BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012800
(456 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C043|PP318_ARATH Putative pentatricopeptide repeat-containing protein At4g17915
OS=Arabidopsis thaliana GN=At4g17915 PE=3 SV=1
Length = 463
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/456 (53%), Positives = 327/456 (71%), Gaps = 2/456 (0%)
Query: 2 FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
F LSTRLLNICV + CK +LEKAE++IIDGIRLGV PDVVTYN LI YC+FV +
Sbjct: 8 FTGLSTRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEA 67
Query: 62 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
Y + RMR+AGI PDV TYNSLIAGA R +L L L DEMLE GI PD+WSYN+LM C
Sbjct: 68 YAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCC 127
Query: 122 LFQLGKPDEANRV-FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
F+LGK +EA RV ++D+ L P T+N++L+ LCK Y DNAL +F+ +Q F P
Sbjct: 128 YFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKP 186
Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
EL+TYNILI GLCK+ R+ TA+W+L EL SG+ PNA+TYTTI+K F+ R+ + GL++
Sbjct: 187 ELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLF 246
Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
MKR+GYT+DG+ Y V++A +K GR KEA +YM+++V G + DIVSYNTL+NLY K+
Sbjct: 247 LEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKD 306
Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
G L+A LL E+E++G + D+YTHTI+++GL + G + A H M ++G NL
Sbjct: 307 GNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTC 366
Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
NC+VD L K G +D A+ FESMEVKD +TY+S+VHNLCK R ASKLLLSC G++
Sbjct: 367 NCLVDGLCKAGHVDRAMRYFESMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIK 426
Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
I SA++AV+ GLR SGC EA+K ++++++ + +
Sbjct: 427 IPTSARRAVLSGLRMSGCYGEARKAKAEMKLTLVGN 462
>sp|Q56XR6|PP421_ARATH Pentatricopeptide repeat-containing protein At5g46680
OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2
Length = 468
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/453 (49%), Positives = 316/453 (69%), Gaps = 3/453 (0%)
Query: 2 FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
F +ST+LLNI V + CK LE+AE ++IDGIRLGVLPDV+TYN LI Y +F+ D
Sbjct: 8 FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 62 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHC 121
Y + RMREAGI PDV TYNSLI+GA +N +L+ L L DEML G+ PD+WSYN+LM C
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 122 LFQLGKPDEANRVF-QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
F+LG+ EA ++ +D+ L P T+NI+L+ LCK+ +TDNA+ +F+ L K P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKP 186
Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
EL+TYNILI GLCK+ R+ + W+++EL SG+ PNA+TYTT++K F+ ++ + GL++
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQ-LDIVSYNTLINLYCK 299
MK++GYTFDGF C V++A +K GR +EA + M ++V G + DIVSYNTL+NLY K
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
+G L+A LL+E+E +G + D YTHTI+++GL GN GA HL + ++G ++
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Query: 360 YNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
NC++D L K G +D A+ +F SMEV+D FTY+S+VHNLCK RL ASKLLLSC G+
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Query: 420 RILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
+I SA++AV+ G+R + + A+K KI+ A
Sbjct: 427 KIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 233/434 (53%), Gaps = 15/434 (3%)
Query: 17 FCKANRLEKAEAI--IIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS 74
FC+ + KA I I++G G +PDV+TYN++I YC+ + ++L+RM +S
Sbjct: 147 FCRLGKTRKAAKILEILEGS--GAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVS 201
Query: 75 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
PDVVTYN+++ + L ++++LD ML+ PDV +Y L+ + A ++
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
+M TP T+N+++NG+CK D A++ + G P ++T+NI+++ +C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDG 252
GR A +L ++ G +P+ +T+ ++ F RK LG ++IL M + G +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILIN--FLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 253 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
Y ++ F K ++ A +Y+E+MV+ G DIV+YNT++ CK+GK+E A +L++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
+ +G T+ +IDGL KAG A L+ M + Y+ +V L ++GK
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 373 IDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
+D AI F E ++ T++S++ LCK+++ A L+ + G + +++
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 429 VVDGLRHSGCRREA 442
+++GL + G +EA
Sbjct: 560 LIEGLAYEGMAKEA 573
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 7/377 (1%)
Query: 78 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
V N+ + R L L+ M+ G PD+ +L+ +LGK +A ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
+ P T+N+M++G CK +NAL + L + P++VTYN +++ LC +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
L+ A +L + P+ ITYT +++ R+ +++L M+ +G T D Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 317
++ K GRL EA ++ M + G Q +++++N ++ C G+ A LL +M ++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 318 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
F T ILI+ LC+ G + A LE M + G N +YN ++ K+ K+D AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
E M + D TY++M+ LCK ++ A ++L G + V+DGL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 434 RHSGCRREAKKIQSKIR 450
+G +A K+ ++R
Sbjct: 460 AKAGKTGKAIKLLDEMR 476
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 158/309 (51%), Gaps = 16/309 (5%)
Query: 111 DVWSYNSLMHCLFQLGKPDEANRVFQDMI----CGDLTPCTATFNIMLNGLCKNRYTDNA 166
DV S N L + + G+ +E + ++M+ D+ PCT ++ G C+ T A
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTT----LIRGFCRLGKTRKA 156
Query: 167 LRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC 226
++ L+ G VP+++TYN++I G CKAG + A +L + S P+ +TY TI++
Sbjct: 157 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRS 213
Query: 227 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 286
+ K K +E+L M ++ D Y +I A + + A +++M G D
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
+V+YN L+N CKEG+L+ A L++M G + + TH I++ +C G A L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
M + GF ++ +N +++ L + G + AI++ E M +S +Y+ ++H CK K
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 403 RLPSASKLL 411
++ A + L
Sbjct: 394 KMDRAIEYL 402
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
V L+ V N + + G+LE + L+ M G D T LI G C+ G
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-DSFTYSSMVHN 397
+ A LE + G ++ YN ++ K G+I++A++V + M V D TY++++ +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 398 LCKAKRLPSASKLL 411
LC + +L A ++L
Sbjct: 214 LCDSGKLKQAMEVL 227
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
PDV YN LI+ +C+ D +L+RMR SPD VTYN +I L +L +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
L+++L P V +Y L+ G DEA ++ +M+ L P T+N ++ G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
D A M R L+ G P++++YNIL++ L G+ ++ ++ PN +T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y+ ++ R+ K + + +L MK KG T D + Y +IAAF + GRL A +++E M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN-I 338
+DG DIV+YNT++ CK GK + A + ++ + G + ++ + L +G+ I
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVKDS-FTYSSM 394
+ + LE M+ G D + YN ++ L ++G +D A + M E S TY+ +
Sbjct: 456 RALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAK 453
+ CKA R+ A +L S + +G R ++ +++G+ +G R EA ++ + +R+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA 574
Query: 454 ISH 456
IS
Sbjct: 575 ISE 577
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 179/361 (49%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + + C +L+ A ++ + P V+TY +LI+A D +++ M
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD+ TYN++I G + ++ + +++ + G PDV SYN L+ L GK +E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
++ M P T++I++ LC++ + A+ + + +++ G P+ +Y+ LI
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
C+ GRL A L+ + G P+ + Y T++ +N K LEI + G +
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
+ Y T+ +A G A + +M+++G+ D ++YN++I+ C+EG ++ A+ LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
+M F T+ I++ G CKA I+ A LE M G N Y +++ +G
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Query: 371 G 371
G
Sbjct: 557 G 557
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + + E+ E ++ P+VVTY++LI C+ + +L M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G++PD +Y+ LIA R L +++ L+ M+ G PD+ +YN+++ L + GK D+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A +F + +P ++++N M + L + AL M + +G P+ +TYN +I
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC+ G + A +L ++ P+ +TY ++ + + + + +L +M G
Sbjct: 482 CLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
+ Y +I G EA ++ D V++D +S
Sbjct: 542 NETTYTVLIEGIGFAGYRAEAM----ELANDLVRIDAIS 576
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 35/203 (17%)
Query: 14 VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAG- 72
+ FC+ RL+ A + I G LPD+V YN ++ C+ D I ++ E G
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 73 ----------------------------------ISPDVVTYNSLIAGATRNSLLSCSLD 98
I PD +TYNS+I+ R ++ + +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
LL +M P V +YN ++ + + ++A V + M+ P T+ +++ G+
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 159 KNRYTDNALRMFRGLQKHGFVPE 181
Y A+ + L + + E
Sbjct: 555 FAGYRAEAMELANDLVRIDAISE 577
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 221/429 (51%), Gaps = 39/429 (9%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + +CK R + A ++ GV DV TYNMLI C+ GY +L MR+
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
I P+ VTYN+LI G + + + LL+EML G+ P+ ++N+L+ G E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNA----LRMFR--------------- 171
A ++F M LTP ++ ++L+GLCKN D A +RM R
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 172 GLQKHGFV----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
GL K+GF+ P++VTY+ LI G CK GR +TA+ I+ + G +P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
N I Y+T++ C R K + I AM +G+T D F + ++ + K G++ EA ++M
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
M +DG+ + VS++ LIN Y G+ A+ + DEM K G +T+ L+ GLCK
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
G+++ A L+ ++ + + YN ++ + K G + A+++F M + DS+TY
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 392 SSMVHNLCK 400
+S++ LC+
Sbjct: 652 TSLISGLCR 660
Score = 184 bits (468), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 198/408 (48%), Gaps = 4/408 (0%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
NI + C EK+ ++ + G P +VTYN ++ YC+ F A +L+ M+
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
G+ DV TYN LI R++ ++ LL +M + I P+ +YN+L++ GK
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
A+++ +M+ L+P TFN +++G AL+MF ++ G P V+Y +L+
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
GLCK AR + +G ITYT ++ +N + +L+ M + G
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y +I F K+GR K A + + ++ G+ + + Y+TLI C+ G L+ A +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+ M +G D +T +L+ LCKAG + A + M G N +++C+++ G
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555
Query: 370 DGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
G+ A +VF+ M FTY S++ LCK L A K L S
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 15/469 (3%)
Query: 1 MFGKLST--RLLNICVCTFCKANRLEKAEAIIIDGIRL-------GVLPDVVTYNMLIDA 51
+FG L T RL N + R+ E +I D + + G P V T N ++ +
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167
Query: 52 YCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
+ + ++ L M + I PDV T+N LI S L+ +M + G P
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227
Query: 112 VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
+ +YN+++H + G+ A + M + T+N++++ LC++ + R
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNR 231
++K P VTYN LI G G++ A +L E+ G +PN +T+ ++
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347
Query: 232 KYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 291
+K L++ M+ KG T Y ++ K A + +M +GV + ++Y
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407
Query: 292 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 351
+I+ CK G L+ A +LL+EM K G + D T++ LI+G CK G K A+ + + ++
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 352 GFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSA 407
G N Y+ ++ + G + AI ++E+M +D FT++ +V +LCKA ++ A
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527
Query: 408 SKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
+ + G+ + +++G +SG +A + + M K+ H
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE--MTKVGH 574
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 5/408 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
CK + A + R GV +TY +ID C+ D +LN M + GI PD
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
+VTY++LI G + + +++ + +G+ P+ Y++L++ ++G EA R+++
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
MI T TFN+++ LCK A R + G +P V+++ LI G +G
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
A + E+ GH P TY +++K + + + L ++ D Y
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
T++ A K G L +A +MV + D +Y +LI+ C++GK A L E E +
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677
Query: 317 G-FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
G +K +T +DG+ KAG K E M+ +G ++ N ++D + GKI+
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737
Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
++ M ++ TY+ ++H K K + ++ L S + +G+
Sbjct: 738 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 197/445 (44%), Gaps = 27/445 (6%)
Query: 5 LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
+ T + N + CK+ L KA ++ + ++ +LPD TY LI C+ G T+
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTV 665
Query: 65 LNRM--REA----GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSL 118
+ + +EA + P+ V Y + G + + ++M +G PD+ + N++
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 119 MHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
+ ++GK ++ N + +M + P T+NI+L+G K + + ++R + +G
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE 238
+P+ +T + L+ G+C++ L ILK G + T+ ++ C N + +
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845
Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
++ M G + D +++ + R +E+ + +M G+ + Y LIN C
Sbjct: 846 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 358
+ G ++ A+++ +EM + ++ L K G A L L +M K+ +
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIA 965
Query: 359 AYNCIVDRLGKDGKIDHAINVFESMEVK----------DSFTYSSMVHNLCKAKRLPSAS 408
++ ++ K+G NV E++E++ D +Y+ ++ LC + A
Sbjct: 966 SFTTLMHLCCKNG------NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1019
Query: 409 KLLLSCLKSGVRILKSAQKAVVDGL 433
+L G + KA++ GL
Sbjct: 1020 ELYEEMKGDGFLANATTYKALIRGL 1044
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 7 TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
T L+++C CK + +A + + G+ D+V+YN+LI C + +
Sbjct: 968 TTLMHLC----CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023
Query: 67 RMREAGISPDVVTYNSLIAG-ATRNSLLSCSLDLLDEMLEMG 107
M+ G + TY +LI G R + S + +L ++L G
Sbjct: 1024 EMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1065
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 230/444 (51%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
+I + FC+ ++L A A++ ++LG PD+VT + L++ YC ++++M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD T+ +LI G ++ S ++ L+D+M++ G PD+ +Y ++++ L + G D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + + M G + +N +++GLCK ++ D+AL +F + G P++ TY+ LI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T++ ++ + K ++ M ++
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D F Y ++I F RL EA E M++ ++V+Y+TLI +CK ++E L
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+T LI G +A + A++ + M +G N+ YN ++D L K+
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK+ A+ VFE ++ D +TY+ M+ +CKA ++ +L + GV A
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ G G + EA + K++
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMK 565
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 184/369 (49%), Gaps = 1/369 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ N + CK ++ A + + G+ PDV TY+ LI C + + +L+ M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
E I+P+VVT+++LI + L + L DEM++ I PD+++Y+SL++ +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
DEA +F+ MI D P T++ ++ G CK + + + +FR + + G V VTY L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I G +A A+ + K++ G PN +TY ++ +N K + + ++R
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D + Y +I K G++++ + + GV ++++YNT+I+ +C++G E A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
LL +M++ G + T+ LI + G+ + + ++ M GF + + + L
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML- 618
Query: 369 KDGKIDHAI 377
DG++D +
Sbjct: 619 HDGRLDKSF 627
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 206/420 (49%), Gaps = 4/420 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+++ A + D ++ P +V +N L+ A + F+ ++ +M+ GIS D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
I R S LS +L +L +M+++G PD+ + +SL++ + +A + M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
P T TF +++GL + A+ + + + G P+LVTY ++ GLCK G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+LK++ + + Y TI+ + + L + + M KG D F Y ++I+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
GR +A+ + M+ + ++V+++ LI+ + KEGKL A L DEM K+ + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+T++ LI+G C + A+ E M N+ Y+ ++ K +++ + +F
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
M V ++ TY++++H +A+ +A + + GV ++DGL +G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 181/398 (45%), Gaps = 35/398 (8%)
Query: 21 NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
N+ +A A++ ++ G PD+VTY +++ C+ D ++L +M + I DVV Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 81 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
N++I G + + +L+L EM GI PDV++Y+SL+ CL G+ +A+R+ DMI
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 141 GDLTPCTATFNIML-----------------------------------NGLCKNRYTDN 165
+ P TF+ ++ NG C + D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 166 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 225
A MF + P +VTY+ LIKG CKA R+ + +E+ G N +TYTT++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 226 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 285
F+ R + M G + Y ++ K G+L +A E + ++
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 286 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 345
DI +YN +I CK GK+E + L + +G + + +I G C+ G+ + A L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 346 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
+ M + G N YN ++ +DG + + + + M
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
K D+A +F DM+ P FN +L+ + K + + + +Q G +L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
I I C+ +L A +L ++ G+ P+ +T ++++ +++ + ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
GY D F + T+I + EA ++QMV G Q D+V+Y T++N CK G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
LL +MEK E D + +IDGLCK +
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKH----------------------------- 273
Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
+D A+N+F M+ K D FTYSS++ LC R AS+LL ++ +
Sbjct: 274 ------MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
A++D G EA+K+ ++
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEM 354
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 115/225 (51%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FCKA R+E+ + + + G++ + VTY LI + Q D + +M G+ P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
++TYN L+ G +N L+ ++ + + + + PD+++YN ++ + + GK ++ +F
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
++ ++P +N M++G C+ + A + + +++ G +P TYN LI+ + G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ ++KE+ G A +A T + R K L++LS
Sbjct: 588 DREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 390
A ++ M + G +L Y +V+ L K G ID A+++ + ME D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
Y++++ LCK K + A L G+R +++ L + G +A ++ S +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 451 MAKIS 455
KI+
Sbjct: 321 ERKIN 325
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + CK +L KA + R + PD+ TYN++I+ C+ + G+ + +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+SP+V+ YN++I+G R + LL +M E G P+ +YN+L+ + G +
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 131 ANRVFQDM----ICGDLTPCTATFNIMLNGLCKNRYTD 164
+ + ++M GD + N++ +G + D
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLD 629
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 227/444 (51%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
+I + FC+ ++L A A++ ++LG P++VT + L++ YC ++++M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G P+ VT+N+LI G ++ S ++ L+D M+ G PD+ +Y +++ L + G D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M G L P +N +++GLCK ++ D+AL +F+ ++ G P +VTY+ LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + P+ T++ ++ + K ++ M ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
Y ++I F RL EA E MV+ D+V+YNTLI +CK ++E +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+ ILI GL +AG+ A+ + M G N+ YN ++D L K+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VFE ++ +TY+ M+ +CKA ++ L + GV+ A
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ G G + EA + +++
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMK 563
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 191/377 (50%), Gaps = 3/377 (0%)
Query: 3 GKLSTRLL--NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
GKL +L N + CK ++ A + + G+ P+VVTY+ LI C + +
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 61 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMH 120
+L+ M E I+PDV T+++LI + L + L DEM++ I P + +Y+SL++
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
+ DEA ++F+ M+ P T+N ++ G CK + + + +FR + + G V
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
VTYNILI+GL +AG A+ I KE+ G PN +TY T++ +N K + + +
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
++R + Y +I K G++++ D + GV+ D+V+YNT+I+ +C++
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
G E A L EM++ G + + LI + G+ + + ++ M GF +
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 361 NCIVDRLGKDGKIDHAI 377
+ + L DG++D +
Sbjct: 610 GLVTNML-HDGRLDKSF 625
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 173/345 (50%), Gaps = 2/345 (0%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
P V+ YN +ID C++ D + M GI P+VVTY+SLI+ S + L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
L +M+E I PDV+++++L+ + GK EA +++ +M+ + P T++ ++NG C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 160 NRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
+ D A +MF + KH F P++VTYN LIKG CK R+ + +E+ G N +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
TY +++ F+ + EI M G + Y T++ K G+L++A E +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
++ I +YN +I CK GK+E + L + +G + D + +I G C+ G+
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
+ A + M + G N YN ++ +DG + + + + M
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 176/386 (45%), Gaps = 4/386 (1%)
Query: 56 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
+ D + M ++ P ++ ++ L++ + + + L ++M +GIP + ++Y
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
+ L++C + + A V M+ P T + +LNG C ++ A+ + +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
G+ P VT+N LI GL + A ++ + G P+ +TY ++ + L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
+L+ M++ Y T+I K + +A + ++M T G++ ++V+Y++LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
C G+ A LL +M ++ D +T + LID K G + A + M K D
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
++ Y+ +++ ++D A +FE M K D TY++++ CK KR+ ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSG 437
+ G+ ++ GL +G
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 114/231 (49%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCK R+E+ + + + G++ + VTYN+LI Q D I M
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ P+++TYN+L+ G +N L ++ + + + + P +++YN ++ + + GK ++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F ++ + P +N M++G C+ + A +F+ +++ G +P YN LI+
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + ++KE+ G A +A T + R K L++LS
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 133/301 (44%), Gaps = 32/301 (10%)
Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
NGL + + D+A+ +F + K P ++ ++ L+ + K + + +++ + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
N TY+ ++ C R + L L +L M + GY + +++ + R+ EA
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
++QM G Q + V++NTLI+ K A L+D M +G + D T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSM 394
G+ L +NK+ + GK++ + Y+++
Sbjct: 234 RGDTD---LAFNLLNKM-----------------EQGKLEPGV-----------LIYNTI 262
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
+ LCK K + A L G+R +++ L + G +A ++ S + KI
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 455 S 455
+
Sbjct: 323 N 323
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 220/489 (44%), Gaps = 54/489 (11%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + FC A ++ A + G LP+VVTYN LID YC+ D G+ +L M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 71 AGISP-----------------------------------DVVTYNSLIAGATRNSLLSC 95
G+ P D VTYN+LI G +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 96 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
+L + EML G+ P V +Y SL+H + + G + A M L P T+ +++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
G + Y + A R+ R + +GF P +VTYN LI G C G++ A +L+++ + G +P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
+ ++Y+T++ R+ L + M KG D Y ++I F + R KEA D
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
E+M+ G+ D +Y LIN YC EG LE A L +EM ++G D T+++LI+GL K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 336 GNIKGAR---LHLEYMNKIGFD----------SNLEAYNCI--VDRLGKDGKIDHAINVF 380
+ A+ L L Y + D SN+E + + + G + A VF
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 381 ESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
ESM K D Y+ M+H C+A + A L +KSG + A+V L
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Query: 437 GCRREAKKI 445
G E +
Sbjct: 689 GKVNELNSV 697
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 229/452 (50%), Gaps = 11/452 (2%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQF---VSFDAGY 62
++ + ++ V ++ + + ++KA +I+ G +P V++YN ++DA + +SF
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF--AE 190
Query: 63 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
+ M E+ +SP+V TYN LI G + +L L D+M G P+V +YN+L+
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
+L K D+ ++ + M L P ++N+++NGLC+ + + + G+ +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
VTYN LIKG CK G A + E+ G P+ ITYT+++ + +E L
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
M+ +G + Y T++ F + G + EA + +M +G +V+YN LIN +C GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYN 361
+E A +L++M+++G D +++ ++ G C++ ++ A R+ E + K G + Y+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYS 489
Query: 362 CIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
++ + + A +++E M D FTY+++++ C L A +L ++
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
GV +++GL REAK++ K+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 175/353 (49%), Gaps = 21/353 (5%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G P VVTYN LI+ +C + +L M+E G+SPDVV+Y+++++G R+ + +
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
L + EM+E GI PD +Y+SL+ + + EA ++++M+ L P T+ ++N
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
C + AL++ + + G +P++VTY++LI GL K R R A+ +L +L P+
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
+TY T+++ C N ++K ++I F G + EA E
Sbjct: 590 DVTYHTLIENC-SNIEFK-------------------SVVSLIKGFCMKGMMTEADQVFE 629
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
M+ + D +YN +I+ +C+ G + AY L EM K GF T L+ L K G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 389
+ + ++ + S E +V+ ++G +D ++V M KD F
Sbjct: 690 KVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEM-AKDGF 741
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 15/253 (5%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC+ R ++A + + +R+G+ PD TY LI+AYC + + N M E G+ PD
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEML-EMGIPPDVWSYN--------------SLMHC 121
VVTY+ LI G + S + LL ++ E +P DV + SL+
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
G EA++VF+ M+ + P +NIM++G C+ A +++ + K GF+
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
VT L+K L K G++ ++ + S A +++ R + L++L+
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 242 AMKRKGYTFDGFG 254
M + G+ +G
Sbjct: 735 EMAKDGFLPNGIS 747
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
+I + FC+ ++L A A++ ++LG PD+VT N L++ +C +++ +M E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD T+N+LI G R++ S ++ L+D M+ G PD+ +Y +++ L + G D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + + M G + P +N +++ LC + ++AL +F + G P +VTYN LI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T++ ++ + K ++ M ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D F Y ++I F RL EA E M++ ++V+YNTLI +CK +++ L
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+T LI G +A A++ + M G ++ Y+ ++D L +
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ G G + EA + +++
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMK 563
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 202/390 (51%), Gaps = 4/390 (1%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N + + NR +A A++ + G PD+VTY ++++ C+ D ++L +M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
+ I P VV YN++I ++ +L+L EM GI P+V +YNSL+ CL G+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+A+R+ DMI + P TF+ +++ K A +++ + K P++ TY+ LI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G C RL A+ + + + PN +TY T++K + ++ G+E+ M ++G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+ Y T+I F + A +QMV+DGV DI++Y+ L++ C GK+E A ++
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+ +++ E D YT+ I+I+G+CKAG ++ ++ G N+ Y ++ +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 370 DGKIDHAINVFESME----VKDSFTYSSMV 395
G + A +F M+ + DS TY++++
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 207/420 (49%), Gaps = 4/420 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+L+ A + D ++ P +V ++ L+ A + FD ++ +M+ GIS ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
LI R S LS +L +L +M+++G PD+ + NSL++ + +A + M+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
P + TFN +++GL ++ A+ + + G P+LVTY I++ GLCK G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+LK++ P + Y TI+ + L + + M KG + Y ++I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
GR +A+ + M+ + ++V+++ LI+ + KEGKL A L DEM K+ + D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+T++ LI+G C + A+ E M N+ YN ++ K ++D + +F
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
M V ++ TY++++H +A+ +A + + GV ++DGL ++G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 1/369 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ N + C + A + + G+ P+VVTYN LI C + + +L+ M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
E I+P+VVT+++LI + L + L DEM++ I PD+++Y+SL++ +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
DEA +F+ MI D P T+N ++ G CK + D + +FR + + G V VTY L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I G +A A+ + K++ G P+ +TY+ ++ N K + L + ++R
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D + Y +I K G++++ D + GV+ ++V+Y T+++ +C++G E A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
L EM+++G D T+ LI + G+ + + M F + + + L
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML- 616
Query: 369 KDGKIDHAI 377
DG++D +
Sbjct: 617 HDGRLDKSF 625
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 4/290 (1%)
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
D+A+ +F + K P +V ++ L+ + K + + +++ + G + N TY+ +
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
+ C R + L L +L+ M + GY D +++ F R+ +A + QMV G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
Q D ++NTLI+ + + A L+D M +G + D T+ I+++GLCK G+I A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
L+ M + + + YN I+D L ++ A+N+F M+ K + TY+S++ LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 113/231 (48%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCKA R+++ + + + G++ + VTY LI + Q D + +M
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD++TY+ L+ G N + +L + + + + PD+++YN ++ + + GK ++
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F + + P T+ M++G C+ + A +FR +++ G +P+ TYN LI+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + +++E+ +A T + R K L++LS
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 210/415 (50%), Gaps = 5/415 (1%)
Query: 36 LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
LG+ ++ TY++ I+ +C+ IL +M + G P +VT NSL+ G + +S
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 96 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
++ L+D+M+EMG PD ++ +L+H LFQ K EA + + M+ P T+ ++N
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
GLCK D AL + ++K ++V YN +I GLCK + A + ++ G P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
+ TY ++ C ++ +LS M K D + +I AFVK G+L EA
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 276 EQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
++MV + D+V+YNTLI +CK ++E + EM ++G + T+T LI G +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FT 390
A + A++ + M G ++ YN ++D L +G ++ A+ VFE M+ +D T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
Y++M+ LCKA ++ L S GV+ ++ G G + EA +
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 212/413 (51%), Gaps = 5/413 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
+I + FC+ ++L A AI+ ++LG P +VT N L++ +C ++++M E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD VT+ +L+ G +++ S ++ L++ M+ G PD+ +Y ++++ L + G+PD
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M G + +N +++GLCK ++ D+A +F ++ G P++ TYN LI
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + P+ + + ++ + K ++ M + + F
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 251 -DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y T+I F K R++E + +M G+ + V+Y TLI+ + + + A ++
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+M G D T+ IL+DGLC GN++ A + EYM K ++ Y +++ L K
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
GK++ ++F S+ +K + TY++M+ C+ A L + + G
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 193/394 (48%), Gaps = 1/394 (0%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
LN + FC NR+ +A A++ + +G PD VT+ L+ Q ++ RM
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 207
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
G PD+VTY ++I G + +L+LL++M + I DV YN+++ L + D
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+A +F M + P T+N +++ LC +A R+ + + P+LV +N LI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 190 KGLCKAGRLRTARWILKELGDSGHA-PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
K G+L A + E+ S H P+ + Y T++K + ++ + G+E+ M ++G
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
+ Y T+I F + A +QMV+DGV DI++YN L++ C G +E A +
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
+ + M+K+ + D T+T +I+ LCKAG ++ ++ G N+ Y ++
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAK 402
+ G + A +F M+ S + L +A+
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 168/338 (49%), Gaps = 2/338 (0%)
Query: 41 DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
DVV YN +ID C++ D + + N+M GI PDV TYN LI+ S + LL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI-CGDLTPCTATFNIMLNGLCK 159
+MLE I PD+ +N+L+ + GK EA +++ +M+ P +N ++ G CK
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
+ + + +FR + + G V VTY LI G +A A+ + K++ G P+ +T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y ++ N + L + M+++ D Y T+I A K G++++ D +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
GV+ ++V+Y T+++ +C++G E A L EM++ G + T+ LI + G+
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
+ ++ M GF + + + + L DG++D +
Sbjct: 549 ASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 162/325 (49%), Gaps = 1/325 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ N + CK ++ A + G+ PDV TYN LI C + + +L+ M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMG-IPPDVWSYNSLMHCLFQLGK 127
E I+PD+V +N+LI + L + L DEM++ PDV +YN+L+ + +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
+E VF++M L T T+ +++G + R DNA +F+ + G P+++TYNI
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
L+ GLC G + TA + + + + +TYTT+++ + K + G ++ ++ KG
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
+ Y T+++ F + G +EA +M DG + +YNTLI ++G A+
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 308 LLLDEMEKQGFECDKYTHTILIDGL 332
L+ EM GF D T ++ + L
Sbjct: 552 ELIKEMRSCGFAGDASTFGLVTNML 576
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCK R+E+ + + + G++ + VTY LI + Q D + +M
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD++TYN L+ G N + +L + + M + + D+ +Y +++ L + GK ++
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F + + P T+ M++G C+ + A +F +++ G +P TYN LI+
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + ++KE+ G A +A T+ + R K L++LS
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 267 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 326
+L +A MV IV ++ L++ K K + L ++M+ G + YT++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 327 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 383
I I+ C+ + A L M K+G+ ++ N +++ +I A+ + + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 384 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 442
D+ T++++VH L + + A L+ + G + AV++GL G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 443 KKIQSKIRMAKIS 455
+ +K+ KI
Sbjct: 235 LNLLNKMEKGKIE 247
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + FC+ +++ A A++ ++LG P +VT + L++ YC ++++M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD +T+ +LI G ++ S ++ L+D M++ G P++ +Y +++ L + G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M + FN +++ LCK R+ D+AL +F+ ++ G P +VTY+ LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T+ ++ + K+ ++ M ++
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D F Y +++ F RL +A E MV+ D+V+YNTLI +CK ++E L
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM +G D T+T LI GL G+ A+ + M G ++ Y+ ++D L +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 371 GKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VF+ M E+K D + Y++M+ +CKA ++ L S GV+
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ GL +EA + K++
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMK 567
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 46/379 (12%)
Query: 21 NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
N L K EA I+ DVV +N +ID+ C++ D + M GI P+VVTY
Sbjct: 246 NLLNKMEAAKIEA-------DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 81 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
+SLI+ S + LL +M+E I P++ ++N+L+ + GK EA +++ DMI
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
+ P T+N ++NG C + D A +MF + P++VTYN LIKG CK+ R+
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
+ +E+ G + +TYTT+++ F +
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHD------------------------------ 448
Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
G A +QMV+DGV DI++Y+ L++ C GKLE A + D M+K +
Sbjct: 449 -----GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
D Y +T +I+G+CKAG + ++ G N+ YN ++ L + A +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 381 ESME----VKDSFTYSSMV 395
+ M+ + +S TY++++
Sbjct: 564 KKMKEDGPLPNSGTYNTLI 582
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 187/368 (50%), Gaps = 1/368 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ N + + CK ++ A + + G+ P+VVTY+ LI C + + +L+ M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
E I+P++VT+N+LI + + L D+M++ I PD+++YNSL++ +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
D+A ++F+ M+ D P T+N ++ G CK++ ++ +FR + G V + VTY L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I+GL G A+ + K++ G P+ +TY+ ++ N K + LE+ M++
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D + Y T+I K G++ + D + GV+ ++V+YNT+I+ C + L+ AY
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
LL +M++ G + T+ LI + G+ + + M F + + + L
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 620
Query: 369 KDGKIDHA 376
DG++D +
Sbjct: 621 HDGRLDKS 628
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 200/420 (47%), Gaps = 4/420 (0%)
Query: 39 LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
LP +V +N L+ A + FD ++ +M+ I + TYN LI R S +S +L
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
LL +M+++G P + + +SL++ + +A + M+ P T TF +++GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
+ A+ + + + G P LVTY +++ GLCK G A +L ++ + + +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
+ TI+ + R L + M+ KG + Y ++I+ GR +A+ + M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
+ + ++V++N LI+ + KEGK A L D+M K+ + D +T+ L++G C +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
A+ E+M ++ YN ++ K +++ +F M V D+ TY+++
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
+ L +A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCK+ R+E + + G++ D VTY LI D + +M
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD++TY+ L+ G N L +L++ D M + I D++ Y +++ + + GK D+
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F + + P T+N M++GLC R A + + +++ G +P TYN LI+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + +++E+ +A T + R K L++LS
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 634
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
I+ NGL + D+A+ +F G+ K +P +V +N L+ + K + + +++
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
TY ++ C R + L L +L M + GY
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 151
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
+ IV+ ++L+N YC ++ A L+D+M + G+ D T T LI G
Sbjct: 152 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
L A ++ M + G NL Y +V+ L K G D A+N+ ME D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
+++++ +LCK + + A L G+R +++ L G +A ++ S
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 448 KIRMAKIS 455
+ KI+
Sbjct: 320 DMIEKKIN 327
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 225/444 (50%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + C+ ++L A AI+ ++LG P +VT N L++ +C ++++M E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD VT+ +L+ G +++ S ++ L++ M+ G PD+ +Y ++++ L + G+PD
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M G + ++ +++ LCK R+ D+AL +F + G P++ TY+ LI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T+ +++ + K ++ M ++
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
+ Y ++I F RL EA MV+ D+V+YNTLIN +CK K+ L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
+M ++G + T+T LI G +A + A++ + M G N+ YN ++D L K+
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VFE ++ D +TY+ M +CKA ++ L S GV+ A
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ G G + EA + K++
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMK 547
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 201/381 (52%), Gaps = 4/381 (1%)
Query: 19 KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
+ N+ +A A++ + G PD+VTY +I+ C+ D +LN+M + I DVV
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 79 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
Y+++I + + +L+L EM GI PDV++Y+SL+ CL G+ +A+R+ DM
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
+ + P TFN +++ K A ++F + + P +VTYN LI G C RL
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
A+ I + P+ +TY T++ + +K G+E+ M R+G + Y T+
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
I F + A +QMV+DGV +I++YNTL++ CK GKLE A ++ + ++K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
E D YT+ I+ +G+CKAG ++ ++ G ++ AYN ++ K G + A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 379 VFESME----VKDSFTYSSMV 395
+F M+ + DS TY++++
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLI 562
Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 182/359 (50%), Gaps = 1/359 (0%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ CK ++ A + + G+ PDV TY+ LI C + + +L+ M E I+P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
+VVT+NSLI + L + L DEM++ I P++ +YNSL++ + DEA ++F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
M+ D P T+N ++NG CK + + + +FR + + G V VTY LI G +A
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
A+ + K++ G PN +TY T++ +N K + + + +++ D + Y
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
+ K G++++ D + GV+ D+++YNT+I+ +CK+G E AY L +M++
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
G D T+ LI + G+ + ++ M F + Y + D L DG++D
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLD 606
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 209/437 (47%), Gaps = 4/437 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+L++A + + ++ P +V ++ L+ A + FD + +M G+S ++ TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
+I R S LS +L +L +M+++G P + + NSL++ + EA + M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
P T TF +++GL ++ A+ + + G P+LVTY +I GLCK G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+L ++ + + Y+T++ + R L + + M KG D F Y ++I+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
GR +A+ + M+ + ++V++N+LI+ + KEGKL A L DEM ++ + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
T+ LI+G C + A+ M ++ YN +++ K K+ + +F
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
M V ++ TY++++H +A +A + + GV ++DGL +G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 438 CRREAKKIQSKIRMAKI 454
+A + ++ +K+
Sbjct: 465 KLEKAMVVFEYLQKSKM 481
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 170/368 (46%), Gaps = 4/368 (1%)
Query: 56 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
+ D + M ++ P +V ++ L++ + + ++M +G+ ++++Y
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK 175
N +++CL + + A + M+ P T N +LNG C A+ + + +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 176 HGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKL 235
G+ P+ VT+ L+ GL + + A +++ + G P+ +TY ++ + + L
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 236 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 295
L +L+ M++ D Y TVI + K + +A + +M G++ D+ +Y++LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 296 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 355
C G+ A LL +M ++ + T LID K G + A + M + D
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 411
N+ YN +++ ++D A +F M KD TY+++++ CKAK++ +L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 412 LSCLKSGV 419
+ G+
Sbjct: 404 RDMSRRGL 411
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 1/261 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FC +RL++A+ I + LPDVVTYN LI+ +C+ G + M
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ + VTY +LI G + S + + +M+ G+ P++ +YN+L+ L + GK ++
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A VF+ + + P T+NIM G+CK ++ +F L G P+++ YN +I
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
G CK G A + ++ + G P++ TY T+++ R+ E++ M+ +
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
Query: 251 DGFGYCTVIAAFVKIGRLKEA 271
D Y ++ + GRL +
Sbjct: 589 DASTY-GLVTDMLHDGRLDKG 608
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCKA ++ + D R G++ + VTY LI + Q D + +M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ P+++TYN+L+ G +N L ++ + + + + + PD+++YN + + + GK ++
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F + + P +N M++G CK + A +F +++ G +P+ TYN LI+
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + ++KE+ A +A TY + R K LE+LS
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 10/290 (3%)
Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
F GL G+ E ++ N L+ +L A + E+ S P+ + ++ ++ +
Sbjct: 24 FSGLSYDGY-REKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAK 77
Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
+K+ L + M+ G + + + Y +I + +L A + +M+ G IV+
Sbjct: 78 MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137
Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
N+L+N +C ++ A L+D+M + G++ D T T L+ GL + A +E M
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 405
G +L Y +++ L K G+ D A+N+ ME D YS+++ +LCK + +
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257
Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
A L G+R +++ L + G +A ++ S + KI+
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 223/444 (50%), Gaps = 9/444 (2%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N+ + N + A + D + + P + T+ +++ A+C D+ ++L M +
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTK 245
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G P+ V Y +LI ++ + ++ +L LL+EM MG PD ++N ++ L + + +E
Sbjct: 246 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A ++ M+ P T+ ++NGLCK D A +F + K PE+V +N LI
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIH 361
Query: 191 GLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G GRL A+ +L ++ S G P+ TY +++ ++ L LE+L M+ KG
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+ + Y ++ F K+G++ EA + + +M DG++ + V +N LI+ +CKE ++ A +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
EM ++G + D YT LI GLC+ IK A L M G +N YN +++ +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
G+I A + M + D TY+S++ LC+A + A L L+ G +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 426 QKAVVDGLRHSGCRREAKKIQSKI 449
+++GL SG EA + Q ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEM 625
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 195/393 (49%), Gaps = 9/393 (2%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA-GISP 75
CK R++ A+ + + P++V +N LI + D +L+ M + GI P
Sbjct: 332 LCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
DV TYNSLI G + L+ +L++L +M G P+V+SY L+ +LGK DEA V
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
+M L P T FN +++ CK A+ +FR + + G P++ T+N LI GLC+
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
++ A W+L+++ G N +TY T++ R + K ++++ M +G D Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
++I + G + +A E+M+ DG +S N LIN C+ G +E A EM
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI-D 374
+G D T LI+GLC+AG I+ + G + +N ++ L K G + D
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 375 HAINVFESME---VKDSFTYSSMVHNLCKAKRL 404
+ + E +E V + T+S ++ ++ + L
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 182/381 (47%), Gaps = 9/381 (2%)
Query: 74 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANR 133
P +YN ++ + + ++ +ML IPP ++++ +M + + D A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
+ +DM P + + +++ L K + AL++ + G VP+ T+N +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
K R+ A ++ + G AP+ ITY +M + + ++ + +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI--- 355
Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDE 312
+ T+I FV GRL +A + MVT G+ D+ +YN+LI Y KEG + A +L +
Sbjct: 356 -FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 313 MEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK 372
M +G + + Y++TIL+DG CK G I A L M+ G N +NC++ K+ +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 373 IDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
I A+ +F M K D +T++S++ LC+ + A LL + GV
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 429 VVDGLRHSGCRREAKKIQSKI 449
+++ G +EA+K+ +++
Sbjct: 535 LINAFLRRGEIKEARKLVNEM 555
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K +T N + FCK +R+ +A I + R G PDV T+N LI C+
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L M G+ + VTYN+LI R + + L++EM+ G P D +YNSL+ L
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ G+ D+A +F+ M+ P + NI++NGLC++ + A+ + + G P++V
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM 224
T+N LI GLC+AGR+ + ++L G P+ +T+ T+M
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 101/198 (51%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
+T N + F + +++A ++ + + G D +TYN LI C+ D ++
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
+M G +P ++ N LI G R+ ++ +++ EM+ G PD+ ++NSL++ L +
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
G+ ++ +F+ + + P T TFN +++ LCK + +A + + GFVP T+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 186 NILIKGLCKAGRLRTARW 203
+IL++ + L R+
Sbjct: 708 SILLQSIIPQETLDRRRF 725
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFR 229
++G+ Y +LI L G +T +L ++ D G + +IM K F
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 230 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 289
+ +L LE+ + + TF Y V+ V K A + M++ + + +
Sbjct: 163 GQTTRLMLEMRNVYSCEP-TFK--SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
+ ++ +C ++++A LL +M K G + + LI L K + A LE M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 350 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 405
+G + E +N ++ L K +I+ A + M ++ D TY +++ LCK R+
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 406 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
+A L K + I + ++ G G +AK + S +
Sbjct: 340 AAKDLFYRIPKPEIVIFNT----LIHGFVTHGRLDDAKAVLSDM 379
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKE 207
+ +++ L N R+ ++ G V + + +++ KAG +T R +L+
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
P +Y +++ +K+ + M + F + V+ AF +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
+ A + M G + V Y TLI+ K ++ A LL+EM G D T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 387
+I GLCK I A + M GF + Y +++ L K G++D A ++F + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 388 SFTYSSMVHNLCKAKRLPSASKLL 411
+++++H RL A +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVL 376
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 218/447 (48%), Gaps = 12/447 (2%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + K RL + +++D + G++P+ VTYN L+ YC+ S + I+ M++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
+ PD+ TYN LI G + L+L+D M + + PDV +YN+L+ F+LG E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILI 189
A ++ + M + T NI L LCK + R + L HGF P++VTY+ LI
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
K K G L A +++E+G G N IT TI+ + RK +L++ ++G+
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y T+I F + ++++A + ++M + + ++N+LI C GK E A
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN---KIGFDSNLEAYNCIVDR 366
DE+ + G D T +I G CK G ++ A E+ N K F + N +++
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKA---FEFYNESIKHSFKPDNYTCNILLNG 600
Query: 367 LGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
L K+G + A+N F E EV D+ TY++M+ CK K+L A LL + G+
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKI 449
+ + + L G E ++ K
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 226/444 (50%), Gaps = 6/444 (1%)
Query: 5 LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
L+ L I + + + + A + D +++GV +V T+N+L++ YC + +
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM 226
Query: 65 LNRM-REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
L RM E ++PD VTYN+++ ++ LS +LL +M + G+ P+ +YN+L++
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC 286
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+LG EA ++ + M ++ P T+NI++NGLC L + ++ P++V
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV 346
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSA 242
TYN LI G + G AR +++++ + G N +T+ +K C ++ + ++
Sbjct: 347 TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
+ G++ D Y T+I A++K+G L A + M +M G++++ ++ NT+++ CKE K
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
L+ A+ LL+ K+GF D+ T+ LI G + ++ A + M K+ + +N
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 363 IVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
++ L GK + A+ F ES + D T++S++ CK R+ A + +K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 419 VRILKSAQKAVVDGLRHSGCRREA 442
+ +++GL G +A
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKA 610
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 9/419 (2%)
Query: 28 AIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGA 87
+++ + L P +++ + AY I +M + P+++T N+L+ G
Sbjct: 117 SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGL 176
Query: 88 TR---NSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG-DL 143
R + +S + ++ D+M+++G+ +V ++N L++ GK ++A + + M+ +
Sbjct: 177 VRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKV 236
Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
P T+N +L + K + + ++K+G VP VTYN L+ G CK G L+ A
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
I++ + + P+ TY ++ + GLE++ AMK D Y T+I
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECDK 322
++G EA MEQM DGV+ + V++N + CKE K EA + E+ + GF D
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416
Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
T+ LI K G++ GA + M + G N N I+D L K+ K+D A N+ S
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476
Query: 383 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
+ D TY +++ + +++ A ++ K + S +++ GL H G
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 135/292 (46%), Gaps = 24/292 (8%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K++T LN + CK +L++A ++ + G + D VTY LI + + +
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+ + M++ I+P V T+NSLI G + +++ DE+ E G+ PD ++NS++
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ G+ ++A + + I P T NI+LNGLCK T+ AL F L + V + V
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTV 626
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS-- 241
TYN +I CK +L+ A +L E+ + G P+ TY + + + K E+L
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Query: 242 -----AMKR----------------KGYTFDGFGYCTVIAAFVKIGRLKEAT 272
+MKR + + Y VI GRLKE +
Sbjct: 687 SGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHS 738
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 290 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 346
++ ++ Y EGK A + +M + + + T L+ GL + + +I AR +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVK---DSFTYSSMVHNLCKA 401
M KIG N++ +N +V+ +GK++ A+ + E M E K D+ TY++++ + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 402 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
RL +LLL K+G+ + +V G G +EA +I ++ +
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 226/437 (51%), Gaps = 8/437 (1%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
L+I + FC+ +L A + + ++LG PD V +N L++ C +++RM
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E G P ++T N+L+ G N +S ++ L+D M+E G P+ +Y +++ + + G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
A + + M ++ ++I+++GLCK+ DNA +F ++ GF +++TYN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G C AGR +L+++ +PN +T++ ++ + K + ++L M ++G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+ Y ++I F K RL+EA ++ M++ G DI+++N LIN YCK +++ L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
EM +G + T+ L+ G C++G ++ A+ + M ++ +Y ++D L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
+G+++ A+ +F +E D Y ++H +C A ++ A L S GV++ A
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 426 QKAVVDGLRHSGCRREA 442
++ L CR+++
Sbjct: 546 YNIMISEL----CRKDS 558
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 211/427 (49%), Gaps = 4/427 (0%)
Query: 32 DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
D I+ LP V+ +N L A + ++ + +M GI+ + T + +I R
Sbjct: 78 DMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCR 137
Query: 92 LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
LS + + +++++G PD +N+L++ L + EA + M+ P T N
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
++NGLC N +A+ + + + GF P VTY ++ +CK+G+ A +L+++ +
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
+A+ Y+ I+ ++ + + M+ KG+ D Y T+I F GR +
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
+ M+ + ++V+++ LI+ + KEGKL A LL EM ++G + T+ LIDG
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
CK ++ A ++ M G D ++ +N +++ K +ID + +F M ++ +
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
+ TY+++V C++ +L A KL + VR + K ++DGL +G +A +I
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 448 KIRMAKI 454
KI +K+
Sbjct: 498 KIEKSKM 504
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 184/373 (49%), Gaps = 1/373 (0%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
KL +I + CK L+ A + + G D++TYN LI +C +D G
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L M + ISP+VVT++ LI + L + LL EM++ GI P+ +YNSL+
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ + +EA ++ MI P TFNI++NG CK D+ L +FR + G + V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
TYN L++G C++G+L A+ + +E+ P+ ++Y ++ N + + LEI +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
++ D Y +I ++ +A D + GV+LD +YN +I+ C++ L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
A +L +M ++G D+ T+ ILI + A +E M GF +++ +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 364 VDRLGKDGKIDHA 376
++ L G++D +
Sbjct: 620 INMLSS-GELDKS 631
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 39/397 (9%)
Query: 41 DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
D V Y+++ID C+ S D + + N M G D++TYN+LI G LL
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
+M++ I P+V +++ L+ + GK EA+++ ++M+ + P T T+N +++G CK
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
+ A++M + G P+++T+NILI G CKA R+ + +E+ G N +TY
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
T+++ G+C + G+L+ A ++MV+
Sbjct: 442 NTLVQ----------------------------GFC-------QSGKLEVAKKLFQEMVS 466
Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
V+ DIVSY L++ C G+LE A + ++EK E D + I+I G+C A +
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVH 396
A + G + AYN ++ L + + A +F M D TY+ ++
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
+A++L+ SG S K V++ L
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
D+A+ +FR + + +P ++ +N L + K + + K++ G A + T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
+ C R RK + + + GY D + T++ R+ EA + +++MV G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
+ +++ NTL+N C GK+ A +L+D M + GF+ ++ T+ +++ +CK+G A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
L M + + Y+ I+D L KDG +D+A N+F ME+K D TY++++ C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
A R +KLL +K + ++D G REA ++
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + FC+ +++ A A++ ++LG P +VT + L++ YC ++++M E
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 108
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD +T+ +LI G ++ S ++ L+D M++ G P++ +Y +++ L + G D
Sbjct: 109 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M + FN +++ LCK R+ D+AL +F+ ++ G P +VTY+ LI
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T+ ++ + K+ ++ M ++
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D F Y ++I F RL +A E MV+ D+ +YNTLI +CK ++E L
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM +G D T+T LI GL G+ A+ + M G ++ Y+ ++D L +
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 371 GKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VF+ M E+K D + Y++M+ +CKA ++ L S GV+
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ GL +EA + K++
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMK 492
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 187/368 (50%), Gaps = 1/368 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ N + + CK ++ A + + G+ P+VVTY+ LI C + + +L+ M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
E I+P++VT+N+LI + + L D+M++ I PD+++YNSL++ +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
D+A ++F+ M+ D P T+N ++ G CK++ ++ +FR + G V + VTY L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I+GL G A+ + K++ G P+ +TY+ ++ N K + LE+ M++
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D + Y T+I K G++ + D + GV+ ++V+YNT+I+ C + L+ AY
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
LL +M++ G D T+ LI + G+ + + M F + + + L
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML- 545
Query: 369 KDGKIDHA 376
DG++D +
Sbjct: 546 HDGRLDKS 553
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 181/379 (47%), Gaps = 46/379 (12%)
Query: 21 NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
N L K EA I+ DVV +N +ID+ C++ D + M GI P+VVTY
Sbjct: 171 NLLNKMEAAKIEA-------DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 81 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
+SLI+ S + LL +M+E I P++ ++N+L+ + GK EA ++ DMI
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
+ P T+N ++NG C + D A +MF + P+L TYN LIKG CK+ R+
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
+ +E+ G + +TYTT+++ F +
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHD------------------------------ 373
Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
G A +QMV+DGV DI++Y+ L++ C GKLE A + D M+K +
Sbjct: 374 -----GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
D Y +T +I+G+CKAG + ++ G N+ YN ++ L + A +
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 381 ESME----VKDSFTYSSMV 395
+ M+ + DS TY++++
Sbjct: 489 KKMKEDGPLPDSGTYNTLI 507
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 204/420 (48%), Gaps = 4/420 (0%)
Query: 39 LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
LP + +N L+ A + FD ++ +M+ GIS ++ TYN LI R S +S +L
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
LL +M+++G P + + +SL++ + +A + M+ P T TF +++GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
+ A+ + + + G P LVTY +++ GLCK G + A +L ++ + + +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
+ TI+ + R L + M+ KG + Y ++I+ GR +A+ + M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
+ + ++V++N LI+ + KEGK A L D+M K+ + D +T+ LI+G C +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
A+ E+M +L+ YN ++ K +++ +F M V D+ TY+++
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
+ L +A K+ + GV ++DGL ++G +A ++ ++ ++I
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCK+ R+E + + G++ D VTY LI D + +M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD++TY+ L+ G N L +L++ D M + I D++ Y +++ + + GK D+
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F + + P T+N M++GLC R A + + +++ G +P+ TYN LI+
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + +++E+ +A T + R K L++LS
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 559
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
P+ + ++ + +K+ L + + M+R G + + + Y +I F + ++ A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
+ +M+ G + IV+ ++L+N YC ++ A L+D+M + G+ D T T LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
A ++ M + G NL Y +V+ L K G ID A N+ ME D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
+++++ +LCK + + A L G+R +++ L G +A ++ S +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 451 MAKIS 455
KI+
Sbjct: 248 EKKIN 252
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + FC+ +++ A A++ ++LG P +VT + L++ YC ++++M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD +T+ +LI G ++ S ++ L+D M++ G P++ +Y +++ L + G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M + ++ +++ LCK R+ D+AL +F ++ G P ++TY+ LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC R A +L ++ + PN +T+ ++ + K ++ M ++
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D F Y ++I F RL EA E M++ ++V+YNTLIN +CK +++ L
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+T LI G +A + A++ + M G N+ YN ++D L K+
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VFE ++ +TY+ M+ +CKA ++ L S GV+
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ G G + EA + K+R
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMR 567
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 214/437 (48%), Gaps = 4/437 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+L+ A + ++ LP + +N L+ A + FD ++ +M+ GIS ++ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
LI R S +S +L LL +M+++G P + + +SL++ + +A + M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
P T TF +++GL + A+ + + + G P LVTY +++ GLCK G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+L ++ + N + Y+T++ + R L + + M+ KG + Y ++I+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
R +A+ + M+ + ++V++N LI+ + KEGKL A L DEM K+ + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+T++ LI+G C + A+ E M N+ YN +++ K +ID + +F
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
M V ++ TY++++H +A+ +A + + GV ++DGL +G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 438 CRREAKKIQSKIRMAKI 454
+A + ++ +K+
Sbjct: 485 KLEKAMVVFEYLQRSKM 501
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 157/302 (51%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ CK + A + + GV P+V+TY+ LI C + + +L+ M E I+P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
+VVT+N+LI + L + L DEM++ I PD+++Y+SL++ + DEA +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
+ MI D P T+N ++NG CK + D + +FR + + G V VTY LI G +A
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
A+ + K++ G PN +TY T++ +N K + + + ++R + Y
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
+I K G++++ D + GV+ D++ YNT+I+ +C++G E A L +M +
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 316 QG 317
G
Sbjct: 569 DG 570
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC +RL++A+ + I P+VVTYN LI+ +C+ D G + M + G+ +
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VTY +LI G + + + +M+ G+ P++ +YN+L+ L + GK ++A VF+
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
+ + P T+NIM+ G+CK ++ +F L G P+++ YN +I G C+ G
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 197 RLRTARWILKELGDSGHAPNAIT 219
A + +++ + G P++ T
Sbjct: 555 LKEEADALFRKMREDGPLPDSGT 577
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 89/171 (52%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCKA R+++ + + + G++ + VTY LI + Q D + +M
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ P+++TYN+L+ G +N L ++ + + + + P +++YN ++ + + GK ++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
+F + + P +N M++G C+ + A +FR +++ G +P+
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 216/431 (50%), Gaps = 7/431 (1%)
Query: 10 LNICVCTFCKANRLEKAEAIIID-GIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+N+ V FCK R+E A I + + G PD T+N L++ C+ I++ M
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
+ G PDV TYNS+I+G + + ++++LD+M+ P+ +YN+L+ L + +
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
+EA + + + + P TFN ++ GLC R A+ +F ++ G P+ TYN+L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I LC G+L A +LK++ SG A + ITY T++ + K + EI M+ G
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
+ + Y T+I K R+++A M+QM+ +G + D +YN+L+ +C+ G ++ A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
++ M G E D T+ LI GLCKAG ++ A L + G + AYN ++ L
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 369 KDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCK-AKRLPSASKLLLSCLKSGVRIL 422
+ K AIN+F M D+ +Y + LC + A L+ L+ G
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Query: 423 KSAQKAVVDGL 433
S+ + +GL
Sbjct: 682 FSSLYMLAEGL 692
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 212/447 (47%), Gaps = 40/447 (8%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N+ + C+A++L A ++ D G++PD T+ ++ Y + D I +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 70 EAGIS------------------------------------PDVVTYNSLIAGATRNSLL 93
E G S PD T+N+L+ G + +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 94 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
+++++D ML+ G PDV++YNS++ L +LG+ EA V MI D +P T T+N +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
++ LCK + A + R L G +P++ T+N LI+GLC R A + +E+ G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
P+ TY ++ K L +L M+ G Y T+I F K + +EA +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
++M GV + V+YNTLI+ CK ++E A L+D+M +G + DKYT+ L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
+ G+IK A ++ M G + ++ Y ++ L K G+++ A + S+++K
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLK 416
Y+ ++ L + ++ A L L+
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 209/474 (44%), Gaps = 75/474 (15%)
Query: 35 RLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLS 94
G+ PD YN +++ S +M GI PDV T+N LI R L
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 95 CSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI--------------- 139
++ +L++M G+ PD ++ ++M + G D A R+ + M+
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 140 ---CGD------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF 178
C + P TFN ++NGLCK + +A+ + + + G+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 179 VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK------------- 225
P++ TYN +I GLCK G ++ A +L ++ +PN +TY T++
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 226 --------------CCFRN--------RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
C F + R +++ +E+ M+ KG D F Y +I +
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
G+L EA + ++QM G +++YNTLI+ +CK K A + DEME G +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
T+ LIDGLCK+ ++ A ++ M G + YN ++ + G I A ++ ++M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 384 EV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
D TY +++ LCKA R+ ASKLL S G+ + A V+ GL
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 209/419 (49%), Gaps = 16/419 (3%)
Query: 44 TYNMLIDAYCQFVSFDAGYTILNRM-REAGISPDVVTYNSLIAGATRNSLLSC-SLDLLD 101
T+ +LI++Y QF D ++++ M E G+ PD YN ++ N L+ SL L++
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML-----NLLVDGNSLKLVE 174
Query: 102 ----EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
+M GI PDV ++N L+ L + + A + +DM L P TF ++ G
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS-GHAPN 216
+ D ALR+ + + G V+ N+++ G CK GR+ A ++E+ + G P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
T+ T++ + K +EI+ M ++GY D + Y +VI+ K+G +KEA + ++
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
QM+T + V+YNTLI+ CKE ++E A L + +G D T LI GLC
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYS 392
N + A E M G + + YN ++D L GK+D A+N+ + ME+ + TY+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 451
+++ CKA + A ++ GV ++DGL S +A ++ ++ M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 189/432 (43%), Gaps = 49/432 (11%)
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
++ SP+ Y ++ R+ +L++M ++ L+ Q
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 129 DEANRVFQDMICG-DLTPCTATFNIMLNGLCKNRYTDNALRMFR----GLQKHGFVPELV 183
DE V MI L P T +N MLN L N+L++ + G P++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG----NSLKLVEISHAKMSVWGIKPDVS 190
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
T+N+LIK LC+A +LR A +L+++ G P+ T+TT+M+ L I M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT-DGVQLDIVSYNTLINLYCKEGK 302
G ++ ++ F K GR+++A +++++M DG D ++NTL+N CK G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
++ A ++D M ++G++ D YT+ +I GLCK G +K A L+ M N YN
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 363 IVDRLGKDGKIDHA-----------------------------------INVFESMEVK- 386
++ L K+ +++ A + +FE M K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
D FTY+ ++ +LC +L A +L SG ++DG + REA+
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 444 KIQSKIRMAKIS 455
+I ++ + +S
Sbjct: 491 EIFDEMEVHGVS 502
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 19/306 (6%)
Query: 153 MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
+L+ L ALR+F +K F PE Y ++ L ++G + IL+++ S
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-------YCTVIAAFVK 264
T+ +++ +++L EILS + + D FG Y ++ V
Sbjct: 113 RCEMGTSTFLILIESY---AQFELQDEILSVVD---WMIDEFGLKPDTHFYNRMLNLLVD 166
Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
LK +M G++ D+ ++N LI C+ +L A L+L++M G D+ T
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
T ++ G + G++ GA E M + G + + N IV K+G+++ A+N + M
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 385 VKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 439
+D F T++++V+ LCKA + A +++ L+ G +V+ GL G
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 440 REAKKI 445
+EA ++
Sbjct: 347 KEAVEV 352
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 8/408 (1%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
LNI + FC+ + A +++ ++LG PD T+N LI +++RM
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E G PDVVTYNS++ G R+ S +LDLL +M E + DV++Y++++ L + G D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNIL 188
A +F++M + T+N ++ GLCK ++ D AL + + + VP ++T+N+L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVL 304
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKC-CFRNRKYKLGLEILSAMKRKG 247
+ K G+L+ A + KE+ G +PN ITY T+M C +NR + +L M R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN-NMLDLMVRNK 363
Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
+ D + ++I + + R+ + + G+ + V+Y+ L+ +C+ GK++ A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
L EM G D T+ IL+DGLC G ++ A E + K D + Y I++ +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
K GK++ A N+F S+ K + TY+ M+ LCK L A+ LL
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 212/418 (50%), Gaps = 4/418 (0%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G+ ++ T N++I+ +C+ Y++L ++ + G PD T+N+LI G +S +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
+ L+D M+E G PDV +YNS+++ + + G A + + M ++ T++ +++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
LC++ D A+ +F+ ++ G +VTYN L++GLCKAG+ +LK++ PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
IT+ ++ + K + E+ M +G + + Y T++ + RL EA + ++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
MV + DIV++ +LI YC +++ + + K+G + T++IL+ G C++G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYS 392
IK A + M G ++ Y ++D L +GK++ A+ +FE ++ Y+
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
+++ +CK ++ A L S GV+ ++ GL G EA + K+
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 208/416 (50%), Gaps = 4/416 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
++ +A ++ + G PDVVTYN +++ C+ +L +M E + DV TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
++I R+ + ++ L EM GI V +YNSL+ L + GK ++ + +DM+
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
++ P TFN++L+ K A +++ + G P ++TYN L+ G C RL A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+L + + +P+ +T+T+++K ++ G+++ + ++G + Y ++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
F + G++K A + ++MV+ GV D+++Y L++ C GKLE A + ++++K +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+T +I+G+CK G ++ A + G N+ Y ++ L K G + A +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
ME + TY++++ + L +++KL+ G S+ K V+D L
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 185/361 (51%), Gaps = 1/361 (0%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ C+ ++ A ++ + G+ VVTYN L+ C+ ++ G +L M I P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
+V+T+N L+ + L + +L EM+ GI P++ +YN+LM + EAN +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
M+ +P TF ++ G C + D+ +++FR + K G V VTY+IL++G C++
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
G+++ A + +E+ G P+ +TY ++ N K + LEI +++ Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 256 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 315
T+I K G++++A + + GV+ ++++Y +I+ CK+G L A +LL +ME+
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
G + T+ LI + G++ + +E M GF ++ + ++D L G++D
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDK 595
Query: 376 A 376
+
Sbjct: 596 S 596
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 176/339 (51%), Gaps = 7/339 (2%)
Query: 1 MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
+F ++ T+ + V T+ CKA + ++ D + ++P+V+T+N+L+D +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 54 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
+ + M GISP+++TYN+L+ G + LS + ++LD M+ PD+
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
++ SL+ + + D+ +VF+++ L T++I++ G C++ A +F+ +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
HG +P+++TY IL+ GLC G+L A I ++L S + YTTI++ + K
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
+ + ++ KG + Y +I+ K G L EA + +M DG + +YNTL
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 294 INLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
I + ++G L A+ L++EM+ GF D + ++ID L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
K D+A +FQ+MI P F+ + + + + + L + L+ +G + T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
I+I C+ + A +L ++ G+ P+ T+ T++K F K + ++ M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
G D Y +++ + G A D + +M V+ D+ +Y+T+I+ C++G ++AA
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
L EME +G + T+ L+ GLCKAG L L+ M N+ +N ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
K+GK+ A +++ M + + TY++++ C RL A+ +L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 35/260 (13%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
+C NRL +A ++ +R PD+VT+ LI YC D G + + + G+ +
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VTY+ L+ G ++ + + +L EM+ G+ PDV +Y L+ L GK ++A +F+
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Query: 137 DM-----------------------------------ICGDLTPCTATFNIMLNGLCKNR 161
D+ C + P T+ +M++GLCK
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
A + R +++ G P TYN LI+ + G L + +++E+ G + +A +
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Query: 222 TIMKCCFRNRKYKLGLEILS 241
++ K L++LS
Sbjct: 583 MVIDMLLSGELDKSFLDMLS 602
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 212/397 (53%), Gaps = 4/397 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + FC+ +RL A A++ ++LG PD+VT N L++ +C ++++M E
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD VT+ +LI G ++ S ++ L+D M++ G PD+ +Y ++++ L + G D
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M + ++ +++ LCK R+ D+AL +F ++ G P ++TY+ LI
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T++ ++ + K ++ M ++
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
+ F Y ++I F + RL EA +E M+ ++V+YNTLIN +CK +++ L
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+T LI G +A + A++ + M +G N+ YN ++D L K+
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 371 GKIDHAINVFESME----VKDSFTYSSMVHNLCKAKR 403
GK+ A+ VFE ++ D +TY+ M+ +CKA +
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 170/319 (53%)
Query: 21 NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
N+ +A A+I ++ G PD+VTY +++ C+ D +LN+M A I +VV Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 81 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
+++I + +L+L EM G+ P+V +Y+SL+ CL G+ +A+R+ DMI
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
+ P TF+ +++ K A +++ + K P + TY+ LI G C RL
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
A+ +L+ + PN +TY T++ + ++ G+E+ M ++G + Y T+I
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
F + A +QMV+ GV +I++YN L++ CK GKL A ++ + +++ E
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 321 DKYTHTILIDGLCKAGNIK 339
D YT+ I+I+G+CKAG K
Sbjct: 497 DIYTYNIMIEGMCKAGKWK 515
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 200/403 (49%), Gaps = 4/403 (0%)
Query: 39 LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
P ++ ++ L+ A + FD + +M GIS ++ TYN LI R S LS +L
Sbjct: 75 FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
LL +M+++G PD+ + NSL++ + +A + M+ P T TF +++GL
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
+ A+ + + + G P+LVTY ++ GLCK G A +L ++ + N +
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
Y+T++ + R L + + M+ KG + Y ++I+ GR +A+ + M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
+ + ++V+++ LI+ + K+GKL A L +EM K+ + + +T++ LI+G C +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
A+ LE M + N+ YN +++ K ++D + +F M V ++ TY+++
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
+H +A+ +A + + GV ++DGL +G
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ CK + A + + GV P+V+TY+ LI C + + +L+ M E I+P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
++VT+++LI + L + L +EM++ I P++++Y+SL++ L + EA ++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
+ MI D P T+N ++NG CK + D + +FR + + G V VTY LI G +A
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 255
A+ + K++ G PN +TY ++ +N K + + ++R D + Y
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 256 CTVIAAFVKIGRLKEATDY 274
+I K G+ K Y
Sbjct: 502 NIMIEGMCKAGKWKMGGIY 520
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 41/323 (12%)
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
D+A +F M P F+ +L+ + K D + ++ G L TYNIL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 189 I-----------------------------------KGLCKAGRLRTARWILKELGDSGH 213
I G C R+ A ++ ++ + G+
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
P+ +T+TT++ F + K + ++ M ++G D Y V+ K G A +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
+ +M ++ ++V Y+T+I+ CK + A L EME +G + T++ LI LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----- 388
G A L M + + NL ++ ++D K GK+ A ++E M +K S
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRSIDPNI 358
Query: 389 FTYSSMVHNLCKAKRLPSASKLL 411
FTYSS+++ C RL A ++L
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQML 381
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
D+A+ +F + + P ++ ++ L+ + K + +++ G + N TY +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
+ C R + L L +L M + GY D +++ F R+ +A ++QMV G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
+ D V++ TLI+ K A L+D M ++G + D T+ +++GLCK G+ A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
L M ++N+ Y+ ++D L K D A+N+F ME K + TYSS++ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
R AS+LL ++ + A++D G +A+K+ ++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
+ S P+ I ++ ++ + K+ L + M+ G + + + Y +I F + R
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
L A + +M+ G + DIV+ N+L+N +C ++ A L+D+M + G++ D T T
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
LI GL A ++ M + G +L Y +V+ L K G D A+N+ ME
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 443
+ YS+++ +LCK + A L GVR +++ L + G +A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 444 KIQSKIRMAKIS 455
++ S + KI+
Sbjct: 309 RLLSDMIERKIN 320
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 220/436 (50%), Gaps = 4/436 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + FC+ ++L A A++ ++LG PD+VT + L++ YC ++++M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
P+ VT+N+LI G ++ S ++ L+D M+ G PD+++Y ++++ L + G D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + + M G + + +++ LC + ++AL +F + G P +VTYN LI+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L ++ + PN +T++ ++ + K ++ M ++
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D F Y ++I F RL EA E M++ ++V+YNTLI +CK ++E L
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+ LI GL +AG+ A+ + M G ++ Y+ ++D L K
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
GK++ A+ VFE ++ D +TY+ M+ +CKA ++ L S GV+
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 427 KAVVDGLRHSGCRREA 442
++ G G + EA
Sbjct: 539 TTMISGFCRKGLKEEA 554
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 196/382 (51%)
Query: 21 NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
N+ +A A+I + G PD+ TY +++ C+ D ++L +M + I DVV Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 81 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
++I ++ +L+L EM GI P+V +YNSL+ CL G+ +A+R+ DMI
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
+ P TF+ +++ K A +++ + K P++ TY+ LI G C RL
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
A+ + + + PN +TY T++K + ++ + G+E+ M ++G + Y T+I
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
+ G A ++MV+DGV DI++Y+ L++ CK GKLE A ++ + ++K E
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
D YT+ I+I+G+CKAG ++ ++ G N+ Y ++ + G + A +F
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 381 ESMEVKDSFTYSSMVHNLCKAK 402
M+ + S + L +A+
Sbjct: 559 REMKEDGTLPNSGTYNTLIRAR 580
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 191/401 (47%), Gaps = 5/401 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
CK ++ A +++ + + DVV Y +IDA C + + + + M GI P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VVTYNSLI S + LL +M+E I P+V ++++L+ + GK EA +++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
+MI + P T++ ++NG C + D A MF + P +VTYN LIKG CKA
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
R+ + +E+ G N +TY T+++ F+ + +I M G D Y
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
++ K G+L++A E + ++ DI +YN +I CK GK+E + L + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
G + + +T +I G C+ G + A M + G N YN ++ +DG +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 377 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
+ + M V D+ T SMV N+ RL + +LS
Sbjct: 590 AELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSYLEMLS 629
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 200/416 (48%), Gaps = 4/416 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+L+ A + + ++ LP +V +N L+ A + FD ++ RM+ IS D+ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
LI R S L +L +L +M+++G PD+ + +SL++ + EA + M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
+ P T TFN +++GL + A+ + + G P+L TY ++ GLCK G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+LK++ + + YTTI+ + L + + M KG + Y ++I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
GR +A+ + M+ + ++V+++ LI+ + KEGKL A L DEM K+ + D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+T++ LI+G C + A+ E M N+ YN ++ K +++ + +F
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
M V ++ TY++++ L +A A K+ + GV ++DGL
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 185/411 (45%), Gaps = 9/411 (2%)
Query: 43 VTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDE 102
++ N+L+D + D + M ++ P +V +N L++ + + + L +
Sbjct: 51 LSRNVLLD-----LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY 162
M + I D++SYN L++C + + A V M+ P T + +LNG C +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
A+ + + + P VT+N LI GL + A ++ + G P+ TY T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
++ + L L +L M++ D Y T+I A + +A + +M G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
++ ++V+YN+LI C G+ A LL +M ++ + T + LID K G + A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNL 398
+ M K D ++ Y+ +++ ++D A ++FE M KD F TY++++
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
CKAKR+ +L + G+ ++ GL +G A+KI K+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 115/231 (49%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCKA R+E+ + + + G++ + VTYN LI Q D I +M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD++TY+ L+ G + L +L + + + + + PD+++YN ++ + + GK ++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+F + + P + M++G C+ + A +FR +++ G +P TYN LI+
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ G + ++KE+ G +A T + ++ R K LE+LS
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
+T N + +A + A+ I + GV PD++TY++L+D C++ + +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
++++ + PD+ TYN +I G + + DL + G+ P+V Y +++ +
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
G +EA+ +F++M P + T+N ++ ++ + + + ++ GFV + T
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Query: 186 NILIKGLCKAGRLRTA 201
+++I L GRL +
Sbjct: 609 SMVINML-HDGRLEKS 623
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 194 bits (494), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 217/481 (45%), Gaps = 41/481 (8%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
LNI V CK ++EK + GV PD+VTYN LI AY + + ++N M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
G SP V TYN++I G ++ + ++ EML G+ PD +Y SL+ + G
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
E +VF DM D+ P F+ M++ ++ D AL F +++ G +P+ V Y ILI
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY---------------- 233
+G C+ G + A + E+ G A + +TY TI+ + +
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 234 --------------KLG-----LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
KLG +E+ MK K D Y T++ F K+G + A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
MV+ + +SY+ L+N C +G L A+ + DEM + + +I G C+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME------VKDS 388
+GN LE M GF + +YN ++ ++ + A + + ME V D
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 389 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
FTY+S++H C+ ++ A +L ++ GV +S +++G EA +I +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 449 I 449
+
Sbjct: 718 M 718
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 202/445 (45%), Gaps = 4/445 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ ++ + T+ +A +L +A G + N LI + + + + + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
+G+ +V T N ++ ++ + L ++ E G+ PD+ +YN+L+ G
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
+EA + M +P T+N ++NGLCK+ + A +F + + G P+ TY L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
+ CK G + + ++ P+ + ++++M R+ L +++K G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D Y +I + + G + A + +M+ G +D+V+YNT+++ CK L A
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
L +EM ++ D YT TILIDG CK GN++ A + M + ++ YN ++D G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 369 KDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
K G ID A ++ M K+ +YS +V+ LC L A ++ + ++
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 425 AQKAVVDGLRHSGCRREAKKIQSKI 449
+++ G SG + + K+
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKM 611
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 188/378 (49%), Gaps = 41/378 (10%)
Query: 18 CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
CK + + E + D V+PD+V ++ ++ + + + D N ++EAG+ PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 78 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
V Y LI G R ++S +++L +EML+ G DV +YN+++H L + EA+++F +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
M L P + T I+++G CK NA+ +F+ +++ ++VTYN L+ G K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 198 LRTARWILKELGDSGHAPNAITYT-----------------------------TIMKC-- 226
+ TA+ I ++ P I+Y+ T+M C
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 227 -----CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
C R+ G L M +G+ D Y T+I FV+ + +A +++M +
Sbjct: 591 MIKGYC-RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 282 --GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
G+ D+ +YN++++ +C++ +++ A ++L +M ++G D+ T+T +I+G N+
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 340 GA-RLHLEYMNKIGFDSN 356
A R+H E + + GF +
Sbjct: 710 EAFRIHDEMLQR-GFSPD 726
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 37/342 (10%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
F ++ L+KA G++PD V Y +LI YC+ + N M + G + D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD------------------------- 111
VVTYN+++ G + +L + L +EM E + PD
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 112 ----------VWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
V +YN+L+ ++G D A ++ DM+ ++ P +++I++N LC
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
+ A R++ + P ++ N +IKG C++G L+++ G P+ I+Y
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 222 TIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
T++ R ++ M+ + G D F Y +++ F + ++KEA + +M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
GV D +Y +IN + + L A+ + DEM ++GF D
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 148 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 207
+ F++++ + R A F L+ GF + N LI L + G + A + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 208 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
+ SG N T ++ ++ K + LS ++ KG D Y T+I+A+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
++EA + M M G + +YNT+IN CK GK E A + EM + G D T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 384
L+ CK G++ M +L ++ ++ + G +D A+ F S++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 385 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 441
+ D+ Y+ ++ C+ + A L L+ G + ++ GL C+R+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL----CKRK 459
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 1 MFGKLSTRLLNICVCT-------FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
+F K+ + + + V T F K ++ A+ I D + +LP ++Y++L++A C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 54 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
+ + + M I P V+ NS+I G R+ S L++M+ G PD
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 114 SYNSLMHCLFQLGKPDEANRVFQDM--ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFR 171
SYN+L++ + +A + + M G L P T+N +L+G C+ A + R
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
+ + G P+ TY +I G L A I E+ G +P+
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
N + +++ + RK + E + ++ KG+T +I + V+IG ++ A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
+++ GV +++ + N ++N CK+GK+E L +++++G D T+ LI
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 391
G ++ A + M GF + YN +++ L K GK + A VF M DS TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 392 SSMVHNLCKAKRLPSASKLL 411
S++ CK + K+
Sbjct: 344 RSLLMEACKKGDVVETEKVF 363
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 220/450 (48%), Gaps = 9/450 (2%)
Query: 11 NICVCTFCKANRLEKAEAII---IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNR 67
NI + C NR ++A ++ D G PDVV+Y +I+ + + D Y+ +
Sbjct: 162 NILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
Query: 68 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
M + GI PDVVTYNS+IA + + ++++L+ M++ G+ PD +YNS++H G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
P EA + M + P T++++++ LCKN A ++F + K G PE+ TY
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
L++G G L +L + +G P+ ++ ++ + K + + S M+++G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
+ Y VI K GR+++A Y EQM+ +G+ + YN+LI+ C K E A
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
L+ EM +G + +ID CK G + + E M +IG N+ YN +++
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 368 GKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
GK+D A+ + M ++ TYS++++ CK R+ A L SGV
Sbjct: 522 CLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDI 581
Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKIRMAK 453
++ GL + RR A + +R+ +
Sbjct: 582 ITYNIILQGLFQT--RRTAAAKELYVRITE 609
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 214/439 (48%), Gaps = 4/439 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + CKA ++KA ++ ++ GV+PD +TYN ++ YC L +MR
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PDVVTY+ L+ +N + + D M + G+ P++ +Y +L+ G E
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
+ + M+ + P F+I++ K D A+ +F +++ G P VTY +I
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LCK+GR+ A +++ D G +P I Y +++ K++ E++ M +G
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
+ + ++I + K GR+ E+ E MV GV+ ++++YNTLIN YC GK++ A LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
M G + + T++ LI+G CK ++ A + + M G ++ YN I+ L +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 371 GKIDHA----INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
+ A + + ES + TY+ ++H LCK K A ++ + +++
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 427 KAVVDGLRHSGCRREAKKI 445
++D L G EAK +
Sbjct: 655 NIMIDALLKVGRNDEAKDL 673
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 219/438 (50%), Gaps = 8/438 (1%)
Query: 18 CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC-QFVSFDAGYTILNRMREAGISPD 76
C+A RL+ A + + I+ G D + + L+ C + DA +L RM E G P+
Sbjct: 98 CRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPN 157
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLE---MGIPPDVWSYNSLMHCLFQLGKPDEANR 133
V +YN L+ G + +L+LL M + G PPDV SY ++++ F+ G D+A
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 134 VFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLC 193
+ +M+ + P T+N ++ LCK + D A+ + + K+G +P+ +TYN ++ G C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 194 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
+G+ + A LK++ G P+ +TY+ +M +N + +I +M ++G +
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 254 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
Y T++ + G L E ++ MV +G+ D ++ LI Y K+GK++ A L+ +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
+QG + T+ +I LCK+G ++ A L+ E M G YN ++ L K
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 374 DHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
+ A + M + ++ ++S++ + CK R+ + KL ++ GV+ +
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 430 VDGLRHSGCRREAKKIQS 447
++G +G EA K+ S
Sbjct: 518 INGYCLAGKMDEAMKLLS 535
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 196/419 (46%), Gaps = 13/419 (3%)
Query: 38 VLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
V PD+ TY +LI C+ D G+ L + + G D + + L+ G + S ++
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 98 DL-LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI---CGDLTPCTATFNIM 153
D+ L M E+G P+V+SYN L+ L + EA + M G P ++ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
+NG K +D A + + G +P++VTYN +I LCKA + A +L + +G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
P+ +TY +I+ + + K + L M+ G D Y ++ K GR EA
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
+ M G++ +I +Y TL+ Y +G L + LLD M + G D Y +ILI
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSF 389
K G + A L M + G + N Y ++ L K G+++ A+ FE M +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK 448
Y+S++H LC + A +L+L L G+ + +++D S C +E + I+S+
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID----SHC-KEGRVIESE 496
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 154/315 (48%), Gaps = 1/315 (0%)
Query: 5 LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
L+T N + + CK R+ ++E + +R+GV P+V+TYN LI+ YC D +
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 65 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
L+ M G+ P+ VTY++LI G + S + +L L EM G+ PD+ +YN ++ LFQ
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
+ A ++ + +T+NI+L+GLCKN+ TD+AL+MF+ L E T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653
Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
+NI+I L K GR A+ + +G PN TY + + + ++ +M+
Sbjct: 654 FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
G T D ++ ++ G + A Y+ + L+ + + I+L GK +
Sbjct: 714 DNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQ 772
Query: 305 AAYLLLDEMEKQGFE 319
Y L E K E
Sbjct: 773 EYYRFLPEKYKSFIE 787
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 190/410 (46%), Gaps = 43/410 (10%)
Query: 34 IRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLL 93
+R G+ PD +++LI AY + D + ++MR+ G++P+ VTY ++I ++ +
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 94 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
++ ++M++ G+ P YNSL+H L K + A + +M+ + T FN +
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
++ CK + ++F + + G P ++TYN LI G C AG++ A +L + G
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATD 273
PN +TY+T++ GYC KI R+++A
Sbjct: 543 KPNTVTYSTLIN----------------------------GYC-------KISRMEDALV 567
Query: 274 YMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
++M + GV DI++YN ++ + + AA L + + G + + T+ I++ GLC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME----VKD 387
K + L + + N D LEA +N ++D L K G+ D A ++F + V +
Sbjct: 628 K-NKLTDDALQM-FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
+TY M N+ L +L LS +G + +V L G
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 200/431 (46%), Gaps = 20/431 (4%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ +I +C + K ++++A + + G+ P+ VTY +I C+ + +M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
+ G+SP + YNSLI G + + +L+ EML+ GI + +NS++ + G+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
E+ ++F+ M+ + P T+N ++NG C D A+++ G+ G P VTY+ L
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I G CK R+ A + KE+ SG +P+ ITY I++ F+ R+ E+ + G
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
+ Y ++ K +A + + ++L+ ++N +I+ K G+ + A
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
L G + +T+ ++ A NI G L LE ++++ ++E C VD
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM------AENIIGQGL-LEELDQLFL--SMEDNGCTVD--- 720
Query: 369 KDGKIDHAI-NVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-----VRIL 422
G ++ + + + E+ + TY SM+ + +AS L + L G R L
Sbjct: 721 -SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTAS-LFIDLLSGGKYQEYYRFL 778
Query: 423 KSAQKAVVDGL 433
K+ ++ L
Sbjct: 779 PEKYKSFIESL 789
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 12/332 (3%)
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG--DLTPCTATFNIMLNG 156
+ DE+L G ++ N + + + +R + G ++TP T+ I++
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA-RWILKELGDSGHAP 215
C+ D + K GF + + + L+KGLC R A +L+ + + G P
Sbjct: 97 CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156
Query: 216 NAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
N +Y ++K C NR + LE+L M + G D Y TVI F K G +A
Sbjct: 157 NVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
+M+ G+ D+V+YN++I CK ++ A +L+ M K G D T+ ++ G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
C +G K A L+ M G + ++ Y+ ++D L K+G+ A +F+SM + +
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
TY +++ L LL +++G+
Sbjct: 336 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 35/240 (14%)
Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
P+ TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 275 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 330
+ + +T+ G ++ SYN L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 331 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFT 390
G K G+ D Y+ ++DR + D T
Sbjct: 205 GFFKEGD---------------SDKAYSTYHEMLDR----------------GILPDVVT 233
Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
Y+S++ LCKA+ + A ++L + +K+GV +++ G SG +EA K+R
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 223/446 (50%), Gaps = 6/446 (1%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
+ I + +C+ +L A +++ +LG PD +T++ L++ +C +++RM
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E PD+VT ++LI G +S +L L+D M+E G PD +Y +++ L + G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
A +F+ M ++ ++I+++ LCK+ D+AL +F ++ G ++VTY+ LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
GLC G+ +L+E+ P+ +T++ ++ + K E+ + M +G
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y ++I F K L EA + MV+ G + DIV+Y+ LIN YCK +++ L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
E+ +G + T+ L+ G C++G + A+ + M G ++ Y ++D L
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 370 DGKIDHAINVFESMEVKDSFT-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
+G+++ A+ +FE M+ K T Y+ ++H +C A ++ A L S GV+
Sbjct: 468 NGELNKALEIFEKMQ-KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIR 450
++ GL G EA + K++
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 189/375 (50%), Gaps = 5/375 (1%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K S +I + + CK + A ++ + G+ DVVTY+ LI C +D G
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L M I PDVVT+++LI + L + +L +EM+ GI PD +YNSL+
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ EAN++F M+ P T++I++N CK + D+ +R+FR + G +P +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
TYN L+ G C++G+L A+ + +E+ G P+ +TY ++ N + LEI M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 244 KRKGYTFDGFG-YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
++ T G G Y +I ++ +A + GV+ D+V+YN +I CK+G
Sbjct: 482 QKSRMTL-GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDG-LCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
L A +L +M++ G D +T+ ILI L +G I L +E M GF ++
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL-IEEMKVCGFSADSSTIK 599
Query: 362 CIVDRLGKDGKIDHA 376
++D L D ++D +
Sbjct: 600 MVIDMLS-DRRLDKS 613
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 188/377 (49%), Gaps = 7/377 (1%)
Query: 42 VVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLD 101
VV Y+++ID+ C+ SFD ++ N M GI DVVTY+SLI G + +L
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
EM+ I PDV ++++L+ + GK EA ++ +MI + P T T+N +++G CK
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
A +MF + G P++VTY+ILI CKA R+ + +E+ G PN ITY
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
T++ ++ K E+ M +G Y ++ G L +A + E+M
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 341
+ L I YN +I+ C K++ A+ L + +G + D T+ ++I GLCK G++ A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 342 RLHLEYMNKIGFDSNLEAYNCIV-DRLGKDGKIDHAINVFESMEV----KDSFTYSSMVH 396
+ M + G + YN ++ LG G I ++ + E M+V DS T MV
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSADSSTI-KMVI 602
Query: 397 NLCKAKRLPSASKLLLS 413
++ +RL + +LS
Sbjct: 603 DMLSDRRLDKSFLDMLS 619
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 200/423 (47%), Gaps = 39/423 (9%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G+ D+ T ++I+ YC+ +++L R + G PD +T+++L+ G +S +
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
+ L+D M+EM PD+ + ++L++ L G+ EA + M+ P T+ +LN
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
LCK+ + AL +FR +++ +V Y+I+I LCK G A
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA--------------- 264
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
L + + M+ KG D Y ++I G+ + +
Sbjct: 265 --------------------LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
+M+ + D+V+++ LI+++ KEGKL A L +EM +G D T+ LIDG CK
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
+ A + M G + ++ Y+ +++ K ++D + +F + K ++ TY+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
++V C++ +L +A +L + GV ++DGL +G +A +I K++ +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 453 KIS 455
+++
Sbjct: 485 RMT 487
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 214
NG+ + D A+ +F + + +P + +N L + + + K + +G
Sbjct: 44 NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
+ T T ++ C R +K +L + GY D + T++ F GR+ EA
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
+++MV + D+V+ +TLIN C +G++ A +L+D M + GF+ D+ T+ +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
+GN A M + +++ Y+ ++D L KDG D A+++F ME+K D T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
YSS++ LC + +K+L + + A++D G EAK++ +++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 35/260 (13%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FCK N L +A + + G PD+VTY++LI++YC+ D G + + G+ P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
+TYN+L+ G ++ L+ + +L EM+ G+PP V +Y L+ L G+ ++A +F+
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 137 DMICGDLT-----------------------------------PCTATFNIMLNGLCKNR 161
M +T P T+N+M+ GLCK
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
A +FR +++ G P+ TYNILI+ L ++ +++E+ G + ++ T
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599
Query: 222 TIMKCCFRNRKYKLGLEILS 241
++ R K L++LS
Sbjct: 600 MVIDMLSDRRLDKSFLDMLS 619
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 220/445 (49%), Gaps = 4/445 (0%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
L+I + FC+ +L A + + I+LG P+ +T++ LI+ C +++RM
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E G PD++T N+L+ G + + ++ L+D+M+E G P+ +Y +++ + + G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
A + + M ++ ++I+++GLCK+ DNA +F ++ G ++TYNILI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G C AGR +L+++ PN +T++ ++ + K + E+ M +G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y ++I F K L +A ++ MV+ G +I ++N LIN YCK +++ L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+M +G D T+ LI G C+ G + A+ + M N+ Y ++D L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
+G+ + A+ +FE +E D Y+ ++H +C A ++ A L S GV+
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 426 QKAVVDGLRHSGCRREAKKIQSKIR 450
++ GL G EA+ + K+
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKME 570
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 1/370 (0%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
KL +I + CK L+ A + + G+ +++TYN+LI +C +D G
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L M + I+P+VVT++ LI + L + +L EM+ GI PD +Y SL+
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ D+AN++ M+ P TFNI++NG CK D+ L +FR + G V + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
TYN LI+G C+ G+L A+ + +E+ PN +TY ++ N + + LEI +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
++ D Y +I ++ +A D + GV+ + +YN +I CK+G L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
A LL +ME+ G D +T+ ILI G+ + +E + + GF + +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 364 VDRLGKDGKI 373
+D L DG++
Sbjct: 620 IDMLS-DGRL 628
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 205/428 (47%), Gaps = 4/428 (0%)
Query: 32 DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNS 91
D I LP V+ ++ L A + +D + +M GI+ ++ T + +I R
Sbjct: 78 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137
Query: 92 LLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFN 151
L + + +++++G P+ ++++L++ L G+ EA + M+ P T N
Sbjct: 138 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 197
Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
++NGLC + A+ + + ++G P VTY ++ +CK+G+ A +L+++ +
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
+A+ Y+ I+ ++ + + M+ KG T + Y +I F GR +
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
+ M+ + ++V+++ LI+ + KEGKL A L EM +G D T+T LIDG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
CK ++ A ++ M G D N+ +N +++ K +ID + +F M V D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
+ TY++++ C+ +L A +L + V K ++DGL +G +A +I
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 448 KIRMAKIS 455
KI +K+
Sbjct: 498 KIEKSKME 505
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 166/344 (48%)
Query: 41 DVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLL 100
D V Y+++ID C+ S D + + N M GI+ +++TYN LI G LL
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
+M++ I P+V +++ L+ + GK EA + ++MI + P T T+ +++G CK
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
+ D A +M + G P + T+NILI G CKA R+ + +++ G + +TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
T+++ K + E+ M + + Y ++ G ++A + E++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
++LDI YN +I+ C K++ A+ L + +G + T+ I+I GLCK G +
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 384
A L M + G + YN ++ DG ++ + E ++
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
K D+A +F+DMI P F+ + + + K + D L + + ++ G L T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
I+I C+ +L A + ++ G+ PN IT++T++ + LE++ M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
G+ D T++ G+ EA +++MV G Q + V+Y ++N+ CK G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
LL +ME++ + D ++I+IDGLCK G++ A M G +N+ YN ++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
G+ D + M + + T+S ++ + K +L A +L + G+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 423 KSAQKAVVDGL 433
+++DG
Sbjct: 368 TITYTSLIDGF 378
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 35/260 (13%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FCK N L+KA ++ + G P++ T+N+LI+ YC+ D G + +M G+ D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VTYN+LI G L+ + +L EM+ +PP++ +Y L+ L G+ ++A +F+
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 137 -------------------------------DMICG----DLTPCTATFNIMLNGLCKNR 161
D+ C + P T+NIM+ GLCK
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
A +FR +++ G P+ TYNILI+ G + +++EL G + +A T
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 222 TIMKCCFRNRKYKLGLEILS 241
++ R K L++LS
Sbjct: 618 MVIDMLSDGRLKKSFLDMLS 637
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 214/465 (46%), Gaps = 47/465 (10%)
Query: 1 MFGKLSTRLLNICVCTF-------CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC 53
+FGK+ +++C+ TF CK +++ E ++ I+ GVLP++ TYN+ I C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 54 QFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVW 113
Q D ++ + E G PDV+TYN+LI G +NS + L +M+ G+ PD +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMF--- 170
+YN+L+ + G A R+ D + P T+ +++GLC T+ AL +F
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 171 ----------------RGLQKH----------------GFVPELVTYNILIKGLCKAGRL 198
+GL G +PE+ T+NIL+ GLCK G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
A ++K + G+ P+ T+ ++ K + LEIL M G D + Y ++
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
+ K + ++ + + MV G ++ ++N L+ C+ KL+ A LL+EM+ +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAI 377
D T LIDG CK G++ GA M + S+ YN I+ + + A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 378 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 418
+F+ M + D +TY MV CK + K LL +++G
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 206/434 (47%), Gaps = 6/434 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + +CK ++ AE I+ D + G +PD TY LID C + + N
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
GI P+V+ YN+LI G + ++ + L +EM E G+ P+V ++N L++ L ++G +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A+ + + MI P TFNI+++G +NAL + + +G P++ TYN L+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
GLCK + K + + G APN T+ +++ R RK L +L MK K
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D + T+I F K G L A +M V +YN +I+ + ++ + A L
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIK-GARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
EM + D YT+ +++DG CK GN+ G + LE M GF +L +++ L
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN-GFIPSLTTLGRVINCLC 683
Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKA-KRLPSASKLLLSCLKSGVRILKSAQK 427
+ ++ A + M K V+ +C K+ +A KL+L L I A +
Sbjct: 684 VEDRVYEAAGIIHRMVQKG--LVPEAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYE 741
Query: 428 AVVDGLRHSGCRRE 441
+ DGLR R++
Sbjct: 742 LLFDGLRDKRLRKK 755
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 188/386 (48%), Gaps = 4/386 (1%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G+ PDV ++ + + ++C+ A +LN M G +VV Y +++ G + +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
+L +ML G+ + ++N L+ L + G E ++ +I + P T+N+ + G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
LC+ D A+RM L + G P+++TYN LI GLCK + + A L ++ + G P+
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
+ TY T++ + +L I+ G+ D F Y ++I G A
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
+ + G++ +++ YNTLI +G + A L +EM ++G + T IL++GLCK G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTYS 392
+ A ++ M G+ ++ +N ++ K+++A+ + + M D +TY+
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSG 418
S+++ LCK + + + ++ G
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 4/398 (1%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
P V +YN ++ FD + + RMR+ GI+PDV ++ + + S +L L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
L+ M G +V +Y +++ ++ E +F M+ ++ C +TFN +L LCK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
++ + K G +P L TYN+ I+GLC+ G L A ++ L + G P+ IT
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y ++ +N K++ L M +G D + Y T+IA + K G ++ A + V
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
+G D +Y +LI+ C EG+ A L +E +G + + + LI GL G I
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
A M++ G ++ +N +V+ L K G + A + + M K D FT++ ++
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
H ++ +A ++L L +GV ++++GL
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 192/435 (44%), Gaps = 39/435 (8%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGIS- 74
+FCK +R A ++ + G +VV Y ++ + + GY + +M +G+S
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 75 ----------------------------------PDVVTYNSLIAGATRNSLLSCSLDLL 100
P++ TYN I G + L ++ ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 101 DEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKN 160
++E G PDV +YN+L++ L + K EA M+ L P + T+N ++ G CK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 161 RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 220
A R+ +GFVP+ TY LI GLC G A + E G PN I Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 221 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
T++K ++ + M KG + + ++ K+G + +A ++ M++
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
G DI ++N LI+ Y + K+E A +LD M G + D YT+ L++GLCK +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 396
+ M + G NL +N +++ L + K+D A+ + E M+ K D+ T+ +++
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 397 NLCKAKRLPSASKLL 411
CK L A L
Sbjct: 575 GFCKNGDLDGAYTLF 589
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 14/396 (3%)
Query: 64 ILNRMR-EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE-MGIPPDVWSYNSLMHC 121
+ N MR E G + TY S+I ++L +M E +G Y M
Sbjct: 26 MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKN 85
Query: 122 LFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPE 181
+ GK EA VF+ M D P ++N +++ L + Y D A +++ ++ G P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 182 LVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 241
+ ++ I +K CK R A +L + G N + Y T++ + G E+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 242 AMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG 301
M G + + ++ K G +KE +++++ GV ++ +YN I C+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 302 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 361
+L+ A ++ + +QG + D T+ LI GLCK + A ++L M G + + YN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 362 CIVDRLGKDGKI--------DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLS 413
++ K G + D N F V D FTY S++ LC A L
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGF----VPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 414 CLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
L G++ ++ GL + G EA ++ +++
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
ST NI + F + + AE + + + + PD TY +++D +C+ + + GY L
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD 111
M E G P + T +I + + ++ M++ G+ P+
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 214/416 (51%), Gaps = 7/416 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N+ + FC++++ A + + ++LG PD+VT+ LI+ +C + +++N+M E
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
GI PDVV Y ++I +N ++ +L L D+M GI PDV Y SL++ L G+ +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A+ + + M + P TFN +++ K +A ++ + + P + TY LI
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
G C G + AR + + G P+ + YT+++ + +K ++I M +KG T
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
+ Y T+I F ++G+ A + MV+ GV +I +YN L++ C GK++ A ++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 311 DEMEKQ---GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
++M+K+ G + +T+ +L+ GLC G ++ A + E M K D + Y I+ +
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
K GK+ +A+N+F S+ K + TY++M+ L + A L + GV
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 226/464 (48%), Gaps = 27/464 (5%)
Query: 7 TRLLNICVCTFCKANRLEKAEAII--IDGIR-LGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
T+LLN+ +++K + +I D ++ +GV D+ T N+L++ +CQ +
Sbjct: 76 TKLLNVIA-------KMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
L +M + G PD+VT+ SLI G + + ++ ++++M+EMGI PDV Y +++ L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ G + A +F M + P + ++NGLC + +A + RG+ K P+++
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI-----MKCCFRNRKYKLGLE 238
T+N LI K G+ A + E+ APN TYT++ M+ C + +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR-----Q 303
Query: 239 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
+ M+ KG D Y ++I F K ++ +A +M G+ + ++Y TLI +
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 299 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD---S 355
+ GK A + M +G + T+ +L+ LC G +K A + E M K D
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 356 NLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHNLCKAKRLPSASKLL 411
N+ YN ++ L +GK++ A+ VFE M ++ TY+ ++ +CKA ++ +A L
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 412 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
S GV+ ++ GL G + EA + K++ +S
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 42/394 (10%)
Query: 56 VSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY 115
+ F+ + M E+ P ++ + L+ + ++L D + MG+ D+++
Sbjct: 51 LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 116 NSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG------------------- 156
N LM+C Q +P A+ M+ P TF ++NG
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 157 ----------------LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
LCKN + + AL +F ++ +G P++V Y L+ GLC +GR R
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
A +L+ + P+ IT+ ++ + K+ E+ + M R + F Y ++I
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
F G + EA M T G D+V+Y +LIN +CK K++ A + EM ++G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
+ T+T LI G + G A+ +M G N+ YN ++ L +GK+ A+ +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 381 ESMEVKDS-------FTYSSMVHNLCKAKRLPSA 407
E M+ ++ +TY+ ++H LC +L A
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 137/300 (45%), Gaps = 5/300 (1%)
Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
F + N L K + AL R L +V Y +++ + + A + +
Sbjct: 6 FQLHRNRLVKGN-SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMV 64
Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
+S P+ I +T ++ + +K+ + + + ++ G + D + ++ F + +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 270 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 329
A+ ++ +M+ G + DIV++ +LIN +C ++E A ++++M + G + D +T +I
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 330 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 386
D LCK G++ A + M G ++ Y +V+ L G+ A ++ M +
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 387 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
D T+++++ K + A +L ++ + ++++G GC EA+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 210/436 (48%), Gaps = 42/436 (9%)
Query: 22 RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
+L+K + +I G + LG+ D+ T+N++I+ +C +IL +M + G PD V
Sbjct: 97 KLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV 156
Query: 79 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
T SL+ G R + +S ++ L+D+M+E+G PD+ +YN++
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-------------------- 196
Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
++ LCK + ++A F+ +++ G P +VTY L+ GLC + R
Sbjct: 197 ---------------IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
A +L ++ PN ITY+ ++ +N K E+ M R D Y ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
I R+ EA + MV+ G D+VSYNTLIN +CK ++E L EM ++G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
+ T+ LI G +AG++ A+ M+ G ++ YN ++ L +G+++ A+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
+FE M+ + D TY++++ +CK ++ A L S G++ ++ GL
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 435 HSGCRREAKKIQSKIR 450
G E + + +K++
Sbjct: 482 TKGLLHEVEALYTKMK 497
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 170/320 (53%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC+ NR+ A +++ + +G PD+V YN +ID+ C+ + + + GI P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VVTY +L+ G +S S + LL +M++ I P+V +Y++L+ + GK EA +F+
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
+M+ + P T++ ++NGLC + D A +MF + G + ++V+YN LI G CKA
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
R+ + +E+ G N +TY T+++ F+ E S M G + D + Y
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
++ G L++A E M + LDIV+Y T+I CK GK+E A+ L + +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 317 GFECDKYTHTILIDGLCKAG 336
G + D T+T ++ GLC G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKG 484
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 190/375 (50%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
NI + FC ++ A +I+ ++LG PD VT L++ +C+ +++++M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E G PD+V YN++I + ++ + D E+ GI P+V +Y +L++ L +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+A R+ DMI +TP T++ +L+ KN A +F + + P++VTY+ LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
GLC R+ A + + G + ++Y T++ + ++ + G+++ M ++G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+ Y T+I F + G + +A ++ QM G+ DI +YN L+ C G+LE A ++
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
++M+K+ + D T+T +I G+CK G ++ A ++ G ++ Y ++ L
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 370 DGKIDHAINVFESME 384
G + ++ M+
Sbjct: 483 KGLLHEVEALYTKMK 497
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 160/333 (48%), Gaps = 4/333 (1%)
Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
K ++A +F DM+ P FN +L+ + K + D + + + ++ G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
I+I C ++ A IL ++ G+ P+ +T +++ R + + ++ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
GY D Y +I + K R+ +A D+ +++ G++ ++V+Y L+N C + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
LL +M K+ + T++ L+D K G + A+ E M ++ D ++ Y+ +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
L +ID A +F+ M K D +Y+++++ CKAKR+ KL + G+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 423 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
++ G +G +A++ S++ IS
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 208/407 (51%), Gaps = 4/407 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
+I + FC+ ++L A A++ ++LG PD+VT + L++ YC ++++M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD T+ +LI G ++ S ++ L+D+M++ G PD+ +Y ++++ L + G D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A + M + FN +++ LCK R+ + A+ +F ++ G P +VTYN LI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
LC GR A +L + + PN +T+ ++ F+ K ++ M ++
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D Y +I F RL EA + MV+ +I +YNTLIN +CK ++E L
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM ++G + T+T +I G +AG+ A++ + M +++ Y+ ++ L
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 371 GKIDHAINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLS 413
GK+D A+ +F+ ++ + F Y++M+ +CKA ++ A L S
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 215/422 (50%), Gaps = 10/422 (2%)
Query: 21 NRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTY 80
N+ +A A++ ++ G PD+VTY +++ C+ D +LN+M A I +VV +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 81 NSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMIC 140
N++I + + ++DL EM GI P+V +YNSL++CL G+ +A+R+ +M+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 141 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
+ P TFN +++ K A ++ + + P+ +TYN+LI G C RL
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 201 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 260
A+ + K + PN TY T++ + ++ + G+E+ M ++G + Y T+I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 261 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 320
F + G A +QMV++ V DI++Y+ L++ C GKL+ A ++ ++K E
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 321 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
+ + + +I+G+CKAG + A + + ++ YN ++ L + A ++F
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 381 ESME----VKDSFTYSSMVH-NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
M+ + +S TY++++ NL R SA L+ ++S + ++ ++V + H
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE--LIKEMRSSGFVGDASTISLVTNMLH 616
Query: 436 SG 437
G
Sbjct: 617 DG 618
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 204/428 (47%), Gaps = 7/428 (1%)
Query: 22 RLEKAEAIIIDGIR---LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
++ K E +I G + LG+ D+ TY++ I+ +C+ +L +M + G PD+V
Sbjct: 95 KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154
Query: 79 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
T +SL+ G + +S ++ L+D+M+EMG PD +++ +L+H LF K EA + M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
+ P T+ ++NGLCK D AL + ++ +V +N +I LCK +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 199 RTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 258
A + E+ G PN +TY +++ C ++ +LS M K + + +
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 259 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
I AF K G+L EA E+M+ + D ++YN LIN +C +L+ A + M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 319 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 378
+ T+ LI+G CK ++ M++ G N Y I+ + G D A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 379 VFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
VF+ M D TYS ++H LC +L +A + KS + + +++G+
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 435 HSGCRREA 442
+G EA
Sbjct: 515 KAGKVGEA 522
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 197/390 (50%), Gaps = 4/390 (1%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+++ A + D ++ P +V +N L+ A + F+ ++ +M+ GIS D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
I R S LS +L +L +M+++G PD+ + +SL++ + +A + M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
P T TF +++GL + A+ + + + G P+LVTY ++ GLCK G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+L ++ + N + + TI+ + R ++ +++ + M+ KG + Y ++I
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
GR +A+ + M+ + ++V++N LI+ + KEGKL A L +EM ++ + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
T+ +LI+G C + A+ ++M N++ YN +++ K +++ + +F
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 382 SME----VKDSFTYSSMVHNLCKAKRLPSA 407
M V ++ TY++++ +A SA
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 187/373 (50%), Gaps = 4/373 (1%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K + + N + + CK +E A + + G+ P+VVTYN LI+ C + +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L+ M E I+P+VVT+N+LI + L + L +EM++ I PD +YN L++
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ DEA ++F+ M+ D P T+N ++NG CK + ++ + +FR + + G V V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
TY +I+G +AG +A+ + K++ + + +TY+ ++ K L I +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
++ + F Y T+I K G++ EA D + ++ D+V+YNT+I+ C + L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLL 551
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
+ A L +M++ G + T+ LI + + + ++ M GF + + +
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
Query: 364 VDRLGKDGKIDHA 376
+ L DG++D +
Sbjct: 612 TNML-HDGRLDKS 623
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 147/302 (48%), Gaps = 4/302 (1%)
Query: 152 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
I+ N L D+A+ +F + K P +V +N L+ + K + + +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
G + + TY+ + C R + L L +L+ M + GY D +++ + R+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
++QMV G + D ++ TLI+ K A L+D+M ++G + D T+ +++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
LCK G+I A L M +N+ +N I+D L K ++ A+++F ME K +
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
TY+S+++ LC R AS+LL + L+ + A++D G EA+K+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 448 KI 449
++
Sbjct: 353 EM 354
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 39/324 (12%)
Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
K D+A +F DM+ P FN +L+ + K + + + +Q G +L TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
I I C+ +L A +L ++ G+ P+ +T ++++ +++ + ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEG----- 301
GY D F + T+I + EA ++QMV G Q D+V+Y T++N CK G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 302 -----KLEAAYL-------------------------LLDEMEKQGFECDKYTHTILIDG 331
K+EAA + L EME +G + T+ LI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 387
LC G A L M + + N+ +N ++D K+GK+ A + E M + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 388 SFTYSSMVHNLCKAKRLPSASKLL 411
+ TY+ +++ C RL A ++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMF 386
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 215 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 274
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 275 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 334
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 335 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 390
A ++ M + G +L Y +V+ L K G ID A+N+ ME +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 391 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
+++++ +LCK + + A L G+R ++++ L + G +A ++ S +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 451 MAKIS 455
KI+
Sbjct: 321 EKKIN 325
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
I ++ +A D MV IV +N L++ K K E L ++M+ G D YT
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 325 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM- 383
++I I+ C+ + A L M K+G++ ++ + +++ +I A+ + + M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 384 ---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
D+FT+++++H L + A L+ ++ G + VV+GL G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 441 EAKKIQSKIRMAKI 454
A + +K+ A+I
Sbjct: 241 LALNLLNKMEAARI 254
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 4/437 (0%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
L+I + C+ +L A + + I+LG PD VT++ LI+ C +++RM
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E G P ++T N+L+ G N +S ++ L+D M+E G P+ +Y ++ + + G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
A + + M + ++I+++GLCK+ DNA +F ++ GF +++ Y LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
+G C AGR +L+++ P+ + ++ ++ C + K + E+ M ++G +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y ++I F K +L +A ++ MV+ G +I ++N LIN YCK ++ L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+M +G D T+ LI G C+ G ++ A+ + M ++ +Y ++D L
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 370 DGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
+G+ + A+ +FE +E D Y+ ++H +C A ++ A L S GV+
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 426 QKAVVDGLRHSGCRREA 442
++ GL G EA
Sbjct: 530 YNIMIGGLCKKGSLSEA 546
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 205/420 (48%), Gaps = 4/420 (0%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
P ++ ++ L + +D + +M GI+ ++ T + +I R LS +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
+ +++++G PD ++++L++ L G+ EA + M+ P T N ++NGLC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
N +A+ + + + GF P VTY ++K +CK+G+ A +L+++ + +A+
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y+ I+ ++ + + M+ KG+ D Y T+I F GR + + M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
+ D+V+++ LI+ + KEGKL A L EM ++G D T+T LIDG CK +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMV 395
A L+ M G N+ +N +++ K ID + +F M V D+ TY++++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
C+ +L A +L + VR + K ++DGL +G +A +I KI +K+
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 180/373 (48%), Gaps = 1/373 (0%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
KL +I + CK L+ A + + G D++ Y LI +C +D G
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L M + I+PDVV +++LI + L + +L EM++ GI PD +Y SL+
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ + D+AN + M+ P TFNI++NG CK D+ L +FR + G V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
TYN LI+G C+ G+L A+ + +E+ P+ ++Y ++ N + + LEI +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
++ D Y +I ++ +A D + GV+ D+ +YN +I CK+G L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
A LL +ME+ G + T+ ILI G+ + +E + + GF + +
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 364 VDRLGKDGKIDHA 376
VD L DG++ +
Sbjct: 604 VDMLS-DGRLKKS 615
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 4/428 (0%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
LN V C ++ A +I + G P+ VTY ++ C+ +L +M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E I D V Y+ +I G ++ L + +L +EM G D+ Y +L+ G+ D
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+ ++ +DMI +TP F+ +++ K A + + + + G P+ VTY LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G CK +L A +L + G PN T+ ++ + GLE+ M +G
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D Y T+I F ++G+L+ A + ++MV+ V+ DIVSY L++ C G+ E A +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+++EK E D + I+I G+C A + A + G +++ YN ++ L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
G + A +F ME + TY+ ++ ++KL+ + G + S
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 426 QKAVVDGL 433
K VVD L
Sbjct: 600 VKMVVDML 607
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
D+A+ +F+ + + P L+ ++ L + + + + K++ G A N T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
+ CC R RK L + + + GY D + T+I GR+ EA + +++MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 343
+ +++ N L+N C GK+ A LL+D M + GF+ ++ T+ ++ +CK+G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 344 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 399
L M + + Y+ I+D L KDG +D+A N+F ME+K D Y++++ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 400 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
A R +KLL +K + A A++D G REA+++ ++ IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 35/260 (13%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FCK N+L+KA ++ + G P++ T+N+LI+ YC+ D G + +M G+ D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VTYN+LI G L + +L EM+ + PD+ SY L+ L G+P++A +F+
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 137 -------------------------------DMICG----DLTPCTATFNIMLNGLCKNR 161
D+ C + P T+NIM+ GLCK
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
A +FR +++ G P TYNILI+ G + +++E+ G + +A T
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 222 TIMKCCFRNRKYKLGLEILS 241
++ R K L++LS
Sbjct: 602 MVVDMLSDGRLKKSFLDMLS 621
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 201/380 (52%), Gaps = 7/380 (1%)
Query: 11 NICVCT-----FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVS-FDAGYTI 64
N+C C FC+ ++L A + + I+LG P +VT+ L++ +C+ +DA Y +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY-M 173
Query: 65 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
++M G P+VV YN++I G ++ + +LDLL+ M + GI PDV +YNSL+ L
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
G+ +A R+ M ++ P TFN +++ K A + + + P++VT
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
Y++LI GLC RL A + + G P+ +TY+ ++ +++K + G+++ M
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
++G + Y +I + + G+L A + +MV GV +I++YN L++ C GK+E
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
A ++L +M+K G + D T+ I+I G+CKAG + A +N G ++ Y ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 365 DRLGKDGKIDHAINVFESME 384
L K G A +F M+
Sbjct: 474 LGLYKKGLRREADALFRKMK 493
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 201/416 (48%), Gaps = 4/416 (0%)
Query: 39 LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
LP + ++ L+ A + +D + +M+ GI ++ T N L+ R S LS +L
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
L +M+++G P + ++ SL++ + + +A +F M+ P +N +++GLC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
K++ DNAL + ++K G P++VTYN LI GLC +GR A ++ + P+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
T+ ++ C + + E M R+ D Y +I RL EA + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
V+ G D+V+Y+ LIN YCK K+E L EM ++G + T+TILI G C+AG +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSM 394
A M G N+ YN ++ L +GKI+ A+ + M+ D TY+ +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
+ +CKA + A + S G+ ++ GL G RREA + K++
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 161/314 (51%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K + + N + CK+ +++ A ++ + G+ PDVVTYN LI C +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+++ M + I PDV T+N+LI + +S + + +EM+ + PD+ +Y+ L++ L
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ DEA +F M+ P T++I++NG CK++ ++ +++F + + G V V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
TY ILI+G C+AG+L A I + + G PN ITY ++ N K + L IL+ M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
++ G D Y +I K G + +A D + G+ DI +Y T++ K+G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 304 EAAYLLLDEMEKQG 317
A L +M++ G
Sbjct: 483 READALFRKMKEDG 496
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
C +RL++AE + + G PDVVTY++LI+ YC+ + G + M + G+ +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VTY LI G R L+ + ++ M+ G+ P++ +YN L+H L GK ++A +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
DM + T+NI++ G+CK +A ++ L G +P++ TY ++ GL K G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 197 RLRTARWILKELGDSGHAPN 216
R A + +++ + G PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
R+ Y+ +G Y ++ ++ +L ++ D MV I ++ L++ K K +
Sbjct: 40 RRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
L ++M+ G + T IL++ C+ + A L M K+G + ++ + ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 365 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
+ + ++ A+ +F+ M + Y++++ LCK+K++ +A LL K G+
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQS 447
+++ GL SG +A ++ S
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVS 245
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 213/444 (47%), Gaps = 4/444 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + C+ R+++A +++ G PDV++Y+ +++ YC+F D + ++ M+
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ P+ Y S+I R L+ + + EM+ GI PD Y +L+ + G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A++ F +M D+TP T+ +++G C+ A ++F + G P+ VT+ LI
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
G CKAG ++ A + + +G +PN +TYTT++ + E+L M + G
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
+ F Y +++ K G ++EA + + G+ D V+Y TL++ YCK G+++ A +L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
EM +G + T +L++G C G ++ L +M G N +N +V +
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
+ A +++ M + D TY ++V CKA+ + A L G + S
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 427 KAVVDGLRHSGCRREAKKIQSKIR 450
++ G EA+++ ++R
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMR 693
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 6/400 (1%)
Query: 26 AEAIII--DGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSL 83
A AII+ + +GV +V +YN++I CQ + +L M G +PDV++Y+++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 84 IAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDL 143
+ G R L L++ M G+ P+ + Y S++ L ++ K EA F +MI +
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 144 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 203
P T + +++G CK A + F + P+++TY +I G C+ G + A
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 204 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 263
+ E+ G P+++T+T ++ + K + + M + G + + Y T+I
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 264 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 323
K G L A + + +M G+Q +I +YN+++N CK G +E A L+ E E G D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 324 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
T+T L+D CK+G + A+ L+ M G + +N +++ G ++ + M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
K ++ T++S+V C L +A+ + GV
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 35/401 (8%)
Query: 18 CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
C+ +L +AE + IR G+LPD V Y LID +C+ A M I+PDV
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 78 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
+TY ++I+G + + + L EM G+ PD ++ L++ + G +A RV
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 197
MI +P T+ +++GLCK D+A + + K G P + TYN ++ GLCK+G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDG 252
+ A ++ E +G + +TYTT+M ++ + EIL M KG TF+
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 253 F--GYC------------------------TVIAAFVKI----GRLKEATDYMEQMVTDG 282
G+C T + VK LK AT + M + G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
V D +Y L+ +CK ++ A+ L EM+ +GF T+++LI G K AR
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 343 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
+ M + G ++ E ++ D K + D ++ + +
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 177/382 (46%), Gaps = 44/382 (11%)
Query: 105 EMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRY-T 163
+ G P V ++ L G EA RVF+ M+ L + N+ L L K+ Y T
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
A+ +FR + G + +YNI+I +C+ GR++ A +L + G+ P+ I+Y+T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 224 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 283
+ R + +++ MKRKG + + Y ++I +I +L EA + +M+ G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 284 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK---------------------------- 315
D V Y TLI+ +CK G + AA EM
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 316 -------QGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRL 367
+G E D T T LI+G CKAG++K A R+H +M + G N+ Y ++D L
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGL 466
Query: 368 GKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
K+G +D A + M + FTY+S+V+ LCK+ + A KL+ +G+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 424 SAQKAVVDGLRHSGCRREAKKI 445
++D SG +A++I
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEI 548
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N V +C N L+ A AI D GV PD TY L+ +C+ + + + M+
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
G S V TY+ LI G + + ++ D+M G+ D ++ ++ +PD
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 192/399 (48%), Gaps = 4/399 (1%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K++ L I V C+ +EK++ +I + G+ P+ TYN +I+AY + F
Sbjct: 221 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEG 280
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L M++ G+ + VTY L+ + +N +S + L DEM E GI DV Y SL+
Sbjct: 281 VLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC 340
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ G A +F ++ L+P + T+ +++G+CK A + +Q G V
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
+N LI G C+ G + A I + G + T TI C R ++Y + L M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
G Y +I + K G ++EA +M + GVQ + ++YN +I YCK+GK+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
+ A L ME G + D YT+T LI G C A N+ A M G D N Y +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 398
+ L K GK D A +++ M+ K D+ Y++++ ++
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 181/404 (44%), Gaps = 5/404 (1%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
GV V + ++++ C+ + ++ GI P+ TYN++I + S
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
+L M + G+ + +Y LM + GK +A ++F +M + + +++
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
C+ A +F L + G P TY LI G+CK G + A ++ E+ G
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
+ + T++ R I M++KG+ D F T+ + F ++ R EA ++
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
+M+ GV+L VSY LI++YCKEG +E A L EM +G + + T+ ++I CK G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
IK AR M G D + Y ++ +D A+ +F M +K +S TY+
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 436
M+ L KA + A L + G I A++ G HS
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI-GSMHS 621
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 6/325 (1%)
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
G +E RVF M+ L+ + + L K R D L +FR + G + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLE-ILSAMK 244
I+++GLC+ G + ++ ++KE G P A TY TI+ + R + G+E +L MK
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVLKVMK 286
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
+ G ++ Y ++ VK G++ +A ++M G++ D+ Y +LI+ C++G ++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
A+LL DE+ ++G YT+ LIDG+CK G + A + + M G + +N ++
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 365 DRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
D + G +D A +++ ME K D FT +++ + KR A + L ++ GV+
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 421 ILKSAQKAVVDGLRHSGCRREAKKI 445
+ + ++D G EAK++
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRL 491
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 58 FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNS 117
F+ G + + M + G+S D + + A + + L++ M++ G+ V+S
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 118 LMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
++ L + G+ +++ ++ ++ + P T+N ++N K R + + ++K G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
V VTY +L++ K G++ A + E+ + G + YT+++ R K
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
+ + KG + + Y +I K+G + A M +M + GV + V +NTLI+ Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYT--------------------------------- 324
C++G ++ A ++ D ME++GF+ D +T
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 325 --HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
+T LID CK GN++ A+ M+ G N YN ++ K GKI A + +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
ME DS+TY+S++H C A + A +L G+ ++ GL +G
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 439 RREA 442
EA
Sbjct: 590 SDEA 593
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 213/419 (50%), Gaps = 5/419 (1%)
Query: 23 LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
+++ + + ++ + V P++ TYN +++ YC+ + + ++++ EAG+ PD TY S
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 83 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
LI G + L + + +EM G + +Y L+H L + DEA +F M +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
P T+ +++ LC + AL + + +++ G P + TY +LI LC + AR
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 203 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 262
+L ++ + G PN ITY ++ + + ++++ M+ + + + Y +I +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 263 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 322
K + +A + +M+ V D+V+YN+LI+ C+ G ++AY LL M +G D+
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 323 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 382
+T+T +ID LCK+ ++ A + + + G + N+ Y ++D K GK+D A + E
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 383 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
M K +S T+++++H LC +L A+ L +K G++ S ++ L G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 195/397 (49%), Gaps = 20/397 (5%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
+TR N + +CK+N + KA ++ + VLPDVVTYN LID C+ +FD+ Y +L
Sbjct: 427 NTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
+ M + G+ PD TY S+I ++ + + DL D + + G+ P+V Y +L+ +
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
GK DEA+ + + M+ + P + TFN +++GLC + A + + K G P + T
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
ILI L K G A +++ SG P+A TYTT ++ R + ++++ M+
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN--LYCKEGK- 302
G + D F Y ++I + +G+ A D +++M G + ++ +LI L K GK
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 303 ---------------LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEY 347
+ LL++M + + ++ LI G+C+ GN++ A ++
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 348 MNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
M + G + +N ++ K K + A V + M
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 183/374 (48%), Gaps = 5/374 (1%)
Query: 80 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
YN+L+ R L+ + EMLE + P++++YN +++ +LG +EAN+ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
L P T+ ++ G C+ + D+A ++F + G V Y LI GLC A R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
A + ++ D P TYT ++K + + L ++ M+ G + Y +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 319
+ + ++A + + QM+ G+ ++++YN LIN YCK G +E A +++ ME +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 320 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 379
+ T+ LI G CK+ N+ A L M + ++ YN ++D + G D A +
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 380 FESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 435
M V D +TY+SM+ +LCK+KR+ A L S + GV A++DG
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 436 SGCRREAKKIQSKI 449
+G EA + K+
Sbjct: 545 AGKVDEAHLMLEKM 558
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 188/402 (46%), Gaps = 20/402 (4%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ CK+ R+E+A + + GV P+VV Y LID YC+ D + +L +M P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
+ +T+N+LI G + L + L ++M+++G+ P V + L+H L + G D A F
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
Q M+ P T+ + C+ +A M ++++G P+L TY+ LIKG
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMK-----------------CCFRNR-KYKLGL 237
G+ A +LK + D+G P+ T+ +++K C N ++ +
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINL 296
E+L M T + Y +I ++G L+ A + M +G+ + +N L++
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 297 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 356
CK K A ++D+M G + +LI GL K G + + + + G+ +
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 357 LEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
A+ I+D +GK G ++ +F ME K+ +SS ++L
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVME-KNGCKFSSQTYSL 906
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 154/341 (45%), Gaps = 19/341 (5%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N + C +L++A + +++G+ P V T +LI + FD Y+ +M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
+G PD TY + I R L + D++ +M E G+ PD+++Y+SL+ LG+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT------------------DNALRMFR 171
A V + M P TF ++ L + +Y D + +
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 172 GLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTTIMKCCFRN 230
+ +H P +Y LI G+C+ G LR A + + + G +P+ + + ++ CC +
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
+K+ +++ M G+ +I K G + T + ++ G D +++
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
+I+ K+G +EA Y L + MEK G + T+++LI+G
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
YN L+ L + G + + + E+ + PN TY ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN------------------- 226
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
GYC K+G ++EA Y+ ++V G+ D +Y +LI YC+ L+
Sbjct: 227 ---------GYC-------KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
+A+ + +EM +G ++ +T LI GLC A I A M + Y ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 365 DRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
L + A+N+ + ME +K + TY+ ++ +LC + A +LL L+ G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 421 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
A+++G G +A + + K+S
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 228/461 (49%), Gaps = 29/461 (6%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N V CK +++ AE I+ R G PDV++YN LID +C+ + +L +R
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 70 EAG---ISPDVVTYNSLIAGATRNSLLSCSLDLLDEM-LEMGI-----PPDVWSYNSLMH 120
+ PD+V++NSL G ++ + +LDE+ + MG+ P+V +Y++ +
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171
Query: 121 CLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
+ G+ A + F M L+P TF +++G CK + A+ +++ +++
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
+VTY LI G CK G ++ A + + + PN++ YTTI+ F+ ++ L
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
+ M +G D Y +I+ G+LKEAT+ +E M + D+V + T++N Y K
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH--LEYMNKIGFDSNLE 358
G+++AA + ++ ++GFE D + +IDG+ K G + A ++ +E N +
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV------- 404
Query: 359 AYNCIVDRLGKDGKIDHAINVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSC 414
Y ++D L K+G +F E+ V D F Y+S + LCK L A KL
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 415 LKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 455
++ G+ + A ++ GL G EA+++ ++ + IS
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 157/346 (45%), Gaps = 5/346 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
+CKA LE A ++ + R+ + +VVTY LID +C+ + +RM E + P+
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
+ Y ++I G + ++ L +ML G+ D+ +Y ++ L GK EA + +
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
DM DL P F M+N K+ A+ M+ L + GF P++V + +I G+ K G
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
+L A N + YT ++ + + + S + G D F Y
Sbjct: 388 QLHEAIVYF-----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYT 442
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
+ IA K G L +A +MV +G+ LD+++Y TLI +G + A + DEM
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502
Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
G D +LI K GN+ A L M + G + + +C
Sbjct: 503 GISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 184/386 (47%), Gaps = 8/386 (2%)
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
L+R+R++ PD T N I ++ SL L ++ G P S+NS++ +
Sbjct: 8 FLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVC 67
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFV--P 180
+LG+ A + M P ++N +++G C+N +A + L+ HGF+ P
Sbjct: 68 KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127
Query: 181 ELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
++V++N L G K L ++ + +PN +TY+T + ++ + +L L+
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
+MKR + + + +I + K G L+ A ++M + L++V+Y LI+ +CK+
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
G+++ A + M + E + +T +IDG + G+ A L M G ++ AY
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 361 NCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 416
I+ L +GK+ A + E ME V D +++M++ K+ R+ +A + ++
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Query: 417 SGVRILKSAQKAVVDGLRHSGCRREA 442
G A ++DG+ +G EA
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 41/293 (13%)
Query: 198 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 257
+R A L L S + P+ T + + L L+ L+ + +GYT + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 258 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQ 316
V++ K+G++K A D + M G + D++SYN+LI+ +C+ G + +A L+L+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 317 GFEC------------------------------------DKYTHTILIDGLCKAGNIKG 340
GF C + T++ ID CK+G ++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 341 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVH 396
A M + N+ + C++D K G ++ A+++++ M V+ S TY++++
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
CK + A ++ ++ V ++DG G A K +K+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 5/244 (2%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
+L + + C +L++A I+ D + ++PD+V + +++AY + A
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+ +++ E G PDVV +++I G +N L ++ +E DV Y L+ L
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA--NDVM-YTVLIDALC 414
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ G E R+F + L P + + GLCK +A ++ + + G + +L+
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
Y LI GL G + AR + E+ +SG +P++ + +++ + ++L M
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Query: 244 KRKG 247
+R+G
Sbjct: 535 QRRG 538
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 214/433 (49%), Gaps = 4/433 (0%)
Query: 22 RLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYN 81
+ + A ++ + ++ +P +V + ++ + FD + ++M GIS D+ ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 82 SLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICG 141
LI R S LS +L LL +M+++G P + + SL++ Q + EA + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 142 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 201
P +N ++NGLCKNR +NAL +F ++K G + VTYN LI GL +GR A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 202 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 261
+L+++ PN I +T ++ + + M R+ + F Y ++I
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 262 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 321
F G L +A + MV+ G D+V+YNTLI +CK ++E L EM QG D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 322 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+T+ LI G C+AG + A+ M G ++ YN ++D L +GKI+ A+ + E
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 382 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
++ D TY+ ++ LC+ +L A L S + GV+ A ++ GL G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 438 CRREAKKIQSKIR 450
+REA K+ +++
Sbjct: 479 LQREADKLCRRMK 491
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 200/388 (51%), Gaps = 1/388 (0%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
I + FC+ +RL A A++ ++LG P +VT L++ +CQ F ++++ M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
G P+VV YN++I G +N L+ +L++ M + GI D +YN+L+ L G+
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+A R+ +DM+ + P F +++ K A +++ + + VP + TYN LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G C G L A+++ + G P+ +TY T++ ++++ + G+++ M +G
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D F Y T+I + + G+L A +MV GV DIV+YN L++ C GK+E A ++
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+++++K + D T+ I+I GLC+ +K A + + G + AY ++ L +
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 370 DGKIDHAINVFESMEVKDSFTYSSMVHN 397
G A + M+ +D F S +++
Sbjct: 477 KGLQREADKLCRRMK-EDGFMPSERIYD 503
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC L A+ + + G PDVVTYN LI +C+ + G + M G+ D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
TYN+LI G + L+ + + + M++ G+ PD+ +YN L+ CL GK ++A + +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
D+ ++ T+NI++ GLC+ A +FR L + G P+ + Y +I GLC+ G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
R A + + + + G P+ Y + R+ L E++ A
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKA 520
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 287 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 346
IV + ++ + K K + L +ME G D Y+ TILI C+ + A L
Sbjct: 79 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 138
Query: 347 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 402
M K+GF ++ +++ + + A+++ +SM+ V + Y+++++ LCK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 403 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
L +A ++ K G+R ++ GL +SG +A ++ + KI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
>sp|A3KPF8|PP131_ARATH Pentatricopeptide repeat-containing protein At1g79080,
chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2
SV=1
Length = 576
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 220/445 (49%), Gaps = 7/445 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
CKANRL+KA +I + G++PD Y L++ C+ + ++ +M + G +
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VTYN+L+ G L+ SL ++ +++ G+ P+ ++Y+ L+ ++ DEA ++
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 235
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
++I P ++N++L G CK TD+A+ +FR L GF +V+YNIL++ LC G
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF--DGFG 254
R A +L E+ AP+ +TY ++ + + + L++L M + + F
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
Y VIA K G++ +++M+ + + +YN + +L K++ A+ ++ +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
+ C + +I LC+ GN A L M + GFD + Y+ ++ L +G
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFT 475
Query: 375 HAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
A+ V ME ++ +++M+ LCK +R A ++ ++ ++ +
Sbjct: 476 GAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAIL 535
Query: 430 VDGLRHSGCRREAKKIQSKIRMAKI 454
V+G+ H AK++ ++R+ K+
Sbjct: 536 VEGIAHEDELELAKEVLDELRLRKV 560
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 93 LSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI 152
LS S L+ ++ G P+V L++ L + + +A RV + M+ + P + +
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 153 MLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
++N LCK A+++ ++ HG+ VTYN L++GLC G L + ++ L G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
APNA TY+ +++ ++ R +++L + KG + Y ++ F K GR +A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGL 332
++ G + ++VSYN L+ C +G+ E A LL EM+ T+ ILI+ L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 333 CKAGNIKGARLHLEYMNKIG--FDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
G + A L+ M+K F +YN ++ RL K+GK+D + + M
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 183/413 (44%), Gaps = 42/413 (10%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
+T N V C L ++ + ++ G+ P+ TY+ L++A + D +L
Sbjct: 175 NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
+ + G P++V+YN L+ G + ++ L E+ G +V SYN L+ CL
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQK--HGFVPELV 183
G+ +EAN + +M GD P T+NI++N L + T+ AL++ + + K H F
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
+YN +I LCK G++ L E+ PN TY I C N K + I+ ++
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
K CT D+ Y ++I C++G
Sbjct: 415 SNKQKC------CT--------------HDF---------------YKSVITSLCRKGNT 439
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI-GFDSNLEAYNC 362
AA+ LL EM + GF+ D +T++ LI GLC G GA L M + ++ +N
Sbjct: 440 FAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNA 499
Query: 363 IVDRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLL 411
++ L K + D A+ VFE M + + TY+ +V + L A ++L
Sbjct: 500 MILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 6/212 (2%)
Query: 205 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 264
L+ L GH PN T ++ + + K + ++ M G D Y ++ K
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 265 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 324
G + A +E+M G + V+YN L+ C G L + ++ + ++G + +T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 325 HTILIDGLCKA-GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 383
++ L++ K G + +L E + K G + NL +YN ++ K+G+ D A+ +F +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVK-GGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 384 EVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
K + +Y+ ++ LC R A+ LL
Sbjct: 273 PAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
L ++ ++E +VT G + ++ L+ CK +L+ A +++ M G D +T
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 328 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 386
L++ LCK GN+ A +E M G+ SN YN +V L G ++ ++ E + K
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 387 ---DSFTYSSMVHNLCKAKRLPSASKLL 411
++FTYS ++ K + A KLL
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
E L ++ L+ + G + + T L+ LCKA +K A +E M G + A
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
Y +V++L K G + +A+ + E ME ++ TY+++V LC L + + + +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 416 KSGV 419
+ G+
Sbjct: 204 QKGL 207
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 200/402 (49%), Gaps = 4/402 (0%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
P+ V+Y++LI C+ + + + ++M E G P TY LI L+ + +L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
DEM+ G P+V +Y L+ L + GK +EAN V + M+ + P T+N ++NG CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
+ A + ++K P + T+N L++GLC+ G+ A +LK + D+G +P+ ++
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y ++ R ++LS+M D + +I AF K G+ A+ ++ M+
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIK 339
G+ LD V+ TLI+ CK GK A +L+ + K ++ +++D L K +K
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 340 GARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
L +NK+G ++ Y +VD L + G I + + E M++ + + Y+ ++
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 437
+ LC+ R+ A KLL + SGV +V G ++G
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 195/403 (48%), Gaps = 6/403 (1%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
STR + + C ++KA + + I G P+V TY +LID C+ + +
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
+M + I P V+TYN+LI G ++ + + +LL M + P+V ++N LM L ++
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
GKP +A + + M+ L+P ++N++++GLC+ + + A ++ + P+ +T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
+I CK G+ A L + G + + +T TT++ + K + L IL + +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
++ K ++KE + ++ G+ +V+Y TL++ + G +
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
++ +L+ M+ G + Y +TI+I+GLC+ G ++ A L M G N Y +V
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 366 RLGKDGKIDHAINVFESM-----EVKDSFTYSSMVHNLCKAKR 403
+GK+D A+ +M E+ D YSS++ +++
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRI-YSSLLQGFVLSQK 701
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 208/487 (42%), Gaps = 60/487 (12%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
C+ ++E+A + ++ + P V+TYN LI+ YC+ + +L M + P+
Sbjct: 346 LCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
V T+N L+ G R ++ LL ML+ G+ PD+ SYN L+ L + G + A ++
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
M C D+ P TF ++N CK D A + + G + VT LI G+CK G
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 197 RLRTARWILKEL-----------------------------------GDSGHAPNAITYT 221
+ R A +IL+ L G P+ +TYT
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
T++ R+ IL MK G + + Y +I + GR++EA + M
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC-------- 333
GV + V+Y ++ Y GKL+ A + M ++G+E + ++ L+ G
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDN 705
Query: 334 ----KAGNIKGARLHLEYMNKI--------GFDSNLEAYNCIVDRLGKDGKIDHAINVFE 381
+I E +N++ G S L + +V RL K+G+ D + ++ +
Sbjct: 706 SEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQ 763
Query: 382 SMEVKDSFTYSSM---VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 438
++ + F +M + + C K+ +L+ LKSG + V+ GL+ G
Sbjct: 764 NVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGD 823
Query: 439 RREAKKI 445
A+++
Sbjct: 824 AERAREL 830
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 153 MLNGLCKNRYTDNALRMFRGLQKH-GFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 211
+L G C+ +AL++F + K P V+Y+ILI GLC+ GRL A + ++G+
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 212 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 271
G P+ TYT ++K + M +G + Y +I + G+++EA
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
+MV D + +++YN LIN YCK+G++ A+ LL MEK+ + + T L++G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KD 387
LC+ G A L+ M G ++ +YN ++D L ++G ++ A + SM D
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
T++++++ CK + AS L L+ G+ + + ++DG+ G R+A I
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILE 535
Query: 448 ---KIRMAKISH 456
K+R+ H
Sbjct: 536 TLVKMRILTTPH 547
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 170/427 (39%), Gaps = 89/427 (20%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K + R N + C+ + KA ++ + G+ PD+V+YN+LID C+ + Y
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+L+ M I PD +T+ ++I + + L ML GI D + +L+ +
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
++GK +A + + ++ + + N++L+ L K L M + K G VP +V
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 184 TYN-----------------------------------ILIKGLCKAGRLRTARWILKEL 208
TY I+I GLC+ GR+ A +L +
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV----- 263
DSG +PN +TYT ++K N K LE + AM +GY + Y +++ FV
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 264 ------------------------------------------------KIGRLKEATDYM 275
K GR E+ D +
Sbjct: 703 IDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLV 762
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
+ ++ GV L+ + + ++ YC + K L+ + K GF + ++I GL K
Sbjct: 763 QNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKE 821
Query: 336 GNIKGAR 342
G+ + AR
Sbjct: 822 GDAERAR 828
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 5/285 (1%)
Query: 170 FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFR 229
+R ++ GFV ++ Y ++ LCK G A + ++ G ++ T+++ R
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 230 NRKYKLGLEILSAMKRK-GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
+ L++ M ++ + Y +I ++GRL+EA +QM G Q
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 289 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 348
+Y LI C G ++ A+ L DEM +G + + +T+T+LIDGLC+ G I+ A M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 349 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 404
K ++ YN +++ KDG++ A + ME + + T++ ++ LC+ +
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 405 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
A LL L +G+ + ++DGL G A K+ S +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 54/243 (22%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G LP+V Y ++I+ CQF + +L+ M+++G+SP+ VTY ++ G N L +
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMH------------------------------------ 120
L+ + M+E G + Y+SL+
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISV 730
Query: 121 -----------CLFQL------GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYT 163
C+F + G+ DE+N + Q+++ + +I++ C +
Sbjct: 731 VEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF-LEKAMDIIMESYCSKKKH 789
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 223
+ + + K GFVP ++ ++I+GL K G AR ++ EL S T
Sbjct: 790 TKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTY 849
Query: 224 MKC 226
++C
Sbjct: 850 VEC 852
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 164 DNALRMFRGLQKHG-FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
D +R F + KH + + N L+K + +G R A ++
Sbjct: 84 DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI---------------VA 128
Query: 223 IMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 280
++K C R K L L R+ G+ + Y +++ + K+ A +M
Sbjct: 129 LIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 281 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 340
DG + ++ Y T++N CK G EAA + + ++ K GF D + T L+ G C+ N++
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 341 ARLHLEYMNK-IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMV 395
A + M+K + N +Y+ ++ L + G+++ A + + M K + TY+ ++
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 396 HNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
LC + A L + G + ++DGL G EA + K+ +I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 219/453 (48%), Gaps = 7/453 (1%)
Query: 7 TRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILN 66
TR N + F K + + + D I G P V TYN++ID C+ +A +
Sbjct: 227 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286
Query: 67 RMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLG 126
M+ G+ PD VTYNS+I G + L ++ +EM +M PDV +YN+L++C + G
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 127 KPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYN 186
K +++M L P +++ +++ CK A++ + +++ G VP TY
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 187 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
LI CK G L A + E+ G N +TYT ++ + K E+ M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
G + Y +I FVK + A + + ++ G++ D++ Y T I C K+EAA
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
++++EM++ G + + +T L+D K+GN L+ M ++ + + + ++D
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 367 LGKDGKIDHAINVFESME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRI 421
L K+ + A++ F + ++ +++M+ LCK ++ +A+ L ++ G+
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 422 LKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
++A +++DG G EA ++ K MA+I
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDK--MAEI 677
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 184/374 (49%), Gaps = 1/374 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCK +L + G+ P+VV+Y+ L+DA+C+ MR
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ P+ TY SLI + LS + L +EML++G+ +V +Y +L+ L + E
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A +F M + P A++N +++G K + D AL + L+ G P+L+ Y I
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
GLC ++ A+ ++ E+ + G N++ YTT+M F++ GL +L MK
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+C +I K + +A DY ++ D G+Q + + +I+ CK+ ++EAA L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
++M ++G D+ +T L+DG K GN+ A + M +IG +L AY +V L
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 370 DGKIDHAINVFESM 383
++ A + E M
Sbjct: 696 CNQLQKARSFLEEM 709
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 4/385 (1%)
Query: 75 PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRV 134
P +++L + +L ++ +M + P S N L+H +LGK D+ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 135 FQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK 194
F+DMI P T+NIM++ +CK + A +F ++ G VP+ VTYN +I G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 195 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
GRL +E+ D P+ ITY ++ C + K +GLE MK G +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
Y T++ AF K G +++A + M G+ + +Y +LI+ CK G L A+ L +EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
+ G E + T+T LIDGLC A +K A M+ G NL +YN ++ K +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 375 HAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVV 430
A+ + ++ + D Y + + LC +++ +A ++ + G++ ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 431 DGLRHSGCRREAKKIQSKIRMAKIS 455
D SG E + +++ I
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIE 574
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 1/272 (0%)
Query: 18 CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
C A R+++AE + GV+P++ +YN LI + + + D +LN ++ GI PD+
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 78 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
+ Y + I G + + +++EM E GI + Y +LM F+ G P E + +
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 138 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKAG 196
M D+ TF ++++GLCKN+ A+ F R G + +I GLCK
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
++ A + +++ G P+ YT++M F+ L + M G D Y
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 288
+++ +L++A ++E+M+ +G+ D V
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 54/372 (14%)
Query: 103 MLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD-------------------- 142
M G V SY + H LF +AN V ++M+
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 143 ------------------------------LTPCTATFNIMLNGLCKNRYTDNALRMFRG 172
+ P T + N +L+ K TD+ R F+
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 173 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 232
+ G P + TYNI+I +CK G + AR + +E+ G P+ +TY +++ + +
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 233 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 292
+ MK D Y +I F K G+L ++ +M +G++ ++VSY+T
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
L++ +CKEG ++ A +M + G ++YT+T LID CK GN+ A M ++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSAS 408
+ N+ Y ++D L ++ A +F M+ + + +Y++++H KAK + A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 409 KLLLSCLKSGVR 420
+LL G++
Sbjct: 493 ELLNELKGRGIK 504
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 173/325 (53%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC+ RL A + + ++LG P +VT+ L++ +C F ++++++ G P+
Sbjct: 124 FCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPN 183
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VV YN++I ++ +LD+L M +MGI PDV +YNSL+ LF G + R+
Sbjct: 184 VVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILS 243
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
DM+ ++P TF+ +++ K A + + + + P +VTYN LI GLC G
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
L A+ +L L G PNA+TY T++ + ++ G++IL M R G D F Y
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
T+ + + G+ A + +MV+ GV D+ ++N L++ C GK+ A + L++++K
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Query: 317 GFECDKYTHTILIDGLCKAGNIKGA 341
T+ I+I GLCKA ++ A
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDA 448
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 201/416 (48%), Gaps = 4/416 (0%)
Query: 39 LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
LP +V ++ L+ A + ++A ++ + GIS D+ ++ +LI R + LS +L
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
L +M+++G P + ++ SL++ + + EA + ++ P +N +++ LC
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
+ + AL + + ++K G P++VTYN LI L +G + IL ++ G +P+ I
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
T++ ++ + + + + M ++ + Y ++I G L EA + +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
V+ G + V+YNTLIN YCK +++ +L M + G + D +T+ L G C+AG
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSM 394
A L M G ++ +N ++D L GKI A+ E ++ V TY+ +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 395 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 450
+ LCKA ++ A L S GV ++ GLR REA ++ K++
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 120/231 (51%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ K +L +A+ + I+ V P++VTYN LI+ C D +LN + G P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
+ VTYN+LI G + + + +L M G+ D ++YN+L Q GK A +V
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
M+ + P TFNI+L+GLC + AL LQK V ++TYNI+IKGLCKA
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 196 GRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
++ A ++ L G +P+ ITY T+M R R ++ E+ M+++
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 149/306 (48%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + + C+ ++ A ++ ++G+ PDVVTYN LI ++ IL+ M
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
GISPDV+T+++LI + L + +EM++ + P++ +YNSL++ L G DE
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A +V ++ P T+N ++NG CK + D+ +++ + + G + TYN L +
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
G C+AG+ A +L + G P+ T+ ++ + K L L +++
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
Y +I K ++++A + GV D+++Y T++ ++ A+ L
Sbjct: 428 GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487
Query: 311 DEMEKQ 316
+M+K+
Sbjct: 488 RKMQKE 493
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + +CKA R++ I+ R GV D TYN L YCQ F A +L RM
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+ PD+ T+N L+ G + + +L L+++ + + +YN ++ L + K ++
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH-GFVP 180
A +F + ++P T+ M+ GL + R A ++R +QK G +P
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 31/201 (15%)
Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
+ ++ A K+ + + + G+ D+ S+ TLI+ +C+ +L A L +M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 315 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 374
K GFE T L++G C A ++ + +G++ N+ YN I+D
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID--------- 192
Query: 375 HAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLR 434
+LC+ ++ +A +L K G+R +++ L
Sbjct: 193 ----------------------SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 435 HSGCRREAKKIQSKIRMAKIS 455
HSG + +I S + IS
Sbjct: 231 HSGTWGVSARILSDMMRMGIS 251
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 195/374 (52%), Gaps = 3/374 (0%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
NI + C+ +R A +++ ++ G PDVVT + LI+ +CQ ++++M E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PDVV YN++I G+ + L++ +++L D M G+ D +YNSL+ L G+ +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A R+ +DM+ D+ P TF +++ K A++++ + + P++ TYN LI
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
GLC GR+ A+ +L + G P+ +TY T++ ++++ G ++ M ++G
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D Y T+I + + GR A + +M + + +I +Y+ L+ C ++E A +L
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
+ M+K E D T+ I+I G+CK GN++ A ++ G ++ +Y ++ +
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 371 GKIDHAINVFESME 384
+ D + ++ M+
Sbjct: 465 RQWDKSDLLYRKMQ 478
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 191/384 (49%), Gaps = 44/384 (11%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G+ D+ +YN++I+ C+ F +++ +M + G PDVVT +SLI G + + + +
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
+DL+ +M EMG PDV YN++ ++G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTI-----------------------------------IDG 183
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
CK ++A+ +F +++ G + VTYN L+ GLC +GR A +++++ PN
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
IT+T ++ + K+ +++ M R+ D F Y ++I GR+ EA ++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
MVT G D+V+YNTLIN +CK +++ L EM ++G D T+ +I G +AG
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
A+ E +++ N+ Y+ ++ L + +++ A+ +FE+M+ D TY+
Sbjct: 364 RPDAAQ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 393 SMVHNLCKAKRLPSASKLL--LSC 414
++H +CK + A L LSC
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSC 444
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 38/337 (11%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC+ NR+ A ++ +G PDVV YN +ID C+ + + +RM G+ D
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 77 VVTYNSLIAGA-----------------------------------TRNSLLSCSLDLLD 101
VTYNSL+AG + S ++ L +
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 102 EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNR 161
EM + PDV++YNSL++ L G+ DEA ++ M+ P T+N ++NG CK++
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 162 YTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYT 221
D ++FR + + G V + +TYN +I+G +AGR A+ I + DS PN TY+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-DS--RPNIRTYS 385
Query: 222 TIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD 281
++ N + + L + M++ D Y VI KIG +++A D +
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 282 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 318
G++ D+VSY T+I+ +C++ + + + LL +M++ G
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 38/397 (9%)
Query: 39 LPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLD 98
LP +V ++ ++ + ++D ++ + M GI D+ +YN +I R S +L
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 99 LLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
++ +M++ G PDV + +SL++ Q + +A + M P +N +++G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 159 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 218
K ++A+ +F +++ G + VTYN L+ GLC +GR A +++++ PN I
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 219 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 278
T+T VI FVK G+ EA E+M
Sbjct: 246 TFTA-----------------------------------VIDVFVKEGKFSEAMKLYEEM 270
Query: 279 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
V D+ +YN+LIN C G+++ A +LD M +G D T+ LI+G CK+ +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 339 -KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF-TYSSMVH 396
+G +L E M + G + YN I+ + G+ D A +F M+ + + TYS +++
Sbjct: 331 DEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389
Query: 397 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 433
LC R+ A L + KS + + + V+ G+
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 161/326 (49%), Gaps = 6/326 (1%)
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
+E +F MI P F+ +L+ + K++ D + +F ++ G +L +YNI+
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKG 247
I LC+ R A ++ ++ G+ P+ +T ++++ C NR + ++++S M+ G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMG 169
Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
+ D Y T+I KIG + +A + ++M DGV+ D V+YN+L+ C G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
L+ +M + + T T +ID K G A E M + D ++ YN +++ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 368 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 423
G++D A + + M K D TY+++++ CK+KR+ +KL + G+
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 424 SAQKAVVDGLRHSGCRREAKKIQSKI 449
++ G +G A++I S++
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
F K + +A + + R V PDV TYN LI+ C D +L+ M G P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
DVVTYN+LI G ++ + L EM + G+ D +YN+++ FQ G+PD A +F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 136 --------------------------------QDMICGDLTPCTATFNIMLNGLCKNRYT 163
++M ++ T+NI+++G+CK
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 164 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
++A +FR L G P++V+Y +I G C+ + + + +++ + G P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + FCK+ R+++ + + + G++ D +TYN +I Y Q DA I +RM
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
P++ TY+ L+ G N + +L L + M + I D+ +YN ++H + ++G ++
Sbjct: 378 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP 180
A +F+ + C L P ++ M++G C+ R D + ++R +Q+ G +P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 39/221 (17%)
Query: 268 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 327
L+E D +M+ IV ++ +++ K + L ME G D Y++ I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 328 LIDGLCK------AGNIKGARLHLEY-----------------------------MNKIG 352
+I+ LC+ A ++ G + Y M ++G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 408
F ++ YN I+D K G ++ A+ +F+ ME D+ TY+S+V LC + R A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 409 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
+L+ + + AV+D G EA K+ ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%)
Query: 1 MFGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
M + + R +I + C R+EKA + + + + D+ TYN++I C+ + +
Sbjct: 375 MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 61 GYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP 110
+ + + G+ PDVV+Y ++I+G R S L +M E G+ P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 216/447 (48%), Gaps = 4/447 (0%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
L + FCK ++E+A + GV P+VVT+N +ID +D + +M
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
E G+ P ++TY+ L+ G TR + + +L EM + G PP+V YN+L+ + G
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
++A + M+ L+ ++T+N ++ G CKN DNA R+ + + GF ++ +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I LC +A + E+ +P TT++ ++ K+ LE+ KG+
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D ++ + G+L EA ++++ G +D VSYNTLI+ C + KL+ A++
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
LDEM K+G + D YT++ILI GL ++ A + + G ++ Y+ ++D
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634
Query: 369 KDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKS 424
K + + F+ M K ++ Y+ ++ C++ RL A +L G+ +
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
Query: 425 AQKAVVDGLRHSGCRREAKKIQSKIRM 451
+++ G+ EAK + ++RM
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRM 721
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 39/473 (8%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
+I V +A R+ A ++ + + G P+V+ YN LID++ + S + I + M
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G+S TYN+LI G +N + LL EML +G + S+ S++ L D
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 466
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIK 190
A R +M+ +++P +++GLCK+ AL ++ GFV + T N L+
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG--- 247
GLC+AG+L A I KE+ G + ++Y T++ C +K L M ++G
Sbjct: 527 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586
Query: 248 --YTF------------------------------DGFGYCTVIAAFVKIGRLKEATDYM 275
YT+ D + Y +I K R +E ++
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
++M++ VQ + V YN LI YC+ G+L A L ++M+ +G + T+T LI G+
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706
Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
++ A+L E M G + N+ Y ++D GK G++ + M K + TY
Sbjct: 707 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 766
Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
+ M+ + + AS+LL + G+ K + G G EA K
Sbjct: 767 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
LL + CK + KA + + G + D T N L+ C+ D + I +
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
G D V+YN+LI+G L + LDEM++ G+ PD ++Y+ L+ LF + K
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
+EA + + D + P T+++M++G CK T+ F + P V YN L
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I+ C++GRL A + +++ G +PN+ TYT+++K + + + M+ +G
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 724
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
+ F Y +I + K+G++ + + +M + V + ++Y +I Y ++G + A
Sbjct: 725 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 784
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNI 338
LL+EM ++G D T+ I G K G +
Sbjct: 785 LLNEMREKGIVPDSITYKEFIYGYLKQGGV 814
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 180/400 (45%), Gaps = 4/400 (1%)
Query: 5 LSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTI 64
L++ N + +CK + + AE ++ + + +G + ++ +I C + FD+
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 65 LNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQ 124
+ M +SP +LI+G ++ S +L+L + L G D + N+L+H L +
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 125 LGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVT 184
GK DEA R+ ++++ ++N +++G C + D A + K G P+ T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 185 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 244
Y+ILI GL ++ A + +G P+ TY+ ++ C + + + G E M
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
K + Y +I A+ + GRL A + E M G+ + +Y +LI ++E
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
A LL +EM +G E + + +T LIDG K G + L M+ N Y ++
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCK 400
+DG + A + M V DS TY ++ K
Sbjct: 771 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 42/365 (11%)
Query: 96 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
+LD+ + G+ P + N L+ L + + + F D++C ++P F +N
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 281
Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
CK + A+++F +++ G P +VT+N +I GL GR A +++ + G P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
ITY+ ++K R ++ +L M +KG+ + Y +I +F++ G L +A +
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH---------- 325
+ MV+ G+ L +YNTLI YCK G+ + A LL EM GF ++ +
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 326 -------------------------TILIDGLCKAG-NIKGARLHLEYMNKIGFDSNLEA 359
T LI GLCK G + K L +++NK GF +
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRT 520
Query: 360 YNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 415
N ++ L + GK+D A + + + V D +Y++++ C K+L A L +
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 416 KSGVR 420
K G++
Sbjct: 581 KRGLK 585
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 41/195 (21%)
Query: 293 LINLYCKEGKLEAAYLLLD----------------------------EMEK--------- 315
LI +YC + K + YL LD E +K
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 266
Query: 316 QGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 375
+G D Y T I+ CK G ++ A M + G N+ +N ++D LG G+ D
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 376 AINVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 431
A E M + TYS +V L +AKR+ A +L K G ++D
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 432 GLRHSGCRREAKKIQ 446
+G +A +I+
Sbjct: 387 SFIEAGSLNKAIEIK 401
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 190/403 (47%), Gaps = 35/403 (8%)
Query: 13 CVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQ------------------ 54
C+C K +EKA+A+ I G++P Y LI+ YC+
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 55 -FVS----------------FDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSL 97
+S D Y I+ M +G P+VV Y +LI +NS ++
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 98 DLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGL 157
+L EM E GI PD++ YNSL+ L + + DEA +M+ L P T+ ++G
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 158 CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNA 217
+ +A + + +++ G +P V LI CK G++ A + + D G +A
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 218 ITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 277
TYT +M F+N K EI M+ KG D F Y +I F K+G +++A+ ++
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 278 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 337
MV +G+ +++ YN L+ +C+ G++E A LLDEM +G + T+ +IDG CK+G+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 380
+ A + M G + Y +VD + ++ AI +F
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 50/449 (11%)
Query: 18 CKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDV 77
C + L+ A I+ + I G P+VV Y LI + Q F +L M+E GI+PD+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 78 VTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQD 137
YNSLI G ++ + + L EM+E G+ P+ ++Y + + + + A++ ++
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 138 M-ICGDLT--------------------PCTA--------------TFNIMLNGLCKNRY 162
M CG L C+A T+ +++NGL KN
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 163 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
D+A +FR ++ G P++ +Y +LI G K G ++ A I E+ + G PN I Y
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
++ R+ + + E+L M KG + YCT+I + K G L EA ++M G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
+ D Y TL++ C+ +E A + K+G LI+ + K G
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGK---TE 783
Query: 343 LHLEYMNKI---GFD----SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTY 391
L E +N++ FD N YN ++D L K+G ++ A +F M+ + TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 392 SSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
+S+++ K R + + +G+
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 4/413 (0%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G++P TY++LID C+ + ++L M G+S D TY+ LI G + +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
L+ EM+ GI + Y+ + + + G ++A +F MI L P + ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
C+ + + ++K V TY ++KG+C +G L A I+KE+ SG PN
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
+ YTT++K +N ++ + +L MK +G D F Y ++I K R+ EA ++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
+MV +G++ + +Y I+ Y + + +A + EM + G +K T LI+ CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYS 392
+ A M G + + Y +++ L K+ K+D A +F M K D F+Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 445
+++ K + AS + ++ G+ ++ G SG +AK++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 39/440 (8%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
++ + CK RLE A++++++ LGV D TY++LID + + DA +++ M
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 71 AGIS-----------------------------------PDVVTYNSLIAGATRNSLLSC 95
GI+ P Y SLI G R +
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 96 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
+LL EM + I ++Y +++ + G D A + ++MI P + ++
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
+N +A+R+ + +++ G P++ YN LI GL KA R+ AR L E+ ++G P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 275
NA TY + ++ + + M+ G + +I + K G++ EA
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 276 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 335
MV G+ D +Y L+N K K++ A + EM +G D +++ +LI+G K
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 336 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTY 391
GN++ A + M + G N+ YN ++ + G+I+ A + + M VK ++ TY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 392 SSMVHNLCKAKRLPSASKLL 411
+++ CK+ L A +L
Sbjct: 701 CTIIDGYCKSGDLAEAFRLF 720
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 163/344 (47%), Gaps = 10/344 (2%)
Query: 19 KANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVV 78
K ++++ AE I + G+ PDV +Y +LI+ + + + +I + M E G++P+V+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 79 TYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDM 138
YN L+ G R+ + + +LLDEM G+ P+ +Y +++ + G EA R+F +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 139 ICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL 198
L P + + +++G C+ + A+ +F G K G +N LI + K G+
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT 782
Query: 199 RTARWILKELGDSGH----APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 254
+L L D PN +TY ++ + + E+ M+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 314
Y +++ + K+GR E ++ + G++ D + Y+ +IN + KEG A +L+D+M
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 315 KQ-----GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGF 353
+ G + T L+ G K G ++ A +E M ++ +
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 184/426 (43%), Gaps = 32/426 (7%)
Query: 36 LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
+G D V + +L D Y + + + + P + L+ R + L
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 96 SLDLLDEMLEMGIPPDVWSYNSLM--HCL---FQLGKPD--EANRVFQDMICGDLTPCTA 148
D+ M+E + DV +Y+ L+ HC QLGK + + F+ TA
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR----------TA 254
Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
T N+ D AL++ + G VP TY++LI GLCK RL A+ +L E+
Sbjct: 255 TLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 268
G + + TY+ ++ + R ++ M G + Y I K G +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 328
++A + M+ G+ +Y +LI YC+E + Y LL EM+K+ YT+ +
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 329 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 384
+ G+C +G++ GA ++ M G N+ Y ++ ++ + A+ V + M+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 385 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 444
D F Y+S++ L KAKR+ A L+ +++G++ A + G + A K
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 445 IQSKIR 450
++R
Sbjct: 544 YVKEMR 549
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 141/330 (42%), Gaps = 43/330 (13%)
Query: 12 ICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREA 71
+ + F K ++KA +I + + G+ P+V+ YNML+ +C+ + +L+ M
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 72 GISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSY---------------- 115
G+ P+ VTY ++I G ++ L+ + L DEM G+ PD + Y
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 116 ------------------NSLMHCLFQLGKPDEANRVFQDMICGDL----TPCTATFNIM 153
N+L++ +F+ GK + V ++ G P T+NIM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 154 LNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGH 213
++ LCK + A +F +Q +P ++TY L+ G K GR + E +G
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 214 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG----FGYC-TVIAAFVKIGRL 268
P+ I Y+ I+ + L ++ M K DG C +++ F K+G +
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931
Query: 269 KEATDYMEQMVTDGVQLDIVSYNTLINLYC 298
+ A ME MV D + LIN C
Sbjct: 932 EVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
P+ VTYN++ID C+ + +A + ++M+ A + P V+TY SL+ G + + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTP-----CTATFNIML 154
DE + GI PD Y+ +++ + G +A + M + +T +L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 155 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 200
+G K + A ++ + + ++P+ T LI C + R
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRV 968
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 2 FGKLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAG 61
FGK + NI + CK LE A+ + ++P V+TY L++ Y +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 62 YTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPD-----VWSYN 116
+ + + AGI PD + Y+ +I + + + +L L+D+M D + +
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLC 158
+L+ ++G+ + A +V ++M+ P +AT ++N C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 198/384 (51%), Gaps = 18/384 (4%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
I + FC+ +RL A +++ ++LG P +VT+ L+ +C ++++ M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
++G P+VV YN+LI G +N L+ +L+LL+EM + G+ DV +YN+L+ L G+
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+A R+ +DM+ + P TF +++ K D A +++ + + P VTYN +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
GLC GRL A+ + G PN +TY T++ + R G+++ M +G+
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D F Y T+I + ++G+L+ A D MV+ V DI+++ L++ C G++E+A +
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 310 LDEMEKQGFECDKY----THTILIDGLCKAGNIKGA-----RLHLEYMNKIGFDSNLEAY 360
D+M E +KY + I+I GLCKA ++ A RL +E G + Y
Sbjct: 409 FDDMR----ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE-----GVKPDARTY 459
Query: 361 NCIVDRLGKDGKIDHAINVFESME 384
++ L K+G A + M+
Sbjct: 460 TIMILGLCKNGPRREADELIRRMK 483
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 210/438 (47%), Gaps = 4/438 (0%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
F + R E A A+ + + LP +V + L+ A ++ +M GIS D
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
+ ++ LI R S LS +L +L +M+++G P + ++ SL+H + + +A +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
M+ P +N +++GLCKN + AL + ++K G ++VTYN L+ GLC +G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
R A +L+++ P+ +T+T ++ + E+ M + + Y
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
++I GRL +A + M + G ++V+YNTLI+ +CK ++ L M +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
GF D +T+ LI G C+ G ++ A +M ++ + ++ L +G+I+ A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 377 INVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 432
+ F+ M + + Y+ M+H LCKA ++ A +L GV+ ++ G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 433 LRHSGCRREAKKIQSKIR 450
L +G RREA ++ +++
Sbjct: 466 LCKNGPRREADELIRRMK 483
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 173/343 (50%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
FC NR+ A +++I ++ G P+VV YN LID C+ + +LN M + G+ D
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VVTYN+L+ G + S + +L +M++ I PDV ++ +L+ + G DEA +++
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
+MI + P T+N ++NGLC + +A + F + G P +VTYN LI G CK
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
+ + + + G + TY T++ + K ++ L+I M + T D +C
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
++ G ++ A + M + IV+YN +I+ CK K+E A+ L + +
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
G + D T+TI+I GLCK G + A + M + G + A
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + C + R A ++ D ++ + PDVVT+ LID + + + D + M +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 71 AGISPDVVTYNSLIAG--------------------------ATRNSLLS--CSLDLLDE 102
+ + P+ VTYNS+I G T N+L+S C ++DE
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 103 MLEM-------GIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
+++ G D+++YN+L+H Q+GK A +F M+ +TP T I+L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
GLC N ++AL F +++ +V YNI+I GLCKA ++ A + L G P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
+A TYT ++ +N + E++ MK +G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 250
G + R A + E+ S P+ + +T ++ R+Y+ + M+ G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 251 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 310
D + + +I F + RL A + +M+ G + IV++ +L++ +C ++ A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 311 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 370
M K G+E + + LIDGLCK G + A L M K G +++ YN ++ L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 371 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 426
G+ A + M + D T+++++ K L A +L ++S V
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 427 KAVVDGLRHSGCRREAKK 444
++++GL G +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 218/481 (45%), Gaps = 37/481 (7%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
K S L N+ + + K R+E + D + G+ P T+N+LI A C DA
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+ + M E G P+ T+ L+ G + L L+LL+ M G+ P+ YN+++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV---- 179
+ G+ D++ ++ + M L P TFN ++ LCK +A R+F ++ ++
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 180 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 239
P +TYN+++KG CK G L A+ + + + ++ + +Y ++ R+ K+ +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 240 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 299
L M KG + Y ++ K+G L +A + M +GV D V+Y L++ YC
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 300 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 359
GK++AA LL EM + + YT IL+ L K G I A L MN+ G+ +
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 360 YNCIVDRLGKDGKIDHAINVFESMEV---------------------------KDSFTYS 392
N IVD L G++D AI + + M V D TYS
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
++++ LCKA R A L + ++ A + H C++ KI S R+
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI----HHFCKQ--GKISSAFRVL 582
Query: 453 K 453
K
Sbjct: 583 K 583
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 219/480 (45%), Gaps = 31/480 (6%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
S + NI + + + +AE ++ G+ P + +YN+L+D C+ TI+
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
M+ G+ PD VTY L+ G + + LL EM+ P+ ++ N L+H L+++
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------- 178
G+ EA + + M T T NI+++GLC + D A+ + +G++ HG
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 179 ----------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 222
+P+L+TY+ L+ GLCKAGR A+ + E+ P+++ Y
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 223 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 282
+ + K +L M++KG Y ++I ++ E M++M G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 283 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 342
+ +I +YNT I C+ K+E A LLDEM ++ + ++ LI+ CK + A+
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 343 LHLEYMNKI-GFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----SFTYSSMVHN 397
E I G L Y+ + + L G++ A + E++ + +F Y +V +
Sbjct: 685 EVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 398 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSK-IRMAKISH 456
LCK L AS +L + G +A V+DGL G ++EA K + MA +
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGE 802
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 206/450 (45%), Gaps = 32/450 (7%)
Query: 2 FGKLSTRLL-NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDA 60
FG L +++ N V +FC+ R + +E ++ G++PD+VT+N I A C+
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 61 GYTILNRMR---EAGIS-PDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYN 116
I + M G+ P+ +TYN ++ G + LL + L + + E + SYN
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 117 SLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKH 176
+ L + GK EA V + M + P ++NI+++GLCK +A + ++++
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 177 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 236
G P+ VTY L+ G C G++ A+ +L+E+ + PNA T ++ ++ +
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 237 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL----------- 285
E+L M KGY D ++ G L +A + ++ M G
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 286 ------------DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLC 333
D+++Y+TL+N CK G+ A L EM + + D + I I C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 334 KAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSF 389
K G I A L+ M K G +LE YN ++ LG +I + + M+ K +
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 390 TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
TY++ + LC+ +++ A+ LL ++ +
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 16/424 (3%)
Query: 36 LGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSC 95
L V+ N + A+ QF L R R P V YN L+ + +
Sbjct: 79 LSVVSIFAKSNHIDKAFPQFQ--------LVRSRFPENKPSVYLYNLLLESCIKERRVEF 130
Query: 96 SLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLN 155
L +M+ GI P +++N L+ L D A +F +M P TF I++
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190
Query: 156 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 215
G CK TD L + ++ G +P V YN ++ C+ GR + +++++ + G P
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
Query: 216 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY----TFDGFGYCTVIAAFVKIGRLKEA 271
+ +T+ + + + K I S M+ Y + Y ++ F K+G L++A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 272 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 331
E + + + SYN + + GK A +L +M +G Y++ IL+DG
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 332 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKD 387
LCK G + A+ + M + G + Y C++ GK+D A ++ + M + +
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 388 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 447
++T + ++H+L K R+ A +LL + G + +VDGL SG +A +I
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 448 KIRM 451
+R+
Sbjct: 491 GMRV 494
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 5/362 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
CK A+ + + + G+ P+V TYN +ID +C F + +L M E I+PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
V+T+N+LI+ + + L + L DEML I PD +YNS+++ + + D+A +F
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 425
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
M +P TFN +++ C+ + D +++ R + + G V TYN LI G C+
Sbjct: 426 LMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 481
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 256
L A+ + +E+ G P+ IT ++ N K + LE+ ++ D Y
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 257 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 316
+I K ++ EA D + GV+ D+ +YN +I+ +C + + A +L +M+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 317 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 376
G E D T+ LI G KAG I + + M GF + + D L DG++D +
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
Query: 377 IN 378
+
Sbjct: 661 FS 662
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 8/406 (1%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N + C R+ +A A++ + G+ DVVTY +++ C+ + +L++M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
E I PDVV Y+++I ++ S + L EMLE GI P+V++YN ++ G+
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
+A R+ +DMI ++ P TFN +++ K A ++ + P+ VTYN +I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G CK R A K + D +P+ +T+ TI+ R ++ G+++L + R+G
Sbjct: 409 YGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+ Y T+I F ++ L A D ++M++ GV D ++ N L+ +C+ KLE A L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+ ++ + D + I+I G+CK + A + G + +++ YN ++
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
I A +F M+ D+ TY++++ KA + + +L+
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 207/443 (46%), Gaps = 23/443 (5%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYC---------------Q 54
NI + FC ++L + + +LG PDVVT+N L+ C
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 55 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
F + ++M E G++P V+T+N+LI G + + L+++M+ G+ DV +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
Y ++++ + ++G A + M + P ++ +++ LCK+ + +A +F +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 175 KHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYK 234
+ G P + TYN +I G C GR A+ +L+++ + P+ +T+ ++ + K
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 235 LGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 294
++ M + D Y ++I F K R +A + M + D+V++NT+I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTII 439
Query: 295 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 354
++YC+ +++ LL E+ ++G + T+ LI G C+ N+ A+ + M G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 355 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 410
+ N ++ ++ K++ A+ +FE +++ D+ Y+ ++H +CK ++ A L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 411 LLSCLKSGVRILKSAQKAVVDGL 433
S GV ++ G
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGF 582
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 200/449 (44%), Gaps = 30/449 (6%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLP-DVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N + F + NR + A ++ + + +P ++ ++N+LI +C + ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLY-RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
+ G PDVVT+N+L+ G +S +L L M+E G
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-------------------- 208
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
EA +F M+ LTP TFN ++NGLC A + + G ++VTY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G+CK G ++A +L ++ ++ P+ + Y+ I+ ++ + + S M KG
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
+ F Y +I F GR +A + M+ + D++++N LI+ KEGKL A L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
DEM + D T+ +I G CK A+ + M ++ +N I+D +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 370 DGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSA 425
++D + + + V ++ TY++++H C+ L +A L + GV
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 426 QKAVVDGLRHSGCRREAKKIQSKIRMAKI 454
++ G + EA ++ I+M+KI
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKI 533
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)
Query: 55 FVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWS 114
F S D + M + V N +I R + ++ L +M IP +++S
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 115 YNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQ 174
+N L+ C K + F + P TFN +L+GLC AL +F +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 175 KHGFV---------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
+ GF+ P ++T+N LI GLC GR+ A ++ ++ G + +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y TI+ + K L +LS M+ D Y +I K G +A +M+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI- 338
G+ ++ +YN +I+ +C G+ A LL +M ++ D T LI K G +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 339 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 398
+ +L E +++ F + YN ++ K + D A ++F+ M D T+++++
Sbjct: 384 EAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 399 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKISH 456
C+AKR+ +LL + G+ A + L H C + + ISH
Sbjct: 443 CRAKRVDEGMQLLREISRRGL----VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N + +C+A R+++ ++ + R G++ + TYN LI +C+ + +A + M
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 70 EAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPD 129
G+ PD +T N L+ G N L +L+L + + I D +YN ++H + + K D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 130 EANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI 189
EA +F + + P T+N+M++G C +A +F ++ +G P+ TYN LI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAIT 219
+G KAG + + ++ E+ +G + +A T
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 190/406 (46%), Gaps = 5/406 (1%)
Query: 11 NICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMRE 70
N + + +R E AEAI D +G TY+ I C+ FD +L+ M
Sbjct: 48 NRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMET 107
Query: 71 AGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDE 130
G PD+ +N + R + + ++ M++ G PDV SY L++ LF+ GK +
Sbjct: 108 LGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTD 167
Query: 131 ANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVP-ELVTYNILI 189
A ++ MI ++P ++ GLC R D A M K V V YN LI
Sbjct: 168 AVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Query: 190 KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYT 249
G CKAGR+ A + + G P+ +TY ++ + N K +++ M R G
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287
Query: 250 FDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLL 309
D + Y ++ ++ + ++M + + D+VSY+TLI +C+ AY L
Sbjct: 288 LDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRL 347
Query: 310 LDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGK 369
+EM ++G + T+T LI + GN A+ L+ M ++G + Y I+D L K
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 370 DGKIDHAINVFESM---EV-KDSFTYSSMVHNLCKAKRLPSASKLL 411
G +D A VF M E+ D+ +Y+S++ LC++ R+ A KL
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 209/435 (48%), Gaps = 11/435 (2%)
Query: 14 VCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGI 73
+ CK + + +A++ D LG +PD+ +N+ +D C+ M + G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 74 SPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEA-N 132
PDVV+Y LI G R ++ ++++ + M+ G+ PD + +L+ L K D A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 133 RVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGL 192
V +++ + T +N +++G CK + A + + K G P+LVTYN+L+
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 193 CKAGRLRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFD 251
L+ A ++ E+ SG +A +Y ++K C + K ++ M+ +G+ D
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-D 324
Query: 252 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
Y T+I F + ++A E+M G+ +++V+Y +LI + +EG A LLD
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 312 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
+M + G D+ +T ++D LCK+GN+ A M + + +YN ++ L + G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 372 KIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQK 427
++ AI +FE M+ K D T+ ++ L + K+L +A K+ + G + +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL----DR 500
Query: 428 AVVDGLRHSGCRREA 442
V D L + C A
Sbjct: 501 DVSDTLIKASCSMSA 515
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 42/383 (10%)
Query: 10 LNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMR 69
N+ + C+ N++ A ++ G PDVV+Y +LI+ + I N M
Sbjct: 117 FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 70 EAGISPD------------------------------------VVTYNSLIAGATRNSLL 93
+G+SPD V YN+LI+G + +
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236
Query: 94 SCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIM 153
+ L M ++G PD+ +YN L++ + A V +M+ + ++N +
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
Query: 154 LNGLCKNRYTDNALR-MFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 212
L C+ + D M + ++ GF ++V+Y+ LI+ C+A R A + +E+ G
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 213 HAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEAT 272
N +TYT+++K R + ++L M G + D Y T++ K G + +A
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415
Query: 273 DYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC--DKYTHTILID 330
M+ + D +SYN+LI+ C+ G++ A L ++M +G EC D+ T +I
Sbjct: 416 GVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM--KGKECCPDELTFKFIIG 473
Query: 331 GLCKAGNIKGARLHLEYMNKIGF 353
GL + + A + M GF
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKGF 496
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 35/283 (12%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLI-------------- 49
KLST + N + FCKA R+EKAEA+ ++G PD+VTYN+L+
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 50 ------------DAY---------CQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGAT 88
DAY C+ D Y + + E DVV+Y++LI
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFC 336
Query: 89 RNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTA 148
R S + L +EM + G+ +V +Y SL+ + G A ++ M L+P
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 149 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 208
+ +L+ LCK+ D A +F + +H P+ ++YN LI GLC++GR+ A + +++
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 209 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 251
P+ +T+ I+ R +K ++ M KG+T D
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL 173
+Y S + L + G D A +VF +M + +N + L + + A ++ +
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 174 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKY 233
+ GF TY+ I GLCK + +L ++ G P+ + + R K
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 234 KLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTL 293
++ M ++G D Y +I + G++ +A + M+ GV D + L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 294 INLYCKEGKLEAAY-LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 352
+ C K++ AY ++ +E++ + + LI G CKAG I+ A YM+KIG
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 353 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCK 400
+ +L YN +++ + + A V M D+++Y+ ++ C+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
+ Y I L K+G + A + E+ S + + Y + R +++L I
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
MK G++ F Y I+ K+ + + M T G DI ++N ++L C+E K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
+ A M ++G E D ++TILI+GL +AG + A M + G + +A
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 363 IVDRLGKDGKIDHAINV----FESMEVK-DSFTYSSMVHNLCKAKRLPSASKL 410
+V L K+D A + +S VK + Y++++ CKA R+ A L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 4/412 (0%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYT 63
KL + + + + K+ L A + + G+ P+VVTY +LI CQ +
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 64 ILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLF 123
+ ++ + G+ P +VTY+SLI G + L L ++M++MG PPDV Y L+ L
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 124 QLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV 183
+ G A R M+ + FN +++G C+ D AL++FR + +G P++
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 184 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 243
T+ +++ GRL A ++ + G P+A+ Y T++ ++ K +GL++ M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 244 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 303
+R + D VI K R+++A+ + ++ ++ DIV+YNT+I YC +L
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 304 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 363
+ A + + ++ F + T TILI LCK ++ GA M + G N Y C+
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 364 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 411
+D K I+ + +FE M+ K +YS ++ LCK R+ A+ +
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 156/319 (48%), Gaps = 2/319 (0%)
Query: 4 KLSTRLLNICVCTFCKANRLEKAEAII-IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGY 62
+L+ + N + +C+ NR ++A + + GI G+ PDV T+ ++ +
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 63 TILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCL 122
+ RM + G+ PD + Y +LI ++ + L L D M I D+ N ++H L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 123 FQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL 182
F+ + ++A++ F ++I G + P T+N M+ G C R D A R+F L+ F P
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 183 VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 242
VT ILI LCK + A + + + G PNA+TY +M ++ + ++
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
M+ KG + Y +I K GR+ EAT+ Q + + D+V+Y LI YCK G+
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 303 LEAAYLLLDEMEKQGFECD 321
L A LL + M + G + D
Sbjct: 792 LVEAALLYEHMLRNGVKPD 810
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 178/431 (41%), Gaps = 74/431 (17%)
Query: 20 ANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVT 79
+++E A ++ + G P+VVT+ LI+ +C+ D + + M + GI PD++
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 80 YNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMI 139
Y++LI G + +L L + L G+ DV ++S + + G A+ V++ M+
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 140 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 199
C G P +VTY ILIKGLC+ GR+
Sbjct: 384 C-----------------------------------QGISPNVVTYTILIKGLCQDGRIY 408
Query: 200 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 259
A + ++ G P+ +TY++++ + + G + M + GY D Y ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 260 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK-------------------- 299
K G + A + +M+ ++L++V +N+LI+ +C+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 300 ---------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLH 344
EG+LE A L M K G E D + LID CK
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 345 LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI----NVFESMEVKDSFTYSSMVHNLCK 400
+ M + +++ N ++ L K +I+ A N+ E D TY++M+ C
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 401 AKRLPSASKLL 411
+RL A ++
Sbjct: 649 LRRLDEAERIF 659
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 156/392 (39%), Gaps = 61/392 (15%)
Query: 114 SYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNI----------------MLNGL 157
S+ ++ H L + G D A++VF +MI T FN+ ++
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMI----TNRGKDFNVLGSIRDRSLDADVCKFLMECC 156
Query: 158 CKNRYTDNALRMFRGLQKHGFV-PELVTYNIL---------------IKGLCKAG----R 197
C+ D AL +F + G V P+ Y +L LC+ G
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 198 LRTARWILKELGDSGHAPNAITY-TTIMKCCFR------NRKYK--------LGLEILSA 242
+ ++L L G A+ + +M+ FR N+ K + +LS
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSL 276
Query: 243 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 302
+ G + +CT+I F K G + A D + M G++ D+++Y+TLI+ Y K G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 303 LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 362
L + L + +G + D + ID K+G++ A + + M G N+ Y
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 363 IVDRLGKDGKIDHAINVF-----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 417
++ L +DG+I A ++ ME TYSS++ CK L S L +K
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGME-PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 418 GVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 449
G +VDGL G A + K+
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 217/461 (47%), Gaps = 61/461 (13%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
C A+++E A + + R G++ DV TY +++D++C+ + N MRE G +P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM--HCLFQLGKPDEANRV 134
VVTY +LI + +S + +L + ML G P++ +Y++L+ HC + G+ ++A ++
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC--KAGQVEKACQI 610
Query: 135 FQDMICGDLT-----------------PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHG 177
F+ M CG P T+ +L+G CK+ + A ++ + G
Sbjct: 611 FERM-CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 178 FVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGL 237
P + Y+ LI GLCK G+L A+ + E+ + G TY++++ F+ ++ L
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 238 EILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLY 297
++LS M + Y +I K+G+ EA M+ M G Q ++V+Y +I+ +
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 298 CKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM--------- 348
GK+E LL+ M +G + T+ +LID CK G + A LE M
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 349 ---------------------NKIGFDSN---LEAYNCIVDRLGKDGKIDHAINVFESME 384
++IG D L Y ++D L K +++ A+ + E +
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 385 ------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 419
V S TY+S++ +LC A ++ +A +L K GV
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 16/393 (4%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
C A + EKA ++I + I G +PD TY+ +++ C + + + M+ G+ D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
V TY ++ + L+ + +EM E+G P+V +Y +L+H + K AN +F+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPEL-------------- 182
M+ P T++ +++G CK + A ++F + VP++
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 183 --VTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 240
VTY L+ G CK+ R+ AR +L + G PN I Y ++ + K E+
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 241 SAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE 300
+ M G+ + Y ++I + K+ R A+ + +M+ + ++V Y +I+ CK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 301 GKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAY 360
GK + AY L+ ME++G + + T+T +IDG G I+ LE M G N Y
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 361 NCIVDRLGKDGKIDHAINVFESMEVKDSFTYSS 393
++D K+G +D A N+ E M+ T+++
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 198/424 (46%), Gaps = 28/424 (6%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G P +N L+ AYC Y +L +M + G P V YN LI G+ S +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLN 425
Query: 97 LDLLD-------EMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTAT 149
DLLD EML G+ + + +S CL GK ++A V ++MI P T+T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
++ +LN LC + A +F +++ G V ++ TY I++ CKAG + AR E+
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 269
+ G PN +TYT ++ + +K E+ M +G + Y +I K G+++
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 270 EATDYMEQM-----VTD-----------GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 313
+A E+M V D + ++V+Y L++ +CK ++E A LLD M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 314 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 373
+G E ++ + LIDGLCK G + A+ M++ GF + L Y+ ++DR K +
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 374 DHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAV 429
D A V M + Y+ M+ LCK + A KL+ + G + A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 430 VDGL 433
+DG
Sbjct: 786 IDGF 789
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 201/441 (45%), Gaps = 26/441 (5%)
Query: 16 TFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISP 75
+ CK + +A ++ +PD V Y LI C+ F+ LNRMR P
Sbjct: 279 SLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 76 DVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVF 135
+VVTY++L+ G L +L+ M+ G P +NSL+H G A ++
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 136 QDMI-CGDLTPCTATFNIMLNGLCKNRYT------DNALRMFRGLQKHGFVPELVTYNIL 188
+ M+ CG + P +NI++ +C ++ + D A + + + G V + +
Sbjct: 396 KKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
+ LC AG+ A +++E+ G P+ TY+ ++ K +L + MKR G
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 308
D + Y ++ +F K G +++A + +M G ++V+Y LI+ Y K K+ A
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 309 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLG 368
L + M +G + T++ LIDG CKAG ++ A E M +++ Y D
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD--- 631
Query: 369 KDGKIDHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKA 428
++ E + TY +++ CK+ R+ A KLL + G + A
Sbjct: 632 ------------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 429 VVDGLRHSGCRREAKKIQSKI 449
++DGL G EA+++++++
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEM 700
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 167/340 (49%), Gaps = 4/340 (1%)
Query: 40 PDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDL 99
P+VVTY L+D +C+ + +L+ M G P+ + Y++LI G + L + ++
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 100 LDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCK 159
EM E G P +++Y+SL+ F++ + D A++V M+ P + M++GLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 160 NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAIT 219
TD A ++ + +++ G P +VTY +I G G++ T +L+ +G G APN +T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 220 YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 279
Y ++ C +N + +L MK+ + GY VI F K E+ ++++
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874
Query: 280 TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY--THTILIDGLCKAGN 337
D + Y LI+ K +LE A LL+E+ Y T+ LI+ LC A
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 338 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 377
++ A M K G ++++ ++ L ++ KI A+
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 193/431 (44%), Gaps = 20/431 (4%)
Query: 23 LEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNS 82
L+ AE + + GV+ + + + C ++ ++++ M G PD TY+
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 83 LIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGD 142
++ S + + L +EM G+ DV++Y ++ + G ++A + F +M
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 143 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 202
TP T+ +++ K + A +F + G +P +VTY+ LI G CKAG++ A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 203 WIL----------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 246
I K+ D+ PN +TY ++ ++ + + ++L AM +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 247 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 306
G + Y +I K+G+L EA + +M G + +Y++LI+ Y K + + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 307 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 366
+L +M + + +T +IDGLCK G A ++ M + G N+ Y ++D
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 367 LGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 422
G GKI+ + + E M K + TY ++ + CK L A LL ++
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 423 KSAQKAVVDGL 433
+ + V++G
Sbjct: 849 TAGYRKVIEGF 859
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 173/411 (42%), Gaps = 48/411 (11%)
Query: 46 NMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLE 105
N+L+ +C+ SF L R+++ P TYN LI + L + + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 106 MGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDN 165
+ D ++ + L ++GK EA + + + P T + +++GLC+ +
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEE 320
Query: 166 ALRMFRGLQKHGFVPELVTY-----------------------------------NILIK 190
A+ ++ +P +VTY N L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 191 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMK 244
C +G A +LK++ GH P + Y ++ ++ L + S M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 245 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 304
G + + G+ ++A + +M+ G D +Y+ ++N C K+E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 305 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
A+LL +EM++ G D YT+TI++D CKAG I+ AR M ++G N+ Y ++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 365 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 411
K K+ +A +FE+M + + TYS+++ CKA ++ A ++
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 9/269 (3%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
+ K R + A ++ + P+VV Y +ID C+ D Y ++ M E G P+
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLM-HCLFQLGKPDEANRVF 135
VVTY ++I G + L+LL+ M G+ P+ +Y L+ HC + G D A+ +
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC-KNGALDVAHNLL 837
Query: 136 QDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKA 195
++M TA + ++ G N+ +L + + + P L Y +LI L KA
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 196 GRLRTARWILKELG--DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 253
RL A +L+E+ + + TY ++++ K + ++ S M +KG +
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Query: 254 GYCTVIAAFVKIGRLKEA---TDYMEQMV 279
+C++I + ++ EA D++ MV
Sbjct: 956 SFCSLIKGLFRNSKISEALLLLDFISHMV 984
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 132/297 (44%), Gaps = 4/297 (1%)
Query: 17 FCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
CK +L++A+ + + G + TY+ LID Y + D +L++M E +P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQ 136
VV Y +I G + + L+ M E G P+V +Y +++ +GK + + +
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 137 DMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAG 196
M + P T+ ++++ CKN D A + +++ + Y +I+G K
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-- 861
Query: 197 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG-- 254
+ +L E+G AP Y ++ + ++ ++ L +L + T +
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921
Query: 255 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 311
Y ++I + +++ A +M GV ++ S+ +LI + K+ A LLLD
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 124/342 (36%), Gaps = 87/342 (25%)
Query: 150 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 209
N+++ C+N AL L+ F P TYN LI+ KA RL +A I +E+
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 210 DSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 267
+ + T CF K+G E L+ ++ + + D Y +I+ +
Sbjct: 263 LANLRMDGFTLR-----CFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL 317
Query: 268 LKEATDYMEQMVTDGVQLDIVSY-----------------------------------NT 292
+EA D++ +M ++V+Y N+
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 293 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG--------------------- 331
L++ YC G AY LL +M K G + ILI
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 332 --------------------LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 371
LC AG + A + M GF + Y+ +++ L
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 372 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 409
K++ A +FE M+ V D +TY+ MV + CKA + A K
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 19 KANRLEKAEAII--IDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPD 76
KA RLE A ++ + ++ TYN LI++ C + + + + M + G+ P+
Sbjct: 894 KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIP 109
+ ++ SLI G RNS +S +L LLD + M P
Sbjct: 954 MQSFCSLIKGLFRNSKISEALLLLDFISHMVCP 986
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 203/419 (48%), Gaps = 4/419 (0%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
S + N+ + CK R+ AE + + + +LP ++TYN LID YC+ + + + +
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
RM+ I P ++T+N+L+ G + ++ + ++L EM ++G PD ++++ L
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
K + A V++ + + T +I+LN LCK + A + G VP V Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
N +I G C+ G L AR ++ + G P+ + Y +++ + + + ++ MK
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
KG + Y +I + + + D +++M +G ++VSY TLIN CK KL
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD 365
A ++ +ME +G + +LIDG C G I+ A + M K G + NL YN ++D
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 366 RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 420
L GK+ A ++ + K D FTY+S++ A + L +SG++
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 198/421 (47%), Gaps = 10/421 (2%)
Query: 37 GVLPDVVTYNMLIDAYCQFVSFDAGYTILNRMREAGISPDVVTYNSLIAGATRNSLLSCS 96
G+ P + +L+D + F + + E+ P Y I A + S +
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 97 LDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKPDEANRVFQDMICGDLTPCTATFNIMLNG 156
L+L + M I P V+ YN L+ L + + ++A ++F +M+ L P T+N +++G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 157 LCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPN 216
CK + + ++ ++ P L+T+N L+KGL KAG + A +LKE+ D G P+
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 217 AITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYME 276
A T++ + N K + L + G + + ++ A K G++++A + +
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 277 QMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 336
+ + G+ + V YNT+I+ YC++G L A + ++ MEKQG + D + LI C+ G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 337 NIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYS 392
++ A + M G ++E YN ++ G+ + D ++ + ME + + +Y
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 393 SMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMA 452
++++ LCK +L A + GV ++DG G KI+ R +
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG------KIEDAFRFS 552
Query: 453 K 453
K
Sbjct: 553 K 553
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 170/357 (47%), Gaps = 6/357 (1%)
Query: 9 LLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTILNRM 68
+ N + +C+ L A I + G+ PD + YN LI +C+ + +N+M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 69 REAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGKP 128
+ G+SP V TYN LI G R D+L EM + G P+V SY +L++CL + K
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 129 DEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNIL 188
EA V +DM ++P +N++++G C ++A R + + K G LVTYN L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 189 IKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 248
I GL G+L A +L E+ G P+ TY +++ + + + MKR G
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 249 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAY 307
Y +I+ KE + E++ + ++ D++ YN +++ Y G +E A+
Sbjct: 631 KPTLKTYHLLISLCT-----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 364
L +M ++ DK T+ LI G K G + R ++ MN + + YN IV
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%)
Query: 68 MREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQLGK 127
+R GI P + L+ + ++++ +LE P + Y + +L
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 128 PDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNI 187
+ +F M + P +N++++GLCK + ++A ++F + +P L+TYN
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 188 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 247
LI G CKAG + + + + P+ IT+ T++K F+ + +L MK G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 248 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 307
+ D F + + + + + A E V GV+++ + + L+N CKEGK+E A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 308 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 367
+L +G ++ + +IDG C+ G++ GAR+ +E M K G + AYNC++ R
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 368 GKDGKIDHAINVFESMEVK 386
+ G++++A M++K
Sbjct: 435 CELGEMENAEKEVNKMKLK 453
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 4/344 (1%)
Query: 6 STRLLNICVCTFCKANRLEKAEAIIIDGIRLGVLPDVVTYNMLIDAYCQFVSFDAGYTIL 65
S NI + + + +K I+ + G +P+VV+Y LI+ C+ +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 66 NRMREAGISPDVVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPPDVWSYNSLMHCLFQL 125
M + G+SP V YN LI G + + EML+ GI ++ +YN+L+ L
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 126 GKPDEANRVFQDMICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY 185
GK EA + ++ L P T+N +++G + ++ +++ G P L TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 186 NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR 245
++LI K G T R G+ P+ + Y ++ C + + + M
Sbjct: 638 HLLISLCTKEGIELTERL----FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 246 KGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEA 305
K D Y ++I +K+G+L E +++M ++ + +YN ++ +C+ +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 306 AYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 349
AY+ EM+++GF D L+ GL + K A + + MN
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 163/394 (41%), Gaps = 37/394 (9%)
Query: 77 VVTYNSLIAGATRNSLLSCSLDLLDEMLEMGIPP--DVWSYNSL--MHCLFQLGKPDEAN 132
V + ++ + L S S D E PP V L + L Q + + A
Sbjct: 16 TVKFTDSVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETAR 75
Query: 133 RVFQDMICGDLTPCTAT----------------------FNIMLNGLCKNRYTDNALRMF 170
V ++ D TP + +++LN +++ A +F
Sbjct: 76 GVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN---ESKMISEAADLF 132
Query: 171 RGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRN 230
L+ G P + +L+ L K + R + + +S P+ Y ++ +
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 231 RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSY 290
GLE+ + MK F Y +I K R+ +A ++M+ + +++Y
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 291 NTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK 350
NTLI+ YCK G E ++ + + M+ E T L+ GL KAG ++ A L+ M
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 351 IGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK-DSFTYSSMVHNLCKAKRLPS 406
+GF + ++ + D + K + A+ V+E+ VK +++T S +++ LCK ++
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 407 ASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
A ++L + G+ + ++DG CR+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGY----CRK 402
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,701,314
Number of Sequences: 539616
Number of extensions: 6775876
Number of successful extensions: 32085
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 20922
Number of HSP's gapped (non-prelim): 3222
length of query: 456
length of database: 191,569,459
effective HSP length: 121
effective length of query: 335
effective length of database: 126,275,923
effective search space: 42302434205
effective search space used: 42302434205
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)