbjct: 266 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 325

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  ++    K G L+EA    + ++ D    ++V+Y  L++  CK G L +A
Sbjct: 326 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 385

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             ++ +M ++    +  T++ +I+G  K G ++ A   L  M       N   Y  ++D 
Sbjct: 386 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 445

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L K GK + AI + + M +    ++++   ++V++L +  R+     L+   +  GV + 
Sbjct: 446 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 505

Query: 423 KSAQKAVVD 431
           +    +++D
Sbjct: 506 QINYTSLID 514



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 36/412 (8%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL-DEMLEMGIPPDVWSYNSLMHCLF 123
           L+ M   G+ PD   +NSLI     N L+   + L+  +M+  G+ PDV++ N L+H   
Sbjct: 83  LSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC 142

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G+   A  + ++ +   ++  T T+N +++GLC++   D A +    + K G +P+ V
Sbjct: 143 KVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 199

Query: 184 TYNILIKGLCKAGRLRTARWILKELGD----------------------------SGHAP 215
           +YN LI G CK G    A+ ++ E+ +                            SG  P
Sbjct: 200 SYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 259

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +T+++I+    +  K   G  +L  M+      +   Y T++ +  K    + A    
Sbjct: 260 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 319

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
            QMV  G+ +D+V Y  L++   K G L  A      + +     +  T+T L+DGLCKA
Sbjct: 320 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 379

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
           G++  A   +  M +     N+  Y+ +++   K G ++ A+++   ME    V + FTY
Sbjct: 380 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 439

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            +++  L KA +   A +L       GV        A+V+ L+  G  +E K
Sbjct: 440 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 491



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 1/333 (0%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  DVV+YN+LI    +F    A +     MRE GI PD+ T+N ++    +       
Sbjct: 536 GMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 594

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L L D+M   GI P + S N ++  L + GK +EA  +   M+  ++ P   T+ I L+ 
Sbjct: 595 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K++  D   +    L  +G       YN LI  LCK G  + A  ++ ++   G  P+
Sbjct: 655 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 714

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +T+ ++M   F     +  L   S M   G + +   Y T+I      G +KE   ++ 
Sbjct: 715 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 774

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M + G++ D  +YN LI+   K G ++ +  +  EM   G      T+ +LI      G
Sbjct: 775 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 834

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            +  AR  L+ M K G   N   Y  ++  L K
Sbjct: 835 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 202/468 (43%), Gaps = 40/468 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  L  AE II   +   V+P+VVTY+ +I+ Y +    +   ++L +M +  + P+
Sbjct: 376 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 435

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TY ++I G  +      +++L  EM  +G+  + +  ++L++ L ++G+  E   + +
Sbjct: 436 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 495

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           DM+   +T     +  +++   K    + AL     +Q+ G   ++V+YN+LI G+ K G
Sbjct: 496 DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG 555

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           ++  A W  K + + G  P+  T+  +M    +    +  L++   MK  G         
Sbjct: 556 KV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN 614

Query: 257 TVIAAFVKIGRLKEATDYMEQM-----------------------------------VTD 281
            V+    + G+++EA   + QM                                   ++ 
Sbjct: 615 IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSY 674

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++L    YNTLI   CK G  + A +++ +ME +GF  D  T   L+ G     +++ A
Sbjct: 675 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 734

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
                 M + G   N+  YN I+  L   G I         M+ +    D FTY++++  
Sbjct: 735 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 794

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             K   +  +  +    +  G+    S    ++    + G   +A+++
Sbjct: 795 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAREL 842



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 114/255 (44%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V   C+  ++E+A  I+   + + + P++ TY + +D   +    DA +     +  
Sbjct: 614 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 673

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI      YN+LIA   +  +   +  ++ +M   G  PD  ++NSLMH  F      +
Sbjct: 674 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 733

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   +  M+   ++P  AT+N ++ GL          +    ++  G  P+  TYN LI 
Sbjct: 734 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 793

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G ++ +  I  E+   G  P   TY  ++       K     E+L  M ++G + 
Sbjct: 794 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 853

Query: 251 DGFGYCTVIAAFVKI 265
           +   YCT+I+   K+
Sbjct: 854 NTSTYCTMISGLCKL 868



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 35/238 (14%)

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           I S M   G + D F    +I +F K+GRL  A   +   V   + +D V+YNT+I+  C
Sbjct: 118 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLC 174

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI------- 351
           + G  + AY  L EM K G   D  ++  LIDG CK GN   A+  ++ ++++       
Sbjct: 175 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 234

Query: 352 ---------------------GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VK 386
                                GFD ++  ++ I++RL K GK+     +   ME      
Sbjct: 235 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 294

Query: 387 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           +  TY+++V +L KA     A  L    +  G+ +       ++DGL  +G  REA+K
Sbjct: 295 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 352


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 190/431 (44%), Gaps = 50/431 (11%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LST   N+ +    +  R + A  ++   +  GV PDV TY  LI   C+         +
Sbjct: 359 LSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNL 417

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            ++M+EAG+ P +VTY+SL+ G      +  +L L  EM + G PP+  +Y +LM    +
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477

Query: 125 LGKPDEANRVFQDM-----ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV 179
               D A  +  +M      CGD T     +NI++NGL           M +     GFV
Sbjct: 478 KKAFDNAYALLNEMRQNGVSCGDYT-----YNILINGLYMVNRVCEVDEMLKRFLSEGFV 532

Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           P  +TYN +I G  KAG + +A  + +++   G  PN +TYT+ +    R     L +++
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN-------- 291
           L  ++R G   D   Y   I  F K G +  A  ++  ++ DG+  D+  YN        
Sbjct: 593 LIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKN 652

Query: 292 ---------------------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
                                      TLI+ + K G +  A  L  EM       D  T
Sbjct: 653 LKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKT 712

Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM- 383
            T L  GLC++G+I GA+  L+ M ++    N+  YN +++   +DGK+  A  + + M 
Sbjct: 713 FTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEML 772

Query: 384 ---EVKDSFTY 391
               V D  TY
Sbjct: 773 SSGVVPDDTTY 783



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 193/402 (48%), Gaps = 7/402 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DVV   ML+  YC          + + +   G++P  VTY  LI G     +   +  L 
Sbjct: 290 DVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLC 349

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M+E G+    + +N ++  L +  +  +A  + + ++     P   T+  +++ LCK+
Sbjct: 350 RQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLE-LVVDTGVPDVFTYGCLIHWLCKH 408

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           +    A+ ++  +++ G  P +VTY+ L+ G C+ GR+  A  +  E+ D G  PN +TY
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY 468

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT+MK   + + +     +L+ M++ G +   + Y  +I     + R+ E  + +++ ++
Sbjct: 469 TTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLS 528

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +G     ++YN++IN + K G + +A+ +  +M K+G   +  T+T  IDG C+      
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMV 395
           A   L Y+ + G   ++ AYN  +D   K G +  A++ F  + +KD  T     Y+S V
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH-FLVLLLKDGLTPDVTVYNSFV 647

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                 K +  ASK   S +K  V         ++DG    G
Sbjct: 648 TGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVG 689



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 192/461 (41%), Gaps = 48/461 (10%)

Query: 32  DGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
           D +RL       GV PD   Y + I   C+    D    +L +MREAG  P  +TY+S++
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVV 262

Query: 85  AGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
               +   +  +L L D+ML   G   DV     LMH     G+  +A  +F +++   +
Sbjct: 263 DVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGV 322

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           TP   T+ +++ G      +D   ++ R + + G +     +N++IKGL +  R + A  
Sbjct: 323 TPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIG 382

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +L+ + D+G  P+  TY  ++    +++K    + +   MK  G       Y +++  + 
Sbjct: 383 LLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYC 441

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           + GR+ EA     +M   G   + V+Y TL+  Y K+   + AY LL+EM + G  C  Y
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+ ILI+GL     +      L+     GF      YN I++   K G +  A  ++  M
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561

Query: 384 EVK---------------------------------------DSFTYSSMVHNLCKAKRL 404
             K                                       D   Y++ +   CK   +
Sbjct: 562 RKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNM 621

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             A   L+  LK G+    +   + V G ++     EA K 
Sbjct: 622 SRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 190/470 (40%), Gaps = 76/470 (16%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV+PD  +   L+    +  S     T+ + MR  G   D   Y+ +I    R  +   +
Sbjct: 145 GVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDA 204

Query: 97  LDLLDEMLEMGIPPD---------------------------------VW--SYNSLMHC 121
           + L DEM   G+ PD                                  W  +Y+S++  
Sbjct: 205 VRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDV 264

Query: 122 LFQLGKPDEANR------------------------------------VFQDMICGDLTP 145
           L ++G+ DEA R                                    +F +++   +TP
Sbjct: 265 LVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTP 324

Query: 146 CTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWIL 205
              T+ +++ G      +D   ++ R + + G +     +N++IKGL +  R + A  +L
Sbjct: 325 TNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL 384

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           + + D+G  P+  TY  ++    +++K    + +   MK  G       Y +++  + + 
Sbjct: 385 ELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GR+ EA     +M   G   + V+Y TL+  Y K+   + AY LL+EM + G  C  YT+
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
            ILI+GL     +      L+     GF      YN I++   K G +  A  ++  M  
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           K    +  TY+S +   C+      A KLL+   + G++   +A  A +D
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 37/348 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+  R+++A  +  +    G  P+ VTY  L+  Y +  +FD  Y +LN MR+ G+S  
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499

Query: 77  VVTYNSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             TYN LI G    + + C +D +L   L  G  P   +YNS+++   + G    A  ++
Sbjct: 500 DYTYNILINGLYMVNRV-CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMY 558

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M    +TP   T+   ++G C+    D A+++   +++ G  P++  YN  I   CK 
Sbjct: 559 RQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A   L  L   G  P+   Y + +      +      +   +M ++    D   Y
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLD----------------------------- 286
            T+I  F K+G +  A +   +M+ + V  D                             
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738

Query: 287 ------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
                 IV+YN LIN   ++GKL+ A+ L DEM   G   D  T+ IL
Sbjct: 739 LDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/460 (23%), Positives = 187/460 (40%), Gaps = 76/460 (16%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +RM   G+ PD  +   L+    R +  + +L L DEM   G   D   Y+ ++    + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G   +A R+F +M    + P    + I ++GLCK R  D AL++   +++ GF P  +TY
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 186 NILIKGLCKAGRLRTARW------------------------------------ILKELG 209
           + ++  L K GR+  A                                      +  E+ 
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 210 DSGHAPNAITYTTIMKCC-----------------------------------FRNRKYK 234
             G  P  +TY  ++K C                                    R++++K
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK 378

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             + +L  +   G   D F Y  +I    K  +L EA +  ++M   GV+  IV+Y++L+
Sbjct: 379 DAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             YC++G+++ A  L  EM  +GF  ++ T+T L+ G  K      A   L  M + G  
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 355 SNLEAYNCIVDRL---GKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAKRLPSASKL 410
                YN +++ L    +  ++D  +  F S   V  + TY+S+++   KA  + SA  +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                K G+        + +DG   + C   A K+   +R
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 130/283 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +      NR+ + + ++   +  G +P  +TYN +I+ + +     + + +  +MR+
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P++VTY S I G  R +    ++ LL  +   GI PD+ +YN+ +    + G    
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      ++   LTP    +N  + G    +    A + +  + K   V +   Y  LI 
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G +  A  +  E+  +   P+  T+T +     R+        +L  M+R   + 
Sbjct: 684 GFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSP 743

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +   Y  +I A V+ G+L+EA    ++M++ GV  D  +Y+ L
Sbjct: 744 NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 201/425 (47%), Gaps = 15/425 (3%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFD----------A 60
           N+ V   C+   +++   ++      G  PD+V+YN ++   C    +D           
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
            +  L++M E G +PD+  Y ++I G  ++     + D+L  M   G+ P+V  YN+++ 
Sbjct: 242 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L    + +EA  +  +M   D      TFNI+++  C+N   D  + +   + +HG +P
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
           +++TY  +I G CK G +  A  +LK +   G  PN I+YT ++K   R  ++    E++
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
           S M ++G   +   + T+I    K G  ++A + ++QM+ +G   D++SY+T+I+   K 
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 481

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           GK E A  LL+ M  +G   +   ++ +   L + G         + +      S+   Y
Sbjct: 482 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 541

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS-CL 415
           N ++  L K  + D AI+ F  M     + +  TY+ ++  L     +  A  LL   C 
Sbjct: 542 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 601

Query: 416 KSGVR 420
           +  VR
Sbjct: 602 RRAVR 606



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 183/396 (46%), Gaps = 14/396 (3%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P+  TY  ++ + C         T+L+ M   G +      + ++  A R      ++
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
             L  +   G   D  + N ++  + + G  DE   + + +      P   ++N +L GL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 158 CKNRYTDNA----LRMFR------GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
           C  +  D+     + M R       + +HG  P+L  Y  +I G+CK G    A  IL  
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +   G  PN + Y T++K      +++   ++L+ M ++    D   +  ++  F + G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
           +    + +EQM+  G   D+++Y T+IN +CKEG ++ A +LL  M   G + +  ++TI
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-- 385
           ++ GLC+A     A+  + +M + G   N   +N +++ + K G  + AI + + M V  
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 386 --KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              D  +YS+++  L KA +   A +LL   +  G+
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 195/456 (42%), Gaps = 55/456 (12%)

Query: 46  NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
           +++++A C+   F +    L  +   G + D    N +++       +   ++LL ++  
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS 206

Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-------------CGDLTPCTATFNI 152
            G  PD+ SYN+++  L    + D+   +  +M+             C   TP    +  
Sbjct: 207 FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGC---TPDLRMYAT 263

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG--- 209
           +++G+CK+ + + A  +   +  +G  P +V YN ++KGLC A R   A  +L E+    
Sbjct: 264 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 323

Query: 210 --------------------------------DSGHAPNAITYTTIMKCCFRNRKYKLGL 237
                                           + G  P+ ITYTT++    +       +
Sbjct: 324 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 383

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            +L  M   G   +   Y  V+    +  R  +A + +  M+  G   + V++NTLIN  
Sbjct: 384 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 443

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
           CK+G  E A  LL +M   G   D  +++ +IDGL KAG  + A   L  M   G   N 
Sbjct: 444 CKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 503

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
             Y+ +   L ++G+ D  I +F+S++      D+  Y++++ +LCK      A      
Sbjct: 504 IIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAY 563

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            + +G    +S    ++ GL   G  REA+ + S++
Sbjct: 564 MVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 200/445 (44%), Gaps = 22/445 (4%)

Query: 16  TFCKANRL-EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
           + C A R  + A A+   G   GV    V YN +I  YC+     A   +   +    + 
Sbjct: 53  SLCAAGRTADAARALDTAGDAAGV----VAYNAMIAGYCRAGQVAAARRLAAAVP---VP 105

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+  TY  ++       L++ +L +LDEM   G        + ++    + G    A R 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
            Q +     T  +   N++++ +C+    D  + + R L   G  P++V+YN ++KGLC 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 195 AGRLRTARWI----------LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           A R      +          L ++ + G  P+   Y TI+    ++  +++  +ILS M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +   Y TV+       R +EA D + +M  +   LD V++N L++ +C+ G ++
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
               LL++M + G   D  T+T +I+G CK G +  A + L+ M+  G   N  +Y  ++
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             L +  +   A  +   M     + +  T++++++ +CK      A +LL   L +G  
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
               +   V+DGL  +G   EA ++
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALEL 490



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 144/375 (38%), Gaps = 59/375 (15%)

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           ++L+  L   G+  +A R       GD     A +N M+ G C+      A R+   +  
Sbjct: 48  SALIRSLCAAGRTADAARALD--TAGDAAGVVA-YNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
               P   TY  +++ LC  G +  A  +L E+   G A        I++   R   ++ 
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
            +  L  +  KG T D      V++A  + G + E  + + ++ + G + DIVSYN ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 296 LYCKEGKLEAAYLL----------LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
             C   + +    L          L +M + G   D   +  +IDG+CK G+ + A   L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 346 EYMNKIGFDSNLEAYNCI-----------------------------------VDRLGKD 370
             M   G   N+  YN +                                   VD   ++
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D  I + E M     + D  TY+++++  CK   +  A  LL +    G +    + 
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401

Query: 427 KAVVDGLRHSGCRRE 441
             V+ GL    CR E
Sbjct: 402 TIVLKGL----CRAE 412


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 154/287 (53%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF  +++G CKN   D
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +     +P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 380

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            +  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 381 PNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 2/297 (0%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+LM+   +LG  D
Sbjct: 131 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 190

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G VP  VT+  LI
Sbjct: 191 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 250

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GR+  A  I K +      P+ ITY T++    +    K    ++  M  KG  
Sbjct: 251 DGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 310

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G L  A ++ ++M+ + + LD V+Y  LI+  C+EG+   A  +
Sbjct: 311 PDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKM 370

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVD 365
           L EM   G + +  T+T++I+  CK G++ KG++L L+ M + G   ++  YN +++
Sbjct: 371 LREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPSVVTYNVLMN 426



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 142/296 (47%), Gaps = 1/296 (0%)

Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
           +LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  +   
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+TT
Sbjct: 189 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 248

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++    +N +  L +EI   M  +    D   Y T+I    K G LK+A   +++M   G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG 308

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           ++ D ++Y TLI+  CKEG L+ A+     M ++    D   +T LI GLC+ G    A 
Sbjct: 309 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAE 368

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
             L  M  +G   N   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 369 KMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 423



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       ++ + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 109 VLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 168

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 169 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 228

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +   M  Q    D  T+  LI GL
Sbjct: 229 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 289 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDD 348

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G++
Sbjct: 349 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 380



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 91/174 (52%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   +LPD++TYN LI   C+       + +++ M   G+ PD 
Sbjct: 254 CKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 313

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 314 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLRE 373

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P   T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 374 MLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 72/146 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD +TY  LID  C+    D  +    RM +
Sbjct: 282 NTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQ 341

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ P+  +Y  +++   + G   +
Sbjct: 342 ENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWK 401

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 402 GSKLLKEMQRDGHVPSVVTYNVLMNG 427


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 192/377 (50%), Gaps = 5/377 (1%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GKL++ +++I      +  ++E A+ +    +  G    V  ++ LI AY +    D   
Sbjct: 185 GKLASAMISI----LGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAI 240

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
            +   M+ +G+ P++VTYN++I    +  +  + + ++ DEML  G+ PD  ++NSL+  
Sbjct: 241 KVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAV 300

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
             + G  + A  +F +M+   +     T+N +L+ +CK    D A ++   + +   +P 
Sbjct: 301 CGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPN 360

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +VTY+ +I G  KAGRL  A  +  E+  +    + ++Y T++    +  +++  L +  
Sbjct: 361 VVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCK 420

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M+  G   D   Y  ++  + K G+ +E     E+M  + +  ++++Y+TLI++Y K G
Sbjct: 421 EMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGG 480

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
             + A  +  E +K G + D   ++ LID LCK G ++ A   L+ M K G   N+  YN
Sbjct: 481 LYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYN 540

Query: 362 CIVDRLGKDGKIDHAIN 378
            I+D  G+ G  +  I+
Sbjct: 541 SIIDAFGRSGSAECVID 557



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 5/345 (1%)

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           ++ +  L  G    V+++++L+    + G  DEA +VF+ M    L P   T+N +++  
Sbjct: 206 NVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDAC 265

Query: 158 CKNRYTDN-ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            K     N A  +F  + ++G  P+ +T+N L+    + G    AR +  E+   G   +
Sbjct: 266 GKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQD 325

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY T++    +  +  L  +I+S M RK    +   Y TVI  + K GRL EA +   
Sbjct: 326 IFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFN 385

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M    + LD VSYNTL+++Y K G+ E A  +  EME  G + D  T+  L+ G  K G
Sbjct: 386 EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
             +  +   E M       NL  Y+ ++D   K G    A+ VF   +      D   YS
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
           +++  LCK   + SA   L    K G+R       +++D    SG
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 182/409 (44%), Gaps = 40/409 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   C   R+E+   +I      G +P  V YN+LID YC+      G  +L  M   
Sbjct: 86  VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           GI P VVTY ++I    R   L+    LL EM   G+ P+V  YN++++ L +     +A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           + +   M+     P   TFN M+ G C+      AL++ R   + G  P  ++Y  LI G
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
            C  G    A  +L E+   GH P+ IT               LG               
Sbjct: 266 FCVRGEAMVASDLLVEMMGRGHTPDMIT---------------LG--------------- 295

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
                 +I   V  G++ +A    E+M    V  D   YN LI+  CK+  L AA  LL+
Sbjct: 296 -----ALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLE 350

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
           EM +Q  + DK+ +T LIDG  ++  +  AR   E+M +     ++ AYN ++    K G
Sbjct: 351 EMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFG 409

Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
            +  A+    SM     + D FTY+++V    K   + ++ +LL   +K
Sbjct: 410 MMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMK 458



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 8/405 (1%)

Query: 1   MFGKLSTRLLNICVCTFC-------KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           + G++ T+ +   V T+        +   L K E+++ +    G+ P+V  YN +I+A C
Sbjct: 138 LLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALC 197

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +  S      +LN+M ++  +PDVVT+N++IAG  R   +  +L LL E +  G+ P+  
Sbjct: 198 KCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQL 257

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           SY  L+H     G+   A+ +  +M+    TP   T   +++GL  +   ++AL +   +
Sbjct: 258 SYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKM 317

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
            +   +P+   YN+LI GLCK   L  A+ +L+E+ +    P+   YTT++    R+ K 
Sbjct: 318 AERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKL 377

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
               +I   M+ K    D   Y  +I  + K G +KEA   M  M   G   D  +Y TL
Sbjct: 378 SDARKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTL 436

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           ++ Y K+G + A+  LL +M K+  + + +T+  LI G C  G+   A      M   G 
Sbjct: 437 VDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGL 496

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
             N+  Y  ++  L K  K+  A   FE M +       + VH L
Sbjct: 497 FPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYL 541



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 170/395 (43%), Gaps = 40/395 (10%)

Query: 47  MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           +++   C     + G  ++      G  P  V YN LI G  R   +   L LL EM   
Sbjct: 86  VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145

Query: 107 GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA 166
           GI P V +Y +++H L + G   +   +  +M    L+P    +N ++N LCK R    A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205

Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
             M   + K  F P++VT+N +I G C+ G +R A  +L+E    G  PN ++YT ++  
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265

Query: 227 -CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
            C R     +  ++L  M  +G+T D      +I   V  G++ +A    E+M    V  
Sbjct: 266 FCVRGEAM-VASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMP 324

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           D   YN LI+  CK+  L AA  LL+EM +Q  + DK+ +T LIDG  ++  +  AR   
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR--- 381

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFTYSSMVHNLCKAK 402
                                            +FE ME K   D   Y+ M+   CK  
Sbjct: 382 --------------------------------KIFEFMEEKACPDIVAYNVMIKGYCKFG 409

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +  A   + S  K+G    +     +VDG    G
Sbjct: 410 MMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 189/449 (42%), Gaps = 53/449 (11%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + ++ N  +   CK     +A  ++   ++    PDVVT+N +I  +C+         +L
Sbjct: 185 NVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLL 244

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
                 G+ P+ ++Y  LI G         + DLL EM+  G  PD+ +  +L+H L   
Sbjct: 245 REAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVS 304

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH--------- 176
           G+ ++A  V + M    + P    +N++++GLCK R    A  +   + +          
Sbjct: 305 GQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIY 364

Query: 177 -----GFV--------------------PELVTYNILIKGLCKAGRLRTARWILKELGDS 211
                GFV                    P++V YN++IKG CK G ++ A   +  +  +
Sbjct: 365 TTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKA 424

Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
           G  P+  TYTT++    +       L +L  M ++    + F Y ++I  +  IG    A
Sbjct: 425 GCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSA 484

Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D   +M ++G+  ++V Y  LI    K+ K+  A    + M       +  T   L++G
Sbjct: 485 EDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNG 544

Query: 332 L--CKAGNIKGARLHLEYMNKI-------------GFDSNLEAYNCIVDRLGKDGKIDHA 376
           L  C+ G +   R   +  ++              G D  + AYN I+  L +   +  A
Sbjct: 545 LVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKA 604

Query: 377 INVFESMEVK----DSFTYSSMVHNLCKA 401
           +++ + M  K    D  T+ S+++    A
Sbjct: 605 MDLKDKMSNKGCLPDPITFLSLLYGFSSA 633



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 4/317 (1%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L  EML      D +S   ++  L   G+ +E   + +        P    +N++++G C
Sbjct: 68  LYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           +       L +   ++  G +P +VTY  +I  L + G L     +L E+   G +PN  
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQ 187

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y T++    + R      ++L+ M +  +  D   + T+IA F + G ++EA   + + 
Sbjct: 188 IYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREA 247

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           +  G++ + +SY  LI+ +C  G+   A  LL EM  +G   D  T   LI GL  +G +
Sbjct: 248 IRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQV 307

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVK---DSFTYSSM 394
             A +  E M +     +   YN ++  L K   +  A N+ E M E K   D F Y+++
Sbjct: 308 NDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTL 367

Query: 395 VHNLCKAKRLPSASKLL 411
           +    ++ +L  A K+ 
Sbjct: 368 IDGFVRSDKLSDARKIF 384


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 191/402 (47%), Gaps = 9/402 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+L   +    +A RL +A A++         PD   Y  L+ A+ +   F     +  R
Sbjct: 124 RVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRR 179

Query: 68  MREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M ++G+ P +VTYN ++   ++ ++     ++L+  M E G+ PD ++YN+L+ C  +  
Sbjct: 180 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 239

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA +VF +M      P   TFN +L+   K R  D A+ + + +++ G  P +VTYN
Sbjct: 240 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 299

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI    K G L  A  + +E+   G  P+ +TYTT++    R  K    +     M R 
Sbjct: 300 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 359

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I      G+  E     ++  + G   DIV++NTL+ ++ + G     
Sbjct: 360 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 419

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +  EM+K G+  ++ T+  LI    + G    A    + M + G   ++  YN ++  
Sbjct: 420 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 479

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
           L + G+ + A  +F  ME +    D ++YSS++H    AKRL
Sbjct: 480 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRL 521



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 204/440 (46%), Gaps = 9/440 (2%)

Query: 18  CKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C+   L K  A + D ++  G  PD VT+N L+D Y +    D    ++  M   G  P 
Sbjct: 235 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 294

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI+   ++ LL  ++ L  EM   G+ PDV +Y +L+  L + GK D A   + 
Sbjct: 295 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 354

Query: 137 DMICGDLTPCTATFN--IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+     P   T+N  I ++G+ + ++ +  + +F   +  GFVP++VT+N L+    +
Sbjct: 355 EMVRNGCKPNLCTYNALIKMHGV-RGKFPE-MMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 412

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G       + KE+  +G+ P   TY +++    R   + L ++I   M   G   D   
Sbjct: 413 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 472

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  V++A  + GR ++A     +M     + D  SY++L++ Y    +L+    L D++ 
Sbjct: 473 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 532

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG--- 371
            +  E   +    L+    K  N+  A      + +     ++   N +V   GK+    
Sbjct: 533 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 592

Query: 372 KIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           K++  +++ +   +   + TY+S++H   +         +L     SGVR  + +   V+
Sbjct: 593 KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 652

Query: 431 DGLRHSGCRREAKKIQSKIR 450
                 G  +EA ++ S+++
Sbjct: 653 YAYGRKGQMKEASRLFSEMK 672



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 196/473 (41%), Gaps = 39/473 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  + KA R ++A  +I +  R+G  P VVTYN LI +Y +    +    +   M 
Sbjct: 263 FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 322

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PDVVTY +LI+G  R   +  ++   DEM+  G  P++ +YN+L+      GK  
Sbjct: 323 VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 382

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   VF +       P   T+N +L    +N        +F+ ++K G++PE  TY  LI
Sbjct: 383 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 442

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               + G    A  I K + ++G  P+  TY  ++    R  +++   ++ + M+ +   
Sbjct: 443 SSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCK 502

Query: 250 FDGFGYCTVIAAFV-----------------------------------KIGRLKEATDY 274
            D + Y +++ A+                                    K+  L EA   
Sbjct: 503 PDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKA 562

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             ++      LDI   N ++++Y K   +     +L  M++        T+  L+    +
Sbjct: 563 FLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSR 622

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
            G+ +     L  +   G   +  +YN ++   G+ G++  A  +F  M+      D  T
Sbjct: 623 LGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVT 682

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           Y+  V +         A +L+   +  G +  +    ++V+G   +G   +AK
Sbjct: 683 YNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 177/374 (47%), Gaps = 5/374 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ +  ++A A R    +  L     +L+    PD  +Y +L+    + G+  +A  VF+
Sbjct: 119 VLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFR 178

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYT-DNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M+   + P   T+N++L+   K        + +   +++HG  P+  TYN LI    + 
Sbjct: 179 RMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRR 238

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              + A  +  E+  SG  P+ +T+ +++    + R++   +E++  M+R G       Y
Sbjct: 239 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 298

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I+++VK G L++A    ++M   G++ D+V+Y TLI+   + GK++AA +  DEM +
Sbjct: 299 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 358

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +  T+  LI      G         +     GF  ++  +N ++   G++G    
Sbjct: 359 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE 418

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
              VF+ M+    + +  TY S++ +  +      A ++    +++G+    S   AV+ 
Sbjct: 419 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLS 478

Query: 432 GLRHSGCRREAKKI 445
            L   G   +A+K+
Sbjct: 479 ALARGGRWEQAEKL 492



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 148/317 (46%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           + G +P+  TY  LI +Y +   FD    I  RM EAGI PDV TYN++++   R     
Sbjct: 428 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 487

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L  EM E    PD +SY+SL+H      + D+   +  D+    + P       ++
Sbjct: 488 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 547

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
               K      A + F  L++     ++   N ++    K   +R    IL  + +S   
Sbjct: 548 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 607

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +A TY ++M    R    +    IL+ +K  G   D + Y TVI A+ + G++KEA+  
Sbjct: 608 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 667

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M   G++ D+V+YN  +  Y      E A  L+  M  QG + ++ T+  +++G C+
Sbjct: 668 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727

Query: 335 AGNIKGARLHLEYMNKI 351
            G +  A++ +  + ++
Sbjct: 728 NGKLTDAKIFVSNLPQL 744



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 97/200 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L+   V    K N L +AE   ++  +     D+   N ++  Y +         IL+ M
Sbjct: 542 LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM 601

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +E+ I+    TYNSL+   +R        ++L E+   G+ PD +SYN++++   + G+ 
Sbjct: 602 KESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 661

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA+R+F +M C  L P   T+NI +     N   + A+ + R +   G  P   TYN +
Sbjct: 662 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSI 721

Query: 189 IKGLCKAGRLRTARWILKEL 208
           ++G C+ G+L  A+  +  L
Sbjct: 722 VEGYCRNGKLTDAKIFVSNL 741



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N  +  + +    EK E I+ +    GV PD  +YN +I AY +         +
Sbjct: 608 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 667

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M+ +G+ PDVVTYN  +     NS+   +++L+  M+  G  P+  +YNS++    +
Sbjct: 668 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727

Query: 125 LGKPDEA 131
            GK  +A
Sbjct: 728 NGKLTDA 734


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 192/402 (47%), Gaps = 9/402 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+L   +    +A RL +A A++         PD   Y  L+ A+ +   F     +  R
Sbjct: 142 RVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRR 197

Query: 68  MREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M ++G+ P +VTYN ++   ++ ++     ++L+  M E G+ PD ++YN+L+ C  +  
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA +VF +M      P   TFN +L+   K R  D A+ + + +++ G  P +VTYN
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI    K G L  A  + +E+   G  P+ +TYTT++    R  K    +     M R 
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I      G+  E     +++ + G   DIV++NTL+ ++ + G     
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +  EM+K G+  ++ T+  LI    + G    A    + M + G   ++  YN ++  
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
           L + G+ + A  +F  ME +    D ++YSS++H    AKRL
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRL 539



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 205/440 (46%), Gaps = 9/440 (2%)

Query: 18  CKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C+   L K  A + D ++  G  PD VT+N L+D Y +    D    ++  M   G  P 
Sbjct: 253 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI+   ++ LL  ++ L  EM   GI PDV +Y +L+  L + GK D A   + 
Sbjct: 313 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYD 372

Query: 137 DMICGDLTPCTATFN--IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+     P   T+N  I ++G+ + ++ +  + +F  L+  GFVP++VT+N L+    +
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGV-RGKFPE-MMAVFDELRSAGFVPDIVTWNTLLAVFGQ 430

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G       + KE+  +G+ P   TY +++    R   + L ++I   M   G   D   
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  V++A  + GR ++A     +M     + D  SY++L++ Y    +L+    L D++ 
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG--- 371
            +  E   +    L+    K  N+  A      + +     ++   N +V   GK+    
Sbjct: 551 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 610

Query: 372 KIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           K++  +++ +   +   + TY+S++H   +         +L     SGVR  + +   V+
Sbjct: 611 KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 670

Query: 431 DGLRHSGCRREAKKIQSKIR 450
                 G  +EA ++ S+++
Sbjct: 671 YAYGRKGQMKEASRLFSEMK 690



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/473 (22%), Positives = 197/473 (41%), Gaps = 39/473 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  + KA R ++A  +I +  R+G  P VVTYN LI +Y +    +    +   M 
Sbjct: 281 FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 340

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             GI PDVVTY +LI+G  R   +  ++   DEM+  G  P++ +YN+L+      GK  
Sbjct: 341 VKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   VF ++      P   T+N +L    +N        +F+ ++K G++PE  TY  LI
Sbjct: 401 EMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               + G    A  I K + ++G  P+  TY  ++    R  +++   ++ + M+ +   
Sbjct: 461 SSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCK 520

Query: 250 FDGFGYCTVIAAFV-----------------------------------KIGRLKEATDY 274
            D + Y +++ A+                                    K+  L EA   
Sbjct: 521 PDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKA 580

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             ++      LDI   N ++++Y K   +     +L  M++        T+  L+    +
Sbjct: 581 FLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSR 640

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
            G+ +     L  +   G   +  +YN ++   G+ G++  A  +F  M+      D  T
Sbjct: 641 LGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVT 700

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           Y+  V +         A +L+   +  G +  +    ++V+G   +G   +AK
Sbjct: 701 YNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 178/374 (47%), Gaps = 5/374 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ +  ++A A R    +  L     +L+    PD  +Y +L+    + G+  +A  VF+
Sbjct: 137 VLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFR 196

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYT-DNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M+   + P   T+N++L+   K        + +   +++HG  P+  TYN LI    + 
Sbjct: 197 RMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRR 256

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              + A  +  E+  SG  P+ +T+ +++    + R++   +E++  M+R G       Y
Sbjct: 257 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 316

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I+++VK G L++A    ++M   G++ D+V+Y TLI+   + GK++AA +  DEM +
Sbjct: 317 NSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 376

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +  T+  LI      G         + +   GF  ++  +N ++   G++G    
Sbjct: 377 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSE 436

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
              VF+ M+    + +  TY S++ +  +      A ++    +++G+    S   AV+ 
Sbjct: 437 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLS 496

Query: 432 GLRHSGCRREAKKI 445
            L   G   +A+K+
Sbjct: 497 ALARGGRWEQAEKL 510



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 148/317 (46%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           + G +P+  TY  LI +Y +   FD    I  RM EAGI PDV TYN++++   R     
Sbjct: 446 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 505

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L  EM E    PD +SY+SL+H      + D+   +  D+    + P       ++
Sbjct: 506 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
               K      A + F  L++     ++   N ++    K   +R    IL  + +S   
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +A TY ++M    R    +    IL+ +K  G   D + Y TVI A+ + G++KEA+  
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M   G++ D+V+YN  +  Y      E A  L+  M  QG + ++ T+  +++G C+
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745

Query: 335 AGNIKGARLHLEYMNKI 351
            G +  A++ +  + ++
Sbjct: 746 NGKLTDAKIFVSNLPQL 762



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 97/200 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L+   V    K N L +AE   ++  +     D+   N ++  Y +         IL+ M
Sbjct: 560 LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM 619

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +E+ I+    TYNSL+   +R        ++L E+   G+ PD +SYN++++   + G+ 
Sbjct: 620 KESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 679

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA+R+F +M C  L P   T+NI +     N   + A+ + R +   G  P   TYN +
Sbjct: 680 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSI 739

Query: 189 IKGLCKAGRLRTARWILKEL 208
           ++G C+ G+L  A+  +  L
Sbjct: 740 VEGYCRNGKLTDAKIFVSNL 759



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N  +  + +    EK E I+ +    GV PD  +YN +I AY +         +
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M+ +G+ PDVVTYN  +     NS+   +++L+  M+  G  P+  +YNS++    +
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745

Query: 125 LGK 127
            GK
Sbjct: 746 NGK 748


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 202/445 (45%), Gaps = 10/445 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            F +A   ++A         LG   P V  YN L+DA  +     A   + + MR+AG+ 
Sbjct: 42  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 101

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+V TYN LI    +N  +  +  +LDEM   G  PD  S+ +++  + +LG+ +EA   
Sbjct: 102 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 161

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             + +     P  A++N +++ LC          +   + + G  P +VTY  ++   CK
Sbjct: 162 LAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 216

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           A  LR A  IL  +   G  PN +T+T ++K  F + K    L +   M  +G+      
Sbjct: 217 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 276

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I     IG LK A D+   M  + +  +  +Y+TL++ +   G L+ A L+ +EM+
Sbjct: 277 YNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 336

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G + +   +T +ID LCK      A   ++ M       N   +N ++ RL   G++ 
Sbjct: 337 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 396

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+NVF  M       +  TY+ ++H L +      A  +++  L +G  +       V+
Sbjct: 397 RALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVI 456

Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
           + L     R+ A  +  ++ +  I 
Sbjct: 457 NCLCQMCMRKHAMLLLGRMMVQGIQ 481



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 174/367 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C   R+ +  +++ + ++ G+ P+VVTY  ++DA+C+         IL RM  
Sbjct: 173 NAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVS 232

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+V+T+ +L+ G   +  +  +L +   M++ G  P   SYN L+  L  +G    
Sbjct: 233 MGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKG 292

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F  M    L P   T++ +++G       D A+ ++  ++  G  P +V Y  +I 
Sbjct: 293 ALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMID 352

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK      A  ++ ++      PN +T+ T++       +    L +   M+R G   
Sbjct: 353 VLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP 412

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  ++    + G  K+A   + +M+ +G +L +V+YNT+IN  C+    + A LLL
Sbjct: 413 NDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLL 472

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M  QG + D +T   +I   CK G +  A   L  MN +    N+ AY  ++  L   
Sbjct: 473 GRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQ 532

Query: 371 GKIDHAI 377
           GK+ +A+
Sbjct: 533 GKLSNAM 539



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 188/402 (46%), Gaps = 44/402 (10%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   CK  R+E+A   + + +     P   +YN ++ A C        ++++N M + G+
Sbjct: 146 VSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGL 200

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+VVTY +++    +   L  +  +L  M+ MG  P+V ++ +L+   F+ GK  +A  
Sbjct: 201 QPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALS 260

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           ++  M+     P T ++N+++ GLC       AL  F  ++++  +P   TY+ L+ G  
Sbjct: 261 MWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFS 320

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            AG L  A  I  E+  SG  PN + YT +             +++L     K   FD  
Sbjct: 321 NAGDLDGAMLIWNEMKSSGCKPNVVVYTNM-------------IDVLC----KKMMFD-- 361

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
                           +A   +++M+ D    + V++NTLI   C  G++  A  +   M
Sbjct: 362 ----------------QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 405

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
            + G   +  T+  L+ GL + GN K A   +  M   GF+ +L  YN +++ L +    
Sbjct: 406 RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMR 465

Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            HA+ +   M V+    D+FT+++++H  CK  ++  A+ LL
Sbjct: 466 KHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 507



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 158/349 (45%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCKA  L  A AI+   + +G  P+V+T+  L+  + +        ++ + M + G +P
Sbjct: 213 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 272

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             ++YN LI G      L  +LD  + M    + P+  +Y++L+      G  D A  ++
Sbjct: 273 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 332

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      P    +  M++ LCK    D A  +   +      P  VT+N LI  LC  
Sbjct: 333 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 392

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A  +   +  +G  PN  TY  ++   FR   +K    ++  M   G+      Y
Sbjct: 393 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 452

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            TVI    ++   K A   + +M+  G+Q D  ++N +I+ YCKEGK+  A  LL +M  
Sbjct: 453 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 512

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                +   +TILI  LC  G +  A ++L  M   G   N   +N +V
Sbjct: 513 VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N+ +   C    L+ A        R  +LP+  TY+ L+D +      D    I 
Sbjct: 273 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 332

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M+ +G  P+VV Y ++I    +  +   +  L+D+ML    PP+  ++N+L+  L   
Sbjct: 333 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 392

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A  VF  M      P   T+N +L+GL +     +A  M   +  +GF   LVTY
Sbjct: 393 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 452

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LC+    + A  +L  +   G  P+A T+  I+    +  K  +   +L  M  
Sbjct: 453 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 512

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
                +   Y  +I+     G+L  A  Y+ +M+ +G+  +  ++N L+
Sbjct: 513 VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 94/215 (43%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK    ++AE++I   +     P+ VT+N LI   C          + + MR  G  P
Sbjct: 353 VLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP 412

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TYN L+ G  R      +  ++ EML  G    + +YN++++CL Q+     A  + 
Sbjct: 413 NDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLL 472

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   + P   TFN +++  CK      A  +   +        +V Y ILI  LC  
Sbjct: 473 GRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQ 532

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           G+L  A   L ++   G  PN  T+  +++  F N
Sbjct: 533 GKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 71/148 (47%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           + A A++I+ +  G    +VTYN +I+  CQ         +L RM   GI PD  T+N++
Sbjct: 431 KDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 490

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           I    +   +S +  LL +M  +  P +V +Y  L+  L   GK   A      M+   +
Sbjct: 491 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 550

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFR 171
            P  AT+N+++  +  N  T   + +F+
Sbjct: 551 CPNEATWNVLVRAIFTNIGTIGPIHLFK 578


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 152/287 (52%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF  +++G CKN   D
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +     +P+L+TYN LI GLCK G L  A  ++ E+   G  P+  TYTT++
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 307 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 367 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 105 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 164

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 165 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 224

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++      P+ ITY T++    +        
Sbjct: 225 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAH 284

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D F Y T+I    K G L  A ++ ++M+ + ++LD V+Y  +I+  
Sbjct: 285 GLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGL 344

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 345 CQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHVPS 403

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 404 VXTYNVLMN 412



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 136/284 (47%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+
Sbjct: 173 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +    D   Y T+I    K G L +A   +++M  
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM 292

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D  +Y TLI+  CKEG L+AA+     M ++    D   +T +I GLC+ G    
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVD 352

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           A   L  M  +G   +   Y  I++   K G +     + + M+
Sbjct: 353 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 396



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 141/273 (51%), Gaps = 4/273 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           FNI+++  CK+     A  +F  + K G  P +V+YN L+ G  + G L     +   + 
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            SG  P+  TY+ ++    +  K     E+   M  KG   +G  + T+I    K GR+ 
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM++  +  D+++YNTLI   CK+G L  A+ L+DEM  +G + DK+T+T LI
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-IDHAINVFESMEV--- 385
           DG CK G++  A  H + M +     +  AY  I+  L ++G+ +D    + E + V   
Sbjct: 307 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            D+ TY+ +++  CK   +   SKLL    ++G
Sbjct: 367 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 399



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K RY       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 95  VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 154

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 155 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 214

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 215 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 274

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++  A   ++ M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 275 CKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 334

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G++
Sbjct: 335 VAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 93/174 (53%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   +LPD++TYN LI   C+    +  + +++ M   G+ PD 
Sbjct: 240 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDK 299

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            TY +LI G  +   L  + +    M++  I  D  +Y +++  L Q G+P +A ++ ++
Sbjct: 300 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLRE 359

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P T T+ +++N  CK        ++ + +Q++G VP + TYN+L+ G
Sbjct: 360 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L +A  +I +    G+ PD  TY  LID  C+    DA +    RM +
Sbjct: 268 NTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQ 327

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y ++I+G  +      +  +L EML +G+ PD  +Y  +++   + G   +
Sbjct: 328 ENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWK 387

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 388 GSKLLKEMQRNGHVPSVXTYNVLMNG 413


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 191/402 (47%), Gaps = 9/402 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+L   +    +A RL +A A++         PD   Y  L+ A+ +   F     +  R
Sbjct: 142 RVLATAIRVMARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRR 197

Query: 68  MREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M ++G+ P +VTYN ++   ++ ++     ++L+  M E G+ PD ++YN+L+ C  +  
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA +VF +M      P   TFN +L+   K R  D A+ + + +++ G  P +VTYN
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI    K G L  A  + +E+   G  P+ +TYTT++    R  K    +     M R 
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   +   Y  +I      G+  E     ++  + G   DIV++NTL+ ++ + G     
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +  EM+K G+  ++ T+  LI    + G    A    + M + G   ++  YN ++  
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
           L + G+ + A  +F  ME +    D ++YSS++H    AKRL
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRL 539



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 204/440 (46%), Gaps = 9/440 (2%)

Query: 18  CKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C+   L K  A + D ++  G  PD VT+N L+D Y +    D    ++  M   G  P 
Sbjct: 253 CRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPS 312

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI+   ++ LL  ++ L  EM   G+ PDV +Y +L+  L + GK D A   + 
Sbjct: 313 VVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYD 372

Query: 137 DMICGDLTPCTATFN--IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+     P   T+N  I ++G+ + ++ +  + +F   +  GFVP++VT+N L+    +
Sbjct: 373 EMVRNGCKPNLCTYNALIKMHGV-RGKFPE-MMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 430

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G       + KE+  +G+ P   TY +++    R   + L ++I   M   G   D   
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  V++A  + GR ++A     +M     + D  SY++L++ Y    +L+    L D++ 
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG--- 371
            +  E   +    L+    K  N+  A      + +     ++   N +V   GK+    
Sbjct: 551 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 610

Query: 372 KIDHAINVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           K++  +++ +   +   + TY+S++H   +         +L     SGVR  + +   V+
Sbjct: 611 KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 670

Query: 431 DGLRHSGCRREAKKIQSKIR 450
                 G  +EA ++ S+++
Sbjct: 671 YAYGRKGQMKEASRLFSEMK 690



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 196/473 (41%), Gaps = 39/473 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  + KA R ++A  +I +  R+G  P VVTYN LI +Y +    +    +   M 
Sbjct: 281 FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME 340

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PDVVTY +LI+G  R   +  ++   DEM+  G  P++ +YN+L+      GK  
Sbjct: 341 VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   VF +       P   T+N +L    +N        +F+ ++K G++PE  TY  LI
Sbjct: 401 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               + G    A  I K + ++G  P+  TY  ++    R  +++   ++ + M+ +   
Sbjct: 461 SSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCK 520

Query: 250 FDGFGYCTVIAAFV-----------------------------------KIGRLKEATDY 274
            D + Y +++ A+                                    K+  L EA   
Sbjct: 521 PDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKA 580

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             ++      LDI   N ++++Y K   +     +L  M++        T+  L+    +
Sbjct: 581 FLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSR 640

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFT 390
            G+ +     L  +   G   +  +YN ++   G+ G++  A  +F  M+      D  T
Sbjct: 641 LGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVT 700

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
           Y+  V +         A +L+   +  G +  +    ++V+G   +G   +AK
Sbjct: 701 YNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 177/374 (47%), Gaps = 5/374 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V+ +  ++A A R    +  L     +L+    PD  +Y +L+    + G+  +A  VF+
Sbjct: 137 VLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFR 196

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYT-DNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            M+   + P   T+N++L+   K        + +   +++HG  P+  TYN LI    + 
Sbjct: 197 RMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRR 256

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
              + A  +  E+  SG  P+ +T+ +++    + R++   +E++  M+R G       Y
Sbjct: 257 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 316

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            ++I+++VK G L++A    ++M   G++ D+V+Y TLI+   + GK++AA +  DEM +
Sbjct: 317 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 376

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G + +  T+  LI      G         +     GF  ++  +N ++   G++G    
Sbjct: 377 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE 436

Query: 376 AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
              VF+ M+    + +  TY S++ +  +      A ++    +++G+    S   AV+ 
Sbjct: 437 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLS 496

Query: 432 GLRHSGCRREAKKI 445
            L   G   +A+K+
Sbjct: 497 ALARGGRWEQAEKL 510



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 148/317 (46%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           + G +P+  TY  LI +Y +   FD    I  RM EAGI PDV TYN++++   R     
Sbjct: 446 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 505

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  L  EM E    PD +SY+SL+H      + D+   +  D+    + P       ++
Sbjct: 506 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
               K      A + F  L++     ++   N ++    K   +R    IL  + +S   
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
            +A TY ++M    R    +    IL+ +K  G   D + Y TVI A+ + G++KEA+  
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
             +M   G++ D+V+YN  +  Y      E A  L+  M  QG + ++ T+  +++G C+
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745

Query: 335 AGNIKGARLHLEYMNKI 351
            G +  A++ +  + ++
Sbjct: 746 NGKLTDAKIFVSNLPQL 762



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 97/200 (48%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L+   V    K N L +AE   ++  +     D+   N ++  Y +         IL+ M
Sbjct: 560 LVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM 619

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +E+ I+    TYNSL+   +R        ++L E+   G+ PD +SYN++++   + G+ 
Sbjct: 620 KESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 679

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA+R+F +M C  L P   T+NI +     N   + A+ + R +   G  P   TYN +
Sbjct: 680 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSI 739

Query: 189 IKGLCKAGRLRTARWILKEL 208
           ++G C+ G+L  A+  +  L
Sbjct: 740 VEGYCRNGKLTDAKIFVSNL 759



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           LS    N  +  + +    EK E I+ +    GV PD  +YN +I AY +         +
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            + M+ +G+ PDVVTYN  +     NS+   +++L+  M+  G  P+  +YNS++    +
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745

Query: 125 LGK 127
            GK
Sbjct: 746 NGK 748


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 202/445 (45%), Gaps = 10/445 (2%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            F +A   ++A         LG   P V  YN L+DA  +     A   + + MR+AG+ 
Sbjct: 95  AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 154

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           P+V TYN LI    +N  +  +  +LDEM   G  PD  S+ +++  + +LG+ +EA   
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 214

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
             + +     P  A++N +++ LC          +   + + G  P +VTY  ++   CK
Sbjct: 215 LAETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
           A  LR A  IL  +   G  PN +T+T ++K  F + K    L +   M  +G+      
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  +I     IG LK A D+   M  + +  +  +Y+TL++ +   G L+ A L+ +EM+
Sbjct: 330 YNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G + +   +T +ID LCK      A   ++ M       N   +N ++ RL   G++ 
Sbjct: 390 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 449

Query: 375 HAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
            A+NVF  M       +  TY+ ++H L +      A  +++  L +G  +       V+
Sbjct: 450 RALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVI 509

Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
           + L     R+ A  +  ++ +  I 
Sbjct: 510 NCLCQMCMRKHAMLLLGRMMVQGIQ 534



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 174/367 (47%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V   C   R+ +  +++ + ++ G+ P+VVTY  ++DA+C+         IL RM  
Sbjct: 226 NAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVS 285

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G +P+V+T+ +L+ G   +  +  +L +   M++ G  P   SYN L+  L  +G    
Sbjct: 286 MGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKG 345

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F  M    L P   T++ +++G       D A+ ++  ++  G  P +V Y  +I 
Sbjct: 346 ALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMID 405

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            LCK      A  ++ ++      PN +T+ T++       +    L +   M+R G   
Sbjct: 406 VLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP 465

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +   Y  ++    + G  K+A   + +M+ +G +L +V+YNT+IN  C+    + A LLL
Sbjct: 466 NDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLL 525

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M  QG + D +T   +I   CK G +  A   L  MN +    N+ AY  ++  L   
Sbjct: 526 GRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQ 585

Query: 371 GKIDHAI 377
           GK+ +A+
Sbjct: 586 GKLSNAM 592



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 195/417 (46%), Gaps = 35/417 (8%)

Query: 30  IIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG-- 86
           + D +R  GV P+V TYN+LI A CQ    DA   +L+ M   G  PD V++ ++++G  
Sbjct: 144 VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMC 203

Query: 87  -------------------ATRNSLLSC---------SLDLLDEMLEMGIPPDVWSYNSL 118
                              A+ N+++              +++EM++ G+ P+V +Y ++
Sbjct: 204 KLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTI 263

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           +    +  +   A  +   M+    TP   TF  ++ G  ++    +AL M+  +   G+
Sbjct: 264 VDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGW 323

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P  ++YN+LI+GLC  G L+ A      +  +   PNA TY+T++            + 
Sbjct: 324 APSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAML 383

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           I + MK  G   +   Y  +I    K     +A   +++M+ D    + V++NTLI   C
Sbjct: 384 IWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLC 443

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
             G++  A  +   M + G   +  T+  L+ GL + GN K A   +  M   GF+ +L 
Sbjct: 444 DCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLV 503

Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
            YN +++ L +     HA+ +   M V+    D+FT+++++H  CK  ++  A+ LL
Sbjct: 504 TYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLL 560



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 158/349 (45%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            FCKA  L  A AI+   + +G  P+V+T+  L+  + +        ++ + M + G +P
Sbjct: 266 AFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAP 325

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             ++YN LI G      L  +LD  + M    + P+  +Y++L+      G  D A  ++
Sbjct: 326 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 385

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M      P    +  M++ LCK    D A  +   +      P  VT+N LI  LC  
Sbjct: 386 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           GR+  A  +   +  +G  PN  TY  ++   FR   +K    ++  M   G+      Y
Sbjct: 446 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            TVI    ++   K A   + +M+  G+Q D  ++N +I+ YCKEGK+  A  LL +M  
Sbjct: 506 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 565

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
                +   +TILI  LC  G +  A ++L  M   G   N   +N +V
Sbjct: 566 VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N+ +   C    L+ A        R  +LP+  TY+ L+D +      D    I 
Sbjct: 326 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 385

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N M+ +G  P+VV Y ++I    +  +   +  L+D+ML    PP+  ++N+L+  L   
Sbjct: 386 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A  VF  M      P   T+N +L+GL +     +A  M   +  +GF   LVTY
Sbjct: 446 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I  LC+    + A  +L  +   G  P+A T+  I+    +  K  +   +L  M  
Sbjct: 506 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 565

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
                +   Y  +I+     G+L  A  Y+ +M+ +G+  +  ++N L+
Sbjct: 566 VNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 94/215 (43%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK    ++AE++I   +     P+ VT+N LI   C          + + MR  G  P
Sbjct: 406 VLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHP 465

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           +  TYN L+ G  R      +  ++ EML  G    + +YN++++CL Q+     A  + 
Sbjct: 466 NDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLL 525

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   + P   TFN +++  CK      A  +   +        +V Y ILI  LC  
Sbjct: 526 GRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQ 585

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           G+L  A   L ++   G  PN  T+  +++  F N
Sbjct: 586 GKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 71/148 (47%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           + A A++I+ +  G    +VTYN +I+  CQ         +L RM   GI PD  T+N++
Sbjct: 484 KDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           I    +   +S +  LL +M  +  P +V +Y  L+  L   GK   A      M+   +
Sbjct: 544 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 603

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFR 171
            P  AT+N+++  +  N  T   + +F+
Sbjct: 604 CPNEATWNVLVRAIFTNIGTIGPIHLFK 631


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 149/273 (54%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+++  +C+        ++ + + + G+ P VV++N+L+ G  R   L     L   M 
Sbjct: 139 FNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K DEAN +F +M+   L P   TF  +++  CKN   D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVD 258

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           +A+ +++ +   GF P+L+TYN LI GLCK G L+  R ++ E+  +G  P+ ITYTT++
Sbjct: 259 SAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLI 318

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +    +   E    M ++    D   Y  +++   + GR  +A     +M++ G++
Sbjct: 319 DGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLK 378

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
            D  +Y  +IN +CK+G +  A  LL EM++ G
Sbjct: 379 PDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 140/287 (48%)

Query: 98  DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
           D   E+LE G P  ++ +N +MH   + G+   A  VF  +    L P   +FN ++NG 
Sbjct: 122 DFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGY 181

Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
            +    D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+ D G  PN 
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNG 241

Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
           +T+TT++    +N      +EI   M  +G++ D   Y T+I    K G LK+    +++
Sbjct: 242 VTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDE 301

Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
           M  +G++ D ++Y TLI+  CKEG LE A+     M K+    D   +T L+ GLC+ G 
Sbjct: 302 MSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGR 361

Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              A      M  +G   +   Y  I++   K G +  A  + + M+
Sbjct: 362 ADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 147/295 (49%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N ++    +   +  +  + D + + G+ P V S+N+
Sbjct: 117 FKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNT 176

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M    + P   T+++++NGLCK    D A  +F  +   G
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI   CK G + +A  I K++   G +P+ ITY T++    +    K   
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVR 296

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M   G   D   Y T+I    K G L+ A ++ ++M+ + ++LD V+Y  L++  
Sbjct: 297 ALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGL 356

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           C+EG+ + A  +  EM   G + D  T+T++I+  CK G+++ A   L+ M + G
Sbjct: 357 CQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 6/345 (1%)

Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF 170
           D++ ++ LM    + G   +A + F+            T   +L  L K +Y       +
Sbjct: 65  DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFY 124

Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
           + + + G+   L  +NI++   CK G +R A+ +   +   G  P+ +++ T+M    R 
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRL 184

Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
                G  + SAM   G   D + Y  +I    K  ++ EA +   +M+  G+  + V++
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTF 244

Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
            TLI+++CK G +++A  +  +M  QGF  D  T+  LI GLCK G++K  R  ++ M+ 
Sbjct: 245 TTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSM 304

Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAIN-----VFESMEVKDSFTYSSMVHNLCKAKRLP 405
            G   +   Y  ++D   K+G ++ A       + ES+ + D+  Y+++V  LC+  R  
Sbjct: 305 NGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRL-DNVAYTALVSGLCQEGRAD 363

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            A K+    L  G++        +++     G  R A ++  +++
Sbjct: 364 DAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK +++++A  +  + +  G++P+ VT+  LID +C+    D+   I  +M  
Sbjct: 210 SVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLS 269

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPD++TYN+LI G  +   L     L+DEM   G+ PD  +Y +L+    + G  + 
Sbjct: 270 QGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLET 329

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + MI   +      +  +++GLC+    D+A +MFR +   G  P+  TY ++I 
Sbjct: 330 AFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIIN 389

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAIT 219
             CK G +RTA  +LKE+   GH P  +T
Sbjct: 390 EFCKKGDVRTASRLLKEMQRDGHVPCVVT 418



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 35/278 (12%)

Query: 6   STRLLNICVCTFCKANRLEKAEAI----------------------------IIDGIRL- 36
           S    NI +  FCK   + +A+++                            + +G RL 
Sbjct: 135 SLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 194

Query: 37  ------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRN 90
                 GV PDV TY++LI+  C+    D    + N M + G+ P+ VT+ +LI    +N
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKN 254

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
            ++  ++++  +ML  G  PD+ +YN+L++ L + G   +   +  +M    L P   T+
Sbjct: 255 GMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITY 314

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
             +++G CK    + A    + + K     + V Y  L+ GLC+ GR   A  + +E+  
Sbjct: 315 TTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLS 374

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
            G  P+  TYT I+    +    +    +L  M+R G+
Sbjct: 375 VGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGH 412


>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 490

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 12/386 (3%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   NI +    +A R +   A     ++ G+ PDV+TY+ L+  +C     +    +L 
Sbjct: 99  TYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDLLL 158

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI--PPDVWSYNSLMHCLFQ 124
             R +G  PD ++Y+ ++     +    C+LDLL  M E G    P V SYN ++H  F+
Sbjct: 159 H-RVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGFFK 217

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+  +A  +F  MI     P   T+N ++N LCK R  D A  + R +  +   P+ VT
Sbjct: 218 EGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDAVT 277

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YN LI G    G+L+    +LK +   G  P+ +T +++M    ++ K K   E+  +  
Sbjct: 278 YNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRA 337

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y  ++  +   G L +  D  E M  DGV  D+  +N LIN Y K G ++
Sbjct: 338 VNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYGMMD 397

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A L  ++M KQG + +++T+  +I   CK G +  A      M  +G   + E Y C+V
Sbjct: 398 VAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVYMCMV 457

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFT 390
                +G ++H     +SM+ ++  T
Sbjct: 458 -----EGYLNHG----DSMKAEEFIT 474



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 185/390 (47%), Gaps = 7/390 (1%)

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
           I+PD  TYN LI    R             +L+ GI PDV +Y+SL+ C   + + +EA 
Sbjct: 95  IAPDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEAL 154

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG--FVPELVTYNILIK 190
            +    + GDL P   +++++L   C +  +  AL + R + + G    P +V+YN++I 
Sbjct: 155 DLLLHRVSGDL-PDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIH 213

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G +  A  +   +   G+ P+ +TY +++    + R       +L +M       
Sbjct: 214 GFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQP 273

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y ++I  ++ +G+LKE    ++ M + GV   +V+ +++++  CK GK++ A  + 
Sbjct: 274 DAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMF 333

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
                 G + D   ++I++ G    G++       E M + G   +L  +N +++   K 
Sbjct: 334 YSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKY 393

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           G +D A+  FE M  +    + FTY +++   CK  R+  A +     +  GV +     
Sbjct: 394 GMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVY 453

Query: 427 KAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
             +V+G  + G   +A++  +K++   I H
Sbjct: 454 MCMVEGYLNHGDSMKAEEFITKMKNMDIHH 483


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 171/341 (50%), Gaps = 4/341 (1%)

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            NRM      P    +N++++   +N      + L  +    GI PD+ + + L++C   
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           L     A  VF +++     P   T N ++ GLC       AL     +   GF  + V+
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCKAG  +    +L++L      P+ + YTTI+ C  +N+      ++ S M 
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            KG + + F Y T+I  F  +G LKEA   + +M    +  D+ ++N LI+   KEGK++
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  L +EM+ +    +  T+T LIDGLCK  +++ A    + M + G   N+ +Y  ++
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILL 348

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
           D L K G++++A   F+ + VK    +  TY+ M++ LCKA
Sbjct: 349 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 389



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 188/420 (44%), Gaps = 43/420 (10%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
            T L N  + +  K  R     ++       G+ PD+ T ++LI+ +C        +++ 
Sbjct: 60  PTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVF 119

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             + + G  P+ +T N+LI G      +  +L   D+++  G   D  SY +L       
Sbjct: 120 ANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTL------- 172

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
                                       +NGLCK   T    R+ R L+ H   P+LV Y
Sbjct: 173 ----------------------------INGLCKAGETKAVARLLRKLEGHSVKPDLVMY 204

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAM 243
             +I  LCK   L  A  +  E+   G +PN  TYTT++   C   N K    L  L+ M
Sbjct: 205 TTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSL--LNEM 262

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K K    D + +  +I A  K G++ EA    E+M    +  +IV+Y +LI+  CK   L
Sbjct: 263 KLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHL 322

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           E A  L  +M++QG + + Y++TIL+D LCK G ++ A+   +++   G+  N+  YN +
Sbjct: 323 ERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVM 382

Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
           ++ L K G     +++   ME K    ++ T+ +++  L +      A K L   +  G+
Sbjct: 383 INGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 153/320 (47%), Gaps = 6/320 (1%)

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A   F  M+     P T  FN +L+ L KN+     + +F+  + +G  P+L T +ILI
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY 248
              C    +  A  +   +   G+ PNAIT  T++K  CF   + K  L     +  +G+
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCG-EIKRALHFHDKVVAQGF 162

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T+I    K G  K     + ++    V+ D+V Y T+I+  CK   L  A  
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM  +G   + +T+T LI G C  GN+K A   L  M     + ++  +N ++D L 
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALA 282

Query: 369 KDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K+GKID A+++FE M+ K+ F    TY+S++  LCK   L  A  L     + G++    
Sbjct: 283 KEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVY 342

Query: 425 AQKAVVDGLRHSGCRREAKK 444
           +   ++D L   G    AK+
Sbjct: 343 SYTILLDALCKGGRLENAKQ 362



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 40/313 (12%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+T +  +C C   K   L   + ++  G +L    D V+Y  LI+  C+     A   +
Sbjct: 134 LNTLIKGLCFCGEIK-RALHFHDKVVAQGFQL----DQVSYGTLINGLCKAGETKAVARL 188

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L ++    + PD+V Y ++I    +N LL  + DL  EM+  GI P+V++Y +L+H    
Sbjct: 189 LRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCI 248

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G   EA  +  +M   ++ P   TFNI+++ L K    D A+ +F  ++     P +VT
Sbjct: 249 MGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVT 308

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  LI GLCK   L  A  + K++ + G  PN  +YT ++                    
Sbjct: 309 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLD------------------- 349

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
                           A  K GRL+ A  + + ++  G  L++ +YN +IN  CK G   
Sbjct: 350 ----------------ALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFG 393

Query: 305 AAYLLLDEMEKQG 317
               L  +ME +G
Sbjct: 394 DVMDLKSKMEGKG 406



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
           F +  ++++ VK  R        +Q   +G+  D+ + + LIN +C    +  A+ +   
Sbjct: 62  FLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFAN 121

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGK 369
           + K+G+  +  T   LI GLC  G IK A   L + +K+   GF  +  +Y  +++ L K
Sbjct: 122 ILKRGYHPNAITLNTLIKGLCFCGEIKRA---LHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 370 DGKIDHAINVFESME---VK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
            G+      +   +E   VK D   Y++++H LCK K L  A  L    +  G+      
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
              ++ G    G  +EA  + +++++  I+
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNIN 268


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 207/437 (47%), Gaps = 8/437 (1%)

Query: 17  FCKANRLEKAEAIIIDGI-RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG--- 72
            C A R+++A  I++  +   G   +V++YN+L+   C     +    +++ M + G   
Sbjct: 138 LCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGS 197

Query: 73  ISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEAN 132
            +P+VVTY ++I G  +  ++  +  +   M++ G+ P+  +Y  L+H     GK  E  
Sbjct: 198 HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVV 257

Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
           ++ Q+M    L P    + ++L+ LCKN     A  +F  L + G  P +  Y IL+ G 
Sbjct: 258 QMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGY 317

Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG 252
              G L      L  +  +G +P+   +  +     +       + I   M+++  +   
Sbjct: 318 ATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGV 377

Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
             Y  +I A  K+GR+ +A     QM+ +GV  DI  +++L+   C   K E A  L  E
Sbjct: 378 VNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFE 437

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           +  QG   +     IL+  LC+ G +  A+  ++ M ++    ++ +YN +VD     G+
Sbjct: 438 VLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGR 497

Query: 373 IDHA---INVFESMEVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
           ID A   ++V  S+ +K D FTY++++H  CKA+R+  A  L    L  G+         
Sbjct: 498 IDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNT 557

Query: 429 VVDGLRHSGCRREAKKI 445
           ++ GL   G   EAK++
Sbjct: 558 ILHGLFQIGRFCEAKEL 574



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 186/401 (46%), Gaps = 4/401 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CKA  +++A+ +    I  GV P+  TY  LI  Y     +     +L  M   G+ PD
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y  L+    +N   + + ++ D ++  GI P V  Y  L+H     G   E +    
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+   ++P    FNIM N   K    D A+ +F  +++    P +V Y  LI  LCK G
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A     ++ + G  P+   +++++       K++   ++   +  +G   +   + 
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++    + GR+ EA   ++ M+   V+ D++SYNTL++ +C  G+++ A  LLD M   
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G + D++T+  L+ G CKA  I  A      M   G    +  YN I+  L + G+   A
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571

Query: 377 ----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
               +N+  +    D +TY+ +++ LC+   +  A K+  S
Sbjct: 572 KELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQS 612



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 181/367 (49%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R GV PD   +N++ +AY +    D    I ++MR+  +SP VV Y +LI    +   +
Sbjct: 334 VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRV 393

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             ++   ++M+  G+ PD++ ++SL++ L  + K ++A ++F +++   +    A FNI+
Sbjct: 394 DDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNIL 453

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +  LC+      A R+   + +    P++++YN L+ G C  GR+  A  +L  +   G 
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGL 513

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  TY T++    + R+      +   M  KG T     Y T++    +IGR  EA +
Sbjct: 514 KPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M+ +  + DI +Y  ++N  C+   ++ A+ +   +  +  + D +T  I+I  L 
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALL 633

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
           K G  + A      ++  G   ++E Y  I + L K+G ++    +F +ME   +   S 
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSR 693

Query: 394 MVHNLCK 400
           M++ L +
Sbjct: 694 MLNALVR 700



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 197/425 (46%), Gaps = 4/425 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R  +A  I    IR G+ P V  Y +L+  Y    +    ++ L+ M   G+SPD
Sbjct: 282 LCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPD 341

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              +N +     + +++  ++ + D+M +  + P V +Y +L+  L +LG+ D+A   F 
Sbjct: 342 HHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFN 401

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   +TP    F+ ++ GLC     + A ++F  +   G       +NIL+  LC+ G
Sbjct: 402 QMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREG 461

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+  A+ ++  +      P+ I+Y T++       +     ++L  M   G   D F Y 
Sbjct: 462 RVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYN 521

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  + K  R+ +A     +M+  G+   +V+YNT+++   + G+   A  L   M   
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             +CD YT+TI+++GLC+   +  A    + +       ++   N ++  L K G+ + A
Sbjct: 582 RRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDA 641

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++F ++     V D  TY  +  NL K   L    +L  +  ++G         A+V  
Sbjct: 642 MDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 433 LRHSG 437
           L H G
Sbjct: 702 LLHRG 706



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 149/296 (50%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           +L+    NI +C  C+  R+ +A+ +I   +R+ V PDV++YN L+D +C     D    
Sbjct: 444 RLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L+ M   G+ PD  TYN+L+ G  +   +  +  L  EML  G+ P V +YN+++H LF
Sbjct: 504 LLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLF 563

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           Q+G+  EA  ++ +MI         T+ I+LNGLC+N + D A +MF+ L       ++ 
Sbjct: 564 QIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIF 623

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           T NI+I  L K GR   A  +   +   G  P+  TY  I +   +    +   E+ SAM
Sbjct: 624 TINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAM 683

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
           +  G   +      ++   +  G +  A  Y+ ++      L+  + + LI++Y +
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 177/389 (45%), Gaps = 43/389 (11%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVL-PDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           + NI    + K   +++A  I  D +R   L P VV Y  LIDA C+    D      N+
Sbjct: 344 IFNIMFNAYAKKAMIDEAMHIF-DKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQ 402

Query: 68  MREAGISPDVVTYNSLIAG-------------------------ATRNSLLSCSL----- 97
           M   G++PD+  ++SL+ G                         A   ++L C+L     
Sbjct: 403 MINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGR 462

Query: 98  -----DLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
                 L+D ML + + PDV SYN+L+  HCL   G+ DEA ++   M+   L P   T+
Sbjct: 463 VMEAQRLIDLMLRVDVRPDVISYNTLVDGHCL--TGRIDEAAKLLDVMVSIGLKPDEFTY 520

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           N +L+G CK R  D+A  +FR +   G  P +VTYN ++ GL + GR   A+ +   + +
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMIN 580

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
           +    +  TYT I+    RN       ++  ++  K    D F    +I A +K GR ++
Sbjct: 581 NRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKED 640

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A D    +   G+  D+ +Y  +     KEG LE    L   ME+ G   +      L+ 
Sbjct: 641 AMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVR 700

Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            L   G+I  A ++L  +++  F  +LEA
Sbjct: 701 WLLHRGDIGRAGVYLSKLDEKNF--SLEA 727



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-------GHAPN 216
           D+AL++F  +  +     + T+N L+  + +A R  +A  ++  L +          AP+
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRA-RCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG---FGYCTVIAAFVKIGRLKEATD 273
           + TYT ++ C  R  + K G      + + G++ +    FG   ++       R+ EATD
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFG--QLLKGLCDAKRVDEATD 149

Query: 274 -YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG---FECDKYTHTILI 329
             + +M   G  L+++SYN L+   C E + E A  L+  M   G      +  T+T +I
Sbjct: 150 ILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---- 385
           DGLCKA  +  A+   ++M   G   N   Y C++      GK    + + + M      
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            D   Y+ ++  LCK  R   A  +  S ++ G++
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIK 304


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 208/450 (46%), Gaps = 44/450 (9%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           L  I +  + +A   E+A          G  P V  YN ++DA      F     I N M
Sbjct: 110 LFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNM 169

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +  GI  +V TYN L+    +N  +  +  LL EM   G  PD  SY +++  + +LGK 
Sbjct: 170 KRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKV 229

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +EA  +   M      P    +N ++NG C+    +    +F  +   G  P+++TY+ +
Sbjct: 230 EEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTV 284

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I  L + G +  A  +L ++   G +PN  T+T++MK                     GY
Sbjct: 285 INTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMK---------------------GY 323

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
            F G             GRL EA D   +M+ +G + + V+YNTLI+  C  GK+  A  
Sbjct: 324 -FMG-------------GRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +  +ME+ G   ++ T++ LIDG  KAG++ GA      M   G   N+  Y C+VD L 
Sbjct: 370 VSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLC 429

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           ++   +HA+++ E+M       ++ T+++ +  LC + +   A K+L    + G     +
Sbjct: 430 RNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVT 489

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
               V+DGL ++   REA +I  +I   +I
Sbjct: 490 TYNEVLDGLFNAKRTREALQIVGEIEEMEI 519



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 198/428 (46%), Gaps = 16/428 (3%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V + C+  ++E+A  +      + +   V  YN LI+ +C+    +  + + N M   GI
Sbjct: 220 VSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGI 274

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDV+TY+++I   +    +  +L +L +M   G  P+V ++ SLM   F  G+  EA  
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALD 334

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           ++  MI     P T  +N +++GLC       A+ + + ++++G  P   TY+ LI G  
Sbjct: 335 LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFA 394

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           KAG L  A  I  ++  +G  PN + YT ++    RN  +   L ++  M       +  
Sbjct: 395 KAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTI 454

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            + T I      G+ + A   + QM   G   ++ +YN +++      +   A  ++ E+
Sbjct: 455 TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI---GFDSNLEAYNCIVDRLGKD 370
           E+   + +  T+  ++ G C AG  KGA   L+   K+   G   +   YN ++    K 
Sbjct: 515 EEMEIKSNLVTYNTILSGFCHAGMFKGA---LQIAGKLLVGGTKPDSITYNTVIYAYCKQ 571

Query: 371 GKIDHAINVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
           G++  AI + + +  K     D FTY+S++  +C    +  A   L   +  G+   ++ 
Sbjct: 572 GEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRAT 631

Query: 426 QKAVVDGL 433
             A+V GL
Sbjct: 632 WNALVRGL 639



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 189/426 (44%), Gaps = 14/426 (3%)

Query: 2   FG-KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
           FG K S ++ N  +      N+ +    I  +  R G+  +V TYNML+ A C+    DA
Sbjct: 137 FGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDA 196

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM--LEMGIPPDVWSYNSL 118
              +L  M   G  PD V+Y ++++         C L  ++E   L M I   V  YN+L
Sbjct: 197 ARKLLAEMSYKGCIPDAVSYTTVVSSM-------CRLGKVEEARELSMRIKSFVPVYNAL 249

Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
           ++   +  K +E   +F +M    + P   T++ ++N L +    + AL +   +   G 
Sbjct: 250 INGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGC 309

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
            P + T+  L+KG    GRL  A  +   +   G  PN + Y T++       K    + 
Sbjct: 310 SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369

Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
           +   M+R G   +   Y T+I  F K G L  A++   +M+T+G   ++V Y  ++++ C
Sbjct: 370 VSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLC 429

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           +      A  L++ M       +  T    I GLC +G  + A   L  M + G   N+ 
Sbjct: 430 RNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVT 489

Query: 359 AYNCIVDRLGKDGKIDHAINV---FESMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSC 414
            YN ++D L    +   A+ +    E ME+K +  TY++++   C A     A ++    
Sbjct: 490 TYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKL 549

Query: 415 LKSGVR 420
           L  G +
Sbjct: 550 LVGGTK 555



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 2/306 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +T   N  +   C   ++ +A ++     R GV P+  TY+ LID + +         I 
Sbjct: 347 NTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIW 406

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           N+M   G  P+VV Y  ++    RNS+ + +L L++ M     PP+  ++N+ +  L   
Sbjct: 407 NKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCS 466

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK + A +V   M      P   T+N +L+GL   + T  AL++   +++      LVTY
Sbjct: 467 GKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTY 526

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N ++ G C AG  + A  I  +L   G  P++ITY T++    +  + K  ++++  + +
Sbjct: 527 NTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTK 586

Query: 246 KGYTF-DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI-NLYCKEGKL 303
           KG  + D F Y +++        + EA  ++++M+ +G+  +  ++N L+  L+ K G L
Sbjct: 587 KGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHL 646

Query: 304 EAAYLL 309
              +++
Sbjct: 647 GPIHIV 652



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 34/335 (10%)

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+  M+  L   R  D    + + ++  G       + I+I    +AG    A      +
Sbjct: 75  TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRI 134

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
           G+ G  P+   Y  ++       K+++   I + MKR G   + + Y  ++ A  K  R+
Sbjct: 135 GEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRV 194

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTL------------------------------INLYC 298
             A   + +M   G   D VSY T+                              IN +C
Sbjct: 195 DAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFC 254

Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
           +E K+E  + L +EM  +G + D  T++ +I+ L + GN++ A   L  M   G   N+ 
Sbjct: 255 REHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVH 314

Query: 359 AYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
            +  ++      G++  A++++  M       ++  Y++++H LC   ++  A  +    
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM 374

Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            ++GV   ++    ++DG   +G    A +I +K+
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM 409



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
           ++Y T+I     E  ++    LL  M+ +G  C++    I+I+   +AG  + A      
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 403
           + + G   +++ YN ++D L  + K      ++ +M+      + +TY+ ++  LCK  R
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 404 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
           + +A KLL      G      +   VV  +   G   EA+++  +I+
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIK 240


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 153/287 (53%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF  +++G CKN   D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +      P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++     +P+ ITY T++    +    K   
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D   Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG +L L+ M + G   +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKL-LKEMQRDGHVPS 421

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 422 VVTYNVLMN 430



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +  + D   Y T+I    K G LK+A   +++M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D ++Y TLI+  CKEG L++A+     M ++    D+  +T LI GLC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ-RDGHVPSVVTYNV 427



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 111/214 (51%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK ++++ A  +  + +  G++P+ VT+  LID +C+    D    I  +M  
Sbjct: 216 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             +SPD++TYN+LI G  +   L  +  L+DEM   G+ PD  +Y +L+    + G  D 
Sbjct: 276 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDS 335

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + MI  ++      +  +++GLC+   + +A +M R +   G  P+  TY ++I 
Sbjct: 336 AFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIIN 395

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
             CK G +     +LKE+   GH P+ +TY  +M
Sbjct: 396 EFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLM 429



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDE 352

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G++
Sbjct: 353 VAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 141/300 (47%), Gaps = 4/300 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F+ ++    ++ +  +A+  +R  ++H F     T   +++ L K    +      +E+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G+  +   +  +M    ++   +J   +  A+ + G       Y T++  ++++G L 
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           E       M+  GVQ D+ +Y+ LIN  CKE K++ A  L DEM  +G   +  T T LI
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 254

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CK G +  A    + M       +L  YN ++  L K G +  A ++ + M VK   
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLK 314

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY++++   CK   L SA +     ++  +R+ + A  A++ GL   G   +A+K+
Sbjct: 315 PDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKM 374



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 90/174 (51%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   + PD++TYN LI   C+       + +++ M   G+ PD 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P   T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 72/146 (49%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD +TY  LID  C+    D+ +    RM +
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD  +Y  +++   + G   +
Sbjct: 346 ENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
             ++ ++M      P   T+N+++NG
Sbjct: 406 GXKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 196/403 (48%), Gaps = 5/403 (1%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +  + LN  +   CK   L++A  +    +   +LPD  TY +L+D +C+         +
Sbjct: 523 IDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALIL 582

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLF 123
           L  M E G+ PD + Y  L+ G      +  +  +  E++ + G+  D  +YNS+M+   
Sbjct: 583 LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 642

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G+ +E  R+ ++M   ++ P +A++NI+++G  K       L ++R + K G  P+ V
Sbjct: 643 KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 702

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TY +LI GLC+ G +  A   L+++   G  P+ + +  ++K      K    L++ S M
Sbjct: 703 TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 762

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
           K    +     Y  ++   ++   L+++ + +  MV  G+Q     Y  LIN  C+ G +
Sbjct: 763 KWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDI 822

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
           + A+ L ++M+  G    +   + ++ GLCK G ++ A +    + + G    +  +  +
Sbjct: 823 DGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTL 882

Query: 364 VDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 402
           +  L K+ KID A ++ + ME      D  TY+ ++  LC  K
Sbjct: 883 MHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 925



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 200/437 (45%), Gaps = 52/437 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C   +L KAE+++   ++   LP+ VTYN +++ Y +     +   IL+ M +
Sbjct: 234 NIVLNSLCTQGKLSKAESML-QKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI  D+ TYN +I    +    + +  LL  M E+ + PD  SYN+L+H  F  GK + 
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F  M+   L P  AT+  +++G C+N  TD A R+   +Q  G  P  V+      
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVS------ 406

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTI------------------MKCCFRNRK 232
                     A+ ILK +   G  P+ ITY+ +                  MK  F    
Sbjct: 407 ---------KAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVAS 457

Query: 233 YKL-------------GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           +                  +   M R G+  D   Y +++    + G L +A ++M  ++
Sbjct: 458 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 517

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
                +D  + NTL+   CK G L+ A  L ++M  +    D YT+TIL+DG CK G + 
Sbjct: 518 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 577

Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFTYSSM 394
            A + L+ M + G   +  AY C+++ L  +G++  A  +F+ +  K     D   Y+SM
Sbjct: 578 PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 637

Query: 395 VHNLCKAKRLPSASKLL 411
           ++   K  ++    +L+
Sbjct: 638 MNGYLKGGQINEIERLM 654



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 208/442 (47%), Gaps = 22/442 (4%)

Query: 14  VCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +CT+       C+   L +A+  ++  +      D  T N L+   C+  + D    +  
Sbjct: 490 ICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE 549

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           +M    I PD  TY  L+ G  +   +  +L LL  MLE G+ PD  +Y  L++ L   G
Sbjct: 550 KMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG 609

Query: 127 KPDEANRVFQDMIC--GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +   A+ +FQ++IC  G    C A +N M+NG  K    +   R+ R + ++   P   +
Sbjct: 610 QVKAASYMFQEIICKEGLYADCIA-YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 668

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YNIL+ G  K G+L    ++ +++   G  P+ +TY  ++         ++ ++ L  M 
Sbjct: 669 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 728

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   D   +  +I AF +  ++  A      M    +     +Y  ++N   ++  L+
Sbjct: 729 LEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQ 788

Query: 305 AAYLLLDEMEKQGFECDKYTHTI-LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
            +Y +L +M + G +  K+TH I LI+  C+ G+I GA    E M  +G   +  A + I
Sbjct: 789 QSYEILHDMVESGLQ-PKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSI 847

Query: 364 VDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA---SKLLLSCLK 416
           V  L K GK++ AI VF S+     V    T+++++H LCK  ++  A    +L+ SC  
Sbjct: 848 VRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC-- 905

Query: 417 SGVRILKSAQKAVVDGLRHSGC 438
            G+++       ++ GL +  C
Sbjct: 906 -GLKVDVVTYNVLITGLCNKKC 926



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 199/413 (48%), Gaps = 24/413 (5%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV T N+++++ C         ++L +M+   + P+ VTYN+++    +      +L +L
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           D+M + GI  D+++YN ++  L +L +   A  + + M   +LTP   ++N +++G    
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              + A+ +F  + +    P + TY  LI G C+ GR   AR +L E+  +G  P  ++ 
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
                            +IL  M   G   D   Y    +A +  G + EA  + + M  
Sbjct: 408 AK---------------QILKCMLADGIDPDVITY----SALINEGMIAEAEQFKQYMSR 448

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
             +  D+ S+N +I+ YC+ G +  A+ + D M + G+  D  T+  L+ GLC+ G++  
Sbjct: 449 MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 508

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A+  + Y+ +     + +  N ++  + K G +D A+++ E M  +    D++TY+ ++ 
Sbjct: 509 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 568

Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
             CK  ++  A  LL   L+ G+     A   +++GL + G  + A  +  +I
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 621



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 189/391 (48%), Gaps = 40/391 (10%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           R+ +  DV ++N +ID+YCQ  +    +++ + M   G  PD+ TY SL+ G  +   L 
Sbjct: 448 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 507

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            + + +  +LE     D  + N+L+  + + G  DEA  + + M+  ++ P T T+ I+L
Sbjct: 508 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 567

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G CK      AL + + + + G VP+ + Y  L+ GL   G+++ A ++ +E+      
Sbjct: 568 DGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI------ 621

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
                                       + ++G   D   Y +++  ++K G++ E    
Sbjct: 622 ----------------------------ICKEGLYADCIAYNSMMNGYLKGGQINEIERL 653

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           M  M  + V     SYN L++ Y K+G+L     L  +M K+G + D  T+ +LI GLC+
Sbjct: 654 MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 713

Query: 335 AGNIKGARLHLEYMNKIG-FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
            G I+ A   LE M   G F  NL A++ ++    +  K+ +A+ +F  M+       S 
Sbjct: 714 YGLIEIAVKFLEKMVLEGVFPDNL-AFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSK 772

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           TY +MV+ L +   L  + ++L   ++SG++
Sbjct: 773 TYVAMVNGLIRKNWLQQSYEILHDMVESGLQ 803



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 154/348 (44%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D + YN +++ Y +    +    ++  M E  + P   +YN L+ G  +   LS +
Sbjct: 626 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 685

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           L L  +M++ GI PD  +Y  L+  L + G  + A +  + M+   + P    F+I++  
Sbjct: 686 LYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKA 745

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             +     NAL++F  ++     P   TY  ++ GL +   L+ +  IL ++ +SG  P 
Sbjct: 746 FSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPK 805

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
              Y  ++    R        E+   MK  G         +++    K G+++EA     
Sbjct: 806 HTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFS 865

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            ++  G+   I ++ TL++  CKE K++ A+ L   ME  G + D  T+ +LI GLC   
Sbjct: 866 SIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 925

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
            I  A    E M   G   N+  Y  +   +   G +     + + +E
Sbjct: 926 CICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIE 973



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 1/320 (0%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S+   NI +  + K  +L +   +  D ++ G+ PD VTY +LI   C++   +     L
Sbjct: 665 SSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFL 724

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
            +M   G+ PD + ++ LI   +  S +S +L L   M  + + P   +Y ++++ L + 
Sbjct: 725 EKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRK 784

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
               ++  +  DM+   L P    +  ++N  C+    D A  +   ++  G VP  V  
Sbjct: 785 NWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAE 844

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + +++GLCK G++  A  +   +  +G  P   T+TT+M    +  K      +   M+ 
Sbjct: 845 SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 904

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   D   Y  +I        + +A D  E+M + G+  +I +Y TL       G ++ 
Sbjct: 905 CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 964

Query: 306 AYLLLDEMEKQGFECDKYTH 325
              LL ++E +G     Y H
Sbjct: 965 GEKLLKDIEDRGI-VPSYKH 983



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 156/331 (47%), Gaps = 26/331 (7%)

Query: 96  SLDLLDEMLEM-GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
           +L +LD +++  G+      Y   +H L Q   P +A  V + +     + C+A F+ +L
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFS-CSAIFSSLL 149

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
             + +   T+                 L + ++L+    K G++  A   +  + + G  
Sbjct: 150 RTISRCDPTN-----------------LFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFK 192

Query: 215 PNAITYTTIMKCCFR-NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            +  +   I+      N+   + L +  ++ RK +  D      V+ +    G+L +A  
Sbjct: 193 ASLFSCNNILNALVGINKSEYVWLFLKESLDRK-FPLDVTTCNIVLNSLCTQGKLSKAES 251

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
            +++M    +  + V+YNT++N Y K+G+ ++A  +LD+MEK G E D YT+ I+ID LC
Sbjct: 252 MLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLC 310

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDSF- 389
           K      A L L+ M ++    +  +YN ++     +GKI+ AI +F  M    +K S  
Sbjct: 311 KLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           TY++++   C+  R   A ++L     +GVR
Sbjct: 371 TYTALIDGYCRNGRTDEARRVLYEMQITGVR 401



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 137/311 (44%), Gaps = 23/311 (7%)

Query: 166 ALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT--- 221
           ALRM   + Q+ G       Y + +  L +A     A  +L+ L  +G + +AI  +   
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLR 150

Query: 222 TIMKCCFRN--------RKYKLGLEILSA------MKRKGYTFDGFGYCTVIAAFVKIGR 267
           TI +C   N          Y    ++L A      M   G+    F    ++ A V I +
Sbjct: 151 TISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK 210

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
            +    ++++ +     LD+ + N ++N  C +GKL  A  +L +M+      +  T+  
Sbjct: 211 SEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNT 269

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
           +++   K G  K A   L+ M K G +++L  YN ++D+L K  +   A  + + M    
Sbjct: 270 ILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN 329

Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
              D  +Y++++H      ++  A  +    L+  ++   +   A++DG   +G   EA+
Sbjct: 330 LTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEAR 389

Query: 444 KIQSKIRMAKI 454
           ++  ++++  +
Sbjct: 390 RVLYEMQITGV 400


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 202/420 (48%), Gaps = 4/420 (0%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           +R+G  P+VVT++ LIDAYC+  + D  + + + M   G++PD++ Y+ LI G  +   L
Sbjct: 299 VRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRL 358

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
                LL   L+ GI  DV  ++S M    ++G      ++++ M+   ++P   + +I+
Sbjct: 359 EDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSIL 418

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           + G C+N     A  +F  + K GF P ++TY+ LI G CK+G LR   ++ +++     
Sbjct: 419 IKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRC 478

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+ I Y+ ++    +       L        +G + + F   T++ +F ++  +  A  
Sbjct: 479 EPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMK 538

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M    ++ D V+Y  LI    + G+++ A +L  +M K+ F+ D  T+  LIDGLC
Sbjct: 539 VYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLC 598

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSF 389
           K           ++M K     ++  YN +++   ++G ++ A+ +F    E     D F
Sbjct: 599 KLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVF 658

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           T+++M+   C  KRL  A +L        +R        ++D     G   +A  + SK+
Sbjct: 659 TFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKM 718



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 200/429 (46%), Gaps = 5/429 (1%)

Query: 19  KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
           KA RLE  + +++  +  G+  DVV ++  +DAY +         I  RM   GISP+VV
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413

Query: 79  TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
           + + LI G  +N  +  +  L  ++L++G  P + +Y++L+    + G   +   +++DM
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473

Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
           I     P T  +++++NGLCK     +ALR F      G  P + T N L+   C+   +
Sbjct: 474 IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
             A  +   +G      + +TYT ++K   +  +    L +   M +K +  D   YCT+
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593

Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
           I    K+ +        + M  + V  DI  YN LIN++ +EG LEAA  L   + ++G 
Sbjct: 594 IDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGP 653

Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
           + D +T   +I   C    +  A      M       N   +  ++D   ++G++D A+ 
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAML 713

Query: 379 VFESM----EVKDSFTYSSMVHNLCKAKR-LPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           +F  M       +  TYS ++H   K++  + S  KL    L++ +     +   ++DGL
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 434 RHSGCRREA 442
              G  +EA
Sbjct: 774 CKRGLMKEA 782



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 200/407 (49%), Gaps = 9/407 (2%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  FC+  R+ +A  + +  ++LG  P ++TY+ LI  +C+  +   G+ +   M +
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIK 475

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               PD + Y+ LI G  +  L+  +L    + +  G+ P+V++ N+L+    +L     
Sbjct: 476 KRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVG 535

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A +V+  M   ++   T T+ I++ G  +    D AL +F  + K  F P+++TY  LI 
Sbjct: 536 AMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLID 595

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK  +      I   +  +  AP+   Y  ++    R    +  L +   +  +G   
Sbjct: 596 GLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKP 655

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D F + T+I  +    RL +A     +M ++ ++ + +++  LI+ +C+EG+++ A L+ 
Sbjct: 656 DVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMF 715

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNI--KGARLHLEYM-NKIGFDSNLEAYNCIVDRL 367
            +M ++G E +  T++ LI G  K+ ++   G +L+ E + N I    N+ +Y+ ++D L
Sbjct: 716 SKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIA--PNIVSYSILIDGL 773

Query: 368 GKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKL 410
            K G +  A   F    +   + D   Y+ ++   CK  RL  A  L
Sbjct: 774 CKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMML 820



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 36/308 (11%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
           R+++A  +    ++    PDV+TY  LID  C+     AG  I + M +  ++PD+  YN
Sbjct: 567 RVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYN 626

Query: 82  SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
            LI   +R   L  +L L   ++E G  PDV+++N+++ C     + D+A ++F  M   
Sbjct: 627 VLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSE 686

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA-GRLRT 200
            L P   TF I+++  C+    D+A+ MF  + + G  P LVTY+ LI G  K+   + +
Sbjct: 687 QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMES 746

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
              +  E+ ++  APN ++Y+ ++                             G C    
Sbjct: 747 GLKLYNEMLENNIAPNIVSYSILID----------------------------GLC---- 774

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
              K G +KEA+      +   +  D+++Y  LI  YCK G+L  A +L D M       
Sbjct: 775 ---KRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTP 831

Query: 321 DKYTHTIL 328
           D++    L
Sbjct: 832 DRFLERTL 839



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 169/378 (44%), Gaps = 36/378 (9%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T + ++ +   CK   +  A       +  G+ P+V T N L+D++C+         +  
Sbjct: 482 TIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY 541

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M    I  D VTY  LI GA +   +  +L L  +ML+    PDV +Y +L+  L +L 
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K      +F  M    + P  A +N+++N   +  + + AL +F  + + G  P++ T+N
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFN 661

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            +I   C   RL  A  +  ++      PNAIT+T +                       
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTIL----------------------- 698

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-EGKLEA 305
                       I AF + GR+ +A     +M+ +G + ++V+Y+ LI+ Y K +  +E+
Sbjct: 699 ------------IDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMES 746

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
              L +EM +     +  +++ILIDGLCK G +K A              ++ AY  ++ 
Sbjct: 747 GLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIR 806

Query: 366 RLGKDGKIDHAINVFESM 383
              K G++  A+ ++++M
Sbjct: 807 GYCKVGRLTEAMMLYDNM 824



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 12/376 (3%)

Query: 43  VTYNMLIDAYCQFVSFDAGYTILNRMREAGI--SPDVV--TYNSLIAGATRNSLLSCSLD 98
           V Y  LI++YC+   FD    I   +   GI  SP+VV     SLI       ++    +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           L   M E   P  V+ +  +M+     G+ +   R  + ++ G       T N +L G+ 
Sbjct: 228 LCSAMREQ--PFSVYEF--VMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                  A   F  + + G  P +VT++ LI   CK G L  A  +   +  +G  P+ I
Sbjct: 284 MQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            Y+ ++   F+  + + G  +L     KG   D  G+ + + A+VKIG L       ++M
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           + +G+  ++VS + LI  +C+ G++  A  L  ++ K GFE    T++ LI G CK+GN+
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNL 463

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
           +      E M K   + +   Y+ +++ L K G +  A+  F     +    + FT +++
Sbjct: 464 RDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTL 523

Query: 395 VHNLCKAKRLPSASKL 410
           + + C+ K +  A K+
Sbjct: 524 LDSFCRLKCIVGAMKV 539



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 178/431 (41%), Gaps = 47/431 (10%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVL--PDVVTYNM--LIDAYCQFVSFDAGYTILNRMREA 71
           ++C+    +K+  I +     G+   P+VV   +  LID++C  V  D    + + MRE 
Sbjct: 176 SYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQ 235

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
             S     Y  ++        +   L     +++ G   D+ + N ++  ++       A
Sbjct: 236 PFS----VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVA 291

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           +  F  ++     P   TF+ +++  CK    D A  +F  +  +G  P+L+ Y+ILI G
Sbjct: 292 DDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDG 351

Query: 192 LCKAGRLRTARWIL-----------------------------------KELGDSGHAPN 216
           L KAGRL   + +L                                   K + + G +PN
Sbjct: 352 LFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPN 411

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            ++ + ++K   +N +      +   + + G+      Y  +IA F K G L++     E
Sbjct: 412 VVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYE 471

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M+    + D + Y+ LIN  CK+G +  A     +   +G   + +T   L+D  C+  
Sbjct: 472 DMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLK 531

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I GA      M  +   ++   Y  ++    + G++D A+ +F  M  K    D  TY 
Sbjct: 532 CIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYC 591

Query: 393 SMVHNLCKAKR 403
           +++  LCK K+
Sbjct: 592 TLIDGLCKLKK 602


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 23/433 (5%)

Query: 11  NICVCTFCKANRLEKA-EAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           NI +   C  NR ++A E + I     G   PDVV+Y+ +I+ +     F  G   L++M
Sbjct: 55  NILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF-----FKEGD--LDKM 107

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            +  ISP+VVTYNS+IA   +   +  ++++L  M++ G+ PD  +YNS++H     G+P
Sbjct: 108 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQP 167

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA    + M    + P   T+N +++ LCKN     A ++F  + K G  P++ TY  L
Sbjct: 168 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTL 227

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           ++G    G L     +L  +  +G  PN   ++ ++    +  K +  + + S M+++G 
Sbjct: 228 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 287

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             +   Y TVI    K GR+++A  Y EQM+ +G++ D + YN+LI+  C   K E A  
Sbjct: 288 NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE 347

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L  EM  +G          +ID  CK G +  +    + M +IG   ++           
Sbjct: 348 LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL-------- 399

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             G+ D A ++F +      V + +TY  M  N+     L    +L LS   +G  +   
Sbjct: 400 --GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 457

Query: 425 AQKAVVDGLRHSG 437
               +V  L   G
Sbjct: 458 MLNFIVRELLQRG 470



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 19/355 (5%)

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNG 156
           + DE+L  GIP DV+SYN L++ L    +  EA  +   M    GD  P   +++ ++NG
Sbjct: 39  VFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
             K    D  L            P +VTYN +I  LCKA  +  A  +L  +  SG  P+
Sbjct: 98  FFKEGDLDKML-------DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TY +I+     + + K  +  L  M+  G   D   Y +++    K GR  EA    +
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 210

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            M   G++ DI +Y TL+  Y  +G L   + LLD M + G   + Y  +IL+    K  
Sbjct: 211 SMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 270

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            ++ A L    M + G + N   Y  ++D L K G+++ A+  FE M  +    DS  Y+
Sbjct: 271 KVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYN 330

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           S++H+LC   +   A +L L  L  G+ +      +++D    S C +E + I+S
Sbjct: 331 SLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIID----SHC-KEGRVIES 380



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 165/382 (43%), Gaps = 25/382 (6%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CKA  ++KA  ++   ++ GV+PD +TYN ++  +C           L +MR 
Sbjct: 120 NSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS 179

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ PDVVTYNSL+    +N   + +  + D M + G+ PD+ +Y +L+      G   E
Sbjct: 180 DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVE 239

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + +   M+   + P    F+I++    K    + A+ +F  +++ G  P  VTY  +I 
Sbjct: 240 MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVID 299

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK--CCFR--NRKYKLGLEILSA---- 242
            LCK+GR+  A    +++ D G  P++I Y +++   C F    +  +L LE+L      
Sbjct: 300 VLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICL 359

Query: 243 -----------------MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
                            +   G  FD      V    + +GR  EA D      ++G+  
Sbjct: 360 STIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVP 419

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           +  +Y  +      +G LE    L   ME  G   D      ++  L + G I  A  +L
Sbjct: 420 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 479

Query: 346 EYMNKIGFDSNLEAYNCIVDRL 367
             +++  F       +  +D L
Sbjct: 480 SMIDEKHFSLEASTASLFIDLL 501



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 10/204 (4%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + +I VC + K  ++E+A  +     + G+ P+ VTY  +ID  C+    +       +M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
            + G+ PD + YNSLI           + +L  EML+ GI      +NS++    + G+ 
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            E+ ++F  M+   + P   T       L +N   D A  +F     +G VP   TY ++
Sbjct: 378 IESGKLFDLMVRIGVKPDIIT-------LGRN---DEAKDLFVAFSSNGLVPNYWTYRLM 427

Query: 189 IKGLCKAGRLRTARWILKELGDSG 212
            + +   G L     +   + D+G
Sbjct: 428 AENIIGQGLLEELDQLFLSMEDNG 451



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 6/149 (4%)

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD--SNLEAYN 361
           E A  + DE+ ++G   D +++ IL++GLC     + A   L  M   G D   ++ +Y+
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 362 CIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
            +++   K+G +D  ++   S  V    TY+S++  LCKA+ +  A ++L + +KSGV  
Sbjct: 93  TVINGFFKEGDLDKMLDQRISPNV---VTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 149

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                 ++V G   SG  +EA     K+R
Sbjct: 150 DCMTYNSIVHGFCSSGQPKEAIVFLKKMR 178


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 194/428 (45%), Gaps = 46/428 (10%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           GIR+ V P    YN LI+ YCQ  +F     +LN M E G++P   +Y+ LIAG  R   
Sbjct: 400 GIRVTVYP----YNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGD 455

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           L+ +++L  EM   G+  +V+++ +L+    + G  DEA R+F  MI   + P   TFN+
Sbjct: 456 LASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNV 515

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK---------------------- 190
           M+ G C+      A +++  +   G  P+  TY  LI                       
Sbjct: 516 MIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNC 575

Query: 191 -------------GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
                        G CK GRL     I  E+   G   + I++T I+    +    +   
Sbjct: 576 VVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKIS 635

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            +   MK KG   D   +  +I    K   + +A +  ++M+ DG   ++V+Y  LIN  
Sbjct: 636 VLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHL 695

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSN 356
           CK G L +A +L +EM    F  + +T+   +D L   G ++ A+ LH   +   G  +N
Sbjct: 696 CKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE--GCLAN 753

Query: 357 LEAYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLL 412
              +N ++    K G+I  AI++     ES    D  +YS++++ LCK   +  A +L  
Sbjct: 754 TVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWN 813

Query: 413 SCLKSGVR 420
             L  G++
Sbjct: 814 EMLYKGLK 821



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 170/363 (46%), Gaps = 4/363 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D   Y   I AYC+  + D    +L RM   G+    V YN L+ G  RN+ +  ++++ 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           + M+E GI  D  +Y +L++   +  + + A  +  DM+     P  A+ + M++GL K 
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            + D A R+   L + G VP L   N LI  LCK  R R A  + + + + G  PN +TY
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             ++    +       L +   M+ KG     + Y ++I  + +     +A   + +MV 
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+     SY+ LI   C++G L +A  L  EM + G   + YT T LI G CK GN+  
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVH 396
           A    + M       N   +N +++   + G +  A  +++ M       D++TY S++ 
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553

Query: 397 NLC 399
            LC
Sbjct: 554 VLC 556



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 186/405 (45%), Gaps = 41/405 (10%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK  R  +AE +       G+ P+ VTY +LI + C+    D    + +RMRE
Sbjct: 339 NALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMRE 398

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI   V  YNSLI G  ++     +  LL+EM+E G+ P   SY+ L+  L + G    
Sbjct: 399 KGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLAS 458

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + ++M    ++    TF  +++G CK+   D A R+F  +     VP  VT+N++I+
Sbjct: 459 AMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIE 518

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKGYT 249
           G C+ G +R A  +  ++ D G  P+  TY +++   C            L AMK K + 
Sbjct: 519 GYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL----------TLGAMKAKEFV 568

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D    C V+ +F                          S  TL+  +CKEG+L   Y +
Sbjct: 569 DDLENNCVVLNSF--------------------------SLTTLMYGFCKEGRLTETYHI 602

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
            DEM  +G + D  + T+++    K  + +   +    M + G   +   + C++D   K
Sbjct: 603 WDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSK 662

Query: 370 DGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 410
           +  I  A+N ++ M       +  TY+ ++++LCK+  L SA  L
Sbjct: 663 EENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQIL 707



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 192/411 (46%), Gaps = 31/411 (7%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +   C+ NR+ +A  +    +  G++ D VTY  L+  +C+    +    + + M  
Sbjct: 234 NVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLS 293

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
               P V + + ++ G  +   +  +  L   + E+G+ P++++ N+L+  L +  +  E
Sbjct: 294 LHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFRE 353

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A R+F+ M    L P   T+ I+++ LCK    D+AL MF  +++ G    +  YN LI 
Sbjct: 354 AERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLIN 413

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+      AR +L E+ + G AP+A +Y+ ++    R       +E+   M R G + 
Sbjct: 414 GYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSG 473

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           + + + T+I+ F K G + EA    ++M+   V  + V++N +I  YC+ G +  A+ L 
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D+M  +G   D YT+  LI  LC         L L  M    F  +LE  NC+       
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLC---------LTLGAMKAKEFVDDLEN-NCV------- 576

Query: 371 GKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
                         V +SF+ +++++  CK  RL     +       GV++
Sbjct: 577 --------------VLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKL 613



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 176/398 (44%), Gaps = 52/398 (13%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +  FCK   +++A  +    I   V+P+ VT+N++I+ YC+  +    + + ++M + G+
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 74  SPDVVTYNSLIA-----------------------------------GATRNSLLSCSLD 98
           +PD  TY SLI+                                   G  +   L+ +  
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 99  LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
           + DEM   G+  D+ S+  +++   +L   ++ + +F++M    + P       M++   
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
           K      AL  +  +   G  P +VTY +LI  LCK+G L +A+ + +E+      PN+ 
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSF 721

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
           TY   +     N       ++L A   +G   +   + T+I  F K G+++ A D M+  
Sbjct: 722 TYNCFLDF-LANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   D +SY+T+IN  CK G +  A+ L +EM  +G + D   + ILI    +  NI
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI----RWCNI 836

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVD-RLGKDGKIDH 375
            G            FD  L  Y+ +V+ +   D  ++H
Sbjct: 837 HGE-----------FDKGLGIYSDMVNLKYADDTPVNH 863


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 153/287 (53%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF  +++G CKN   D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +      P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNT 182

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++     +P+ ITY T++    +    K   
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D   Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 422 VVTYNVLMN 430



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 163/358 (45%), Gaps = 1/358 (0%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D+  ++ LI AY +              RE      + T   ++    +           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +  + D   Y T+I    K G LK+A   +++M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D ++Y TLI+  CKEG L++A+     M ++    D+  +T LI GLC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 31/271 (11%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           FNI+++  CK+     A  +F  + K G  P +V+YN L+ G  + G L     +   + 
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
            SG  P+  TY+ ++    +  K     E+   M  KG   +G  + T+I    K GR+ 
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
            A +  +QM++  +  D+++YNTLI   CK+G L+ A+ L+DEM  +G + DK T+T LI
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
           DG CK G++  A  H + M                        I   I +       D  
Sbjct: 325 DGCCKEGDLDSAFEHRKRM------------------------IQENIRL-------DEV 353

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            Y++++  LC+  R   A K+L   L  G++
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLSVGLK 384



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 4/300 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F+ ++    ++ +  +A+  +R  ++H F   + T   +++ L K    +      +E+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G+  +   +  +M    ++   +L   +  A+ + G       Y T++  ++++G L 
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           E       M+  GVQ D+ +Y+ LIN  CKE K++ A  L DEM  +G   +  T T LI
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 254

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CK G +  A    + M       +L  YN ++  L K G +  A ++ + M VK   
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLK 314

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY++++   CK   L SA +     ++  +R+ + A  A++ GL   G   +A+K+
Sbjct: 315 PDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKM 374



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 90/174 (51%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   + PD++TYN LI   C+       + +++ M   G+ PD 
Sbjct: 258 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P   T+ +++N  CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 73/146 (50%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD +TY  LID  C+    D+ +    RM +
Sbjct: 286 NTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 345

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD  +Y  +++   + G   +
Sbjct: 346 ENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 406 GSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 217/458 (47%), Gaps = 46/458 (10%)

Query: 21  NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
           +RL+  + +  + I+  + P +VTY  LI AYC+FV  +  +++  +M   GI PDVVT 
Sbjct: 301 DRLKNNDVVTQNEIK-NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTC 359

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY----NSL------------------ 118
           +S++ G  R+  L+ +  L  EM EMG+ P+  SY    NSL                  
Sbjct: 360 SSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVV 419

Query: 119 -------------MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
                        M  LF++GK  EA  VF+ ++  +L P   T++ +L+G CK    + 
Sbjct: 420 RGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMEL 479

Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
           A  + + ++K    P ++T++ +I G  K G L  A  +L+E+      PN I Y  ++ 
Sbjct: 480 AELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILID 539

Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
             F+  +  +  +    MK +        +  ++    ++GR+ EA   +  M + G+  
Sbjct: 540 GYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDP 599

Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
           DIV+Y +LI+ Y KEG   AA  ++ EM+++    D   +  LI GL + G     R   
Sbjct: 600 DIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVC 658

Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKA 401
             M ++G   +   YN I++     GK + A+++   M+    + ++ TY+ ++  LCK 
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718

Query: 402 KRLPS--ASKLLLSCL---KSGVRILKSAQKAVVDGLR 434
             +P+    K L+      +   +IL+  +K V  GL 
Sbjct: 719 GFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLE 756



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 53/399 (13%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  + +I +    +  R+++A ++IID    G+ PD+V Y  LID Y +  +  A  +I+
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIV 624

Query: 66  NRMREAGISPDVVTYNSLIAGATR----NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
             M+E  I  DVV YN+LI G  R    +    CS      M+E+G+ PD  +YN++++ 
Sbjct: 625 QEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCS-----RMIELGLAPDCITYNTIINT 679

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
               GK ++A  +  +M    + P   T+NI++ GLCK                 GFVP 
Sbjct: 680 YCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT----------------GFVPT 723

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            +T+  L+K   ++ +      I ++L  SG                  ++ K+   +L 
Sbjct: 724 PITHKFLVKAYSRSEKADKILQIHEKLVASG---------------LELKRQKV---VLD 765

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M ++G + D   Y  +I  +     +++A     QM  DG+  +I +YNTL+      G
Sbjct: 766 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 825

Query: 302 KLEAAYL----LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSN 356
            +E        L+ EM ++G   +  T+ IL+ G  + GN K    LH+E + K GF   
Sbjct: 826 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITK-GFVPT 884

Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
           L+ YN ++    K GK+  A  +   +     + +SFTY
Sbjct: 885 LKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTY 923



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 177/408 (43%), Gaps = 25/408 (6%)

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
           LI  Y     F       + MR  G+ P +  +N+L+     + L+S    +  +ML  G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           + PDV+S N L+H L ++G  D A    ++    D+     T+N ++ G C+    D   
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDID--NVTYNTVIWGFCQKGLVDQGF 182

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            +   + K G   + +T NIL+KG C+ G ++ A W++  L D G   + I   T++   
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA---------------- 271
                     E++    R     D   Y T++ AF K G L  A                
Sbjct: 243 CEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302

Query: 272 ---TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
               D + Q     +Q  +V+Y TLI  YCK   +E ++ L  +M   G   D  T + +
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSI 362

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           + G C+ G +  A +    M ++G D N  +Y  I++ L K G++  A N+   M V+  
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
             D  T ++++  L K  +   A ++  + LK  +        A++DG
Sbjct: 423 SFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 193/450 (42%), Gaps = 25/450 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F  +  + + + +  D +  GV+PDV + N+L+ + C+    D     L     
Sbjct: 98  NTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV 157

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D VTYN++I G  +  L+     LL EM++ G+  D  + N L+    ++G    
Sbjct: 158 VDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQY 215

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  V  +++ G +T      N +++G C+      A  +     +     ++VTYN L+K
Sbjct: 216 AEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLK 275

Query: 191 GLCKAGRLRTARWILKEL----GDSGH---------------APNAITYTTIMKCCFRNR 231
             CK G L  A  +  E+     D                   P  +TYTT++    +  
Sbjct: 276 AFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFV 335

Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
             +    +   M   G   D     +++  F + G+L EA     +M   G+  + VSY 
Sbjct: 336 GVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYA 395

Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           T+IN   K G++  A+ L  +M  +G   D  T T ++DGL K G  K A    E + K+
Sbjct: 396 TIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKL 455

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
               N   Y+ ++D   K GK++ A  V + ME +    +  T+SS+++   K   L  A
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515

Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             +L   ++  V         ++DG   +G
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAG 545



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 31/278 (11%)

Query: 34  IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
           I LG+ PD +TYN +I+ YC     +    ILN M+  GI P+ VTYN LI G  +   +
Sbjct: 662 IELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFV 721

Query: 94  SCSL------------DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
              +            +  D++L++        +  L+    +L +      V  +M+  
Sbjct: 722 PTPITHKFLVKAYSRSEKADKILQI--------HEKLVASGLELKR---QKVVLDEMVKR 770

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG----R 197
            ++    T+N ++ G C   + + AL+ +  +   G  P + TYN L+ GL  AG     
Sbjct: 771 GISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEM 830

Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFR--NRKYKLGLEILSAMKRKGYTFDGFGY 255
           +     ++ E+ + G  PNA TY  ++    R  NRK  + L I   M  KG+      Y
Sbjct: 831 MEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI--EMITKGFVPTLKTY 888

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
             +I+ + K G++ EA + +  ++T G   +  +Y+ L
Sbjct: 889 NVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 4/174 (2%)

Query: 22  RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
            L++ + ++ + ++ G+  D+VTYN LI  YC     +      ++M   GI+P++ TYN
Sbjct: 756 ELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYN 815

Query: 82  SLIAGATRNSL----LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
           +L+ G +   L    +  +  L+ EM E G+ P+  +Y+ L+    ++G   +   +  +
Sbjct: 816 TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIE 875

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           MI     P   T+N++++   K+     A  +   L   G +P   TY+IL  G
Sbjct: 876 MITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 929



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 6/182 (3%)

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           +CT+I  ++   R   A+     M   G+   +  +NTL+  +   G +    L+  +M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
             G   D ++  +L+  LCK G++  A  +L   + +  D+    YN ++    + G +D
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDN--VTYNTVIWGFCQKGLVD 179

Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
               +   M  +    DS T + +V   C+   +  A  ++ + +  GV         ++
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 431 DG 432
           DG
Sbjct: 240 DG 241


>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 544

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 194/419 (46%), Gaps = 4/419 (0%)

Query: 35  RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
           RL +     TYNML+ + CQ    ++   + + MR  G  PD      L++         
Sbjct: 101 RLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFD 160

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            S +LL E    G+  DV  YN+ ++ L +  + D+A  +F++++         TFNI++
Sbjct: 161 VSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILI 220

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGH 213
            GLC     D A  +   +   G  P++VTYNIL+ GLC+  ++  AR +L+E+      
Sbjct: 221 RGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEF 280

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           APN ++YTT++    R  K      +   M R G   + F +  ++  FVK G +  A  
Sbjct: 281 APNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALG 340

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
             ++++  G   ++++  +LIN YC+ G +     L  EM  +    + YT+++LI  LC
Sbjct: 341 MHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALC 400

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---DSFT 390
           K+  ++ AR  L  + +         YN ++D   K G ID A  +   ME K   D  T
Sbjct: 401 KSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKCKPDKLT 460

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           ++ ++   C   R P A  +    L SG        + +   L  SG   EA +I+  +
Sbjct: 461 FTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKETL 519



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 169/337 (50%), Gaps = 4/337 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           +RLL   V +F  A+R + ++ ++ +    GV  DV+ YN  ++   +    D    +  
Sbjct: 143 SRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFR 202

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            +  +    D  T+N LI G      +  + +LL +M   G  PD+ +YN L+H L ++ 
Sbjct: 203 ELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRID 262

Query: 127 KPDEANRVFQDM-ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           + D A  + +++ +  +  P   ++  +++G C+    D A  +F  + + G  P + T+
Sbjct: 263 QVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTF 322

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + L+ G  KAG + +A  + K++   G APN IT T+++    R      GL++   M  
Sbjct: 323 SALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNA 382

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-VTDGVQLDIVSYNTLINLYCKEGKLE 304
           +    + + Y  +I+A  K  RL+EA + +  +  +D V L  V YN +I+ YCK G ++
Sbjct: 383 RNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFV-YNPVIDGYCKSGNID 441

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            A  ++ EME++  + DK T TILI G C  G    A
Sbjct: 442 EANAIVAEMEEKC-KPDKLTFTILIIGHCMKGRTPEA 477



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 141/287 (49%), Gaps = 4/287 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDG-IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI +   C+ +++++A  ++ +  ++    P+VV+Y  +I  YC+    D   ++   M 
Sbjct: 252 NILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMV 311

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
            +G  P+V T+++L+ G  +   ++ +L +  ++L  G  P+V +  SL++   + G  +
Sbjct: 312 RSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVN 371

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
               ++++M   ++     T++++++ LCK+     A  + R L++   VP    YN +I
Sbjct: 372 HGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVI 431

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTT-IMKCCFRNRKYKLGLEILSAMKRKGY 248
            G CK+G +  A  I+ E+ +    P+ +T+T  I+  C + R  +  + I   M   G 
Sbjct: 432 DGYCKSGNIDEANAIVAEMEEKC-KPDKLTFTILIIGHCMKGRTPE-AIGIFYKMLASGC 489

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           T D     T+ +  +K G   EA    E +  +   +   SY+  +N
Sbjct: 490 TPDDITIRTLSSCLLKSGMPGEAARIKETLFENQESILKKSYHESMN 536


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 211/478 (44%), Gaps = 39/478 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           +I +  F    +++K   + ++ I  G+ PDVVTY  +ID  C+   FD    +  +M +
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G  P+  TYN LI G          + +L+EM   G+ PD ++Y SL++ L + G+  E
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE 322

Query: 131 ANRVFQDMICGDLTPCTATFNIML---------------------NGLCKNRYT------ 163
           A   F  MI   + P  +T+ I++                     NGL  + +       
Sbjct: 323 ARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFS 382

Query: 164 --------DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                   D A+ +F  +++HG  P +V Y  LI  LCK GR+  A     ++ + G  P
Sbjct: 383 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 442

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N + + +++       K++   E++  M  +G   +   + T+I     +GR+ E    +
Sbjct: 443 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 502

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + M   GV+ D  SY  LI+ YC  G+ + A  + D M   G    + T+  L+ G C A
Sbjct: 503 DLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA----INVFESMEVKDSFTY 391
             I  A      M + G    +  YN I+  L +  +   A    +N+  S    D +TY
Sbjct: 563 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 622

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           + +++ LCK+  +  A K+  S    G+++       ++  L   G + +A  + + I
Sbjct: 623 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680



 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 199/437 (45%), Gaps = 4/437 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R  +A       IR G+ P V TY +LI  Y    +    ++ L+ M E G+SPD
Sbjct: 314 LCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD 373

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
              +N   +   +  ++  ++D+ ++M + G+ P+V +Y +L+  L +LG+ D+A   F 
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            MI   +TP    FN ++ GLC     + A  +   +   G  P  V +N LI  LC  G
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R+   R ++  +   G  P+A +YT ++       +     ++   M   G +     Y 
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++  +    R+ +A     +M+  GV   +V+YNT+++   +  +   A  L   M   
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
           G +CD YT+ I+++GLCK+  +  A    + +   G   N+  +  ++  L K G+ + A
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 673

Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +++F ++     V +  TY  +  NL +   L     L  +  K+G         A+V  
Sbjct: 674 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 733

Query: 433 LRHSGCRREAKKIQSKI 449
           L H G    A    SK+
Sbjct: 734 LLHRGDISRAGAYLSKL 750



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 174/369 (47%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI    + K   ++KA  I     + G+ P+VV Y  LIDA C+    D      N+
Sbjct: 375 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 434

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G++P++V +NSL+ G         + +L+ EML+ GI P+   +N+L+  L  +G+
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E  R+   M    + P   ++  +++G C    TD A ++F G+   G  P  VTYN 
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+ G C A R+  A  + +E+   G  P  +TY TI+   F+ +++    E+   M   G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + Y  ++    K   + EA    + + + G+QL+I+++  +I    K G+ E A 
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            L   +   G   +  T+ ++ + L + G+++        M K G   N +  N +V RL
Sbjct: 675 DLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734

Query: 368 GKDGKIDHA 376
              G I  A
Sbjct: 735 LHRGDISRA 743



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 178/391 (45%), Gaps = 10/391 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
           V P++ TY++LI  +C+    + G+     + + G   D +  N L+ G      +  ++
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 98  D-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD----LTPCTATFNI 152
           D LL  M E+G  PD  SY  L+  L    + +EA  +   M+  D      P   +++I
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLH-MMADDHGRRCPPNVVSYSI 204

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           ++NG       D    +F  +   G  P++VTY  +I GLCKA     A  + +++ D+G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN  TY  ++       K+K  +++L  M  +G   D + Y +++    K GR +EA 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
            + + M+  G++  + +Y  LI+ Y  +G L   +  LD M + G   D +   I     
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDS 388
            K G I  A      M + G   N+  Y  ++D L K G++D A   F  M       + 
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             ++S+V+ LC   +   A +L+   L  G+
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 203/443 (45%), Gaps = 8/443 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSF-DAGYTILNRMR 69
           +I +  FC+   LE   A     ++ G   D +  N L+   C      +A   +L RM 
Sbjct: 94  SILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMP 153

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLG 126
           E G  PD V+Y  L+ G         +L+LL  M +      PP+V SY+ +++  F  G
Sbjct: 154 ELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEG 213

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           + D+   +F +MI   + P   T+  +++GLCK +  D A  +F+ +  +GF P   TYN
Sbjct: 214 QVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYN 273

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G    G+ +    +L+E+   G  P+  TY +++    +N + +       +M RK
Sbjct: 274 CLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRK 333

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G       Y  +I  +   G L E   +++ MV +G+  D   +N   + Y K G ++ A
Sbjct: 334 GIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKA 393

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             + ++M + G   +   +  LID LCK G +  A +    M   G   N+  +N +V  
Sbjct: 394 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYG 453

Query: 367 LGKDGKIDHAIN-VFESME---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
           L    K + A   V+E ++     ++  +++++ NLC   R+    +L+      GVR  
Sbjct: 454 LCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPD 513

Query: 423 KSAQKAVVDGLRHSGCRREAKKI 445
             +   ++ G   +G   EA+K+
Sbjct: 514 AFSYTPLISGYCLTGRTDEAEKV 536



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 173/380 (45%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK  R++ AE      I  GV P++V +N L+   C    ++    ++  M + GI P
Sbjct: 418 ALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP 477

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + V +N+LI        +     L+D M  +G+ PD +SY  L+      G+ DEA +VF
Sbjct: 478 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVF 537

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
             M+   L+P   T+N +L+G C     D+A  +FR + + G  P +VTYN ++ GL + 
Sbjct: 538 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 597

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A+ +   + +SG   +  TY  I+    ++       ++  ++  KG   +   +
Sbjct: 598 KRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 657

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I A +K GR ++A D    +  +G+  ++V+Y  +     +EG LE    L   MEK
Sbjct: 658 TIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 717

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G   +      L+  L   G+I  A  +L  +++  F       + ++     D    H
Sbjct: 718 NGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHH 777

Query: 376 AINVFESMEVKDSFTYSSMV 395
           A ++ E     +    S+++
Sbjct: 778 AKSLPEKYHFLNEANSSALI 797



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 52/199 (26%)

Query: 271 ATDYMEQMV---TDGVQLDIVSYNTLINLYCKEGKLEAAY-------------------- 307
           A  +  +MV   +D V  ++ +Y+ LI  +C+ G LE  +                    
Sbjct: 71  AVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQ 130

Query: 308 ----------------LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
                           +LL  M + G   D  ++TIL+ GLC   N K A   LE ++ +
Sbjct: 131 LLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLC---NEKRAEEALELLHMM 187

Query: 352 GFD------SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 401
             D       N+ +Y+ +++    +G++D   N+F  M  +    D  TY++++  LCKA
Sbjct: 188 ADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKA 247

Query: 402 KRLPSASKLLLSCLKSGVR 420
           +    A  +    + +G +
Sbjct: 248 QLFDRAEGVFQQMIDNGFK 266


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 180/370 (48%), Gaps = 4/370 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+L D V Y  LI+  C+       + +L  M    + P++V YN +I    ++ L   +
Sbjct: 184 GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKA 243

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            DL  ++++MGI PD+ +Y SL+    + G+  E  ++  +M+  ++ P   TFN++++ 
Sbjct: 244 RDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDA 303

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            C+      A  MF  + K G  P++VT+N LI G C  G +  AR +   + + G  P+
Sbjct: 304 FCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPD 363

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             +YT ++    + ++    + + + M+ K    D   Y ++I    K GR+  A +   
Sbjct: 364 VWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFS 423

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +  DG   ++++YN LI+ +CK   ++    L   M  +G      T+ ILI+G CK+ 
Sbjct: 424 TINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSK 483

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I+ A   L  M       +   YN + D L K G+I  A  +F+ M V     D  TY+
Sbjct: 484 RIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYN 543

Query: 393 SMVHNLCKAK 402
            ++   CKA+
Sbjct: 544 VLLDAFCKAQ 553



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 173/337 (51%), Gaps = 4/337 (1%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + N+ + +FCK     KA  + +  + +G+ PD++TY  LI  +C+   +     
Sbjct: 221 KPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQ 280

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HC 121
           ++  M    I+P+V T+N LI    R   +  +  + + M++ G  PD+ ++N+L+  HC
Sbjct: 281 LMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHC 340

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L   G   EA ++F  +    + P   ++ I++ G CK +  D A+ +F  ++    V +
Sbjct: 341 LH--GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLD 398

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +V Y+ LI GLCK+GR+  A  +   + + G  PN ITY  ++    + +   +G+E+  
Sbjct: 399 IVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFK 458

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M  KG T     Y  +I  + K  R++EA + +  M +  +  D ++YN+L +  CK G
Sbjct: 459 LMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG 518

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           ++  A+ L   M   G   D  T+ +L+D  CKA ++
Sbjct: 519 RISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 198/424 (46%), Gaps = 10/424 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV P + T ++ I+ YC        +++L  + + G  P+ +T  +++ G   N  +  +
Sbjct: 114 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 173

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +D  D +   G+  D   Y +L++ L ++G+  +A ++ Q+M    + P    +N++++ 
Sbjct: 174 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDS 233

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK+  T  A  ++  +   G  P+++TY  LI+G C+ G+    + ++ E+ +    PN
Sbjct: 234 FCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPN 293

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T+  ++    R  K      + + M ++G   D   + T+I+     G + EA    +
Sbjct: 294 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFD 353

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            +   G+  D+ SY  LI  YCK  +++ A  L +EM  +    D   ++ LIDGLCK+G
Sbjct: 354 TVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSG 413

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
            I  A      +N  G   N+  YN ++D   K   ID  I +F+ M  K       TY+
Sbjct: 414 RISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYN 473

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
            +++  CK+KR+  A  LL       +        ++ DGL  SG      +I     + 
Sbjct: 474 ILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG------RISDAWELF 527

Query: 453 KISH 456
           K+ H
Sbjct: 528 KVMH 531



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 166/362 (45%), Gaps = 4/362 (1%)

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
            F   D   T+ N +      P V+ +N++I    +      ++ LL +M+  G+ P ++
Sbjct: 61  SFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIF 120

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           + +  ++C   LG+   A  V   ++     P   T   ++ GLC N     A+     +
Sbjct: 121 TLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNV 180

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G + + V Y  LI GLCK GR   A  +L+E+      PN + Y  I+    ++   
Sbjct: 181 AAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELT 240

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
               ++   +   G   D   Y ++I  F + G+  E    M +MV   +  ++ ++N L
Sbjct: 241 CKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVL 300

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+ +C++GK+  A  + + M K+G + D  T   LI G C  GN+  AR   + + + G 
Sbjct: 301 IDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGI 360

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASK 409
             ++ +Y  ++    K  +ID A+++F  M  K    D   YSS++  LCK+ R+  A +
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE 420

Query: 410 LL 411
           L 
Sbjct: 421 LF 422



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 10/329 (3%)

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           D+A  +F  +I     P    FN ++  + K ++   A+ + + +   G  P + T +I 
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           I   C  G +  A  +L  +   G+ PN IT TT+MK    N + +  ++    +  +G 
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y T+I    KIGR  +A   +++M    V+ +IV YN +I+ +CK+     A  
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR-LHLEYMNKIGFDSNLEAYNCIVDRL 367
           L  ++   G + D  T+T LI G C+ G     + L  E +NK   + N+  +N ++D  
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK-NINPNVYTFNVLIDAF 304

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            + GK+  A  +F  M    +  D  T+++++   C    +  A KL  +  + G  IL 
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG--ILP 362

Query: 424 SAQKAVVDGLRHSGCRR--EAKKIQSKIR 450
                 +  + +  C+R  EA  + +++R
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMR 391


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 210/491 (42%), Gaps = 73/491 (14%)

Query: 1   MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
           +FG+L    L   VC+       F K   ++KA  +    I   V PDVVTYN LID  C
Sbjct: 51  VFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLC 110

Query: 54  QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
           +         +L +M +AGI P+  TYNSLI G +   +   S+ +  EM   G+ P V 
Sbjct: 111 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 170

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTP----------------CTAT-------- 149
           + NS +H L +  +  EA  +F  M+     P                C A         
Sbjct: 171 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 230

Query: 150 -----------FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
                      FNI++N   +    D A+ +F  +Q  G +P+ VT+  +I  LC+ GRL
Sbjct: 231 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 290

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY-CT 257
             A      + D G  P+   Y  +++ C  + +     E++S M  K     G  Y  +
Sbjct: 291 DDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 350

Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA--YLLL----- 310
           +I    K GR+ E  D M+ MV  G + ++V++N+L+  YC  G +E A  YL+L     
Sbjct: 351 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLA 410

Query: 311 -------------------DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
                               EM + G      T+ +++ GLC+      A + LE +  +
Sbjct: 411 LNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 470

Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
               ++  +N ++  + K G+   A  +F ++     V    TY+ M+ NL K +    A
Sbjct: 471 NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEA 530

Query: 408 SKLLLSCLKSG 418
             L +S  KSG
Sbjct: 531 DNLFISVEKSG 541



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 198/431 (45%), Gaps = 14/431 (3%)

Query: 24  EKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
           E A A+    +R G+ PDV +YN LID + +    D  Y +  +M E  +SPDVVTYNSL
Sbjct: 46  ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105

Query: 84  IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
           I G  +   +  S  +L++M++ GI P+  +YNSL++     G   E+ RVF++M    L
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
            PC    N  ++ LC++     A  +F  +   G  P +++Y+ L+ G    G       
Sbjct: 166 IPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNS 225

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           ++  +   G  PN   +  ++    R       + I   M+ KG   D   + TVI++  
Sbjct: 226 LVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 285

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD-- 321
           +IGRL +A      MV  GV      Y  LI   C  G+L  A  L+ EM  +       
Sbjct: 286 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 345

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN--- 378
           KY  +I I+ L K G +   +  ++ M + G   N+  +N +++     G ++ A++   
Sbjct: 346 KYFSSI-INNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLM 404

Query: 379 VFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
           ++  + +    TY         A+R  +A K+    ++SG  +       V+ GL  + C
Sbjct: 405 LWHQLALNRIVTY--------MARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNC 456

Query: 439 RREAKKIQSKI 449
             EA  +  K+
Sbjct: 457 TDEANMLLEKL 467



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 143/333 (42%), Gaps = 40/333 (12%)

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
           P+ A  VF  ++   L P   ++N +++G  K    D A  +F  + +    P++VTYN 
Sbjct: 45  PELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNS 104

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LI GLCK   +  +  +L+++ D+G  PN  TY +++        +K  + +   M   G
Sbjct: 105 LIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 164

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT--------------- 292
                    + I A  +  R+KEA D  + MV  G + +I+SY+T               
Sbjct: 165 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMN 224

Query: 293 --------------------LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                               LIN Y + G ++ A L+ ++M+ +G   D  T   +I  L
Sbjct: 225 SLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 284

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-- 390
           C+ G +  A     +M  IG   +   Y C++      G++  A  +   M  KD     
Sbjct: 285 CRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPG 344

Query: 391 ---YSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
              +SS+++NL K  R+     ++   +++G R
Sbjct: 345 VKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR 377



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 155/347 (44%), Gaps = 16/347 (4%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  NI +  + +   ++KA  I  D    G++PD VT+  +I + C+    D      N 
Sbjct: 240 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 299

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-VWSYNSLMHCLFQLG 126
           M + G+ P    Y  LI G   +  L  + +L+ EM+   IPP  V  ++S+++ LF+ G
Sbjct: 300 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 359

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  E   +   M+     P   TFN ++ G C     + AL  +  L     +  +VTY 
Sbjct: 360 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALH-YLMLWHQLALNRIVTY- 417

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR---KYKLGLEILSAM 243
                   A R   A+ +  E+ +SG   +  TY  ++    RN    +  + LE L AM
Sbjct: 418 -------MARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 470

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K   FD   +  VI+A +K+GR +EA +    + T G+   + +YN +I+   KE   
Sbjct: 471 NVK---FDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 527

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
           E A  L   +EK G   D      ++  L K   +  A  +L  +++
Sbjct: 528 EEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDE 574


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 169/359 (47%), Gaps = 4/359 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L+N C    CK   + +A  +  +   LG+ P+ VTY  L+  Y      + G+ +  
Sbjct: 42  TALVNGC----CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G+ P++ TYN LI    R      +  L DEM   GI  +V SYN+L+  L + G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +A ++   M      P   TFN++++G  K     NAL  F  ++  GF P  VTYN
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +LI G C+A  +  A   L ++ + G  P  +TYT ++    R        EIL+ M++ 
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  ++ A    G +K+A    + M   GV+   V Y+ +I  Y +EG    A
Sbjct: 278 GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKA 337

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
             L+ EM ++G   +  ++ + I  LCK    + A   L+ M + G  ++      ++D
Sbjct: 338 LKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLD 396



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 177/360 (49%), Gaps = 4/360 (1%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV    +L+ G  +   ++ +  + DEM  +G+ P+  +Y +LMH  F  G+ ++   +F
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M  G + P   T+N ++   C+    + A  +F  +   G V  +V+YN LI GLC+ 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A  +L  +   G  P+ IT+  ++    +  K    L   + MK  G+      Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +IA F +   +  A   +  M   G++   V+Y  LI+ + +E  +  A+ +L  MEK
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G E D +T+ +L+  LC  GN+K AR   + M + G + +   Y+ ++   G++G    
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK 336

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           A+ +   M  K    +S +Y   +  LCK  +   A  LL   +++G++  +S  +A++D
Sbjct: 337 ALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLD 396



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 178/388 (45%), Gaps = 3/388 (0%)

Query: 17  FCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
            C A  +  A A++  G + G    DV     L++  C+         + + M   G++P
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           + VTY +L+ G   +        L +EM   G+ P++++YN L+    + G+ + A  +F
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M    +     ++N ++ GLC++    +A ++   ++  G  P ++T+N+L+ G  KA
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G++  A     ++  +G  P+A+TY  ++    R R        LS MK +G       Y
Sbjct: 192 GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY 251

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +I +F +   + +A + +  M   G+++D  +Y  L+   C EG ++ A  L   M +
Sbjct: 252 TILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE 311

Query: 316 QGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
           +G E     + ++I G  + G + K  +L +E M + G   N  +Y   +  L KD K  
Sbjct: 312 KGVEPSNVIYDMMIYGYGREGSSYKALKLIME-MRQKGLIPNSASYGLTIRVLCKDDKCQ 370

Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAK 402
            A  + + M      T  S+   L  AK
Sbjct: 371 EAEALLDDMVRAGLQTSESICQALLDAK 398



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 8/313 (2%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           D+T CTA    ++NG CK      A R+F  +   G  P  VTY  L+ G    G+    
Sbjct: 37  DVTACTA----LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKG 92

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             + +E+   G  PN  TY  ++    R  +++    +   M  +G   +   Y T+IA 
Sbjct: 93  FALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             + G+L +A   ++ M T+G +  I+++N L++ Y K GK+  A    ++M+  GF+  
Sbjct: 153 LCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+ +LI G C+A ++  A   L  M + G +     Y  ++D   ++  +  A  +  
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            ME      D+ TY  +V  LC    +  A KL  S  + GV         ++ G    G
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREG 332

Query: 438 CRREAKKIQSKIR 450
              +A K+  ++R
Sbjct: 333 SSYKALKLIMEMR 345



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 40/280 (14%)

Query: 157 LCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           LC      +AL M  RG +      ++     L+ G CK G +  AR +  E+   G AP
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TYT +M   F + + + G  +   M+R                              
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRR------------------------------ 101

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                 GV+ ++ +YN LI  +C+ G+ E A  L DEM  +G   +  ++  LI GLC+ 
Sbjct: 102 -----GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G +  A   L+ M   G   ++  +N +VD  GK GK+ +A+  F  M+       + TY
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           + ++   C+A+ +  A++ L    + G+   K     ++D
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILID 256



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 4/157 (2%)

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
           LD+ +   L+N  CK G +  A  + DEM   G   ++ T+T L+ G    G  +     
Sbjct: 36  LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFAL 95

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            E M + G + NL  YNC++    + G+ + A ++F+ M V+    +  +Y++++  LC+
Sbjct: 96  FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             +L  A+KLL      G R        +VDG   +G
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
            I + +F + N + KA  I+    + G+  D  TY +L+ A C   +      +   M E
Sbjct: 252 TILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE 311

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P  V Y+ +I G  R      +L L+ EM + G+ P+  SY   +  L +  K  E
Sbjct: 312 KGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQE 371

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
           A  +  DM+   L    +    +L+   + R + N
Sbjct: 372 AEALLDDMVRAGLQTSESICQALLDAKARLRGSAN 406


>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
          Length = 1295

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 201/411 (48%), Gaps = 7/411 (1%)

Query: 8    RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC--QFVSFDAGYTIL 65
            RL N  +    + N++  A ++  D    G  P+V +Y++L+  Y   +    +  + +L
Sbjct: 831  RLCNFLLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELL 890

Query: 66   NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
              M   G+ P+  TY + + G  R+  ++ + D L  + + G P   + +N+++H     
Sbjct: 891  CEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCE 950

Query: 126  GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            G+ D+A  VF  M      P   +++I+++GLCK         M   + ++G  P  V+Y
Sbjct: 951  GQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSY 1010

Query: 186  NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            + L+ GLCK G++  A  I K L D G   + I Y+ I+  C ++   K   ++   M  
Sbjct: 1011 SSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDMIH 1070

Query: 246  KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
                 D + Y ++I A  +   L++A    E M+ +G+  +IV+   L++ + K+G +  
Sbjct: 1071 HNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGE 1130

Query: 306  AYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+L LD M +  G   +   + ++I+GLCK     G       M K G+  ++  Y+ I+
Sbjct: 1131 AFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIII 1190

Query: 365  DRLGKDGKIDHAINVFESM---EVKDS-FTYSSMVHNLCKAKRLPSASKLL 411
            +   K  K+  A+ ++  M    VK + FTYSS+++ LC   RLP A  L+
Sbjct: 1191 EGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMGLI 1241



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 202/425 (47%), Gaps = 11/425 (2%)

Query: 17   FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            F +++  E A    I    +GV  D    N L+    +        ++ + M+  G SP+
Sbjct: 807  FVESSMFEDALLTYIQAKNIGV--DRRLCNFLLKCLVEGNQIMYARSLFDDMKSCGPSPN 864

Query: 77   VVTYNSLIAGATRN--SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
            V +Y+ L++  T    S L  + +LL EM   G+ P+  +Y + ++ L +  +   A   
Sbjct: 865  VCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDF 924

Query: 135  FQDMICGDLTPCTA-TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
             Q  +     PC+   FN +++G C     D A+ +F G++K G+VP++ +Y+IL+ GLC
Sbjct: 925  LQ-TLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLC 983

Query: 194  KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
            K G L     +L+E+  +G  PN ++Y++++    +  +  L L+I   ++  G+  D  
Sbjct: 984  KQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQI 1043

Query: 254  GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
             Y  ++    +   LK  +D    M+   +  D+ +Y +LI   C+   L+ A  + + M
Sbjct: 1044 NYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELM 1103

Query: 314  EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK-IGFDSNLEAYNCIVDRLGKDGK 372
             + G   +  T TIL+D   K G +  A L L+ M++ +G   NL  Y  +++ L K  K
Sbjct: 1104 LENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNK 1163

Query: 373  IDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
                 NVF  M     V D   YS ++    KA +L  A +L    L  GV+       +
Sbjct: 1164 YSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSS 1223

Query: 429  VVDGL 433
            +++GL
Sbjct: 1224 LINGL 1228



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 1/340 (0%)

Query: 3    GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
            G  S    N  +  FC   +++KA  +     + G +PDV +Y++L+D  C+      GY
Sbjct: 933  GPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGY 992

Query: 63   TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
             +L  M   GI P+ V+Y+SL+ G  +   ++ +L +   + + G   D  +Y+ ++H  
Sbjct: 993  DMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGC 1052

Query: 123  FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
             Q       + ++ DMI  ++ P    +  ++  LC++R   +AL +F  + ++G  P +
Sbjct: 1053 CQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNI 1112

Query: 183  VTYNILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
            VT  IL+    K G +  A   L  +  S G  PN   Y  ++    +  KY     + +
Sbjct: 1113 VTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFA 1172

Query: 242  AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
             M ++GY  D   Y  +I  FVK  +L+EA     +M+ +GV+ +I +Y++LIN  C + 
Sbjct: 1173 DMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDD 1232

Query: 302  KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            +L  A  L+ +M  +    D   +T +I   C+  N+K A
Sbjct: 1233 RLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAA 1272



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 6/205 (2%)

Query: 258  VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK--LEAAYLLLDEMEK 315
            ++   V+  ++  A    + M + G   ++ SY+ L+++Y    +  LE A+ LL EME 
Sbjct: 836  LLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMES 895

Query: 316  QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
             G   +  T+   + GLC++  +  A   L+ +++ G   +   +N ++     +G++D 
Sbjct: 896  NGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDK 955

Query: 376  AINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
            AI VF  M+    V D  +YS +V  LCK   L     +L    ++G+   + +  +++ 
Sbjct: 956  AIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLH 1015

Query: 432  GLRHSGCRREAKKIQSKIRMAKISH 456
            GL  +G    A KI   ++     H
Sbjct: 1016 GLCKTGQVALALKIFKNLQDHGFEH 1040


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 153/287 (53%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 142 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAML 201

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P   TF  +++G CKN   D
Sbjct: 202 ASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 261

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +     +P+L+TYN LI GLCK G L+ A  ++ E+   G  P+  TYTT++
Sbjct: 262 FAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 321

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C +        E    M ++    D   Y  +I+   + GR  +A   + +M++ G++
Sbjct: 322 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 382 PDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 160/309 (51%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 120 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 179

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 180 LMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 239

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            +P  VT+  LI G CK GR+  A  I K +      P+ ITY T++    +    K   
Sbjct: 240 LIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 299

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           +++  M  KG   D F Y T+I    K G L  A ++ ++M+ + ++LD V+Y  LI+  
Sbjct: 300 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGL 359

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 360 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL-LKEMQRNGHAPS 418

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 419 VVTYNVLMN 427



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 137/284 (48%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 128 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 187

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
            + D   R+   +   G +P++ TY++LI GLCK  ++  A  +  E+   G  PN +T+
Sbjct: 188 GHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 247

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +    +EI   M  +    D   Y T+I    K G LK+A D +++M  
Sbjct: 248 TTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 307

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D  +Y TLI+  CKEG L+ A+     M ++    D   +  LI GLC+ G    
Sbjct: 308 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVD 367

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
           A   L  M  +G   +   Y  I++   K G +     + + M+
Sbjct: 368 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 411



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 114/214 (53%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK ++++ A  +  + +  G++P+ VT+  LID +C+    D    I  RM  
Sbjct: 213 SVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLS 272

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             + PD++TYN+LI G  +   L  + DL+DEM   G+ PD ++Y +L+    + G  D 
Sbjct: 273 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDT 332

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A    + MI  ++      +  +++GLC+   + +A +M R +   G  P+  TY ++I 
Sbjct: 333 AFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIIN 392

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
             CK G +     +LKE+  +GHAP+ +TY  +M
Sbjct: 393 EFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 426



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 110 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 169

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 170 LRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDAN 229

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +   M  Q    D  T+  LI GL
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   K+G +D A    + M  +    D 
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDD 349

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L  G++
Sbjct: 350 VAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 91/174 (52%)

Query: 18  CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
           CK  R++ A  I    +   +LPD++TYN LI   C+       + +++ M   G+ PD 
Sbjct: 255 CKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 314

Query: 78  VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
            TY +LI G  +   L  + +    M++  I  D  +Y +L+  L Q G+  +A ++ ++
Sbjct: 315 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLRE 374

Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
           M+   L P T T+ +++N  CK        ++ + +Q++G  P +VTYN+L+ G
Sbjct: 375 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +   CK   L++A  +I +    G+ PD  TY  LID  C+    D  +    RM +
Sbjct: 283 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 342

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D V Y +LI+G  +      +  +L EML +G+ PD  +Y  +++   + G   +
Sbjct: 343 ENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWK 402

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNG 156
            +++ ++M      P   T+N+++NG
Sbjct: 403 GSKLLKEMQRNGHAPSVVTYNVLMNG 428


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 6/339 (1%)

Query: 10  LNICVCTFCKA------NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           LNI V  FC        +++++      D I  G   + V+Y  LID  C+     A   
Sbjct: 46  LNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQ 105

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L  +    + P+VV Y+++I    ++ L+  + DL  +ML   I PDV +YN+LM+   
Sbjct: 106 VLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCL 165

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
            +G+  EA  +F  M+  ++ P   TFNI+++GLCK      A  +   + K    P+++
Sbjct: 166 IVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVI 225

Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
           TYN L+ G     +   A ++   +   G  P+  +Y+ ++    + +     + +L  M
Sbjct: 226 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEM 285

Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
             K    +   Y ++I    K GR+ +A D + +M   G   D+++YN+L++  CK  ++
Sbjct: 286 HSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQV 345

Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           + A  LL +++ QG + D YT+TIL+DGLCK G +K A+
Sbjct: 346 DKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQ 384



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 14/293 (4%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           PDV+TYN L+              + N+M    I PD+ T+N L+ G  +   +  + ++
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNV 211

Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
           L  M++  + PDV +YNSLM   F + + ++A  VF  M    +TP   ++++M+NGLCK
Sbjct: 212 LAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCK 271

Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
            +  D A+ + + +      P  VTY+ LI GL K+GR+  A  ++ E+ + G   + IT
Sbjct: 272 TKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVIT 331

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y +++    +N +    + +L+ +K +G   D + Y  ++    K GRLK+A +  + ++
Sbjct: 332 YNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILL 391

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
             G  LD +               + A  LL +ME  G   +  T  ILI  L
Sbjct: 392 IKGYHLDSL--------------FDKALSLLSKMEDNGCTPNPVTFEILIRAL 430



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 161/307 (52%), Gaps = 4/307 (1%)

Query: 17  FCKANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
            CKA     A  ++  IDG  L V P+VV Y+ +I + C+       + + ++M    IS
Sbjct: 94  LCKAGETRAAMQVLRNIDG--LLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRIS 151

Query: 75  PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
           PDV+TYN+L+ G      L  ++ L ++ML   I PD++++N L+  L + G+  +A  V
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNV 211

Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
              MI   + P   T+N +++G    +  + A  +F  + + G  P++ +Y+++I GLCK
Sbjct: 212 LAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCK 271

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
              +  A  +LKE+     APN +TY++++    ++ +     ++++ M  +G   D   
Sbjct: 272 TKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVIT 331

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y +++ A  K  ++ +A   + ++   G+Q DI +Y  L++  CK G+L+ A  +   + 
Sbjct: 332 YNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILL 391

Query: 315 KQGFECD 321
            +G+  D
Sbjct: 392 IKGYHLD 398



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 21/259 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI V   CK   ++KA  ++   I+  V PDV+TYN L+D Y      +    + N M 
Sbjct: 192 FNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMA 251

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G++PDV +Y+ +I G  +  ++  +++LL EM    + P+  +Y+SL+  L + G+  
Sbjct: 252 RRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIF 311

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           +A  +  +M          T+N +L+ LCKN   D A+ +   ++  G  P++ TY IL+
Sbjct: 312 DAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILV 371

Query: 190 KGLCKAGRLRTARWI---------------------LKELGDSGHAPNAITYTTIMKCCF 228
            GLCK GRL+ A+ +                     L ++ D+G  PN +T+  +++  F
Sbjct: 372 DGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALF 431

Query: 229 RNRKYKLGLEILSAMKRKG 247
            N      +E+L  M  +G
Sbjct: 432 ENDMNDKAVELLREMIARG 450



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 178/382 (46%), Gaps = 10/382 (2%)

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG------K 127
           +P +  +  + A   + +     + L  +M   GI  D+ + N L++C   LG      K
Sbjct: 5   TPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDK 64

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             E      D+I         ++  +++GLCK   T  A+++ R +      P +V Y+ 
Sbjct: 65  VKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYST 124

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I  LCK   +  A  +  ++     +P+ ITY T+M  C    + K  + + + M  K 
Sbjct: 125 IIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN 184

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
              D + +  ++    K G +K+A + +  M+   V  D+++YN+L++ Y    +   A 
Sbjct: 185 IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKAT 244

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
            + + M ++G   D ++++++I+GLCK   +  A   L+ M+      N   Y+ ++D L
Sbjct: 245 FVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGL 304

Query: 368 GKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
            K G+I  A ++   M    +  D  TY+S++  LCK  ++  A  LL      G++   
Sbjct: 305 HKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364

Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
                +VDGL  +G  ++A+++
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEV 386



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 193/423 (45%), Gaps = 12/423 (2%)

Query: 40  PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI------AGATRNSLL 93
           P +  +  +  +  +   F    ++ ++M   GI  D+V  N L+           N  +
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 94  SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
             +L   D+++  G   +  SY +L+  L + G+   A +V +++    + P    ++ +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +  LCK++   +A  ++  +      P+++TYN L+ G    GRL+ A  +  ++     
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            P+  T+  ++    +  + K    +L+ M ++    D   Y +++  +  + +  +AT 
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M   GV  D+ SY+ +IN  CK   ++ A  LL EM  +    +  T++ LIDGL 
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           K+G I  A   +  M+  G  +++  YN ++D L K+ ++D AI +   ++ +    D +
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA--VVDGLRHSGCRREAKKIQS 447
           TY+ +V  LCK  RL  A ++    L  G  +     KA  ++  +  +GC       + 
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEI 425

Query: 448 KIR 450
            IR
Sbjct: 426 LIR 428



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 21/113 (18%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC--------QFVS----------- 57
            CK ++++KA  ++      G+ PD+ TY +L+D  C        Q V            
Sbjct: 339 LCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLD 398

Query: 58  --FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGI 108
             FD   ++L++M + G +P+ VT+  LI     N +   +++LL EM+  G+
Sbjct: 399 SLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 180/376 (47%), Gaps = 14/376 (3%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
            + NI    + K   ++KA  I     + G+ PD V+Y  LIDA C+    D      N+
Sbjct: 31  HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 90

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLD-------LLDEMLEMGIPPDVWSYNSLMH 120
           M   G++P++V ++SL+ G        CS+D       L  EML +GI P++  +N+++ 
Sbjct: 91  MINEGVTPNIVVFSSLVYGL-------CSIDKWEKVEELFFEMLNVGIHPNIVFFNTILC 143

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L + G+  E  R+   + C  + P   ++N +++G C     D A ++  G+   G  P
Sbjct: 144 NLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKP 203

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
              +YN L+ G CKAGR+ +A  + +++  +G  P  +TY TI+   F+ +++    E+ 
Sbjct: 204 NSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELY 263

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
             M   G  +  + Y T++    K   + EA    + + + G+QL+I+++  +I    K 
Sbjct: 264 LNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 323

Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
           G+ E A  L   +   G   D  T+ ++ + L + G+++        M K G   N +  
Sbjct: 324 GRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQML 383

Query: 361 NCIVDRLGKDGKIDHA 376
           N +V RL   G I  A
Sbjct: 384 NALVRRLLHRGDISRA 399



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 171/363 (47%), Gaps = 4/363 (1%)

Query: 16  TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
             CK  R++ AE      I  GV P++V ++ L+   C    ++    +   M   GI P
Sbjct: 74  ALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHP 133

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANR 133
           ++V +N+++    +   +     L+D +  MG+ PDV SYN+L+  HCL   G  DEA++
Sbjct: 134 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL--AGTIDEASK 191

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + + M+   L P + ++N +L+G CK    D+A  +FR +  +G  P +VTYN ++ GL 
Sbjct: 192 LLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLF 251

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
           +  R   A+ +   + +SG      TY TI+    ++       ++  ++  KG   +  
Sbjct: 252 QTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 311

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
            +  +I A +K GR ++A D    +  +G+  D+V+Y  +     +EG LE    L   M
Sbjct: 312 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAM 371

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           EK G   +      L+  L   G+I  A  +L  +++  F       + ++     D   
Sbjct: 372 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQ 431

Query: 374 DHA 376
            HA
Sbjct: 432 HHA 434



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 182/392 (46%), Gaps = 4/392 (1%)

Query: 62  YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
           + +LN M   GISP+   +N   +   +  ++  ++D+ ++M + G+ PD  SY +L+  
Sbjct: 15  HDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDA 74

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
           L +LG+ D+A   F  MI   +TP    F+ ++ GLC     +    +F  +   G  P 
Sbjct: 75  LCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPN 134

Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
           +V +N ++  LCK GR+   + ++  +   G  P+ I+Y T++             ++L 
Sbjct: 135 IVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 194

Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
            M   G   + F Y T++  + K GR+  A     +M+++G+   +V+YNT+++   +  
Sbjct: 195 GMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTK 254

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           +   A  L   M   G +   YT+  +++GLCK+  +  A    + +   G   N+  + 
Sbjct: 255 RFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 314

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
            ++  L K G+ + A+++F ++     V D  TY  +  NL +   L     L  +  K+
Sbjct: 315 IMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKN 374

Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           G         A+V  L H G    A    SK+
Sbjct: 375 GTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 406



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 144/293 (49%), Gaps = 2/293 (0%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
             N  +C  CK  R+ + + ++ D I  +GV PDV++YN LID +C   + D    +L  
Sbjct: 137 FFNTILCNLCKEGRVMEGQRLV-DSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 195

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M   G+ P+  +YN+L+ G  +   +  +  L  +ML  GI P V +YN+++H LFQ  +
Sbjct: 196 MVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKR 255

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
             EA  ++ +MI         T+N +LNGLCK+   D A +MF+ L   G    ++T+ I
Sbjct: 256 FSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 315

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           +I  L K GR   A  +   +  +G  P+ +TY  + +        +    + SAM++ G
Sbjct: 316 MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNG 375

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
              +      ++   +  G +  A  Y+ ++      ++  + + LI+++  +
Sbjct: 376 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSD 428


>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor
 gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
 gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 11/383 (2%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           D  +++  I  A R  L      L+  M  + I P   ++  +       GKPD+A ++F
Sbjct: 90  DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
            +M         A+FN +L+ LCK++  + A  +FR L+   F  + VTYN+++ G C  
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
            R   A  +LKE+ + G  PN  TY T++K  FR  + +   E    MK++    D   Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
            TV+  F   G +K A +  ++M+ +GV   + +YN +I + CK+  +E A ++ +EM +
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
           +G+E +  T+ +LI GL  AG        ++ M   G + N + YN ++    +  +++ 
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388

Query: 376 AINVFESMEVKDSF----TYSSMVHNLCKAKR---LPSASKLLLSCLKSGVRILKSAQKA 428
           A+ +FE M   D      TY+ ++  +   KR   +  A KLLL  ++ G    K     
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNR 448

Query: 429 VVDGLRHSGCRREAKKI---QSK 448
           V++GL  +G +  AK+I   QSK
Sbjct: 449 VLNGLLLTGNQAFAKEILRLQSK 471



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 169/351 (48%), Gaps = 6/351 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S +   I    +  A + +KA  + ++    G   D+ ++N ++D  C+    +  Y + 
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             +R    S D VTYN ++ G         +L++L EM+E GI P++ +YN+++   F+ 
Sbjct: 185 RALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G+   A   F +M   D      T+  +++G         A  +F  + + G +P + TY
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           N +I+ LCK   +  A  + +E+   G+ PN  TY  +++  F   ++  G E++  M+ 
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN-LYCK---EG 301
           +G   +   Y  +I  + +   +++A    E+M +     ++ +YN LI+ ++ +   E 
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
            + A  LLL EM ++GF   K+T   +++GL   GN   A+  L   +K G
Sbjct: 424 MVVAGKLLL-EMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/278 (20%), Positives = 124/278 (44%), Gaps = 3/278 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N+ +  +C   R  KA  ++ + +  G+ P++ TYN ++  + +       +     M++
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
                DVVTY +++ G      +  + ++ DEM+  G+ P V +YN+++  L +    + 
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  +F++M+     P   T+N+++ GL           + + ++  G  P   TYN++I+
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF---RNRKYKLGLEILSAMKRKG 247
              +   +  A  + +++G     PN  TY  ++   F   R+    +  ++L  M  +G
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERG 438

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
           +    F +  V+   +  G    A + +      G +L
Sbjct: 439 FIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRL 476


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            NI +   CK  +L+KA+  +      G+ P +VTYN L+  +      +    I++ M+
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G  PD+ TYN +++        S   ++L EM E+G+ PD  SYN L+      G  +
Sbjct: 288 SKGFQPDMQTYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
            A     +M+   + P   T+N +++GL      + A  + R +++ G V + VTYNILI
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G C+ G  + A  +  E+   G  P   TYT+++    R  K +   E+   +  KG  
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D     T++     IG +  A   +++M    +  D V+YN L+   C EGK E A  L
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
           + EM+++G + D  ++  LI G  K G+ K A +  + M  +GF+  L  YN ++  L K
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584

Query: 370 DGKIDHAINVFESME 384
           + + + A  +   M+
Sbjct: 585 NQEGELAEELLREMK 599



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 203/438 (46%), Gaps = 7/438 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +    + NR+E A     D  R+ +  +V T+N++I+  C+          L 
Sbjct: 190 TETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLG 249

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M   GI P +VTYN+L+ G +    +  +  ++ EM   G  PD+ +YN ++  +   G
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG 309

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +   A+ V ++M    L P + ++NI++ G   N   + A      + K G VP   TYN
Sbjct: 310 R---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GL    ++  A  +++E+ + G   +++TY  ++    ++   K    +   M   
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G     F Y ++I    +  + +EA +  E++V  G++ D+V  NTL++ +C  G ++ A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + LL EM+      D  T+  L+ GLC  G  + AR  +  M + G   +  +YN ++  
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
             K G   HA  V + M          TY++++  L K +    A +LL      G+   
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606

Query: 423 KSAQKAVVDGLRHSGCRR 440
            S+  +V++ + +   ++
Sbjct: 607 DSSFCSVIEAMSNLDAKK 624



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 190/412 (46%), Gaps = 7/412 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
            + +++L+   CQ    D        M+E G  P   T N ++   +R + +  +     
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           +M  M I  +V+++N +++ L + GK  +A      M    + P   T+N ++ G     
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             + A  +   ++  GF P++ TYN ++  +C  GR   A  +L+E+ + G  P++++Y 
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYN 331

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            +++ C  N   ++       M ++G     + Y T+I       +++ A   + ++   
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G+ LD V+YN LIN YC+ G  + A+ L DEM   G +  ++T+T LI  LC+    + A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHN 397
               E +   G   +L   N ++D     G +D A ++ + M++     D  TY+ ++  
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           LC   +   A +L+    + G++    +   ++ G    G  + A  ++ ++
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 166/368 (45%), Gaps = 7/368 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  P   T N ++    +    +  +     M    I  +V T+N +I    +   L  +
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              L  M   GI P + +YN+L+      G+ + A  +  +M      P   T+N +L+ 
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           +C       A  + R +++ G VP+ V+YNILI+G    G L  A     E+   G  P 
Sbjct: 305 MCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             TY T++   F   K +    ++  ++ KG   D   Y  +I  + + G  K+A    +
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+TDG+Q    +Y +LI + C++ K   A  L +++  +G + D      L+DG C  G
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
           N+  A   L+ M+ +  + +   YNC++  L  +GK + A  +   M+ +    D  +Y+
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541

Query: 393 SMVHNLCK 400
           +++    K
Sbjct: 542 TLISGYSK 549


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 155/287 (54%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 145 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P + TF  +++G CKN   D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 264

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +      P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C ++       E    M ++    D   Y  +I+   + G+  +A   + +M++ G++
Sbjct: 325 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLK 384

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 158/309 (51%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNT 182

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG 242

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++     +P+ ITY T++    +    K   
Sbjct: 243 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D   Y T+I    K G L  A ++ ++M+ +  +LD V Y  LI+  
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 362

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG+   A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 363 CREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 421

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 422 VVTYNVLMN 430



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 1/298 (0%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN++T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 250

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +  + D   Y T+I    K G LK+A   +++M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 310

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D ++Y TLI+  CK+G L+ A+     M ++    D   +T LI GLC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVD 370

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 427



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 172

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 232

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 233 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   KDG +D A    + M  +    D 
Sbjct: 293 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDD 352

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  +   A K+L   L  G++
Sbjct: 353 VVYTALISGLCREGQSVDAEKMLREMLSVGLK 384



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 4/300 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F+ ++    ++ +  +A+  +R  ++H F     T   +++ L K    +      +E+ 
Sbjct: 75  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G+  +   +  +M    ++   ++   +  A+ + G       Y T++  ++++G L 
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           E       M+  GVQ D+ +Y+ LIN  CKE K++ A  L DEM  +G   +  T T LI
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLI 254

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CK G +  A    + M       +L  YN ++  L K G +  A ++ + M +K   
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 314

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY++++   CK   L +A +     ++   R+      A++ GL   G   +A+K+
Sbjct: 315 PDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKM 374



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 35/216 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK ++++ A  +  + +  G++P+ VT+  LID +C+    D    I  +M  
Sbjct: 216 SVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM----------- 119
             +SPD++TYN+LI G  +   L  +  L+DEM   G+ PD  +Y +L+           
Sbjct: 276 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDT 335

Query: 120 ------------------------HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                                     L + G+  +A ++ ++M+   L P   T+ +++N
Sbjct: 336 AFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIIN 395

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 396 EFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 208/486 (42%), Gaps = 88/486 (18%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G +   +L+I V TF K   ++KA  +I     LG+  +  T+ +LI  + +    D   
Sbjct: 224 GWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKAL 283

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS-------- 114
            +  +M+++G +PDV  Y++LI G      +  +L LL EM E+GI PD+          
Sbjct: 284 QLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYC 343

Query: 115 -------------------------YNSLMHCLFQLGKPDEANRVFQDMICGDLT----- 144
                                    YNS+++ L      D+A  +   M   + T     
Sbjct: 344 SEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEV 403

Query: 145 -----------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
                      P T +F+I+++GLC     D AL +FR + + G    ++ YN LI  L 
Sbjct: 404 NKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLS 463

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI-------------- 239
            + RL     +LKE+  SG  P   T+ +I  C  R       L++              
Sbjct: 464 NSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIK 523

Query: 240 ---------------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                                L+ M R+G+  D   Y   I  FVKI  + +A +    +
Sbjct: 524 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 583

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   D+V+YNTLIN +CK  ++  A+ +LDEM  +G      T+ +LIDG CK G+I
Sbjct: 584 CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI 643

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A   L  M     + N+  Y  ++D L   G+ D AI+++  M  K    +  ++ ++
Sbjct: 644 DQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIAL 703

Query: 395 VHNLCK 400
           +H LCK
Sbjct: 704 IHGLCK 709



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 163/354 (46%), Gaps = 3/354 (0%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + P   +++ +I G      L  +L L  +M+ +G   +V  YN+L+  L    +
Sbjct: 408 MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 467

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +E   + ++M      P   T N +   LC+      AL M R ++ HG  P +  Y +
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 527

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+K LCK  R   A   L E+   G  P+ + Y+  +    + +     LEI   +  +G
Sbjct: 528 LVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARG 587

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y  D   Y T+I  F K+ R+ EA D +++MV  G+   +V+YN LI+ +CK G ++ A+
Sbjct: 588 YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAF 647

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
             L  M  +  E +  T+T LIDGLC AG    A      M   G   N  ++  ++  L
Sbjct: 648 HCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 707

Query: 368 GKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            K G  D A+  F  M   E  D+  Y +++ +    K    A ++L   +  G
Sbjct: 708 CKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKG 761



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 35/344 (10%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   +I +   C   +L+ A ++  D +R+G   +V+ YN LID        +  Y +L 
Sbjct: 417 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 476

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+ +G  P   T+NS+     R   ++ +LD++ EM   G  P +  Y  L+  L +  
Sbjct: 477 EMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 536

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA     +M+     P    ++  ++G  K +  D AL +FR +   G+ P++V YN
Sbjct: 537 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 596

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK  R+  A  IL E+   G  P+ +TY  ++                      
Sbjct: 597 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID--------------------- 635

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                  G+C       K G + +A   + +MV    + ++++Y TLI+  C  G+ + A
Sbjct: 636 -------GWC-------KNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDA 681

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
             L +EM  +G   ++ +   LI GLCK G    A L+   M +
Sbjct: 682 IHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGE 725



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 1/236 (0%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           + V   CK  R  +A   + + +R G LPD+V Y+  ID + +  + D    I   +   
Sbjct: 527 LLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICAR 586

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G  PDVV YN+LI G  +   +S + D+LDEM+  G+ P V +YN L+    + G  D+A
Sbjct: 587 GYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQA 646

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
                 M+  +  P   T+  +++GLC     D+A+ ++  ++  G  P  +++  LI G
Sbjct: 647 FHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG 706

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           LCK G    A    +E+G+    P+ I Y  ++     N+   L  EIL  M  KG
Sbjct: 707 LCKCGWPDAALLYFREMGER-ETPDTIVYVALITSFISNKNPTLAFEILKEMVAKG 761



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 186/457 (40%), Gaps = 60/457 (13%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD  T   ++ AYC    FD   ++ N +   G   D    + L+   ++   +  +
Sbjct: 189 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTFSKCGEVDKA 247

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L++ M ++GI  +  ++  L+H   +  + D+A ++F+ M      P  + ++ ++ G
Sbjct: 248 FELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGG 307

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC  +  + AL +   +++ G  P++   + LI   C +  +   R I + L D      
Sbjct: 308 LCAKKEIEKALHLLSEMKELGIDPDIQILSKLIP-YC-SEEVDIYRLIEERLEDLDTEAM 365

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF-----------------GYCTVI 259
            + Y +++      +       +L AM    YT D F                  +  VI
Sbjct: 366 LLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYT-DNFEVNKFFMVKEMVRPXTTSFSIVI 424

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
                 G+L  A      MV  G + +++ YN LI+      +LE  YLLL EM+  GF 
Sbjct: 425 DGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFR 484

Query: 320 CDKYTHTILIDGLCKAGNIKGA-------RLH---------------------------- 344
             ++TH  +   LC+  ++ GA       R+H                            
Sbjct: 485 PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNF 544

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L  M + GF  ++ AY+  +D   K   +D A+ +F  +  +    D   Y+++++  CK
Sbjct: 545 LAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCK 604

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            KR+  A  +L   +  G+         ++DG   +G
Sbjct: 605 VKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNG 641



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 128/267 (47%), Gaps = 23/267 (8%)

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
            + K+G +      LKE+ DSG  P+  T T++++    +RK+   L + + +  +G+  
Sbjct: 168 AISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV- 226

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           DG     ++  F K G + +A + +E+M   G++L+  ++  LI+ + ++ +++ A  L 
Sbjct: 227 DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLF 286

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            +M+K GF  D   +  LI GLC    I+ A   L  M ++G D +++  + ++    ++
Sbjct: 287 KKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEE 346

Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLS------------- 413
             I   I   E +E  D+      Y+S+++ L   K +  A  LL +             
Sbjct: 347 VDIYRLIE--ERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVN 404

Query: 414 ---CLKSGVRILKSAQKAVVDGLRHSG 437
               +K  VR   ++   V+DGL ++G
Sbjct: 405 KFFMVKEMVRPXTTSFSIVIDGLCNTG 431


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 4/332 (1%)

Query: 9   LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           + N+ V   CK   + +A  +  D +  G+ PDV TY  LI  +C    +     +L  M
Sbjct: 220 IYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDM 279

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLG 126
            +  ++ +V TYN LI    +  +L  + D+ + M+E G  PD+ ++N+LM  +CL+   
Sbjct: 280 VDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN-- 337

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA ++F       +TP   ++NI++ G CKN   D AL +F  +      P +VTY+
Sbjct: 338 DVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYS 397

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI GLCK+GR+  A  +   + D G +PN ITY  ++    + +     +E+ + M  +
Sbjct: 398 SLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER 457

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G T +   Y  +I  + K  R+ EA +  E+M    +  D V+YN LI+  CK G++  A
Sbjct: 458 GLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
           + L + M   G   D  T+ IL D   K  ++
Sbjct: 518 WELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 39/379 (10%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G L D VTY  LI+  C+       + +L++M    + P+VV YN ++ G  ++ L++ +
Sbjct: 178 GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            DL  +++  GI PDV++Y  L+H    LG+  E  R+  DM+  ++     T+NI+++ 
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LCK      A  M   + + G  P+LVT+N L+ G C    +  AR +     + G  P+
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             +Y  ++                             GYC       K  R+ EA     
Sbjct: 358 VWSYNILI----------------------------IGYC-------KNNRIDEALSLFN 382

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M    +  +IV+Y++LI+  CK G++  A+ L   +   G   +  T+ I++D LCK  
Sbjct: 383 KMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQ 442

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
            +  A      M + G   N+ +YN +++   K  +ID A+N+FE M     V DS TY+
Sbjct: 443 LVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYN 502

Query: 393 SMVHNLCKAKRLPSASKLL 411
            ++  LCK+ R+  A +L 
Sbjct: 503 CLIDGLCKSGRISHAWELF 521



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 191/409 (46%), Gaps = 5/409 (1%)

Query: 33  GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSL 92
           G+R G+ P +VT ++LI+ YC        +++L  + + G   + +T  +++ G   N  
Sbjct: 105 GLR-GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGE 163

Query: 93  LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
           +  +L+  D ++  G   D  +Y +L++ L ++G   EA  +   M    + P    +N+
Sbjct: 164 VRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNM 223

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++GLCK+     A  ++  +   G  P++ TY  LI G C  G+ R    +L ++ D  
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              N  TY  ++    +        ++ + M  +G   D   + T+++ +     + EA 
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEAR 343

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              +     G+  D+ SYN LI  YCK  +++ A  L ++M  +    +  T++ LIDGL
Sbjct: 344 KLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDS 388
           CK+G I  A      ++  G   N+  YN ++D L K   +D AI +F  M       + 
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV 463

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            +Y+ +++  CK+KR+  A  L     +  +         ++DGL  SG
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 190/414 (45%), Gaps = 4/414 (0%)

Query: 23  LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
           ++ A A+    I +  LP VV +NM++ +  +   +    ++  +M   GI+P +VT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 83  LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
           LI        +  +  +L  +L+ G   +  +  ++M  L   G+  +A      ++   
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
                 T+  ++NGLCK   T  A  +   ++     P +V YN+++ GLCK G +  AR
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
            +  ++   G  P+  TYT ++       +++    +L  M  +    + + Y  +I A 
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
            K G L +A D    M+  G + D+V++NTL++ YC    +  A  L D   + G   D 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
           +++ ILI G CK   I  A      MN      N+  Y+ ++D L K G+I +A  +F +
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +       +  TY+ M+  LCK + +  A +L     + G+    S+   +++G
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 132/261 (50%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L+    NI +   CK   L KA  +    I  G  PD+VT+N L+  YC +        +
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            +   E GI+PDV +YN LI G  +N+ +  +L L ++M    + P++ +Y+SL+  L +
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCK 405

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            G+   A  +F  +  G  +P   T+NIML+ LCK +  D A+ +F  + + G  P + +
Sbjct: 406 SGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS 465

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           YNILI G CK+ R+  A  + +E+      P+++TY  ++    ++ +     E+ + M 
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMH 525

Query: 245 RKGYTFDGFGYCTVIAAFVKI 265
             G   D   Y  +  AF KI
Sbjct: 526 DGGPPVDVITYNILFDAFSKI 546



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 39/288 (13%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           D+A+ +F  L     +P +V +N+++  + K     TA  + K++G  G  P+ +T + +
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + C                            YC        +G +  A   +  ++  G 
Sbjct: 120 INC----------------------------YC-------HLGHMGFAFSVLGMVLKRGY 144

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
           QL+ ++  T++   C  G++  A    D +  QGF  D+ T+  LI+GLCK G  + A  
Sbjct: 145 QLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFE 204

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
            L  M       N+  YN IVD L KDG +  A +++  +  +    D FTY+ ++H  C
Sbjct: 205 LLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFC 264

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
              +    ++LL   +   V +       ++D L   G   +A  +++
Sbjct: 265 GLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRN 312


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 147/283 (51%)

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           E+LE G P  ++ +N LMH   + G+   A  VF  +    L P   +FN ++NG  K  
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             D   R+   ++  G  P++ TY++LI GLCK  R+  A  +  E+ D+G  PN +T+T
Sbjct: 186 DLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFT 245

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           T++    +N +  L ++I   M  +G++ D   Y T+I    K G LK+A   +++M   
Sbjct: 246 TLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK 305

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
           G++ D ++Y TLI+  CKEG LE A+ L + M K+    D   +T LI GLC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDA 365

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
              L  M ++G   + E Y  I++   K G +  A  +   M+
Sbjct: 366 EKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQ 408



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 151/273 (55%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV++N+L+ G  +   L     L + M 
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMR 198

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  + DEAN +F +M+   L P   TF  +++G CKN   D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLD 258

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ ++R +   GF P++VTYN LI GLCK G L+ AR++L E+   G  P+ ITYTT++
Sbjct: 259 LAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLI 318

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +    +   E+   M ++    D   Y  +I    + GR  +A   + +M+  G++
Sbjct: 319 DGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLK 378

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
            D  +Y  ++N +CK+G ++ A  LL EM++ G
Sbjct: 379 PDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 146/283 (51%)

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           E G    +  +N L+    +   +  +  + D + + G+ P V S+N+LM+   +LG  D
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E  R+   M    + P   T+++++NGLCK    D A  +F  +  +G VP  VT+  LI
Sbjct: 189 EGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLI 248

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
            G CK GRL  A  I +++ + G +P+ +TY T++    +    K    +L  M RKG  
Sbjct: 249 DGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLK 308

Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
            D   Y T+I    K G L+ A +  E+M+ + ++LD V Y  LI   C+EG+   A  +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKM 368

Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
           L EM + G + D  T+T++++  CK G++K A   L  M + G
Sbjct: 369 LREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       ++ + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 107 VLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWG 166

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ +++ T+M    +      G  + +AM+  G   D + Y  +I    K  R+ EA 
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEAN 226

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
               +M+ +G+  + V++ TLI+ +CK G+L+ A  +  +M  QGF  D  T+  LI GL
Sbjct: 227 GLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGL 286

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K AR  L+ M++ G   +   Y  ++D   K+G ++ A  + E M  +    D 
Sbjct: 287 CKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDD 346

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+  R   A K+L   L+ G++
Sbjct: 347 VVYTALIFGLCQEGRAVDAEKMLREMLRVGLK 378



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 107/211 (50%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV PDV TY++LI+  C+    D    +   M + G+ P+ VT+ +LI G  +N  L  +
Sbjct: 201 GVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLA 260

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +D+  +ML  G  PDV +YN+L++ L + G   +A  +  +M    L P   T+  +++G
Sbjct: 261 MDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDG 320

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK    + A  +   + K     + V Y  LI GLC+ GR   A  +L+E+   G  P+
Sbjct: 321 SCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPD 380

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
             TYT IM    +    K   E+L  M+R G
Sbjct: 381 DETYTMIMNEFCKKGDVKKASELLREMQRNG 411



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK +R+++A  +  + +  G++P+ VT+  LID +C+    D    I  +M  
Sbjct: 210 SVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLN 269

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G SPDVVTYN+LI G  +   L  +  LLDEM   G+ PD  +Y +L+    + G  + 
Sbjct: 270 QGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLET 329

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  + + MI   +      +  ++ GLC+     +A +M R + + G  P+  TY +++ 
Sbjct: 330 AFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMN 389

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAIT 219
             CK G ++ A  +L+E+  +G  P  +T
Sbjct: 390 EFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 6/335 (1%)

Query: 117 SLMHCLFQLGKPDEANRVFQDMI--CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
           SL+  +      D A+ VF  ++   G        F+ ++    ++ +  +A+  FR  +
Sbjct: 34  SLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTK 93

Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
           KH F     T   +++ L K    +      KE+ + G+  +   +  +M    +  + +
Sbjct: 94  KHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMR 153

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
           L   +  A+ + G       + T++  ++K+G L E       M   GVQ D+ +Y+ LI
Sbjct: 154 LAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLI 213

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
           N  CKE +++ A  L  EM   G   +  T T LIDG CK G +  A      M   GF 
Sbjct: 214 NGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFS 273

Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
            ++  YN ++  L K G +  A  + + M  K    D  TY++++   CK   L +A +L
Sbjct: 274 PDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFEL 333

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               +K  +R+      A++ GL   G   +A+K+
Sbjct: 334 RERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKM 368


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 199/442 (45%), Gaps = 41/442 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   C+  +++KA + I +  R  ++PDV TYN++ID  C+             M E   
Sbjct: 17  VKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE--- 73

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYN+L+ G  +N  ++ +  L   M   GI P   +Y +L+    ++ + + A  
Sbjct: 74  -PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 132

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + Q M     +P   ++  ++NGLCKNR  D A ++F  ++  G  P+ VTYN LI GLC
Sbjct: 133 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 192

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
              RL  A+ +L  + ++   P+ IT+T +++      + K    +   M ++G   D  
Sbjct: 193 VKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 252

Query: 254 GYCTVIAA------------------------------FVKIGRLK---EATDYMEQMVT 280
            +  +++                               F ++GR +    A   +++M  
Sbjct: 253 THTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMAR 312

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            GV  ++V+Y           +   AY     M +QG E D   + +L+DG CKA  +  
Sbjct: 313 RGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDM 372

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A   + YM++ G   N+  YN +V    + GK++    +  +M  +    D  T+S++V 
Sbjct: 373 AEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVA 432

Query: 397 NLCKAKRLPSASKLLLSCLKSG 418
            L +  ++ +A   L   +  G
Sbjct: 433 GLFRVGQVDAAYSFLNLAMSQG 454



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 155/312 (49%), Gaps = 6/312 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P+  SY  L+  L + GK D+A     +M    L P   T+N++++ LCK R    A+  
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  + +    P++VTYN L+ GLCK GR+  A  +   +  +G  P+ +TYTT++    +
Sbjct: 68  FETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
             +++    +L  M  +  +   + YC++I    K  ++ +A    E+M   G + D V+
Sbjct: 124 MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVT 183

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           YNTLI+  C + +L  A  LL  M +  F+ DK T T LI+GLC    IK A +  + M 
Sbjct: 184 YNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 243

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--KDSFTYSSMVHNLCKAKRLPSA 407
           K G   +L  +  +V +L    K+  A++V  +     +    Y+ +   L + +    A
Sbjct: 244 KQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRA 303

Query: 408 SKLLLSCLKSGV 419
           ++LL    + GV
Sbjct: 304 ARLLQKMARRGV 315



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 8/270 (2%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           D  P   ++  ++  LC+    D A      + +   VP++ TYN++I  LCKA R+  A
Sbjct: 5   DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 64

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
                E  ++   P+ +TY T++    +N +      +  +M+  G T     Y T+I  
Sbjct: 65  ----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDV 120

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           F K+ + + A   ++ M +      + SY ++IN  CK  K++ AY L +EM+  G + D
Sbjct: 121 FCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD 180

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
           + T+  LI GLC    +  A+  L  M +  F  +   +  +++ L    +I  A  +F+
Sbjct: 181 RVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQ 240

Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSA 407
            M       D  T++ +V  LC  ++L  A
Sbjct: 241 GMAKQGCAPDLVTHTVLVSKLCIRRKLRPA 270



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 35/219 (15%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PNA++Y  ++K   R  K       ++ M R+    D F Y  VI    K  R+  A ++
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            E M     + D+V+YNTL+   CK G++  A  L   ME  G      T+T LID  CK
Sbjct: 68  FETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
               + A   L+ M        +                               ++Y S+
Sbjct: 124 MCQFETAYGLLQLMASRKCSPTV-------------------------------YSYCSI 152

Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           ++ LCK +++  A +L      +G +  +     ++ GL
Sbjct: 153 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 191


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 200/440 (45%), Gaps = 42/440 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  +CKA + E A  +  +    G+  + V +++L++   +    D    +L  +   
Sbjct: 453 ILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSR 512

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G+  D V Y SL+ G  +    S +L++++EM E  IP DV +YN L++ L + GK  EA
Sbjct: 513 GLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EA 571

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             V+  MI   L P  AT+NIM+   CK    DNAL ++  ++ H  +P  +T N L+ G
Sbjct: 572 KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVG 631

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
           L +AG +  A  +L E+   G  PN + +  ++    ++ K    L++   +   G   +
Sbjct: 632 LSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKIN 691

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL--- 308
              Y  +I  F ++   K+AT  ++ M+ DG   D V+YN LI  YC+   ++ A     
Sbjct: 692 QEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYT 751

Query: 309 --------------------------------LLDEMEKQGFECDKYTHTILIDGLCKAG 336
                                           L D+M++ G   D  T+  LI G  K G
Sbjct: 752 QMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIG 811

Query: 337 NIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
           N K + RL+ E + + GF      YN ++    K GK+D A  +   M+V+     S TY
Sbjct: 812 NKKESIRLYCEMVAQ-GFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTY 870

Query: 392 SSMVHNLCKAKRLPSASKLL 411
             ++   C   + P   + L
Sbjct: 871 DILICGWCNLSKHPDLDRTL 890



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 217/464 (46%), Gaps = 25/464 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           ++ T   N  +  FC+   + +A   +   ++     D +T N+L+  +C+      G  
Sbjct: 74  EVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGER 133

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           I++ +   G   DV+ +N+LI G  +   +S +LDL++ M + G+  D+ SYN+L++   
Sbjct: 134 IMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFC 193

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNI---------------------MLNGLCKNRY 162
           + G+ D+A  +  ++        +  FNI                     +++  CK   
Sbjct: 194 KRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHG 253

Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
            + A  ++  +  +GF+P++VTY+ ++ GLCK GRL  A+ +L+E+   G  PN + YTT
Sbjct: 254 LEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTT 313

Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
           ++   F+           S +  +G T D     T++    K  + KEA D    +    
Sbjct: 314 LIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLN 373

Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
           +  + ++Y  LI+ YCK G +E    LL EME++    +  T++ +I+G  K G +  A 
Sbjct: 374 LIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAI 433

Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
             ++ M       N   Y  ++D   K GK + A +++  M++     ++  +  +V+NL
Sbjct: 434 NVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNL 493

Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
            + KR+  A +LL      G+ +      +++DG   +G    A
Sbjct: 494 KRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 212/462 (45%), Gaps = 26/462 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V  FC+    +  E I+ + +  G   DV+ +N LID YC+         ++ RMR+
Sbjct: 116 NILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRK 175

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE---------------------MGIP 109
            G+  D+V+YN+LI G  +      +  LL E+ E                     + + 
Sbjct: 176 EGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLE 235

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
            D+ +Y +++    +    +EA  ++++MI     P   T++ ++NGLCK+     A  +
Sbjct: 236 ADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL 295

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
            R ++K G  P  V Y  LI  L KAG    A     +L   G   + +  TT++   F+
Sbjct: 296 LREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFK 355

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
           + K K   ++  A+ +     +   Y  +I  + K+G ++     +++M    +  ++++
Sbjct: 356 SSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           Y+++IN Y K+G L+ A  ++ +M  Q    + Y + ILIDG CKAG  + A      M 
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
             G   N   ++ +V+ L +  ++D A  + + +  +    D   Y+S++    KA +  
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKES 535

Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
           +A  ++    +  +         +++GL   G + EAK + S
Sbjct: 536 AALNMVEEMTEKSIPFDVVTYNVLINGLLEHG-KYEAKSVYS 576



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 202/419 (48%), Gaps = 10/419 (2%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L++ +CT       K+++ ++AE +     +L ++P+ +TY  LID YC+    +   ++
Sbjct: 341 LDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESL 400

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M E  I+P+V+TY+S+I G T+  +L  +++++ +ML+  I P+ + Y  L+    +
Sbjct: 401 LQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCK 460

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK + A  ++ +M    L      F++++N L + +  D A  + + +   G + + V 
Sbjct: 461 AGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVN 520

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  KAG+   A  +++E+ +     + +TY  ++     + KY+    + S M 
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMI 579

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   +   Y  +I A+ K G L  A +   +M +  +    ++ NTL+    + G++E
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIE 639

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L+EM   G   +   H +L++   K+G         E +  +G   N EAYN ++
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI 699

Query: 365 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
               +      A +V + M     V D+ TY++++   C++  +  A       L  GV
Sbjct: 700 VVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGV 758



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 42/410 (10%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           + T+CK + LE+A A+  + I  G LPDVVTY+ +++  C+         +L  M++ G+
Sbjct: 245 ISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV 304

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            P+ V Y +LI    +      +     +++  G+  D+    +L+  LF+  KP EA  
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCK------------------------------NRYT 163
           +F+ +   +L P + T+  +++G CK                              N YT
Sbjct: 365 MFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYT 424

Query: 164 -----DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
                D A+ + + +     +P    Y ILI G CKAG+   A  +  E+  SG   N +
Sbjct: 425 KKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNV 484

Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
            +  ++    R ++     E+L  +  +G   D   Y +++  F K G+   A + +E+M
Sbjct: 485 LFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEM 544

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
               +  D+V+YN LIN   + GK EA   +   M + G   ++ T+ I+I   CK G +
Sbjct: 545 TEKSIPFDVVTYNVLINGLLEHGKYEAKS-VYSGMIEMGLAPNQATYNIMIKAYCKQGEL 603

Query: 339 KGARLHLEYMNKIGFDSNLEAY---NCIVDRLGKDGKIDHAINVFESMEV 385
             A   LE  N++     + +    N +V  L + G+I+ A+NV   M V
Sbjct: 604 DNA---LELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 196/417 (47%), Gaps = 21/417 (5%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            V P+V T+N+L+ A+C+  +       L+ +R   +  D VTYN++I G  ++ L++ +
Sbjct: 40  AVPPNVYTHNVLVHAWCKMGNL---ILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQA 96

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
              L  M++     D  + N L+    ++G      R+  +++ G        FN +++G
Sbjct: 97  FGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDG 156

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
            CK      AL +   ++K G + ++V+YN LI G CK G    A+ +L E+ +S    +
Sbjct: 157 YCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKD 216

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
           ++ +    +     +   L LE            D   Y T+I+ + K   L+EA    E
Sbjct: 217 SVFFNIDDRI---KKDDNLNLEA-----------DLITYTTIISTYCKQHGLEEARALYE 262

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M+ +G   D+V+Y++++N  CK+G+L  A  LL EM+K G + +   +T LID L KAG
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
           +   A      +   G   +L     +VD L K  K   A ++F ++     + +S TY+
Sbjct: 323 SAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYT 382

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           +++   CK   +     LL    +  +        ++++G    G   EA  +  K+
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 28/390 (7%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           MR+  I P ++ +N LI       L+S   D+  EML   +PP+V+++N L+H   ++G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A  + +++   D+   T T+N ++ G C++   + A      + K     + +T NI
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+KG C+ G  +    I+  L   G   + I + T++    +  +  L L+++  M+++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQM-----VTDGV----------------QLD 286
              D   Y T+I  F K G   +A   + ++     V D V                + D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           +++Y T+I+ YCK+  LE A  L +EM   GF  D  T++ +++GLCK G +  A+  L 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M K+G D N  AY  ++D L K G    A      + V+    D    +++V  L K+ 
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +   A  +  +  K  +        A++DG
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDG 387



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 12/224 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K++    N  +  FC+    +KA +++   IR G + D VTYN LI  YC+         
Sbjct: 689 KINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALA 748

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
              +M   G+SP++VTYN L+ G     L++   +L D+M E G+ PD  +Y++L+    
Sbjct: 749 TYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYG 808

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G   E+ R++ +M+     P T+T+N++++   K    D A  +   +Q  G  P   
Sbjct: 809 KIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSS 868

Query: 184 TYNILIKGLCKAGR-----------LRT-ARWILKELGDSGHAP 215
           TY+ILI G C   +            RT A+ ++ E+ D G  P
Sbjct: 869 TYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVP 912



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 12/210 (5%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C+++ ++KA A     +  GV P++VTYN+L+              + ++M+E
Sbjct: 731 NALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKE 790

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G++PD  TY++LI+G  +      S+ L  EM+  G  P   +YN L+    ++GK D+
Sbjct: 791 NGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQ 850

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLC------------KNRYTDNALRMFRGLQKHGF 178
           A  +  +M    + P ++T++I++ G C            K  Y  +A  +   +   GF
Sbjct: 851 ARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGF 910

Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKEL 208
           VP   T   +     + G++  A  +LKE+
Sbjct: 911 VPCKSTIACISSTFARPGKMLDAEKLLKEI 940



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 49/318 (15%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  V    +A  +EKA  ++ +   +G+ P++V + +L++A  +    +A   +  ++ +
Sbjct: 626 NTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVD 685

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+  +   YN+LI    R  +   +  +L  M+  G   D  +YN+L+    +     +
Sbjct: 686 MGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKK 745

Query: 131 ANRVFQDMICGDLTPCTATFNIML---------------------NGLCKNRYTDNAL-- 167
           A   +  M+   ++P   T+N++L                     NGL  +  T + L  
Sbjct: 746 ALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLIS 805

Query: 168 ------------RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
                       R++  +   GFVP+  TYN+LI    K G++  AR +L E+   G  P
Sbjct: 806 GYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPP 865

Query: 216 NAITYTTIMKCCFRNRKYKLGLE-------------ILSAMKRKGYTFDGFGYCTVIAAF 262
           ++ TY  I+ C + N      L+             +++ M  KG+         + + F
Sbjct: 866 SSSTY-DILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTF 924

Query: 263 VKIGRLKEATDYMEQMVT 280
            + G++ +A   ++++ +
Sbjct: 925 ARPGKMLDAEKLLKEIFS 942


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 192/422 (45%), Gaps = 41/422 (9%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   C+  +++KA + I +  R  ++PDV TYN++ID  C+             M E   
Sbjct: 42  VKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE--- 98

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVVTYN+L+ G  +N  ++ +  L   M   GI P   +Y +L+    ++ + + A  
Sbjct: 99  -PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + Q M     +P   ++  ++NGLCKNR  D A ++F  ++  G  P+ VTYN LI GLC
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
              RL  A+ +L  + ++G  P+ IT+T +++      + K    +   M ++G   D  
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277

Query: 254 GYCTVIAA------------------------------FVKIGRLK---EATDYMEQMVT 280
            +  +++                               F ++GR +    A   +++M  
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMAR 337

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            GV  ++V+Y           +   AY     M +QG E D   + +L+DG CKA  +  
Sbjct: 338 RGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDM 397

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
           A   + YM++ G   N+  YN +V    + GK++    +  +M  +    D  T+S++V 
Sbjct: 398 AEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVA 457

Query: 397 NL 398
            L
Sbjct: 458 GL 459



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 170/363 (46%), Gaps = 8/363 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            CK  R+ +A ++       G+ P  VTY  LID +C+   F+  Y +L  M     SP 
Sbjct: 111 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 170

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V +Y S+I G  +N  +  +  L +EM   G  PD  +YN+L+H L    +  EA  +  
Sbjct: 171 VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLT 230

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M+     P   TF  ++ GLC       A  +F+G+ K G  P+LVT+ +L+  LC   
Sbjct: 231 VMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILR 290

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
           +LR A  +++       A   I YT I +   R R +     +L  M R+G   +   Y 
Sbjct: 291 KLRPALSVVRNYPACPEA--VILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTY- 347

Query: 257 TVIAAFVKIGRLKE---ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
              A F  +G  KE   A     +M+  G++ D+V+YN L++ +CK  +L+ A  ++  M
Sbjct: 348 --TAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYM 405

Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
           ++ G   +  T+  L+   C+ G ++     L  M   G   ++  ++ +V  L   G+ 
Sbjct: 406 DQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQA 465

Query: 374 DHA 376
           D A
Sbjct: 466 DAA 468



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 6/312 (1%)

Query: 110 PDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRM 169
           P+  SY  L+  L + GK D+A     +M    L P   T+N++++ LCK R    A+  
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92

Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
           F  + +    P++VTYN L+ GLCK GR+  A  +   +  +G  P+ +TYTT++    +
Sbjct: 93  FETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 148

Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
             +++    +L  M  +  +   + YC++I    K  ++ +A    E+M   G + D V+
Sbjct: 149 MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVT 208

Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
           YNTLI+  C + +L  A  LL  M + GF+ DK T T LI+GLC    IK A +  + M 
Sbjct: 209 YNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 268

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--KDSFTYSSMVHNLCKAKRLPSA 407
           K G   +L  +  +V +L    K+  A++V  +     +    Y+ +   L + +    A
Sbjct: 269 KQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRA 328

Query: 408 SKLLLSCLKSGV 419
           ++LL    + GV
Sbjct: 329 ARLLQKMARRGV 340



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 8/296 (2%)

Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
           N+L+  L +  + ++   VF+ +   D  P   ++  ++  LC+    D A      + +
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
              VP++ TYN++I  LCKA R+  A     E  ++   P+ +TY T++    +N +   
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQ 119

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
              +  +M+  G T     Y T+I  F K+ + + A   ++ M +      + SY ++IN
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
             CK  K++ AY L +EM+  G + D+ T+  LI GLC    +  A+  L  M + GF  
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP 239

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSA 407
           +   +  +++ L    +I  A  +F+ M       D  T++ +V  LC  ++L  A
Sbjct: 240 DKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA 295



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 8/255 (3%)

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           VT N L+  L +A R      + + +      PNA++Y  ++K   R  K       ++ 
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
           M R+    D F Y  VI    K  R+  A ++ E M     + D+V+YNTL+   CK G+
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM----PEPDVVTYNTLLGGLCKNGR 116

Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
           +  A  L   ME  G      T+T LID  CK    + A   L+ M        + +Y  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 363 IVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
           I++ L K+ K+D A  +FE M++     D  TY++++H LC  +RL  A  LL   +++G
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 419 VRILKSAQKAVVDGL 433
            +  K    A+++GL
Sbjct: 237 FQPDKITFTALIEGL 251


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 201/443 (45%), Gaps = 5/443 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI + + C      KAE ++   ++   L +  TYN ++  Y +   F A   +L  M  
Sbjct: 159 NILLNSLCTNGEFRKAEDML-QKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMER 217

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
             I  D+ TYN +I    R    + +  LL  M +  + PD  +YN+L++  F  GK + 
Sbjct: 218 DSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINH 277

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A  VF  M+   L P  AT+  M++G C+NR  D AL +   ++  G +P  +TY+ L+ 
Sbjct: 278 ARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLN 337

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK   L  A  ++ +L   G   N    T ++    +  +     +IL +M   G   
Sbjct: 338 GYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDP 397

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y  +I    ++ ++ E  + + +M   G+  + V Y TLI  YCK G ++ A    
Sbjct: 398 DVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHF 457

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            ++ ++G   +   H  L+    + G I  A    +YM+++    N  ++NCI+D     
Sbjct: 458 VDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHR 517

Query: 371 GKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
           GKI  A +V++ M       +  TY +++  LC+   L  A + +   L     + +   
Sbjct: 518 GKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTF 577

Query: 427 KAVVDGLRHSGCRREAKKIQSKI 449
            A++ G+   G   EA  I  K+
Sbjct: 578 NALLLGICKYGTLDEALDICEKM 600



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 217/472 (45%), Gaps = 39/472 (8%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           + K  R + A  ++ D  R  +  D+ TYN++ID  C+       + +L RMR+  ++PD
Sbjct: 199 YVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPD 258

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN+LI G      ++ +  + + ML   + P V +Y +++    +  + D+A  V  
Sbjct: 259 ECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLS 318

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    + P   T++ +LNG CK      AL +   L+  G         ILI G C+ G
Sbjct: 319 EMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVG 378

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            +  A+ ILK + + G  P+ +TY+ ++    R  K     EILS M++ G   +   Y 
Sbjct: 379 EISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYT 438

Query: 257 TVIAAFVKIGRLKEATD------------------------YMEQMVTDG---------- 282
           T+I  + K G +K A                          Y E M+T+           
Sbjct: 439 TLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRM 498

Query: 283 -VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            +  + VS+N +I+ YC  GK+  A+ + D+M + G   +  T+  L+ GLC+ G++  A
Sbjct: 499 NISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 558

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
           +  +  +  I    + + +N ++  + K G +D A+++ E M     + D  TY+ ++  
Sbjct: 559 KQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSG 618

Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
            C+  ++  A  +L   L+ GV     A   +++GL + G  + A  +  +I
Sbjct: 619 FCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEI 670



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 195/408 (47%), Gaps = 5/408 (1%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           +  N  +   CK   L++A  I    ++   LPD+ TY +L+  +C+         +L  
Sbjct: 575 KTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQM 634

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLG 126
           M E G+ PD V Y  L+ G      +  +  +  E++ + G+  D  +YNSLM+   + G
Sbjct: 635 MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 694

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
             +   R+  DM   ++ P +A++NI+++G  K      +L +++ + + G  P+ VTY 
Sbjct: 695 NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYR 754

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +LI GL + G +  A   L+++   G  P+ + +  ++       K    L + + MK  
Sbjct: 755 LLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCL 814

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
             +     +  +I   ++   L ++ + + +M+  G+Q +   Y  L+N  C+ G+++ A
Sbjct: 815 HLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 874

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + L +EM+  G    +   + +I GLC+ G ++ A +    M + G    +  +  ++  
Sbjct: 875 FRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHS 934

Query: 367 LGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKL 410
           L K+ KI  A+++   ME+     D  +Y+ ++  LCK K +  A  L
Sbjct: 935 LCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDL 982



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 197/441 (44%), Gaps = 40/441 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  F    ++  A  +    +R  ++P V TY  +ID YC+    D   ++L+ M  
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+ P  +TY++L+ G  + S+L  +LDL+ ++   GI  +      L+    Q+G+  +
Sbjct: 323 TGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISK 382

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A ++ + M+   + P   T++ ++NG+C+         +   +QK G +P  V Y  LI 
Sbjct: 383 AKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLIC 442

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
             CKAG ++ A     ++   G   N + +  +++  +R             M R   +F
Sbjct: 443 YYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISF 502

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG---------------------VQ----- 284
           +   +  +I ++   G++ EA    + MV  G                     VQ     
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562

Query: 285 ---LDIVS------YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
              LDI S      +N L+   CK G L+ A  + ++M K     D +T+TIL+ G C+ 
Sbjct: 563 FCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRK 622

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-----DSFT 390
           G I  A + L+ M + G   +  AY C+++ L  +G++  A  VF+ +  K     D   
Sbjct: 623 GKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIA 682

Query: 391 YSSMVHNLCKAKRLPSASKLL 411
           Y+S+++   K   + +  +++
Sbjct: 683 YNSLMNGYLKGGNVNTIKRMM 703



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 198/435 (45%), Gaps = 9/435 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  + ++C   ++ +A ++  D +R G  P+V TY  L+   CQ          +  + 
Sbjct: 507 FNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLL 566

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
           +   + D  T+N+L+ G  +   L  +LD+ ++M++    PD+ +Y  L+    + GK  
Sbjct: 567 DIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKIL 626

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNIL 188
            A  + Q M+   + P T  +  +LNGL        A  +F+ +  K G   + + YN L
Sbjct: 627 PALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSL 686

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           + G  K G + T + ++ ++  +   PN+ +Y  +M    +  ++   L +   M RKG 
Sbjct: 687 MNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI 746

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
             D   Y  +I    + G +  A  ++E+MV +G+  D + ++ LI  + ++ K+  A  
Sbjct: 747 RPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALR 806

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           L + M+         T + +I+GL +   +  +   L  M ++G   N   Y  +V+   
Sbjct: 807 LFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKC 866

Query: 369 KDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + G+ID A  + E M+    V      SS++  LC+  +L  A  +  + ++SG+     
Sbjct: 867 RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGM----V 922

Query: 425 AQKAVVDGLRHSGCR 439
              A    L HS C+
Sbjct: 923 PTVATFTTLMHSLCK 937



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 146/316 (46%)

Query: 38   VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
            V P+  +YN+L+  Y +   F     +   M   GI PD VTY  LI G +   L+  ++
Sbjct: 711  VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAV 770

Query: 98   DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
              L++M+  GI PD   ++ L+    +  K   A R+F  M C  L+P + TF+ M+NGL
Sbjct: 771  KFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGL 830

Query: 158  CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
             +  Y D +  +   + + G  P    Y  L+   C+ G +  A  + +E+   G  P  
Sbjct: 831  IRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAE 890

Query: 218  ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
            +  ++I++   R  K +  + + S M R G       + T++ +  K  ++ +A      
Sbjct: 891  VAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRL 950

Query: 278  MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
            M    +++D+VSYN LI   CK+  +  A  L  EM+ +G   +  T+  L   +   G 
Sbjct: 951  MELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGR 1010

Query: 338  IKGARLHLEYMNKIGF 353
            ++     LE + + G 
Sbjct: 1011 MQNGEELLEDIEERGL 1026



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 107/210 (50%)

Query: 6    STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
            S++  +  +    + N L+++  ++ + +++G+ P+   Y  L++A C+    D  + + 
Sbjct: 819  SSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 878

Query: 66   NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
              M+  GI P  V  +S+I G  R   L  ++ +   M+  G+ P V ++ +LMH L + 
Sbjct: 879  EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKE 938

Query: 126  GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
             K  +A  + + M    L     ++N+++ GLCK+++  +AL ++  ++  G  P + TY
Sbjct: 939  SKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTY 998

Query: 186  NILIKGLCKAGRLRTARWILKELGDSGHAP 215
              L   +   GR++    +L+++ + G  P
Sbjct: 999  ITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 40/272 (14%)

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
           F  ++ T NIL+  LC  G  R A  +L+++  S    N+ TY TI+    +  ++K  L
Sbjct: 151 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKKGRFKAAL 209

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            +L  M+R     D + Y  +I    +I R   A   +++M  D +  D  +YNTLIN +
Sbjct: 210 CVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGF 269

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNL 357
             EGK+  A  + + M +Q       T+T +IDG C                        
Sbjct: 270 FGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYC------------------------ 305

Query: 358 EAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 413
                      ++ +ID A++V   ME+        TYS++++  CK   L  A  L++ 
Sbjct: 306 -----------RNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVD 354

Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
               G+ I K+    ++DG    G   +AK+I
Sbjct: 355 LKSRGITINKTMCTILIDGFCQVGEISKAKQI 386



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 38/257 (14%)

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
           + N + +  ++K   + RK       +  M   G+        +++ A V+ G  K    
Sbjct: 82  STNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWL 141

Query: 274 YMEQMVTDGVQLDIVSYNTLIN----------------------------------LYCK 299
           ++ + +     LD+ + N L+N                                   Y K
Sbjct: 142 FLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVK 201

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
           +G+ +AA  +L++ME+   + D YT+ I+ID LC+      A L L+ M K     +   
Sbjct: 202 KGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECT 261

Query: 360 YNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
           YN +++    +GKI+HA  VF  M     V    TY++M+   C+ +R+  A  +L    
Sbjct: 262 YNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEME 321

Query: 416 KSGVRILKSAQKAVVDG 432
            +GV   +    A+++G
Sbjct: 322 ITGVMPSELTYSALLNG 338



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 29/234 (12%)

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y + ++ L +A     A  +LK L  +G +  AI +T++++   R               
Sbjct: 36  YCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTAI-FTSLLRIISR--------------- 79

Query: 245 RKGYTFDGFGYCT---VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
                FD   +     +I A+VK  ++ +A   +  M   G +   V+ N+++    +EG
Sbjct: 80  -----FDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEG 134

Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
           + +  +L L E   + F  D  T  IL++ LC  G  + A   L+ M      SN   YN
Sbjct: 135 ESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCL-SNSATYN 193

Query: 362 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
            I+    K G+   A+ V E ME      D +TY+ M+  LC+ KR   A  LL
Sbjct: 194 TILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLL 247


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 224/510 (43%), Gaps = 88/510 (17%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R   + VC  C++ R  +A ++  +    G  P+V TY +LID  C+    D    +L
Sbjct: 289 TVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKML 348

Query: 66  NRMREAGISPDVV-----------------------------------TYNSLIAGATRN 90
           N M E G++P VV                                   TYN LI G  R 
Sbjct: 349 NEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRG 408

Query: 91  SLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
             +  ++ LL++M+E  + PDV +YN+L+H L ++G  D A+R+F+ MI    +P   TF
Sbjct: 409 KSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTF 468

Query: 151 N-----------------------------------IMLNGLCKNRYTDNALRMFRGLQK 175
           N                                    +++G CK    ++A  +F+ +  
Sbjct: 469 NAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLA 528

Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
              +P  +T+N++I GL K G+++ A  +++++      P   TY  +++   +   +  
Sbjct: 529 EECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDR 588

Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
             EIL+ +   GY  +   Y   I A+   GRL+EA + + ++  +GV LD   YN LIN
Sbjct: 589 ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLIN 648

Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            Y   G L++A+ +L  M   G E    T++IL+  L    + K      E  N +G D 
Sbjct: 649 AYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKK------EGSNPVGLDV 702

Query: 356 NLEAYNCIVDRLGKDGKIDHAIN--VFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
           +L   N  VD      KID  I   +FE M     V +  TYS +++ LCK  RL  A  
Sbjct: 703 SLT--NISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFS 760

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           L     + G+    S  + + + L  S C+
Sbjct: 761 LYHHMREGGI----SPSEIIHNSLLSSCCK 786



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 187/388 (48%), Gaps = 12/388 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
            C+A +L +A          G  P V TY +L+ A C+        ++   MRE G  P+
Sbjct: 265 LCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPN 324

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           V TY  LI    +   +  +L +L+EM+E G+ P V  +N+L+    + G  ++A  V  
Sbjct: 325 VYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
            M    + P   T+N ++ G C+ +  D A+ +   + +    P++VTYN LI GLC+ G
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            + +A  + + +   G +P+  T+   M C  R  +     +IL ++K K    +   Y 
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            +I  + K G+++ A    ++M+ +    + +++N +I+   KEGK++ A LL+++M K 
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             +   +T+ IL++ + K  +   A   L  +   G+  N+  Y   +      G+++ A
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEA 624

Query: 377 INVFESMEVK--------DSFTYSSMVH 396
               E M +K        DSF Y+ +++
Sbjct: 625 ----EEMVIKIKNEGVLLDSFIYNLLIN 648



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 206/446 (46%), Gaps = 10/446 (2%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           LN  + ++CK   +  A    +  +R    PD+ TY  L+  YC+    +    +   M 
Sbjct: 192 LNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMP 251

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
                 + V+Y +LI G      L  +L+    M E G  P V +Y  L+  L + G+  
Sbjct: 252 RR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGREL 307

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           EA  +F +M      P   T+ ++++ LCK    D AL+M   + + G  P +V +N LI
Sbjct: 308 EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI 367

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCF-RNRKYKLGLEILSAMKRKGY 248
              CK G +  A  +L  +      PN  TY  ++ C F R +     + +L+ M     
Sbjct: 368 GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELI-CGFCRGKSMDRAMALLNKMVESKL 426

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
           + D   Y T+I    ++G +  A+     M+ DG   D  ++N  +   C+ G++  A+ 
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
           +L+ ++++  + +++ +T LIDG CKAG I+ A    + M       N   +N ++D L 
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546

Query: 369 KDGKIDHAINVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           K+GK+  A+ + E M   +VK +  TY+ +V  + K      A+++L   + SG +    
Sbjct: 547 KEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
              A +      G   EA+++  KI+
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKIK 632



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 187/388 (48%), Gaps = 8/388 (2%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
            V P+++T N ++++YC+  +         R+      PD+ TY SL+ G  RN  +  +
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERA 243

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             +   M       +  SY +L+H L + GK  EA   +  M      P   T+ +++  
Sbjct: 244 CGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCA 299

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC++     AL +F  +++ G  P + TY +LI  LCK GR+  A  +L E+ + G AP+
Sbjct: 300 LCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPS 359

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            + +  ++    +    +  + +L  M+ K    +   Y  +I  F +   +  A   + 
Sbjct: 360 VVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN 419

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +MV   +  D+V+YNTLI+  C+ G +++A  L   M + GF  D++T    +  LC+ G
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYS 392
            +  A   LE + +    +N  AY  ++D   K GKI+HA ++F+ M  ++    S T++
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            M+  L K  ++  A  L+    K  V+
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVK 567



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 207/465 (44%), Gaps = 33/465 (7%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + R  N  +C FC+   +++A A++   +   + PDVVTYN LI   C+    D+   + 
Sbjct: 394 NVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLF 453

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G SPD  T+N+ +    R   +  +  +L+ + E  +  +  +Y +L+    + 
Sbjct: 454 RLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKA 513

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GK + A  +F+ M+  +  P + TFN+M++GL K     +A+ +   + K    P L TY
Sbjct: 514 GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTY 573

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NIL++ + K      A  IL  L  SG+ PN +TYT  +K      + +   E++  +K 
Sbjct: 574 NILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKN 633

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL-----INLYCKE 300
           +G   D F Y  +I A+  +G L  A   + +M   G +   ++Y+ L     I  + KE
Sbjct: 634 EGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE 693

Query: 301 GK------------------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           G                              +L ++M + G   +  T++ LI+GLCK G
Sbjct: 694 GSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVG 753

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
            +  A     +M + G   +   +N ++    K G    A+ + +SM     +    +Y 
Sbjct: 754 RLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYK 813

Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            ++  L +      A  +  S L+ G    + A K ++DGL  +G
Sbjct: 814 LLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTG 858



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 189/437 (43%), Gaps = 47/437 (10%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
            + T++ L+    +  +  A   + N M ++  SP   T+  L+    R   ++ +    
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATF--LLNLLRR---MNTAAAAA 139

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD---LTPCTATFNIMLNGL 157
           D   ++     + SYN L+ CL +    DE   ++++M+  +   + P   T N MLN  
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199

Query: 158 CKNRYTDNALRMFRGLQKHGFVPEL-------------------------------VTYN 186
           CK      A   F  + +    P+L                               V+Y 
Sbjct: 200 CKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYT 259

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM-KCCFRNRKYKLGLEILSAMKR 245
            LI GLC+AG+L  A      + + G  P   TYT ++   C   R+ +  L +   M+ 
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELE-ALSLFGEMRE 318

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
           +G   + + Y  +I    K GR+ EA   + +MV  GV   +V +N LI  YCK G +E 
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
           A  +L  ME +    +  T+  LI G C+  ++  A   L  M +     ++  YN ++ 
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 366 RLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
            L + G +D A  +F  M ++D F     T+++ +  LC+  R+  A ++L S  +  V+
Sbjct: 439 GLCEVGVVDSASRLFRLM-IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVK 497

Query: 421 ILKSAQKAVVDGLRHSG 437
             + A  A++DG   +G
Sbjct: 498 ANEHAYTALIDGYCKAG 514



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 127/314 (40%), Gaps = 29/314 (9%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI V    K    ++A  I+   I  G  P+VVTY   I AYC     +    ++ +++ 
Sbjct: 574 NILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKN 633

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLFQLGKPD 129
            G+  D   YN LI       LL  +  +L  M   G  P   +Y+ LM H + +  K +
Sbjct: 634 EGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE 693

Query: 130 EANRV----------------------------FQDMICGDLTPCTATFNIMLNGLCKNR 161
            +N V                            F+ M      P   T++ ++NGLCK  
Sbjct: 694 GSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVG 753

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             + A  ++  +++ G  P  + +N L+   CK G    A  +L  + +  H  +  +Y 
Sbjct: 754 RLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYK 813

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++   F     +    +  ++ R GY +D   +  +I    K G + + ++ +  M  +
Sbjct: 814 LLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKN 873

Query: 282 GVQLDIVSYNTLIN 295
           G +L   +Y+ L+ 
Sbjct: 874 GCRLHPETYSMLMQ 887



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 83/159 (52%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G +P++ TY+ LI+  C+    +  +++ + MRE GISP  + +NSL++   +  +   +
Sbjct: 734 GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEA 793

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           + LLD M+E      + SY  L+  LF+    ++A  VF  ++          + ++++G
Sbjct: 794 VTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDG 853

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           L K  Y D    +   ++K+G      TY++L++ L +A
Sbjct: 854 LAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/289 (19%), Positives = 112/289 (38%), Gaps = 44/289 (15%)

Query: 166 ALRMFRGLQKHGFVPE-LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           AL  FR +++H   P  L T++ L+  L +   LR A  +   +  S  +P+  T+   +
Sbjct: 69  ALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNL 128

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD--- 281
                 R+            +  +      Y  ++    +   + E     ++M+TD   
Sbjct: 129 L-----RRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGN 183

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            V  ++++ NT++N YCK G +  A L    + +     D +T+T L+ G C+       
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCR------- 236

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA 401
                                       +  ++ A  VF  M  +++ +Y++++H LC+A
Sbjct: 237 ----------------------------NDDVERACGVFCVMPRRNAVSYTNLIHGLCEA 268

Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
            +L  A +      + G          +V  L  SG   EA  +  ++R
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMR 317


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 191/401 (47%), Gaps = 5/401 (1%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I V  +CKA ++E+A   + +  +LG   + V+YN L+D Y      +    +L  M E 
Sbjct: 71  IMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEK 130

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEM-LEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           G+  + VT   LI G  +   +  +  +L EM  E G+  D ++Y +L+    ++GK  +
Sbjct: 131 GVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGD 190

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A RV  +M+   L       N ++NG CKN       R+   ++K    P+  +Y  L+ 
Sbjct: 191 AIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVD 250

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G C+ G    A  +  ++   G  P  +TY T++K   R   YK  L +   M ++G T 
Sbjct: 251 GYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTP 310

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           +  GYCT++    K+G    A    + ++  G+   I ++NT+IN  CK G+++ A    
Sbjct: 311 NEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETF 370

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             ME+ G + D  T+  L DG CK GN++ A    E M K     ++E YN ++  L   
Sbjct: 371 KRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTS 430

Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSA 407
            KI   I++   M+ +    +  TY +++   C   RL  A
Sbjct: 431 KKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKA 471



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 223/490 (45%), Gaps = 44/490 (8%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           +N+ VC      +CK  ++ + E +++   +L + PD  +Y  L+D YC+       + +
Sbjct: 205 MNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNV 264

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
            ++M   GI P VVTYN+L+ G  R      +L L   ML+ G+ P+   Y +L+  LF+
Sbjct: 265 CDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFK 324

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +G    A  ++ D++   +      FN M+NGLCK    D A   F+ +++ G  P+ +T
Sbjct: 325 MGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L  G CK G +  A  I +++      P+   Y +++   F ++K    +++L+ M 
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G + +   Y  +IA +   GRL +A     +M+  G   +++  + +++   + G+++
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRID 504

Query: 305 AAYLLLDEM------------------EKQGFECDKYTHT-----------------ILI 329
            A +LL +M                  + +  +C K   T                 I +
Sbjct: 505 EANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAM 564

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 385
            GLCK+G +  AR     ++   F  +   Y  ++      G ++ A N+ + M     V
Sbjct: 565 AGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLV 624

Query: 386 KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            +  TY+++++ LCK+  L  A +L       G+         ++DG   SG  REA  +
Sbjct: 625 PNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDL 684

Query: 446 QSKIRMAKIS 455
           + K+    IS
Sbjct: 685 RGKMLKEGIS 694



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 36/364 (9%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +CK   +E+A  I     +  + P +  YN LI              +L  M   G+SP+
Sbjct: 392 YCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPN 451

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTY +LIAG      L  +     EM+  G  P+V   + ++  L++LG+ DEAN + Q
Sbjct: 452 VVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 511

Query: 137 DMICGDLT-----------------------------------PCTATFNIMLNGLCKNR 161
            M+  DL                                    P    +NI + GLCK+ 
Sbjct: 512 KMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSG 571

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             ++A R F GL    F P+  TY  LI G   AG +  A  +  E+ + G  PN  TY 
Sbjct: 572 KVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYN 631

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++    ++        +   +  KG   +   Y  +I  + K G  +EA D   +M+ +
Sbjct: 632 ALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKE 691

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG- 340
           G+   I++Y++LIN +CK+  +E A  LL+EM+    +    T + L++G  + G++K  
Sbjct: 692 GISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKM 751

Query: 341 ARLH 344
           ++LH
Sbjct: 752 SKLH 755



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 207/511 (40%), Gaps = 76/511 (14%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+     KA  +    +R G+ P VVTYN L+   C+F  +     + + M + G++P+
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPN 311

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V Y +L+ G  +    S +L L D++L  GI   ++++N++++ L ++G+ D A   F+
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNA---------------LRMFRGL-------- 173
            M      P   T+  + +G CK    + A               + M+  L        
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSK 431

Query: 174 ------------QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
                          G  P +VTY  LI G C  GRL  A     E+   G APN I  +
Sbjct: 432 KISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICS 491

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFD------------------------------ 251
            I+   +R  +      +L  M       D                              
Sbjct: 492 KIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIK 551

Query: 252 -----GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                   Y   +A   K G++ +A  +   +       D  +Y TLI+ +   G +  A
Sbjct: 552 FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEA 611

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
           + L DEM  +G   +  T+  L++GLCK+G +  AR   + ++  G   N+  YN ++D 
Sbjct: 612 FNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDG 671

Query: 367 LGKDGKIDHAINVFESMEVKDS-----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
             K G    A+++   M +K+       TYSS+++  CK   +  A KLL     S V  
Sbjct: 672 YCKSGSPREALDLRGKM-LKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQ 730

Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
             +    +V+G    G  ++  K+ + + MA
Sbjct: 731 TIATFSKLVEGCIQHGDVKKMSKLHNMMHMA 761



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 5/354 (1%)

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
           +L + D M + G  P + S NSL+  L + G+   A  V+  M   D+ P   T  IM+N
Sbjct: 15  ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVN 74

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
             CK    + A+   R ++K GF    V+YN L+ G    G +  A+ +LK + + G   
Sbjct: 75  AYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMR 134

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           N +T T ++K   +  K +   ++L  M+++ G   D + Y  +I  + K+G++ +A   
Sbjct: 135 NKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRV 194

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            ++M+  G+++++   N+LIN YCK G++     LL  M K   + D Y++  L+DG C+
Sbjct: 195 RDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCR 254

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFT 390
            G    A    + M + G +  +  YN ++  L + G    A+ ++  M       +   
Sbjct: 255 DGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVG 314

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
           Y +++  L K      A  L    L  G+     A   +++GL   G    AK+
Sbjct: 315 YCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKE 368



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 172/401 (42%), Gaps = 40/401 (9%)

Query: 47  MLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEM 106
           M++  Y +         + + M + G  P + + NSL++   +      ++ + D+M  +
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 107 GIPPDVW-----------------------------------SYNSLMHCLFQLGKPDEA 131
            I PDV+                                   SYNSL+     LG  + A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIK 190
             V + M    +     T  +++ G CK    + A ++ R ++K  G V +   Y  LI 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G CK G++  A  +  E+   G   N     +++    +N +   G  +L  M++     
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D + YCT++  + + G   +A +  +QM+  G++  +V+YNTL+   C+ G  + A  L 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
             M ++G   ++  +  L+DGL K G+   A    + +   G + ++ A+N +++ L K 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 371 GKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSA 407
           G++D A   F+ ME      D  TY ++    CK   +  A
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 146/317 (46%), Gaps = 5/317 (1%)

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G    A  VF +M      P   + N +L+ L K   + +A+ ++  +++   VP++ T 
Sbjct: 10  GMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTC 69

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
            I++   CKAG++  A   ++E+   G   NA++Y +++         +    +L  M  
Sbjct: 70  AIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSE 129

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLE 304
           KG   +      +I  + K  +++EA   + +M   DGV +D  +Y  LI+ YCK GK+ 
Sbjct: 130 KGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMG 189

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  + DEM K G + + +    LI+G CK G +      L  M K+    +  +Y  +V
Sbjct: 190 DAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLV 249

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
           D   +DG    A NV + M  K       TY++++  LC+      A +L    L+ GV 
Sbjct: 250 DGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVT 309

Query: 421 ILKSAQKAVVDGLRHSG 437
             +     ++DGL   G
Sbjct: 310 PNEVGYCTLLDGLFKMG 326



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 5/286 (1%)

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
           NAL +F  + K+G  P L + N L+  L K G   +A  +  ++      P+  T   ++
Sbjct: 14  NALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMV 73

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
               +  K +  +E +  M++ G+  +   Y +++  +V +G ++ A   ++ M   GV 
Sbjct: 74  NAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVM 133

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILIDGLCKAGNIKGARL 343
            + V+   LI  YCK+ K+E A  +L EMEK+ G   D+Y +  LIDG CK G +  A  
Sbjct: 134 RNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIR 193

Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 399
             + M K+G   NL   N +++   K+G++     +   M       DS++Y ++V   C
Sbjct: 194 VRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYC 253

Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
           +      A  +    L+ G+         ++ GL   G  ++A ++
Sbjct: 254 RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRL 299



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 5/261 (1%)

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +++K   + G ++ A  +   +G  G  P+  +  +++    +  +    + +   M+R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
               D F    ++ A+ K G+++ A +++ +M   G +L+ VSYN+L++ Y   G +E A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK-IGFDSNLEAYNCIVD 365
             +L  M ++G   +K T T+LI G CK   ++ A   L  M K  G   +  AY  ++D
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 366 RLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K GK+  AI V + M       + F  +S+++  CK  ++    +LL+   K  ++ 
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 422 LKSAQKAVVDGLRHSGCRREA 442
              +   +VDG    G   +A
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKA 261


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 180/346 (52%), Gaps = 5/346 (1%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ PD+V YN LI   C F  +    T+L  M   GI P+V T+N L+    ++ ++S +
Sbjct: 242 GIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRA 301

Query: 97  LDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
             ++  M+ +G+ PDV +YNS++  HCL  L +  +A +VF+ MI     P   T++ ++
Sbjct: 302 KTIMGFMVHVGVEPDVVTYNSVISGHCL--LSQMGDAVKVFELMIHKGFLPNLVTYSSLI 359

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +G CK +  + AL +   +   G  P++VT++ LI G CKAG+   A+ +   + +    
Sbjct: 360 HGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQH 419

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           PN  T   I+   F+ + +   + +   M++     +   Y  V+      G+L +A + 
Sbjct: 420 PNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQEL 479

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
              + + G+++D+V+Y T+I   CKEG L+ A  LL +ME+ G   +++T+ + + GL +
Sbjct: 480 FSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQ 539

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
             +I  +  +L  M   G  ++      ++     + K + A++VF
Sbjct: 540 RYDISRSTKYLLLMKGKGLSADATTTELLISYFSAN-KENSALHVF 584



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 203/423 (47%), Gaps = 11/423 (2%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
           LG+ PDV T  ++I+  C       G+++L  M + G+ P VVT+ +LI G      ++ 
Sbjct: 100 LGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVAR 159

Query: 96  SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG---DLTPCTATFNI 152
           +    D + +MG   + ++Y ++++ L + G    A  ++ + I G   DL    A ++ 
Sbjct: 160 AARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGA-ILYLEKIKGRNCDLDVVIA-YST 217

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +++ LCK+     AL +F G+   G  P+LV YN LI GLC  GR + A  +L  +   G
Sbjct: 218 IMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKG 277

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             PN  T+  ++    ++        I+  M   G   D   Y +VI+    + ++ +A 
Sbjct: 278 IMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAV 337

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
              E M+  G   ++V+Y++LI+ +CK   +  A  LL EM   G   D  T + LI G 
Sbjct: 338 KVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGF 397

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CKAG  + A+     M++     NL+    I+D L K      AI++F  ME      + 
Sbjct: 398 CKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNV 457

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKS-GVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
             Y+ ++  +C   +L  A + L SCL S G++I   A   ++ GL   G   +A+ +  
Sbjct: 458 VIYNIVLDGMCSFGKLNDAQE-LFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLM 516

Query: 448 KIR 450
           K+ 
Sbjct: 517 KME 519



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 151/307 (49%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           + +  N+ V  FCK   + +A+ I+   + +GV PDVVTYN +I  +C          + 
Sbjct: 281 NVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVF 340

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M   G  P++VTY+SLI G  +   ++ +L LL EM+  G+ PDV ++++L+    + 
Sbjct: 341 ELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKA 400

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           GKP+ A  +F  M   D  P   T  I+L+GL K ++   A+ +FR ++K      +V Y
Sbjct: 401 GKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIY 460

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           NI++ G+C  G+L  A+ +   L   G   + + YTT++K   +         +L  M+ 
Sbjct: 461 NIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEE 520

Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
            G   + F Y   +   ++   +  +T Y+  M   G+  D  +   LI+ +    +  A
Sbjct: 521 NGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKENSA 580

Query: 306 AYLLLDE 312
            ++ L E
Sbjct: 581 LHVFLQE 587



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 177/383 (46%), Gaps = 7/383 (1%)

Query: 36  LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV-TYNSLIAGATRNSLLS 94
           +G   +  TY  +I+  C+          L +++      DVV  Y++++    ++ ++ 
Sbjct: 170 MGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVC 229

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +L+L   M   GI PD+ +YNSL+H L   G+  EA  +  +M+   + P   TFN+++
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLV 289

Query: 155 NGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
           +  CK+     A +   G   H G  P++VTYN +I G C   ++  A  + + +   G 
Sbjct: 290 DNFCKDGMISRA-KTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGF 348

Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
            PN +TY++++    + +     L +L  M   G   D   + T+I  F K G+ + A +
Sbjct: 349 LPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKE 408

Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
               M       ++ +   +++   K      A  L  EMEK   E +   + I++DG+C
Sbjct: 409 LFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMC 468

Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSF 389
             G +  A+     +   G   ++ AY  ++  L K+G +D A N+   ME    + + F
Sbjct: 469 SFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEF 528

Query: 390 TYSSMVHNLCKAKRLPSASKLLL 412
           TY+  V  L +   +  ++K LL
Sbjct: 529 TYNVFVRGLLQRYDISRSTKYLL 551



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 6/370 (1%)

Query: 48  LIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG 107
            +D+     S +A  +  ++M      P    +  L     +    + ++ L+  +  +G
Sbjct: 42  FLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLG 101

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           I PDV++   +++CL  L        V   M    + P   TF  ++NGLC       A 
Sbjct: 102 IKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAA 161

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKC 226
           R    L+  G      TY  +I GLCKAG    A   L+++ G +      I Y+TIM  
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS 221

Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
             ++      L + S M  KG   D   Y ++I      GR KEAT  +  M+  G+  +
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281

Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
           + ++N L++ +CK+G +  A  ++  M   G E D  T+  +I G C    +  A    E
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE 341

Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 402
            M   GF  NL  Y+ ++    K   I+ A+ +   M       D  T+S+++   CKA 
Sbjct: 342 LMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAG 401

Query: 403 RLPSASKLLL 412
           + P A+K L 
Sbjct: 402 K-PEAAKELF 410



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 5/236 (2%)

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P    +T +     + + Y   + ++  +   G   D +    +I     +         
Sbjct: 69  PREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSV 128

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
           +  M   GV   +V++ TLIN  C EG +  A    D +E  G + + YT+  +I+GLCK
Sbjct: 129 LGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCK 188

Query: 335 AGNIKGARLHLEYMNKIGFDSNLE-AYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
           AG+  GA L+LE +     D ++  AY+ I+D L KDG +  A+N+F  M  K    D  
Sbjct: 189 AGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLV 248

Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            Y+S++H LC   R   A+ LL + ++ G+         +VD     G    AK I
Sbjct: 249 AYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTI 304



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 121/357 (33%), Gaps = 75/357 (21%)

Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
           + AL  F  +     +P    +  L   + K     T   ++K +   G  P+  T T I
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
           + C         G  +L  M + G       + T+I      G +  A  + + +   G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDE------------------------------- 312
           Q +  +Y  +IN  CK G    A L L++                               
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 313 -----MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
                M  +G + D   +  LI GLC  G  K A   L  M + G   N++ +N +VD  
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 368 GKDGKIDH-----------------------------------AINVFESMEVK----DS 388
            KDG I                                     A+ VFE M  K    + 
Sbjct: 293 CKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNL 352

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            TYSS++H  CK K +  A  LL   + SG+         ++ G   +G    AK++
Sbjct: 353 VTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKEL 409


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 209/486 (43%), Gaps = 88/486 (18%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           G +   +L+I V TF K   ++KA  +I     LG+  +  T+ +LI  + +    D   
Sbjct: 264 GWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKAL 323

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS-------- 114
            +  +M+++G +PDV  Y++LI G      +  +L LL EM E+GI PD+          
Sbjct: 324 QLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYC 383

Query: 115 -------------------------YNSLMHCLFQLGKPDEANRVFQDMICGDLT----- 144
                                    YNS+++ L      D+A  + + M   + T     
Sbjct: 384 SEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEV 443

Query: 145 -----------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
                      P T +F+I+++GLC     D AL +FR + + G    ++ YN LI  L 
Sbjct: 444 NKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLS 503

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI-------------- 239
            + RL     +LKE+  SG  P   T+ +I  C  R       L++              
Sbjct: 504 NSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIK 563

Query: 240 ---------------------LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
                                L+ M R+G+  D   Y   I  FVKI  + +A +    +
Sbjct: 564 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 623

Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
              G   D+V+YNTLIN +CK  ++  A+ +LDEM  +G      T+ +LIDG CK G+I
Sbjct: 624 CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI 683

Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
             A   L  M     + N+  Y  ++D L   G+ D AI+++  M  K    +  ++ ++
Sbjct: 684 DQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIAL 743

Query: 395 VHNLCK 400
           +H LCK
Sbjct: 744 IHGLCK 749



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 164/354 (46%), Gaps = 3/354 (0%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           M +  + PD  +++ +I G      L  +L L  +M+ +G   +V  YN+L+  L    +
Sbjct: 448 MVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 507

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            +E   + ++M      P   T N +   LC+      AL M R ++ HG  P +  Y +
Sbjct: 508 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 567

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           L+K LCK  R   A   L E+   G  P+ + Y+  +    + +     LEI   +  +G
Sbjct: 568 LVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARG 627

Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
           Y  D   Y T+I  F K+ R+ EA D +++MV  G+   +V+YN LI+ +CK G ++ A+
Sbjct: 628 YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAF 687

Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
             L  M  +  E +  T+T LIDGLC AG    A      M   G   N  ++  ++  L
Sbjct: 688 HCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 747

Query: 368 GKDGKIDHAINVFESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
            K G  D A+  F  M   E  D+  Y +++ +    K    A ++L   +  G
Sbjct: 748 CKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKG 801



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 35/344 (10%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   +I +   C   +L+ A ++  D +R+G   +V+ YN LID        +  Y +L 
Sbjct: 457 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 516

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M+ +G  P   T+NS+     R   ++ +LD++ EM   G  P +  Y  L+  L +  
Sbjct: 517 EMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 576

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           +  EA     +M+     P    ++  ++G  K +  D AL +FR +   G+ P++V YN
Sbjct: 577 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 636

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK  R+  A  IL E+   G  P+ +TY  ++                      
Sbjct: 637 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID--------------------- 675

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
                  G+C       K G + +A   + +MV    + ++++Y TLI+  C  G+ + A
Sbjct: 676 -------GWC-------KNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDA 721

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
             L +EM  +G   ++ +   LI GLCK G    A L+   M +
Sbjct: 722 IHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGE 765



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           V   CK  R  +A   + + +R G LPD+V Y+  ID + +  + D    I   +   G 
Sbjct: 569 VKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGY 628

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDVV YN+LI G  +   +S + D+LDEM+  G+ P V +YN L+    + G  D+A  
Sbjct: 629 CPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFH 688

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
               M+  +  P   T+  +++GLC     D+A+ ++  ++  G  P  +++  LI GLC
Sbjct: 689 CLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC 748

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
           K G    A    +E+G+    P+ I Y  ++     N+   L  EIL  M  KG
Sbjct: 749 KCGWPDAALLYFREMGER-ETPDTIVYVALITSFISNKNPTLAFEILKEMVAKG 801



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 186/457 (40%), Gaps = 60/457 (13%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G  PD  T   ++ AYC    FD   ++ N +   G   D    + L+   ++   +  +
Sbjct: 229 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTFSKCGEVDKA 287

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            +L++ M ++GI  +  ++  L+H   +  + D+A ++F+ M      P  + ++ ++ G
Sbjct: 288 FELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGG 347

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC  +  + AL +   +++ G  P++   + LI   C +  +   R I + L D      
Sbjct: 348 LCAKKEIEKALHLLSEMKELGIDPDIQILSKLI-AYC-SEEVDIYRLIEERLEDLDTEAM 405

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF-----------------GYCTVI 259
            + Y +++      +       +L AM    YT D F                  +  VI
Sbjct: 406 LLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYT-DNFEVNKFFMVKEMVRPDTTSFSIVI 464

Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
                 G+L  A      MV  G + +++ YN LI+      +LE  YLLL EM+  GF 
Sbjct: 465 DGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFR 524

Query: 320 CDKYTHTILIDGLCKAGNIKGA-------RLH---------------------------- 344
             ++TH  +   LC+  ++ GA       R+H                            
Sbjct: 525 PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNF 584

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
           L  M + GF  ++ AY+  +D   K   +D A+ +F  +  +    D   Y+++++  CK
Sbjct: 585 LAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCK 644

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            KR+  A  +L   +  G+         ++DG   +G
Sbjct: 645 VKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNG 681



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 187/421 (44%), Gaps = 66/421 (15%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMR-EAGISPDVVTYNSL---IAGATRNSLLSC-S 96
           ++T+ ++ +      S+   Y   N    + G + +  TYN++   ++ A +N+ LS  S
Sbjct: 92  MLTHEVVENVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLS 151

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
           +D+++    M   P    +   + CL   G  +EAN +F                + +  
Sbjct: 152 MDIVNSRCAMS--PGALGF--FIRCLGSTGLVEEANLLFD--------------QVKMMR 193

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC                    VP   ++N L++ + K+G +      LKE+ DSG  P+
Sbjct: 194 LC--------------------VPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPD 233

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
             T T++++    +RK+   L + + +  +G+  DG     ++  F K G + +A + +E
Sbjct: 234 KYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTFSKCGEVDKAFELIE 292

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
           +M   G++L+  ++  LI+ + ++ +++ A  L  +M+K GF  D   +  LI GLC   
Sbjct: 293 RMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKK 352

Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
            I+ A   L  M ++G D +++  + ++    ++  I   I   E +E  D+      Y+
Sbjct: 353 EIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIE--ERLEDLDTEAMLLLYN 410

Query: 393 SMVHNLCKAKRLPSASKLLLS----------------CLKSGVRILKSAQKAVVDGLRHS 436
           S+++ L   K +  A  LL +                 +K  VR   ++   V+DGL ++
Sbjct: 411 SVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNT 470

Query: 437 G 437
           G
Sbjct: 471 G 471


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 178/360 (49%), Gaps = 4/360 (1%)

Query: 42  VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
           +VTYN LI AYC+    +  + I+N M + G+ P + TYN++I G  +    + +  +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           EML +G+ PD  +YN+L+    +     EA  +F +M+   + P   +F+ ++    +NR
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
           + D AL  FR ++K G VP+ V Y +L+ G C+ G +  A  I  E+ + G   + I Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
           TI+    + +      ++   M  +G   D + + T+I    + G + +A      M   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
            ++ DIV+YNTLI+ +CK G++E A  L D M  +    +  T+ ILI+  C  G++  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 342 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 397
               + M + G    L   N ++    + G    A      M  K    D  +Y++++++
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 181/362 (50%), Gaps = 4/362 (1%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C+   LE+A  I+      G+ P + TYN +I+  C+   +     IL  M  
Sbjct: 5   NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 64

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            G+SPD  TYN+L+  + R    S + ++  EML  G+ PD+ S++SLM    +    D+
Sbjct: 65  IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A   F+DM    L P    + ++++G C+N     AL++   + + G V +++ YN ++ 
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 184

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLCK   L  A  +  E+ + G  P+  T+TT++    ++      L +   M ++    
Sbjct: 185 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 244

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
           D   Y T+I  F K+G +++A++  + M++  +  + ++Y  LIN YC  G +  A+ L 
Sbjct: 245 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 304

Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
           D M ++G +    T   +I G C++G+   A   L  M   G   +  +YN +++    D
Sbjct: 305 DVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN----D 360

Query: 371 GK 372
           GK
Sbjct: 361 GK 362



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 4/340 (1%)

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
           +YN+L+    + G  +EA  +   M    L P   T+N ++NGLCK      A  +   +
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
              G  P+  TYN L+   C+      A+ I  E+   G  P+ ++++++M    RNR  
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
              L     MK+ G   D   Y  ++  + + G + EA    ++M+  G  LD+++YNT+
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           +N  CKE  L  A  L DEM ++G   D YT T LI G C+ GN+  A      M +   
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASK 409
             ++ AYN ++D   K G+++ A  +++ M  +  F    TY  +++  C    +  A +
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           L    ++ G++        V+ G   SG   +A +   ++
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 342



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 140/289 (48%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T   N  +   C+ +   +A+ I  + +R GV+PD+V+++ L+  + +    D       
Sbjct: 71  TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFR 130

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            M++ G+ PD V Y  L+ G  RN  +  +L + DEMLE G   DV +YN++++ L +  
Sbjct: 131 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 190

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              +A+++F +M+     P   TF  +++G C++     AL +F  + +    P++V YN
Sbjct: 191 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 250

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI G CK G +  A  +   +      PN ITY  ++              +   M  K
Sbjct: 251 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK 310

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
           G         TVI  + + G   +A +++ +M+  GV  D +SYNTLIN
Sbjct: 311 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 171/365 (46%), Gaps = 5/365 (1%)

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           +VTYN+LI    R  LL  + ++++ M + G+ P +++YN++++ L + G+   A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   L+P T T+N +L   C+      A  +F  + + G VP+LV+++ L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
            L  A    +++   G  P+ + YT +M    RN      L+I   M  +G   D   Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
           T++    K   L +A    ++MV  G   D  ++ TLI+ +C++G +  A  L   M ++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             + D   +  LIDG CK G ++ A    + M       N   Y  +++     G +  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 377 INVFESM---EVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV-D 431
             +++ M    +K +  T ++++   C++     A + L   +  GV     +   ++ D
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360

Query: 432 GLRHS 436
           G R S
Sbjct: 361 GKRRS 365



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 142/311 (45%), Gaps = 39/311 (12%)

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N ++   C+    + A  +   +   G  P L TYN +I GLCK GR   A+ IL E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           + + G +P+  TY T++               + + +R  ++                  
Sbjct: 62  MLNIGLSPDTTTYNTLL---------------VESCRRDNFS------------------ 88

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
             EA +   +M+  GV  D+VS+++L+ ++ +   L+ A +   +M+K G   D   +T+
Sbjct: 89  --EAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 146

Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 383
           L+ G C+ GN+  A    + M + G   ++ AYN I++ L K+  +  A  +F+ M    
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206

Query: 384 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
            + D +T+++++H  C+   +  A  L  +  +  ++    A   ++DG    G   +A 
Sbjct: 207 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 266

Query: 444 KIQSKIRMAKI 454
           ++   +   KI
Sbjct: 267 ELWDGMISRKI 277



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 39/81 (48%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
           I +  +C    + +A  +    I  G+ P +VT N +I  YC+          L RM   
Sbjct: 286 ILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 345

Query: 72  GISPDVVTYNSLIAGATRNSL 92
           G++PD ++YN+LI    R S+
Sbjct: 346 GVAPDHISYNTLINDGKRRSV 366


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 232/492 (47%), Gaps = 58/492 (11%)

Query: 11  NICVCTFCKANRLEKAEAI---IIDGIR-----LGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           NI V  FC+   ++  E +   +ID +        + P++VTY  LI AYC+        
Sbjct: 117 NILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEAL 176

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD----------- 111
           ++   M   G  PDVVTY+S+I G  +  +L+ +  LL EM +MG+ P+           
Sbjct: 177 SLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSL 236

Query: 112 -----VWS---YNS----------------LMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
                 W    Y S                L+  LF+ GK DEA  +F  +   +  P  
Sbjct: 237 FKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNN 296

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+  M++G CK    D A  + R ++K   VP +VTY+ +I G  K G L  A  I+K+
Sbjct: 297 ITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV---K 264
           + D    PNA  Y T++    +  K    +++ + MK  G   + F    ++ AF+   K
Sbjct: 357 MLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSF----IVDAFINNLK 412

Query: 265 IGR-LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
            GR ++EA    + M++ G+ LD V+Y +L++ + K G+  AA+ + ++M + G + D  
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVV 472

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
            + +LI+GL + G      ++   + ++G   +   YN +++   K GK+++AI ++  M
Sbjct: 473 AYNVLINGLLRLGKYDAESVY-SGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEM 531

Query: 384 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
           +    + +S T + +V  L KA     A  +L   L  G+    +  +A+++    S C 
Sbjct: 532 KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNAC--SKCE 589

Query: 440 REAKKIQSKIRM 451
           R    +Q   R+
Sbjct: 590 RADTILQMHKRL 601



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 200/429 (46%), Gaps = 17/429 (3%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GVLP+V T+N+L+ A+C+          L+ +R   I  D VTYN+ I G  +  L +  
Sbjct: 41  GVLPNVFTHNILVHAWCKMGHLSLA---LDLIRNVDIDVDTVTYNTAIWGFCQQGLANQG 97

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------CGDLTPCTA 148
              L  M++     D ++ N L+    ++G       V  ++I          +L P   
Sbjct: 98  FGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLV 157

Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
           T+  +++  CK      AL ++  +   GF+P++VTY+ +I GLCK G L  A+ +L+E+
Sbjct: 158 TYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREM 217

Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
              G  PN + Y  ++   F+           S M   G +FD     T+I    K G+ 
Sbjct: 218 DKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKS 277

Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
            EA      +       + ++Y  +I+ YCK G ++ A  LL +MEK+    +  T++ +
Sbjct: 278 DEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSI 337

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 385
           I+G  K G +  A   ++ M       N   Y  ++D   K GK D A++++  M++   
Sbjct: 338 INGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGL 397

Query: 386 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
            ++SF   + ++NL + +++  A  L    +  G+ + +    +++DG   +G  RE+  
Sbjct: 398 EENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTG--RESAA 455

Query: 445 IQSKIRMAK 453
                +MA+
Sbjct: 456 FTMAEKMAE 464



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 193/419 (46%), Gaps = 10/419 (2%)

Query: 10  LNICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
            ++ VCT       KA + ++AEA+     +L  +P+ +TY  +ID YC+    D   ++
Sbjct: 259 FDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESL 318

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  M +  + P+VVTY+S+I G T+  +L  ++ ++ +ML+  I P+ + Y +L+    +
Sbjct: 319 LRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLK 378

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
            GK D A  ++ +M    L   +   +  +N L + R  + A  + + +   G + + V 
Sbjct: 379 AGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVN 438

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  L+ G  K GR   A  + +++ ++G   + + Y  ++    R  KY     + S ++
Sbjct: 439 YTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIR 497

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y T+I A+ K G+L+ A     +M    V  + ++ N L+    K G+ E
Sbjct: 498 ELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETE 557

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L+EM   G   +   H  L++   K           + +  +G  +N E YN ++
Sbjct: 558 RAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLI 617

Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             L   G    A  V  +M  +    D+ TY++++H   K+  +  A       L  GV
Sbjct: 618 TVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGV 676



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 197/481 (40%), Gaps = 77/481 (16%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP- 75
           + K   L+ A  I+   +   ++P+   Y  LID + +    DA   + N M+  G+   
Sbjct: 341 YTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEEN 400

Query: 76  ----------------------------------DVVTYNSLIAGATRNSLLSCSLDLLD 101
                                             D V Y SL+ G  +    S +  + +
Sbjct: 401 SFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAE 460

Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
           +M E GI  DV +YN L++ L +LGK D A  V+  +    L P  AT+N M+N  CK  
Sbjct: 461 KMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQG 519

Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
             +NA++++  ++ H  +P  +T NIL+ GL KAG    A  +L E+   G  PN   + 
Sbjct: 520 KLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHR 579

Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
            ++  C +  +    L++   +   G   +   Y ++I     +G  K AT  +  M  +
Sbjct: 580 ALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKE 639

Query: 282 GVQLDIVSYNTLINLYCKEGKLE-----------------------------------AA 306
           G+  D V+YN LI+ + K   +E                                    A
Sbjct: 640 GISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKA 699

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVD 365
           Y +L +M+  G + D   +  LI G  K GN K A + + E + K G       YN +++
Sbjct: 700 YEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTK-GLVPKTSTYNVLIE 758

Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
              K GK+D A  +   M+V+    +S TY  ++   C   + P   ++     ++  R 
Sbjct: 759 DFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEART 818

Query: 422 L 422
           L
Sbjct: 819 L 819



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 173/394 (43%), Gaps = 50/394 (12%)

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           +R   I P +  +N LI       L+S   DL  EML  G+ P+V+++N L+H   ++G 
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
              A  + +++   D+   T T+N  + G C+    +        + K     +  T NI
Sbjct: 62  LSLALDLIRNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNI 118

Query: 188 LIKGLCKAGRLRTARWILKEL--------GDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
           L+KG C+ G ++   W++  L        G +   PN +TYTT+                
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTL---------------- 162

Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
                              I+A+ K   L EA    E+M++DG   D+V+Y+++IN  CK
Sbjct: 163 -------------------ISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCK 203

Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
            G L  A  LL EM+K G   +   + IL+D L KAG+   + ++   M   G   +L  
Sbjct: 204 RGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVV 263

Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
              ++D L K GK D A  +F ++     + ++ TY++M+   CK   +  A  LL    
Sbjct: 264 CTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDME 323

Query: 416 KSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           K  V        ++++G    G    A +I  K+
Sbjct: 324 KKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKM 357



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 206/487 (42%), Gaps = 96/487 (19%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
           NI V  +CK   L    ++ +D IR + +  D VTYN  I  +CQ    + G+  L+ M 
Sbjct: 50  NILVHAWCKMGHL----SLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMV 105

Query: 70  E-------------------------------------------AGISPDVVTYNSLIAG 86
           +                                             + P++VTY +LI+ 
Sbjct: 106 KKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISA 165

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM-------- 138
             +   LS +L L +EM+  G  PDV +Y+S+++ L + G   EA  + ++M        
Sbjct: 166 YCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPN 225

Query: 139 ----------------------------ICG---DLTPCTATFNIMLNGLCKNRYTDNAL 167
                                       +CG   DL  CT     +++GL K   +D A 
Sbjct: 226 HVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTT----LIDGLFKAGKSDEAE 281

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            MF  L K   +P  +TY  +I G CK G +  A  +L+++      PN +TY++I+   
Sbjct: 282 AMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGY 341

Query: 228 FRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDI 287
            +     + + I+  M  +    + + Y T+I   +K G+   A D   +M  +G++ + 
Sbjct: 342 TKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENS 401

Query: 288 VSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
              +  IN   +  K+E A  L   M  +G   D+  +T L+DG  K G    A    E 
Sbjct: 402 FIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEK 461

Query: 348 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
           M + G   ++ AYN +++ L + GK D A +V+  +       D  TY++M++  CK  +
Sbjct: 462 MAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGK 520

Query: 404 LPSASKL 410
           L +A KL
Sbjct: 521 LENAIKL 527



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 171/414 (41%), Gaps = 48/414 (11%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           F K  R   A  +       G+  DVV YN+LI+   +   +DA  ++ + +RE G++PD
Sbjct: 446 FFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAE-SVYSGIRELGLAPD 504

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
             TYN++I    +   L  ++ L +EM    + P+  + N L+  L + G+ + A  V  
Sbjct: 505 RATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLN 564

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M+   + P       +LN   K    D  L+M + L   G       YN LI  LC  G
Sbjct: 565 EMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLG 624

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL------------------- 237
             + A  +L  +   G + + +TY  ++   F++   +  L                   
Sbjct: 625 MTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYN 684

Query: 238 ----------------EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
                           EILS MK  G   D   Y T+I+   KIG  KEA  +  +MVT 
Sbjct: 685 LLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTK 744

Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-------- 333
           G+     +YN LI  + K GK++ A  LL+EM+ +    +  T+ ILI G C        
Sbjct: 745 GLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPEL 804

Query: 334 ----KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
               K      AR     MN+ GF        CI     + G +  A ++ + M
Sbjct: 805 DRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDM 858



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 12/224 (5%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           K +  + N  +   C     ++A  ++ +  + G+  D VTYN LI  + +    +    
Sbjct: 607 KANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALA 666

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
              +M   G+SP + TYN L+ G     L+S + ++L +M + G+ PD   YN+L+    
Sbjct: 667 TYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHG 726

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           ++G   EA + + +M+   L P T+T+N+++    K    D A  +   +Q     P   
Sbjct: 727 KIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSS 786

Query: 184 TYNILIKGLCKAGR-----------LRT-ARWILKELGDSGHAP 215
           TY+ILI G C   +            RT AR +  E+ + G  P
Sbjct: 787 TYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
           ++ S M   G   + F +  ++ A+ K+G L  A D +  +  D   +D V+YNT I  +
Sbjct: 32  DLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVDID---VDTVTYNTAIWGF 88

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--------N 349
           C++G     +  L  M K+    D +T  IL+ G C+ G++K     ++ +         
Sbjct: 89  CQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDG 148

Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRL 404
               + NL  Y  ++    K   +  A++++E M + D F     TYSS+++ LCK   L
Sbjct: 149 TTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEM-ISDGFLPDVVTYSSIINGLCKRGML 207

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
             A  LL    K GV         +VD L  +G   E+   QS++ +  +S
Sbjct: 208 TEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVS 258


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 10/374 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSC 95
           V PDVVTY +L++  C+         +L+ M  ++  I PDVVT N+++ G  ++  +  
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 96  SLDLLDEMLEM--GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           +L  +++ +    G PP+  +YN L+    ++G    A  + + M    +     T N +
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPE----LVTYNILIKGLCKAGRLRTARWILKELG 209
           + GLC+   T  AL  FR  +K    PE     VTY+ L+  L     +  A  +  E  
Sbjct: 288 VGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             GH+P+AI Y T++    +  + +    + S+MK  G+  D   Y  +IA F +  RL 
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + +++M   G++ D+ +YNTL++  CK G   A   LL +M   G +    T   L+
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
            G CK G I  A   L  M++ G   N   YN ++D L K G +D AI +F+ M+ K   
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525

Query: 390 TYSSMVHNLCKAKR 403
              +  + L K  R
Sbjct: 526 ANVTTFNALLKGLR 539



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 13/422 (3%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           DV  +N ++ A  +         I   M+  A + PDVVTY  L+ G  +   +  +L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 100 LDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLN 155
           LD M   ++ I PDV + N+++  L + G+  EA    +  +       P T T+N +++
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE---LGDSG 212
             C+      A  +   ++  G    +VT N ++ GLC+AGR   A    +E   +   G
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              NA+TY+T++          + +E+      +G++ D   Y T+I+   + GRL++A 
Sbjct: 315 KG-NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                M   G +LD  +YN LI  +C++ +L  AY LL EM++ G   D  T+  L+ G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDS 388
           CKAG+       L  M   G   ++  +  +V    K GKID A+ +  SM+      ++
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             Y++++  LCK   +  A +L     +  V    +   A++ GLR      +A ++  +
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 449 IR 450
           +R
Sbjct: 554 MR 555



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 179/385 (46%), Gaps = 8/385 (2%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NR 67
           I V   CKA R+  A   ++DG+    L + PDVVT N ++D  C+          +  R
Sbjct: 177 ILVNGLCKAGRVGDA-LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQR 235

Query: 68  MREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M    G  P+ VTYN LI    R   +S + +L+++M   G+P ++ + N+++  L + G
Sbjct: 236 MSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295

Query: 127 KPDEANRVFQD--MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +   A   F++   +  +      T++ ++  L        A+ +F      G  P+ + 
Sbjct: 296 RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM 355

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I GL +AGRL  A  +   + ++G   +   Y  ++    R ++     E+L  MK
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y T+++   K G      + + +M+ DG Q  ++++ TL++ YCK GK++
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L  M++ G   +   +  LID LCK G++  A    + M +    +N+  +N ++
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535

Query: 365 DRLGKDGKIDHAINVFESMEVKDSF 389
             L      + A  + + M  +  F
Sbjct: 536 KGLRDKNMPEKAFELMDQMREERCF 560



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 74/362 (20%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRL--GVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           LN  V   CK+ R+++A A +   +    G  P+ VTYN LIDA+C+  +    Y ++ +
Sbjct: 212 LNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEK 271

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLD----------------------------- 98
           M   G+  ++VT N+++ G  R      +L+                             
Sbjct: 272 MENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHT 331

Query: 99  --------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
                   L  E +  G  PD   Y +++  L Q G+ ++A  +   M        T  +
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           NI++ G C+ +    A  + + +++ G  P++ TYN L+ G CKAG       +L ++ D
Sbjct: 392 NILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID 451

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ IT+ T++                             GYC       K+G++ E
Sbjct: 452 DGCQPSVITFGTLV----------------------------HGYC-------KVGKIDE 476

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  M   G+  + V YNTLI+  CK G ++ A  L DEM+++    +  T   L+ 
Sbjct: 477 ALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLK 536

Query: 331 GL 332
           GL
Sbjct: 537 GL 538



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 108/212 (50%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +    +A RLE A ++       G   D   YN+LI  +C+       Y +L  M+E GI
Sbjct: 360 ISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI 419

Query: 74  SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
            PDV TYN+L++G+ +    +   +LL +M++ G  P V ++ +L+H   ++GK DEA R
Sbjct: 420 RPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALR 479

Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
           + + M    + P    +N +++ LCK    D A+ +F  +++      + T+N L+KGL 
Sbjct: 480 ILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLR 539

Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
                  A  ++ ++ +    P+ +T   +M+
Sbjct: 540 DKNMPEKAFELMDQMREERCFPDYVTVDVLME 571



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 97/189 (51%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
           KL T+  NI +  FC+  RL +A  ++ +   +G+ PDV TYN L+   C+   F A   
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 64  ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
           +L +M + G  P V+T+ +L+ G  +   +  +L +L  M E GI P+   YN+L+  L 
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
           + G  D A  +F +M    +     TFN +L GL      + A  +   +++    P+ V
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYV 564

Query: 184 TYNILIKGL 192
           T ++L++ L
Sbjct: 565 TVDVLMEWL 573


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 189/430 (43%), Gaps = 50/430 (11%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           ST   N+ +    +  R + A  ++   +  GV PDV TY  LI   C+         + 
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           ++M+EAG+ P +VTY+SL+ G      +  +L L  EM + G PP+  +Y +LM    + 
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 126 GKPDEANRVFQDM-----ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              D A  +  +M      CGD T     +NI++NGL           M +     GFVP
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYT-----YNILINGLYMVNRVCEVDEMLKRFLSEGFVP 533

Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
             +TYN +I G  KAG + +A  + +++   G  PN +TYT+ +    R     L +++L
Sbjct: 534 TTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593

Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN--------- 291
             ++R G   D   Y   I  F K G +  A  ++  ++ DG+  D+  YN         
Sbjct: 594 IYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNL 653

Query: 292 --------------------------TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
                                     TLI+ + K G +  A  L  EM       D  T 
Sbjct: 654 KMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTF 713

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-- 383
           T L  GLC++G+I GA+  L+ M ++    N+  YN +++   +DGK+  A  + + M  
Sbjct: 714 TALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLS 773

Query: 384 --EVKDSFTY 391
              V D  TY
Sbjct: 774 SGVVPDDTTY 783



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 194/402 (48%), Gaps = 7/402 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DVV   ML+  YC          + + +   G++P  VTY  LI G     +   +  L 
Sbjct: 290 DVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLC 349

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M+E G+ P  + +N ++  L +  +  +A  + + ++     P   T+  +++ LCK+
Sbjct: 350 RQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLK-LVVDTGVPDVFTYGCLIHWLCKH 408

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
           +    A+ ++  +++ G  P +VTY+ L+ G C+ GR+  A  +  E+ D G  PN +TY
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY 468

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT+MK   + + +     +L+ M++ G +   + Y  +I     + R+ E  + +++ ++
Sbjct: 469 TTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLS 528

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
           +G     ++YN++IN + K G + +A+ +  +M K+G   +  T+T  IDG C+      
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMV 395
           A   L Y+ + G   ++ AYN  +D   K G +  A++ F  + +KD  T     Y+S V
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALH-FLVLLLKDGLTPDVTVYNSFV 647

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
                 K +  ASK   S +K  V         ++DG    G
Sbjct: 648 TGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVG 689



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 193/461 (41%), Gaps = 48/461 (10%)

Query: 32  DGIRL-------GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLI 84
           D +RL       GV PD   Y + I   C+    D    +L +MREAG  P  +TY+S++
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVV 262

Query: 85  AGATRNSLLSCSLDLLDEML-EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
               +   +  +L L D+ML   G   DV     LMH     G+  +A  +F +++   +
Sbjct: 263 DVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGV 322

Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
           TP   T+ +++ G      TD   ++ R + + G +P    +N++IKGL +  R + A  
Sbjct: 323 TPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIG 382

Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
           +LK + D+G  P+  TY  ++    +++K    + +   MK  G       Y +++  + 
Sbjct: 383 LLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYC 441

Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
           + GR+ EA     +M   G   + V+Y TL+  Y K+   + AY LL+EM + G  C  Y
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501

Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
           T+ ILI+GL     +      L+     GF      YN I++   K G +  A  ++  M
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561

Query: 384 EVK---------------------------------------DSFTYSSMVHNLCKAKRL 404
             K                                       D   Y++ +   CK   +
Sbjct: 562 RKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNM 621

Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
             A   L+  LK G+    +   + V G ++     EA K 
Sbjct: 622 SRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 185/470 (39%), Gaps = 76/470 (16%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           GV+PD  +   L+       S     T+ + MR  G   D   Y+ +I    R  +   +
Sbjct: 145 GVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDA 204

Query: 97  LDLLDEMLEMGIPPD---------------------------------VW--SYNSLMHC 121
           + L DEM   G+ PD                                  W  +Y+S++  
Sbjct: 205 VRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDV 264

Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIML-NGLCKNRYTDNALRMFRGLQKHGFVP 180
           L ++ + DEA R+   M+             ML +G C N     AL +F  +   G  P
Sbjct: 265 LVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTP 324

Query: 181 ELVTYNILIKG------------LCKA------------------GRLRTARW-----IL 205
             VTY +LIKG            LC+                   G LR  RW     +L
Sbjct: 325 TNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL 384

Query: 206 KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 265
           K + D+G  P+  TY  ++    +++K    + +   MK  G       Y +++  + + 
Sbjct: 385 KLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443

Query: 266 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 325
           GR+ EA     +M   G   + V+Y TL+  Y K+   + AY LL+EM + G  C  YT+
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 326 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 385
            ILI+GL     +      L+     GF      YN I++   K G +  A  ++  M  
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 386 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
           K    +  TY+S +   C+      A KLL+   + G++   +A  A +D
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 37/348 (10%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           +C+  R+++A  +  +    G  P+ VTY  L+  Y +  +FD  Y +LN MR+ G+S  
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499

Query: 77  VVTYNSLIAGATRNSLLSCSLD-LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
             TYN LI G    + + C +D +L   L  G  P   +YNS+++   + G    A  ++
Sbjct: 500 DYTYNILINGLYMVNRV-CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMY 558

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           + M    +TP   T+   ++G C+    D A+++   +++ G  P++  YN  I   CK 
Sbjct: 559 RQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQ 618

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G +  A   L  L   G  P+   Y + +      +      +   +M ++    D   Y
Sbjct: 619 GNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIY 678

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLD----------------------------- 286
            T+I  F K+G +  A +   +M+ + V  D                             
Sbjct: 679 TTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR 738

Query: 287 ------IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
                 IV+YN LIN   ++GKL+ A+ L DEM   G   D  T+ IL
Sbjct: 739 LDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 186/460 (40%), Gaps = 76/460 (16%)

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
           +RM   G+ PD  +   L+      +  + +L L DEM   G   D   Y+ ++    + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G   +A R+F +M    + P    + I ++GLCK R  D AL++   +++ GF P  +TY
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 186 N------------------------------------ILIKGLCKAGRLRTARWILKELG 209
           +                                    +L+ G C  G +  A  +  E+ 
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 210 DSGHAPNAITYTTIMKCC-----------------------------------FRNRKYK 234
             G  P  +TY  ++K C                                    R++++K
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
             + +L  +   G   D F Y  +I    K  +L EA +  ++M   GV+  IV+Y++L+
Sbjct: 379 DAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
             YC++G+++ A  L  EM  +GF  ++ T+T L+ G  K      A   L  M + G  
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 355 SNLEAYNCIVDRL---GKDGKIDHAINVFESME-VKDSFTYSSMVHNLCKAKRLPSASKL 410
                YN +++ L    +  ++D  +  F S   V  + TY+S+++   KA  + SA  +
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 411 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
                K G+        + +DG   + C   A K+   +R
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 130/283 (45%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           NI +      NR+ + + ++   +  G +P  +TYN +I+ + +     + + +  +MR+
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
            GI+P++VTY S I G  R +    ++ LL  +   GI PD+ +YN+ +    + G    
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
           A      ++   LTP    +N  + G    +    A + +  + K   V +   Y  LI 
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           G  K G +  A  +  E+  +   P+  T+T +     R+        +L  M+R   + 
Sbjct: 684 GFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSP 743

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           +   Y  +I A V+ G+L+EA    ++M++ GV  D  +Y+ L
Sbjct: 744 NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 171/337 (50%), Gaps = 12/337 (3%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISP 75
            C+  R+ +A A++   +  G+ P+ +TY  ++D  C+     +   +L +M E + I P
Sbjct: 91  LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DVV Y+++I G  ++   + + +L  EM + GI PD+ +Y+ +++     GK  EA R+ 
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           Q+M+   ++P   TF+ ++N L K    ++A  + + +   G  P +VT N L+ GLC +
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 196 GRLRTARWILKELG------DSGHA-----PNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           G+L+ A  + K +       D+ HA     P+  TY  ++       K+    E+   M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
            +G   D   Y ++I    K  RL EAT   + M +     +IV++NTLI  YCK G ++
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
               L  EM ++G   +  T+  LI G  K GNI G+
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 201/413 (48%), Gaps = 20/413 (4%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           D+ ++N+LI  +C         +   ++ + G  P +VT+N+L+ G      +S +LDL 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
            +M +    P+V ++ +LM+ L + G+  EA  +   M+   L P   T+  +++G+CK 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 161 RYTDNALRMFRGLQKHGFV-PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
             T +AL + R +++   + P++V Y+ +I GL K GR   A+ +  E+ D G  P+ +T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
           Y+ ++     + K+     +L  M  +  + D   +  +I A VK G L  A D +++M+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK-----------QGFECDKYTHTIL 328
           + GV  ++V+ NTL++  C  GKL+ A  +   M+K            G E D  T+ IL
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 386
           I GL   G    A    E M   G   +   Y+ +++ L K  ++D A  +F+SM  K  
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 387 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             +  T+++++   CKA  +    +L     + G+         ++ G R  G
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 217/467 (46%), Gaps = 40/467 (8%)

Query: 2   FGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ 54
           FGKL+    +  + TF       C  +R+ +A    +D       P+VVT+  L++  C+
Sbjct: 38  FGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA----LDLFHQMCKPNVVTFTTLMNGLCR 93

Query: 55  FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVW 113
                    +L+RM E G+ P+ +TY +++ G  +      +L+LL +M E+  I PDV 
Sbjct: 94  EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVV 153

Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
            Y++++  L++ G+  +A  +F +M    + P   T++ M+NG C +     A R+ + +
Sbjct: 154 IYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEM 213

Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
                 P++VT++ LI  L K G L +A+ +L+E+  SG  PN +T  T++     + K 
Sbjct: 214 LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKL 273

Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
           K  LE+  AM++     D         AF                  +GV+ D+ +YN L
Sbjct: 274 KDALEMFKAMQKSMMDIDA------THAF------------------NGVEPDVQTYNIL 309

Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
           I+    EGK   A  L +EM  +G   D  T++ +I+GLCK   +  A    + M    F
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 354 DSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
             N+  +N ++    K G +D  + +F  M     V ++ TY +++    K   +  +  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 410 LLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
           +    + SGV       + ++ GL      ++A  +  +++M+   H
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMDHH 476



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 156/357 (43%), Gaps = 55/357 (15%)

Query: 108 IPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNAL 167
           IP D++S+N L+ C     K   A   F  +      P   TFN +L+GLC       AL
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 168 RMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCC 227
            +F  + K    P +VT+  L+ GLC+ GR+  A  +L  + + G  PN ITY TI+   
Sbjct: 71  DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 228 FRNRKYKLGLEILSAMKRKGYT-FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
            +       L +L  M+   +   D   Y  +I    K GR  +A +   +M   G+  D
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 287 IVSYNTLINLYC-----------------------------------KEGKLEAAYLLLD 311
           IV+Y+ +IN +C                                   KEG L +A  LL 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-----------GFDSNLEAY 360
           EM   G   +  T   L+DGLC +G +K A    + M K            G + +++ Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
           N ++  L  +GK   A  ++E M     V D+ TYSSM++ LCK  RL  A+++  S
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 4/144 (2%)

Query: 315 KQGFE--CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           K G +  CD Y+  ILI   C    +  A      + K+GF   L  +N ++  L  + +
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 373 IDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
           +  A+++F  M   +  T++++++ LC+  R+  A  LL   ++ G++  +     +VDG
Sbjct: 66  VSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 433 LRHSGCRREAKKIQSKIRMAKISH 456
           +   G    A  +  K  M ++SH
Sbjct: 126 MCKMGDTVSALNLLRK--MEELSH 147


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 154/287 (53%)

Query: 45  YNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEML 104
           +N+L+  +C+        ++ + + + G+ P VV+YN+L+ G  R   L     L   ML
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187

Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTD 164
             G+ PDV++Y+ L++ L +  K D+AN +F +M+   L P + TF  +++G CKN   D
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 247

Query: 165 NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
            A+ +++ +      P+L+TYN LI GLCK G L+ A  ++ E+   G  P+ ITYTT++
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307

Query: 225 KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ 284
             C ++       E    M ++    D   Y  +I+   + G   +A   + +M++ G++
Sbjct: 308 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLK 367

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
            D  +Y  +IN +CK+G +     LL EM++ G      T+ +L++G
Sbjct: 368 PDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 2/309 (0%)

Query: 58  FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
           F   +     + E G    +  +N L+    ++  +  +  + D + + G+ P V SYN+
Sbjct: 106 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNT 165

Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
           LM+   +LG  DE  R+   M+   + P   T+++++NGLCK    D+A  +F  +   G
Sbjct: 166 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG 225

Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
            VP  VT+  LI G CK GR+  A  I K++     +P+ ITY T++    +    K   
Sbjct: 226 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 285

Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
            ++  M  KG   D   Y T+I    K G L  A ++ ++M+ +  +LD V Y  LI+  
Sbjct: 286 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 345

Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSN 356
           C+EG    A  +L EM   G + D  T+T++I+  CK G++ KG++L L+ M + G   +
Sbjct: 346 CREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL-LKEMQRDGHVPS 404

Query: 357 LEAYNCIVD 365
           +  YN +++
Sbjct: 405 VVTYNVLMN 413



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 1/298 (0%)

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
           +E+LE G P  ++ +N LMH   + G    A  VF  +    L P   ++N ++NG  + 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
              D   R+   +   G  P++ TY++LI GLCK  ++  A  +  E+   G  PN++T+
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 233

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
           TT++    +N +  L +EI   M  +  + D   Y T+I    K G LK+A   +++M  
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 293

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G++ D ++Y TLI+  CK+G L+ A+     M ++    D   +T LI GLC+ G    
Sbjct: 294 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVD 353

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
           A   L  M  +G   +   Y  I++   K G +     + + M+ +D    S + +N+
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ-RDGHVPSVVTYNV 410



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 4/272 (1%)

Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
           +L  L K +Y       +  + + G+   L  +NIL+   CK G +R A+ +   +   G
Sbjct: 96  VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 155

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
             P+ ++Y T+M    R      G  + SAM   G   D + Y  +I    K  ++ +A 
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 215

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
           +  ++M+  G+  + V++ TLI+ +CK G+++ A  +  +M  Q    D  T+  LI GL
Sbjct: 216 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DS 388
           CK G++K A   ++ M+  G   +   Y  ++D   KDG +D A    + M  +    D 
Sbjct: 276 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDD 335

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
             Y++++  LC+      A K+L   L  G++
Sbjct: 336 VVYTALISGLCREGXSVDAEKMLREMLSVGLK 367



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 4/300 (1%)

Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
           F+ ++    ++ +  +A+  +R  ++H F     T   +++ L K    +      +E+ 
Sbjct: 58  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 117

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
           + G+  +   +  +M    ++   ++   +  A+ + G       Y T++  ++++G L 
Sbjct: 118 ECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 177

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           E       M+  GVQ D+ +Y+ LIN  CKE K++ A  L DEM  +G   +  T T LI
Sbjct: 178 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLI 237

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
           DG CK G +  A    + M       +L  YN ++  L K G +  A ++ + M +K   
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 297

Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
            D  TY++++   CK   L +A +     ++   R+      A++ GL   G   +A+K+
Sbjct: 298 PDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKM 357



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 35/216 (16%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           ++ +   CK ++++ A  +  + +  G++P+ VT+  LID +C+    D    I  +M  
Sbjct: 199 SVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLS 258

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD- 129
             +SPD++TYN+LI G  +   L  +  L+DEM   G+ PD  +Y +L+    + G  D 
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDT 318

Query: 130 ----------------------------------EANRVFQDMICGDLTPCTATFNIMLN 155
                                             +A ++ ++M+   L P   T+ +++N
Sbjct: 319 AFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIIN 378

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             CK        ++ + +Q+ G VP +VTYN+L+ G
Sbjct: 379 EFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 10/374 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSC 95
           V PDVVTY +L++  C+         +L+ M  ++  I PDVVT N+++ G  ++  +  
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 96  SLDLLDEMLEM--GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           +L  +++ +    G PP+  +YN L+    ++G    A  + + M    +     T N +
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPE----LVTYNILIKGLCKAGRLRTARWILKELG 209
           + GLC+   T  AL  FR  +K    PE     VTY+ L+  L     +  A  +  E  
Sbjct: 288 VGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             GH+P+AI Y T++    +  + +    + S+MK  G+  D   Y  +IA F +  RL 
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + +++M   G++ D+ +YNTL++  CK G   A   LL +M   G +    T   L+
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
            G CK G I  A   L  M++ G   N   YN ++D L K G +D AI +F+ M+ K   
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525

Query: 390 TYSSMVHNLCKAKR 403
              +  + L K  R
Sbjct: 526 ANVTTFNALLKGLR 539



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 13/422 (3%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           DV  +N ++ A  +         I   M+  A + PDVVTY  L+ G  +   +  +L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 100 LDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLN 155
           LD M   ++ I PDV + N+++  L + G+  EA    +  +       P T T+N +++
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE---LGDSG 212
             C+      A  +   ++  G    +VT N ++ GLC+AGR   A    +E   +   G
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              NA+TY+T++          + +E+      +G++ D   Y T+I+   + GRL++A 
Sbjct: 315 KG-NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                M   G +LD  +YN LI  +C++ +L  AY LL EM++ G   D  T+  L+ G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDS 388
           CKAG+       L  M   G   ++  +  +V    K GKID A+ +  SM+      ++
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             Y++++  LCK   +  A +L     +  V    +   A++ GLR      +A ++  +
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 449 IR 450
           +R
Sbjct: 554 MR 555



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 179/385 (46%), Gaps = 8/385 (2%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NR 67
           I V   CKA R+  A   ++DG+    L + PDVVT N ++D  C+          +  R
Sbjct: 177 ILVNGLCKAGRVGDA-LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQR 235

Query: 68  MREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M    G  P+ VTYN LI    R   +S + +L+++M   G+P ++ + N+++  L + G
Sbjct: 236 MSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295

Query: 127 KPDEANRVFQD--MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +   A   F++   +  +      T++ ++  L        A+ +F      G  P+ + 
Sbjct: 296 RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM 355

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I GL +AGRL  A  +   + ++G   +   Y  ++    R ++     E+L  MK
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y T+++   K G      + + +M+ DG Q  ++++ TL++ YCK GK++
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L  M++ G   +   +  LID LCK G++  A    + M +    +N+  +N ++
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535

Query: 365 DRLGKDGKIDHAINVFESMEVKDSF 389
             L      + A  + + M  +  F
Sbjct: 536 KGLRDKNMPEKAFELMDQMREERCF 560



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 74/362 (20%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRL--GVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           LN  V   CK+ R+++A A +   +    G  P+ VTYN LIDA+C+  +    Y ++ +
Sbjct: 212 LNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEK 271

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLD----------------------------- 98
           M   G+  ++VT N+++ G  R      +L+                             
Sbjct: 272 MENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHT 331

Query: 99  --------LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
                   L  E +  G  PD   Y +++  L Q G+ ++A  +   M        T  +
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           NI++ G C+ +    A  + + +++ G  P++ TYN L+ G CKAG       +L ++ D
Sbjct: 392 NILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID 451

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ IT+ T++                             GYC       K+G++ E
Sbjct: 452 DGCQPSVITFGTLVH----------------------------GYC-------KVGKIDE 476

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  M   G+  + V YNTLI+  CK G ++ A  L DEM+++    +  T   L+ 
Sbjct: 477 ALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLK 536

Query: 331 GL 332
           GL
Sbjct: 537 GL 538



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 121/276 (43%), Gaps = 2/276 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    +  V      N +  A  +  + +  G  PD + Y  +I    Q    +   
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           ++ + M+EAG   D   YN LIAG  R   L  + +LL EM E+GI PDV +YN+L+   
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G     + +   MI     P   TF  +++G CK    D ALR+ R + + G  P  
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V YN LI  LCK G +  A  +  E+ +     N  T+  ++K        +   E++  
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 243 MKRKGYTFDGFGYCTVIAAFVK-IGRLKEATDYMEQ 277
           M R+   F  +    V+  ++  IG       +M+Q
Sbjct: 554 M-REERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 163/345 (47%), Gaps = 4/345 (1%)

Query: 7   TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
           T L+N C    CK   + +A  +  +   LG+ P+ VTY  L+  Y      + G+ +  
Sbjct: 42  TALVNGC----CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 67  RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
            MR  G+ P++ TYN LI    R      +  L DEM   GI  +V SYN+L+  L + G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
           K  +A ++   M      P   TFN++++G  K     NAL  F  ++  GF P  VTYN
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
           +LI G C+A  +  A   L ++ + G  P  +TYT ++    R        EIL+ M++ 
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y  ++ A    G +K+A    + M   GV+   V Y+ +I  Y +EG    A
Sbjct: 278 GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKA 337

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
             L+ EM ++G   +  ++ + I  LCK    + A   L+ M  I
Sbjct: 338 LKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETI 382



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 4/340 (1%)

Query: 76  DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
           DV    +L+ G  +   ++ +  + DEM  +G+ P+  +Y +LMH  F  G+ ++   +F
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
           ++M  G + P   T+N ++   C+    + A  +F  +   G V  +V+YN LI GLC+ 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
           G+L  A  +L  +   G  P+ IT+  ++    +  K    L   + MK  G+      Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
             +IA F +   +  A   +  M   G++   V+Y  LI+ + +E  +  A+ +L  MEK
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
            G E D +T+ +L+  LC  GN+K AR   + M + G + +   Y+ ++   G++G    
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK 336

Query: 376 AINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
           A+ +   M  K    +S +Y   +  LCK  +   A  LL
Sbjct: 337 ALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALL 376



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 176/380 (46%), Gaps = 3/380 (0%)

Query: 13  CVCTFCKANRLEKAEAIIIDGIRLG-VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
            V   C A  +  A A++  G + G    DV     L++  C+         + + M   
Sbjct: 8   AVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLL 67

Query: 72  GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA 131
           G++P+ VTY +L+ G   +        L +EM   G+ P++++YN L+    + G+ + A
Sbjct: 68  GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127

Query: 132 NRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKG 191
             +F +M    +     ++N ++ GLC++    +A ++   ++  G  P ++T+N+L+ G
Sbjct: 128 RSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDG 187

Query: 192 LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
             KAG++  A     ++  +G  P+A+TY  ++    R R        LS MK +G    
Sbjct: 188 YGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPT 247

Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
              Y  +I +F +   + +A + +  M   G+++D  +Y  L+   C EG ++ A  L  
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307

Query: 312 EMEKQGFECDKYTHTILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
            M ++G E     + ++I G  + G + K  +L +E M + G   N  +Y   +  L KD
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIME-MRQKGLIPNSASYGLTIRVLCKD 366

Query: 371 GKIDHAINVFESMEVKDSFT 390
            K   A  + + ME   SF 
Sbjct: 367 DKCQEAEALLDDMETIRSFA 386



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 8/313 (2%)

Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
           D+T CTA    ++NG CK      A R+F  +   G  P  VTY  L+ G    G+    
Sbjct: 37  DVTACTA----LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKG 92

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             + +E+   G  PN  TY  ++    R  +++    +   M  +G   +   Y T+IA 
Sbjct: 93  FALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
             + G+L +A   ++ M T+G +  I+++N L++ Y K GK+  A    ++M+  GF+  
Sbjct: 153 LCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
             T+ +LI G C+A ++  A   L  M + G +     Y  ++D   ++  +  A  +  
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272

Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
            ME      D+ TY  +V  LC    +  A KL  S  + GV         ++ G    G
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREG 332

Query: 438 CRREAKKIQSKIR 450
              +A K+  ++R
Sbjct: 333 SSYKALKLIMEMR 345



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 40/282 (14%)

Query: 157 LCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
           LC      +AL M  RG +      ++     L+ G CK G +  AR +  E+   G AP
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           N +TYT +M   F + + + G  +   M+R                              
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRR------------------------------ 101

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
                 GV+ ++ +YN LI  +C+ G+ E A  L DEM  +G   +  ++  LI GLC+ 
Sbjct: 102 -----GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTY 391
           G +  A   L+ M   G   ++  +N +VD  GK GK+ +A+  F  M+       + TY
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
           + ++   C+A+ +  A++ L    + G+   K     ++D  
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 4/157 (2%)

Query: 285 LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
           LD+ +   L+N  CK G +  A  + DEM   G   ++ T+T L+ G    G  +     
Sbjct: 36  LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFAL 95

Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
            E M + G + NL  YNC++    + G+ + A ++F+ M V+    +  +Y++++  LC+
Sbjct: 96  FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155

Query: 401 AKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
             +L  A+KLL      G R        +VDG   +G
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAG 192


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 208/451 (46%), Gaps = 6/451 (1%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R  N  V T    N  +KA   +    R G+LPDV+T N L +   +    D    +  +
Sbjct: 161 RAFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQ 220

Query: 68  MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
           ++  G  P+  TY  +I    +   L   L + +EM  +G+ P  + + + +  L    +
Sbjct: 221 LKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHR 280

Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
            D    V Q    G+       +  ++ G C     D A  +F  +++ G VP++  Y+ 
Sbjct: 281 SDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSS 340

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA---MK 244
           LI G CK+  L  A  +  E+   G   N +  + I+ C     +  + LE++     +K
Sbjct: 341 LIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCL---GEMGMTLEVVDQFKELK 397

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   DG  Y  V  A   +G++++A + +E+M +  + LD+  Y TLIN YC +G L 
Sbjct: 398 ESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLV 457

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A+ +  EM+++G + D  T+ +L  GL + G+ +     L++M   G   N   +  I+
Sbjct: 458 TAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMII 517

Query: 365 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
           + L   GK+  A   F S+E K+   YS+MV+  C+   +  + ++ L  L  G    K+
Sbjct: 518 EGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKA 577

Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
           +   ++  L  +G   +A K+  ++ ++ + 
Sbjct: 578 SCFKLLSKLCMTGDIEKAVKLLDRMLLSNVE 608



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 184/413 (44%), Gaps = 25/413 (6%)

Query: 11  NICVCTFCKANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
           NI     C   ++E A  ++  +   RLG+  DV  Y  LI+ YC        + +   M
Sbjct: 409 NIVFDALCMLGKVEDAVEMVEEMKSKRLGL--DVKHYTTLINGYCLQGDLVTAFNMFKEM 466

Query: 69  REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
           +E G+ PD+VTYN L AG +RN     ++ LLD M   G+ P+  ++  ++  L   GK 
Sbjct: 467 KEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKV 526

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
            EA   F  +   ++      ++ M+NG C+      +  +F  L   G + +  +   L
Sbjct: 527 LEAEVYFNSLEDKNI----EIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKL 582

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +  LC  G +  A  +L  +  S   P+ I Y+ I+    +    K    +      +G+
Sbjct: 583 LSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGF 642

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE-------- 300
           T D   Y  +I ++ ++  L+EA D  + M   G++ D++++  L++   KE        
Sbjct: 643 TPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSS 702

Query: 301 -GKLEAAYL----LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
            GK +   L    +L +ME+     D   +T+L+DG  K  N + A    + M + G + 
Sbjct: 703 HGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEP 762

Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
           +   Y  +V  L   G ++ A+ +   M  K    D    S++   + KA+++
Sbjct: 763 DTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKV 815



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 179/416 (43%), Gaps = 27/416 (6%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+  D V YN++ DA C     +    ++  M+   +  DV  Y +LI G      L  +
Sbjct: 400 GMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTA 459

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            ++  EM E G+ PD+ +YN L   L + G   E  ++   M    + P + T  +++ G
Sbjct: 460 FNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEG 519

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI-LKELGDSGHAP 215
           LC       A   F  L+       +  Y+ ++ G C+   ++ +  + LK L     A 
Sbjct: 520 LCSGGKVLEAEVYFNSLEDKN----IEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAK 575

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
            A  +  + K C      K  +++L  M           Y  ++AA  + G +K A    
Sbjct: 576 KASCFKLLSKLCMTGDIEK-AVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLF 634

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           +  V  G   D+V+Y  +IN YC+   L+ A+ L  +M+++G + D  T T+L+DG  K 
Sbjct: 635 DVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKE 694

Query: 336 ---------GNIKGARLH----LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
                    G  K   L+    L  M ++  + ++  Y  ++D   K      A+++F+ 
Sbjct: 695 YLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDK 754

Query: 383 M----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG----VRILKSAQKAVV 430
           M       D+ TY+++V  LC    +  A  LL      G    V I+ + ++ ++
Sbjct: 755 MIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGII 810



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 179/400 (44%), Gaps = 11/400 (2%)

Query: 17  FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           FC   +L++A+ +  D  R GV+PDV  Y+ LI  YC+  +      + + M   G+  +
Sbjct: 310 FCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTN 369

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
            V  + ++       +    +D   E+ E G+  D  +YN +   L  LGK ++A  + +
Sbjct: 370 CVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVE 429

Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
           +M    L      +  ++NG C       A  MF+ +++ G  P++VTYN+L  GL + G
Sbjct: 430 EMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNG 489

Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
             R    +L  +   G  PN+ T+  I++      K        ++++ K        Y 
Sbjct: 490 HARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEI----YS 545

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
            ++  + +   +K++ +   +++  G      S   L++  C  G +E A  LLD M   
Sbjct: 546 AMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLS 605

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
             E  K  ++ ++  LC+AG++K AR   +     GF  ++  Y  +++   +   +  A
Sbjct: 606 NVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEA 665

Query: 377 INVFESMEVK----DSFTYSSMVHNLCK---AKRLPSASK 409
            ++F+ M+ +    D  T++ ++    K    KR  S  K
Sbjct: 666 HDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGK 705



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 23/319 (7%)

Query: 37  GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
           G+ P+  T+ M+I+  C            N + +  I      Y++++ G     L+  S
Sbjct: 505 GMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMVNGYCETDLVKKS 560

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
            ++  ++L  G      S   L+  L   G  ++A ++   M+  ++ P    ++ +L  
Sbjct: 561 YEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAA 620

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC+     NA  +F      GF P++VTY I+I   C+   L+ A  + +++   G  P+
Sbjct: 621 LCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPD 680

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF----------------DGFGYCTVIA 260
            IT+T ++    +     LG    S  KRK  +                 D   Y  ++ 
Sbjct: 681 VITFTVLLDGSLKEY---LGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMD 737

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
             +K    ++A    ++M+  G++ D ++Y  L++  C  G +E A  LL+EM  +G   
Sbjct: 738 GHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTP 797

Query: 321 DKYTHTILIDGLCKAGNIK 339
           D +  + L  G+ KA  ++
Sbjct: 798 DVHIISALKRGIIKARKVQ 816



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 13/199 (6%)

Query: 14  VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
           +   C+A  ++ A  +    +  G  PDVVTY ++I++YC+       + +   M+  GI
Sbjct: 618 LAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGI 677

Query: 74  SPDVVTYNSLIAGATRNSL----------LSCSL---DLLDEMLEMGIPPDVWSYNSLMH 120
            PDV+T+  L+ G+ +  L           + SL    +L +M +M I PDV  Y  LM 
Sbjct: 678 KPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMD 737

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
              +     +A  +F  MI   L P T T+  +++GLC   + + A+ +   +   G  P
Sbjct: 738 GHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTP 797

Query: 181 ELVTYNILIKGLCKAGRLR 199
           ++   + L +G+ KA +++
Sbjct: 798 DVHIISALKRGIIKARKVQ 816



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 59/323 (18%)

Query: 143 LTPCTA--TFNIM--LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
            TP ++  TF+++  L+ L  N    +AL  F  L+  GF   + TY  +IK L      
Sbjct: 59  FTPPSSFSTFDVLQTLHHLHNN--PSHALSFFTHLRHTGFSHTISTYAAIIKILSFWNLQ 116

Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFR--NRKYKLGLEILSAMKRKGYTFDGFGYC 256
           R    +   L +  H P       + +  F+  N  +K    +L A       F+GF   
Sbjct: 117 RQLDTLFLHLINRDHPPLPFPLLNLFETLFQDFNTSHKNNYFLLRA-------FNGF--- 166

Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
             +   V +    +A D++ Q    G+  D+++ N L N   + G+++ A  + +++++ 
Sbjct: 167 --VKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRF 224

Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-------FDSNLE----------- 358
           GF  + YT+ I+I  LCK G++K      E M ++G       F + +E           
Sbjct: 225 GFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLG 284

Query: 359 -----------------AYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHN 397
                            AY  +V     + K+D A  VF+ ME    V D + YSS++H 
Sbjct: 285 YEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHG 344

Query: 398 LCKAKRLPSASKLLLSCLKSGVR 420
            CK+  L  A  L    +  GV+
Sbjct: 345 YCKSHNLLRALALHDEMISRGVK 367


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 172/379 (45%), Gaps = 35/379 (9%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA--------- 60
             I +  FC+   + K   ++     +GV P+V  Y +LI+A C+    D          
Sbjct: 110 FGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 61  --------------------------GYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
                                     G+ +  +M+  G+ P++ TYNSLI    R+  LS
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 95  CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIML 154
            +  + DE+ + G+  +  +YN L+  L + G+  +A  + + M    + P T TFN+++
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
           +GLC     D AL     L+  G  P LVTYNILI G  K G       +++E+ D G +
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349

Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
           P+ +TYT +M    R+   +   E+   MKR G   D   Y  +I      G + EA+  
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            + MV   +Q + V YNT+IN YCKE     A   L+EM K G   +  ++   I  LCK
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCK 469

Query: 335 AGNIKGARLHLEYMNKIGF 353
            G    A+  L+ M + G 
Sbjct: 470 DGKSIEAKRLLKEMTEAGL 488



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 6/389 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV ++ + I A+C+  +   G+ +L +M   G+SP+V  Y  LI    RN  +  +  + 
Sbjct: 106 DVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M ++G+  + + Y  +++  F+ G   +   ++Q M    + P   T+N ++   C++
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A ++F  + K G     VTYNILI GLC+ G++  A  +L+ +  +   P   T+
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             +M       +    L  L  +K  G       Y  +I+ F K+G     ++ + +M  
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+    V+Y  L+N + +   +E AY +   M++ G   D++T+ +LI GLC  GN+  
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVE 405

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMV 395
           A    + M ++    N   YN +++   K+     A+   E M VK+  T     Y S +
Sbjct: 406 ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPNVASYISTI 464

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             LCK  +   A +LL    ++G++  +S
Sbjct: 465 QILCKDGKSIEAKRLLKEMTEAGLKPPES 493



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 191/430 (44%), Gaps = 9/430 (2%)

Query: 31  IDGIRLGVL----PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG 86
           +D  +L VL    P   ++N  +D   +  + D  +             DV ++   I  
Sbjct: 58  LDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL-GRTQFDVYSFGITIKA 116

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
              N  +S   +LL +M  MG+ P+V+ Y  L+    + G  D+A  +F  M    L   
Sbjct: 117 FCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAAN 176

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
              + IM+NG  K  Y  +   +++ ++  G +P L TYN LI   C+ G+L  A  +  
Sbjct: 177 QYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD 236

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+   G A NA+TY  ++    R  +      +L  MKR         +  ++      G
Sbjct: 237 EISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTG 296

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +L +A  Y+E++   G+   +V+YN LI+ + K G       L+ EME +G    K T+T
Sbjct: 297 QLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYT 356

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           IL++   ++ +I+ A      M +IG   +   Y  ++  L   G +  A  +++SM   
Sbjct: 357 ILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEM 416

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               +   Y++M++  CK      A K L   +K+GV    ++  + +  L   G   EA
Sbjct: 417 HLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEA 476

Query: 443 KKIQSKIRMA 452
           K++  ++  A
Sbjct: 477 KRLLKEMTEA 486



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 40/375 (10%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           +++I  + ++ LL  SLD    M+  G  P  +S+N+ +  L + G  D     F + + 
Sbjct: 42  DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL- 100

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G       +F I +   C+N        +   ++  G  P +  Y ILI+  C+ G +  
Sbjct: 101 GRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ +   + D G A N   YT ++   F+    K G E+   MK  G   + + Y ++I 
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            + + G+L  A    +++   GV  + V+YN LI   C++G++  A  LL+ M++     
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-------- 372
              T  +L+DGLC  G +  A  +LE +  IG    L  YN ++    K G         
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 373 ---------------------------IDHAINVFESME----VKDSFTYSSMVHNLCKA 401
                                      I+ A  +F  M+    V D  TY  ++H LC  
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 402 KRLPSASKLLLSCLK 416
             +  ASKL  S ++
Sbjct: 401 GNMVEASKLYKSMVE 415



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 35/309 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C+  +L  A  +  +  + GV  + VTYN+LI   C+         +L RM+ 
Sbjct: 216 NSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           A I+P   T+N L+ G      L  +L  L+++  +G+ P + +YN L+    ++G    
Sbjct: 276 AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSV 335

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + + ++M    ++P   T+ I++N   ++   + A  MF  +++ G VP+  TY +LI 
Sbjct: 336 VSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIH 395

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G +  A  + K + +    PN + Y T++                          
Sbjct: 396 GLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMIN------------------------- 430

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
              GYC    ++       +A  ++E+MV +GV  ++ SY + I + CK+GK   A  LL
Sbjct: 431 ---GYCKECNSY-------KALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 311 DEMEKQGFE 319
            EM + G +
Sbjct: 481 KEMTEAGLK 489



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 110/210 (52%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  N+ +   C   +L+KA + +     +G+ P +VTYN+LI  + +  +      ++
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M + GISP  VTY  L+    R+  +  + ++   M  +G+ PD  +Y  L+H L   
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G   EA+++++ M+   L P    +N M+NG CK   +  AL+    + K+G  P + +Y
Sbjct: 401 GNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASY 460

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAP 215
              I+ LCK G+   A+ +LKE+ ++G  P
Sbjct: 461 ISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 189/402 (47%), Gaps = 9/402 (2%)

Query: 8   RLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           R+L   +  F +A  L +A AI+         PD   Y  L+ A+ +   F     +  R
Sbjct: 154 RVLPTAIRVFARAGCLAEASAIL----EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQR 209

Query: 68  MREAGISPDVVTYNSLIAGATRNSL-LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M + G+ P +VTYN +    ++ S+     + L+D M E GI  D ++YN+L+ C  + G
Sbjct: 210 MVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRG 269

Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
              EA +VF +M      P   TFN +L+   K R  + A+ + + ++  G  P +VTYN
Sbjct: 270 LHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYN 329

Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
            LI    K G L  A  + +E+   G  P+ +TYTT++    R  K    L   S M R 
Sbjct: 330 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRN 389

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G + +   Y  +I      G+  E     + + + G   D+V++NTL++++ + G     
Sbjct: 390 GCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEV 449

Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
             +  EM+K G+  ++ T+  LI    + G    A    + M + G   ++  YN ++  
Sbjct: 450 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA 509

Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
           L + G+ + A  +F  M  +    D  +YSS++H    AK+L
Sbjct: 510 LARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKL 551



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 212/440 (48%), Gaps = 9/440 (2%)

Query: 18  CKANRLEKAEAIIIDGIRL-GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
           C+   L +  A + D ++  G  PD VT+N L+D Y +    +    +L RM  AG +P 
Sbjct: 265 CRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPS 324

Query: 77  VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
           VVTYNSLI+   ++ LL  +L+L  EM   G+ PDV +Y +L+  L ++GK D A   + 
Sbjct: 325 VVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYS 384

Query: 137 DMICGDLTPCTATFN--IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
           +M+    +P   T+N  I L+G+ + ++T+  + +F  L+  G+VP++VT+N L+    +
Sbjct: 385 EMVRNGCSPNLCTYNALIKLHGV-RGKFTE-MMAVFDDLRSAGYVPDVVTWNTLLSVFGQ 442

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
            G       + KE+  +G+ P   TY +++    R   +   +EI   M   G   D   
Sbjct: 443 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDIST 502

Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
           Y  V++A  + GR ++A     +MV    + D +SY++L++ Y    KL+    L +++ 
Sbjct: 503 YNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIY 562

Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG--- 371
            +  E   +    L+    K  N+       + + +     ++   N +V   GK+    
Sbjct: 563 AERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVK 622

Query: 372 KIDHAINVFESMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
           K++  +++     +  S  TY+S++H   +         +L     SG+R  + +   V+
Sbjct: 623 KVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVI 682

Query: 431 DGLRHSGCRREAKKIQSKIR 450
                 G  +EA ++ S+++
Sbjct: 683 YAYGRKGQMKEASRLFSEMK 702



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/479 (22%), Positives = 193/479 (40%), Gaps = 39/479 (8%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
            N  +  + KA + E+A  ++      G  P VVTYN LI AY +    +    +   M 
Sbjct: 293 FNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEME 352

Query: 70  EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
             G+ PDVVTY +LI+G  R   +  +L    EM+  G  P++ +YN+L+      GK  
Sbjct: 353 FRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFT 412

Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
           E   VF D+      P   T+N +L+   +N        +F+ ++K G++PE  TY  LI
Sbjct: 413 EMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 472

Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
               + G    A  I K + ++G  P+  TY  ++    R  +++   ++ + M  +   
Sbjct: 473 SSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCK 532

Query: 250 FDGFGYCTVIAAFV-----------------------------------KIGRLKEATDY 274
            D   Y +++ A+                                    K+  L E    
Sbjct: 533 PDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKA 592

Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
            +++      LDI   N ++++Y K   ++    +L  M +        T+  L+    +
Sbjct: 593 FQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSR 652

Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---VK-DSFT 390
            G+ +     L  +   G   +  +YN ++   G+ G++  A  +F  M+   VK D  T
Sbjct: 653 LGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVT 712

Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           Y+  + +         A  L+   +  G R  +    +++ G    G   EAK   S +
Sbjct: 713 YNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNL 771



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 53/390 (13%)

Query: 11  NICVCTFCKANRLEKAEAI---------IIDGIR-LGVLPDVVTYNMLIDAYCQFVSFDA 60
           N C    C  N L K   +         + D +R  G +PDVVT+N L+  + Q      
Sbjct: 389 NGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSE 448

Query: 61  GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
              +   M++AG  P+  TY SLI+  +R  L   ++++   M+E GI PD+ +YN+++ 
Sbjct: 449 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLS 508

Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
            L + G+ ++A ++F +M+  D  P   +++ +L+     +  D      + L +  +  
Sbjct: 509 ALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDK----MKTLSEDIYAE 564

Query: 181 ELVTYNILIKGLC---------------------------------------KAGRLRTA 201
            +  +N L+K L                                        K   ++  
Sbjct: 565 RIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKV 624

Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
             +L  + ++    +A TY ++M    R    +    IL+ +K  G   D + Y TVI A
Sbjct: 625 EEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYA 684

Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
           + + G++KEA+    +M   GV+ DIV+YN  I  Y      E A  L+  +  QG   +
Sbjct: 685 YGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPN 744

Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
           + T   ++ G  + G +  A+  L  + KI
Sbjct: 745 ERTFNSILQGYSRHGRMVEAKSFLSNLPKI 774



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 5   LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
           L   +LN  V  + K   ++K E ++   +   +     TYN L+  Y +    +   +I
Sbjct: 603 LDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESI 662

Query: 65  LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
           L  ++ +G+ PD  +YN++I    R   +  +  L  EM   G+ PD+ +YN  +     
Sbjct: 663 LTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVA 722

Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN-------RYTDNALRMFRGLQKH 176
               +EA  + + ++     P   TFN +L G  ++        +  N  +++ G+ K 
Sbjct: 723 NIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGISKQ 781


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 224/521 (42%), Gaps = 75/521 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF-VSFDAGY 62
           +L  R     +    +A R E+A  +  +  R GV+P +VTYN+++D Y +   S+    
Sbjct: 86  RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIV 145

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLL----------------------------- 93
            +L  MR AG+ PD  T +++IA   R+ LL                             
Sbjct: 146 ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVF 205

Query: 94  ------SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
                 + +L +L EM + G  PD  +YN L     + G  +EA +    M    L P T
Sbjct: 206 GKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNT 265

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N ++         D AL +F  ++K+G+VP + TYN++   L K  R      +L+E
Sbjct: 266 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEE 325

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  SG  PN +T+ T++  C +         +L+ MK  G       Y T+I+A+ + G 
Sbjct: 326 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGS 385

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
              A    ++M++ G    + +YN L+N+  ++G    A  ++ +M K GF+ +  ++++
Sbjct: 386 RTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSL 445

Query: 328 LIDGLCKAGN-----------------------------------IKGARLHLEYMNKIG 352
           L+    K GN                                   ++G     + +   G
Sbjct: 446 LLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQG 505

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
           +  +L  +N ++    K+G    A  +F+S++      D  TY+S++    K+     A 
Sbjct: 506 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 565

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           K+L     S V+    +   V++G    G  +EA++I S++
Sbjct: 566 KILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 606



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 192/440 (43%), Gaps = 39/440 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N    T+ +A   E+A   +      G+LP+  TYN ++ AY      D    + +RM++
Sbjct: 234 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 293

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD--VW--------------- 113
            G  P+V TYN +     + S  +  L++L+EM   G  P+   W               
Sbjct: 294 NGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDY 353

Query: 114 ------------------SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                             +YN+L+    + G    A +++ +MI    TPC  T+N +LN
Sbjct: 354 VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLN 413

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L +      A  +   + K+GF P   +Y++L++   K G       I KE+      P
Sbjct: 414 VLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFP 473

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +   T++   F+ R+ +   +    +K +GY  D   + +++A + K G   +AT+  
Sbjct: 474 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMF 533

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + +   G+  D+++YN+L+++Y K  +   A  +L +++    + D  ++  +I+G CK 
Sbjct: 534 DSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQ 593

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
           G IK A+  L  M   G    +  Y+ +V         + A  V   M   +      TY
Sbjct: 594 GLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTY 653

Query: 392 SSMVHNLCKAKRLPSASKLL 411
             +V + CKAKR   A + L
Sbjct: 654 RRVVDSYCKAKRYDEAREFL 673



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 142/355 (40%), Gaps = 78/355 (21%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TYN LI AY +  S    + + + M  +G +P + TYN+L+   +R    S +  ++ +M
Sbjct: 372 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 431

Query: 104 LEMGIPPDVWSYNSLMHCL-----------------------------------FQLGKP 128
           L+ G  P+  SY+ L+ C                                    F+  + 
Sbjct: 432 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRL 491

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +   + FQ++      P    FN ML    KN     A  MF  +++ G  P+L+TYN L
Sbjct: 492 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 551

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +    K+     A  ILK+L  S   P+ ++Y                            
Sbjct: 552 MDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN--------------------------- 584

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                   TVI  F K G +KEA   + +M+ DG+   +V+Y+TL+  Y        A  
Sbjct: 585 --------TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEARE 636

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-----FDSNLE 358
           +++ M     +  + T+  ++D  CKA     AR   E++++I      FD  L+
Sbjct: 637 VVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAR---EFLSEISDTDQNFDQKLQ 688



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 3/246 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  LL  C      A  +E  E  +  G    + P  V    L+ A  +    +      
Sbjct: 442 SYSLLLQCYAKGGNAAGIESIEKEVYVGT---IFPSWVILRTLVIANFKCRRLEGVEKAF 498

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             ++  G  PD+V +NS++A   +N L S + ++ D + + G+ PD+ +YNSLM    + 
Sbjct: 499 QEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKS 558

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  EA ++ + +    + P   ++N ++NG CK      A R+   +   G  P +VTY
Sbjct: 559 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 618

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + L+ G         AR ++  +      P  +TY  ++    + ++Y    E LS +  
Sbjct: 619 HTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 678

Query: 246 KGYTFD 251
               FD
Sbjct: 679 TDQNFD 684



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 7/231 (3%)

Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK-RKGYTFDGF 253
           +G    A  +L+   D G A +A     +++   R  ++ +  ++L  M    G   D  
Sbjct: 32  SGHWEWALALLRWASDEG-AADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVR 90

Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL-LLDE 312
            Y TV+ A  + GR + A     ++   GV   IV+YN ++++Y + G+     + LL+E
Sbjct: 91  AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 150

Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
           M   G E D +T + +I    + G +  A    E +   G    +  YN ++   GK G 
Sbjct: 151 MRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 210

Query: 373 IDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
              A+ V + ME      D+ TY+ +     +A     A+K L +    G+
Sbjct: 211 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL 261


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 172/377 (45%), Gaps = 35/377 (9%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA----------- 60
           I +  FC+   + K   ++     +GV P+V  Y +LI+A C+    D            
Sbjct: 112 ITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL 171

Query: 61  ------------------------GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
                                   G+ +  +M+  G+ P++ TYNSLI    R+  LS +
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLA 231

Query: 97  LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
             + DE+ + G+  +  +YN L+  L + G+  +A  + + M    + P T TFN++++G
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDG 291

Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
           LC     D AL     L+  G  P LVTYNILI G  K G       +++E+ D G +P+
Sbjct: 292 LCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPS 351

Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
            +TYT +M    R+   +   E+   MKR G   D   Y  +I      G + EA+   +
Sbjct: 352 KVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYK 411

Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
            MV   +Q + V YNT+IN YCKE     A   L+EM K G   +  ++   I  LCK G
Sbjct: 412 SMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDG 471

Query: 337 NIKGARLHLEYMNKIGF 353
               A+  L+ M + G 
Sbjct: 472 KSIEAKRLLKEMTEAGL 488



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 183/389 (47%), Gaps = 6/389 (1%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
           DV ++ + I A+C+  +   G+ +L +M   G+SP+V  Y  LI    RN  +  +  + 
Sbjct: 106 DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMF 165

Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
             M ++G+  + + Y  +++  F+ G   +   ++Q M    + P   T+N ++   C++
Sbjct: 166 SRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRD 225

Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
                A ++F  + K G     VTYNILI GLC+ G++  A  +L+ +  +   P   T+
Sbjct: 226 GKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTF 285

Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
             +M       +    L  L  +K  G       Y  +I+ F K+G     ++ + +M  
Sbjct: 286 NMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMED 345

Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
            G+    V+Y  L+N + +   +E AY +   M++ G   D++T+ +LI GLC  GN+  
Sbjct: 346 RGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVE 405

Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT-----YSSMV 395
           A    + M ++    N   YN +++   K+     A+   E M VK+  T     Y S +
Sbjct: 406 ASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPNVASYISTI 464

Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKS 424
             LCK  +   A +LL    ++G++  +S
Sbjct: 465 QILCKDGKSIEAKRLLKEMTEAGLKPPES 493



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 192/430 (44%), Gaps = 9/430 (2%)

Query: 31  IDGIRLGVL----PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAG 86
           +DG +L VL    P   ++N  +D   +  + D  +             DV ++   I  
Sbjct: 58  LDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL-GRTQFDVYSFWITIKA 116

Query: 87  ATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPC 146
              N  +S   +LL +M  MG+ P+V+ Y  L+    + G  D+A  +F  M    L   
Sbjct: 117 FCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAAN 176

Query: 147 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 206
              + IM+NG  K  Y  +   +++ ++  G +P L TYN LI   C+ G+L  A  +  
Sbjct: 177 QYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFD 236

Query: 207 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 266
           E+   G A NA+TY  ++    R  +      +L  MKR         +  ++      G
Sbjct: 237 EISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTG 296

Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
           +L +A  Y+E++   G+   +V+YN LI+ + K G       L+ EME +G    K T+T
Sbjct: 297 QLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYT 356

Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME-- 384
           IL++   ++ +I+ A      M +IG   +   Y  ++  L   G +  A  +++SM   
Sbjct: 357 ILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEM 416

Query: 385 --VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
               +   Y++M++  CK      A K L   +K+GV    ++  + +  L   G   EA
Sbjct: 417 HLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEA 476

Query: 443 KKIQSKIRMA 452
           K++  ++  A
Sbjct: 477 KRLLKEMTEA 486



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 40/375 (10%)

Query: 81  NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
           +++I  + ++ LL  SLD    M+  G  P  +S+N+ +  L + G  D     F + + 
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL- 100

Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
           G       +F I +   C+N        +   ++  G  P +  Y ILI+  C+ G +  
Sbjct: 101 GRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160

Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
           A+ +   + D G A N   YT ++   F+    K G E+   MK  G   + + Y ++I 
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220

Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
            + + G+L  A    +++   GV  + V+YN LI   C++G++  A  LL+ M++     
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280

Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK-------- 372
              T  +L+DGLC  G +  A  +LE +  IG    L  YN ++    K G         
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 373 ---------------------------IDHAINVFESME----VKDSFTYSSMVHNLCKA 401
                                      I+ A  +F  M+    V D  TY  ++H LC  
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 402 KRLPSASKLLLSCLK 416
             +  ASKL  S ++
Sbjct: 401 GNMVEASKLYKSMVE 415



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 35/309 (11%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N  +  +C+  +L  A  +  +  + GV  + VTYN+LI   C+         +L RM+ 
Sbjct: 216 NSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
           A I+P   T+N L+ G      L  +L  L+++  +G+ P + +YN L+    ++G    
Sbjct: 276 AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSV 335

Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
            + + ++M    ++P   T+ I++N   ++   + A  MF  +++ G VP+  TY +LI 
Sbjct: 336 VSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIH 395

Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
           GLC  G +  A  + K + +    PN + Y T++                          
Sbjct: 396 GLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMIN------------------------- 430

Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
              GYC    ++       +A  ++E+MV +GV  ++ SY + I + CK+GK   A  LL
Sbjct: 431 ---GYCKECNSY-------KALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 311 DEMEKQGFE 319
            EM + G +
Sbjct: 481 KEMTEAGLK 489



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 110/210 (52%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           +TR  N+ +   C   +L+KA + +     +G+ P +VTYN+LI  + +  +      ++
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             M + GISP  VTY  L+    R+  +  + ++   M  +G+ PD  +Y  L+H L   
Sbjct: 341 REMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIK 400

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
           G   EA+++++ M+   L P    +N M+NG CK   +  AL+    + K+G  P + +Y
Sbjct: 401 GNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASY 460

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAP 215
              I+ LCK G+   A+ +LKE+ ++G  P
Sbjct: 461 ISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 10/374 (2%)

Query: 38  VLPDVVTYNMLIDAYCQFVSFDAGYTILNRM--REAGISPDVVTYNSLIAGATRNSLLSC 95
           V PDVVTY +L++  C+         +L+ M  ++  I PDVVT N+++ G  ++  +  
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 96  SLDLLDEMLEM--GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
           +L  +++ +    G PP+  +YN L+    ++G    A  + + M    +     T N +
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPE----LVTYNILIKGLCKAGRLRTARWILKELG 209
           + GLC+   T  AL  FR  +K    PE     VTY+ L+  L     +  A  +  E  
Sbjct: 288 VGGLCRAGRTGAALEFFR--EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKM 345

Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
             GH+P+AI Y T++    +  + +    + S+MK  G+  D   Y  +IA F +  RL 
Sbjct: 346 SEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLH 405

Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
           EA + +++M   G++ D+ +YNTL++  CK G   A   LL +M   G +    T   L+
Sbjct: 406 EAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465

Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
            G CK G I  A   L  M++ G   N   YN ++D L K G +D AI +F+ M+ K   
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525

Query: 390 TYSSMVHNLCKAKR 403
              +  + L K  R
Sbjct: 526 ANVTTFNALLKGLR 539



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 13/422 (3%)

Query: 41  DVVTYNMLIDAYCQFVSFDAGYTILNRMRE-AGISPDVVTYNSLIAGATRNSLLSCSLDL 99
           DV  +N ++ A  +         I   M+  A + PDVVTY  L+ G  +   +  +L +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 100 LDEM--LEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLN 155
           LD M   ++ I PDV + N+++  L + G+  EA    +  +       P T T+N +++
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE---LGDSG 212
             C+      A  +   ++  G    +VT N ++ GLC+AGR   A    +E   +   G
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314

Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
              NA+TY+T++          + +E+      +G++ D   Y T+I+   + GRL++A 
Sbjct: 315 KG-NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
                M   G +LD  +YN LI  +C++ +L  AY LL EM++ G   D  T+  L+ G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 333 CKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDS 388
           CKAG+       L  M   G   ++  +  +V    K GKID A+ +  SM+      ++
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
             Y++++  LCK   +  A +L     +  V    +   A++ GLR      +A ++  +
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 449 IR 450
           +R
Sbjct: 554 MR 555



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 179/385 (46%), Gaps = 8/385 (2%)

Query: 12  ICVCTFCKANRLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTIL-NR 67
           I V   CKA R+  A   ++DG+    L + PDVVT N ++D  C+          +  R
Sbjct: 177 ILVNGLCKAGRVGDA-LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQR 235

Query: 68  MREA-GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
           M    G  P+ VTYN LI    R   +S + +L+++M   G+P ++ + N+++  L + G
Sbjct: 236 MSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAG 295

Query: 127 KPDEANRVFQD--MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
           +   A   F++   +  +      T++ ++  L        A+ +F      G  P+ + 
Sbjct: 296 RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIM 355

Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
           Y  +I GL +AGRL  A  +   + ++G   +   Y  ++    R ++     E+L  MK
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415

Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
             G   D   Y T+++   K G      + + +M+ DG Q  ++++ TL++ YCK GK++
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
            A  +L  M++ G   +   +  LID LCK G++  A    + M +    +N+  +N ++
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535

Query: 365 DRLGKDGKIDHAINVFESMEVKDSF 389
             L      + A  + + M  +  F
Sbjct: 536 KGLRDKNMPEKAFELMDQMREERCF 560



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 157/362 (43%), Gaps = 74/362 (20%)

Query: 10  LNICVCTFCKANRLEKAEAIIIDGIRL--GVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
           LN  V   CK+ R+++A A +   +    G  P+ VTYN LIDA+C+  +    Y ++ +
Sbjct: 212 LNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEK 271

Query: 68  MREAGISPDVVTYNSLIAG----------------------------ATRNSLLSC---- 95
           M   G+  ++VT N+++ G                             T ++L+      
Sbjct: 272 MENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHT 331

Query: 96  -----SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATF 150
                +++L  E +  G  PD   Y +++  L Q G+ ++A  +   M        T  +
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391

Query: 151 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 210
           NI++ G C+ +    A  + + +++ G  P++ TYN L+ G CKAG       +L ++ D
Sbjct: 392 NILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID 451

Query: 211 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 270
            G  P+ IT+ T++                             GYC       K+G++ E
Sbjct: 452 DGCQPSVITFGTLVH----------------------------GYC-------KVGKIDE 476

Query: 271 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 330
           A   +  M   G+  + V YNTLI+  CK G ++ A  L DEM+++    +  T   L+ 
Sbjct: 477 ALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLK 536

Query: 331 GL 332
           GL
Sbjct: 537 GL 538



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 121/276 (43%), Gaps = 2/276 (0%)

Query: 3   GKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
           GK +    +  V      N +  A  +  + +  G  PD + Y  +I    Q    +   
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
           ++ + M+EAG   D   YN LIAG  R   L  + +LL EM E+GI PDV +YN+L+   
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
            + G     + +   MI     P   TF  +++G CK    D ALR+ R + + G  P  
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
           V YN LI  LCK G +  A  +  E+ +     N  T+  ++K        +   E++  
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 243 MKRKGYTFDGFGYCTVIAAFVK-IGRLKEATDYMEQ 277
           M R+   F  +    V+  ++  IG       +M+Q
Sbjct: 554 M-REERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 224/521 (42%), Gaps = 75/521 (14%)

Query: 4   KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF-VSFDAGY 62
           +L  R     +    +A R E+A  +  +  R GV+P +VTYN+++D Y +   S+    
Sbjct: 177 RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIV 236

Query: 63  TILNRMREAGISPDVVTYNSLIAGATRNSLL----------------------------- 93
            +L  MR AG+ PD  T +++IA   R+ LL                             
Sbjct: 237 ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVF 296

Query: 94  ------SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCT 147
                 + +L +L EM + G  PD  +YN L     + G  +EA +    M    L P T
Sbjct: 297 GKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNT 356

Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
            T+N ++         D AL +F  ++K+G+VP + TYN++   L K  R      +L+E
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEE 416

Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
           +  SG  PN +T+ T++  C +         +L+ MK  G       Y T+I+A+ + G 
Sbjct: 417 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGS 476

Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
              A    ++M++ G    + +YN L+N+  ++G    A  ++ +M K GF+ +  ++++
Sbjct: 477 RTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSL 536

Query: 328 LIDGLCKAGN-----------------------------------IKGARLHLEYMNKIG 352
           L+    K GN                                   ++G     + +   G
Sbjct: 537 LLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQG 596

Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
           +  +L  +N ++    K+G    A  +F+S++      D  TY+S++    K+     A 
Sbjct: 597 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 656

Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
           K+L     S V+    +   V++G    G  +EA++I S++
Sbjct: 657 KILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 192/440 (43%), Gaps = 39/440 (8%)

Query: 11  NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
           N    T+ +A   E+A   +      G+LP+  TYN ++ AY      D    + +RM++
Sbjct: 325 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 384

Query: 71  AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD--VW--------------- 113
            G  P+V TYN +     + S  +  L++L+EM   G  P+   W               
Sbjct: 385 NGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDY 444

Query: 114 ------------------SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
                             +YN+L+    + G    A +++ +MI    TPC  T+N +LN
Sbjct: 445 VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLN 504

Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
            L +      A  +   + K+GF P   +Y++L++   K G       I KE+      P
Sbjct: 505 VLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFP 564

Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
           + +   T++   F+ R+ +   +    +K +GY  D   + +++A + K G   +AT+  
Sbjct: 565 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMF 624

Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
           + +   G+  D+++YN+L+++Y K  +   A  +L +++    + D  ++  +I+G CK 
Sbjct: 625 DSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQ 684

Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTY 391
           G IK A+  L  M   G    +  Y+ +V         + A  V   M   +      TY
Sbjct: 685 GLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTY 744

Query: 392 SSMVHNLCKAKRLPSASKLL 411
             +V + CKAKR   A + L
Sbjct: 745 RRVVDSYCKAKRYDEAREFL 764



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 142/355 (40%), Gaps = 78/355 (21%)

Query: 44  TYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEM 103
           TYN LI AY +  S    + + + M  +G +P + TYN+L+   +R    S +  ++ +M
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 522

Query: 104 LEMGIPPDVWSYNSLMHCL-----------------------------------FQLGKP 128
           L+ G  P+  SY+ L+ C                                    F+  + 
Sbjct: 523 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRL 582

Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
           +   + FQ++      P    FN ML    KN     A  MF  +++ G  P+L+TYN L
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642

Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
           +    K+     A  ILK+L  S   P+ ++Y                            
Sbjct: 643 MDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN--------------------------- 675

Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
                   TVI  F K G +KEA   + +M+ DG+   +V+Y+TL+  Y        A  
Sbjct: 676 --------TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEARE 727

Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG-----FDSNLE 358
           +++ M     +  + T+  ++D  CKA     AR   E++++I      FD  L+
Sbjct: 728 VVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAR---EFLSEISDTDQNFDQKLQ 779



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 3/246 (1%)

Query: 6   STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
           S  LL  C      A  +E  E  +  G    + P  V    L+ A  +    +      
Sbjct: 533 SYSLLLQCYAKGGNAAGIESIEKEVYVGT---IFPSWVILRTLVIANFKCRRLEGVEKAF 589

Query: 66  NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
             ++  G  PD+V +NS++A   +N L S + ++ D + + G+ PD+ +YNSLM    + 
Sbjct: 590 QEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKS 649

Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
            +  EA ++ + +    + P   ++N ++NG CK      A R+   +   G  P +VTY
Sbjct: 650 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTY 709

Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
           + L+ G         AR ++  +      P  +TY  ++    + ++Y    E LS +  
Sbjct: 710 HTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769

Query: 246 KGYTFD 251
               FD
Sbjct: 770 TDQNFD 775



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 7/238 (2%)

Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK-RK 246
           L+K L  +G    A  +L+   D G A +A     +++   R  ++ +  ++L  M    
Sbjct: 116 LLKALELSGHWEWALALLRWASDEGAA-DAAALEMVVRALGREGQHDVVCDLLDEMPLPP 174

Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
           G   D   Y TV+ A  + GR + A     ++   GV   IV+YN ++++Y + G+    
Sbjct: 175 GSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPR 234

Query: 307 YL-LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
            + LL+EM   G E D +T + +I    + G +  A    E +   G    +  YN ++ 
Sbjct: 235 IVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294

Query: 366 RLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
             GK G    A+ V + ME      D+ TY+ +     +A     A+K L +    G+
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGL 352


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.139    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,777,245,795
Number of Sequences: 23463169
Number of extensions: 276685183
Number of successful extensions: 1071183
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8282
Number of HSP's successfully gapped in prelim test: 4305
Number of HSP's that attempted gapping in prelim test: 821869
Number of HSP's gapped (non-prelim): 84743
length of query: 456
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 310
effective length of database: 8,933,572,693
effective search space: 2769407534830
effective search space used: 2769407534830
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)